User contributions for Rhead
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13 March 2012
- 18:0618:06, 13 March 2012 diff hist +361 Post-Release-Checklist →UniProtKB: updated with info from Benoit Bely at UniProt
24 February 2012
- 04:1604:16, 24 February 2012 diff hist +348 QAing UCSC Genes →QAing the many related tables: example loop for getting table row counts
- 04:0604:06, 24 February 2012 diff hist +165 QAing UCSC Genes →QAing the Gene Set: one more note from Jim about checking kgXref
- 04:0204:02, 24 February 2012 diff hist +244 UCSC Genes Staging Process added section for unused tables
- 03:5903:59, 24 February 2012 diff hist +458 QAing UCSC Genes Added FASTA Alignments section
- 03:3503:35, 24 February 2012 diff hist +44 UCSC Genes Staging Process →Download page: push the cds fasta files
- 03:3303:33, 24 February 2012 diff hist −34 UCSC Genes Staging Process →Databases: removed redundant link to ucsc genes tables
- 03:1503:15, 24 February 2012 diff hist +225 QAing UCSC Genes →QAing the Gene Set: Added featureBits note.
- 03:1403:14, 24 February 2012 diff hist −2 m QAing UCSC Genes →QAing the uniProt and proteome databases
- 03:1303:13, 24 February 2012 diff hist +186 QAing UCSC Genes →QAing the uniProt and proteome databases: formatting; adding note about symlinks
- 02:2202:22, 24 February 2012 diff hist +57 UCSC Genes Staging Process →uniProt and Proteome databases: added note to push the READMEs
- 02:2002:20, 24 February 2012 diff hist +7 m UCSC Genes Staging Process →Update the hgcentral database
- 02:1602:16, 24 February 2012 diff hist +225 QAing UCSC Genes →QAing the many related tables: list of tables that should have same counts
- 02:0902:09, 24 February 2012 diff hist −2 UCSC Genes Staging Process →update isPcr: changed header name
- 01:5801:58, 24 February 2012 diff hist +711 UCSC Genes Staging Process split pcr target into hgwbeta and RR sections
- 01:2001:20, 24 February 2012 diff hist +786 QAing UCSC Genes added PCR Target section
- 00:5000:50, 24 February 2012 diff hist −412 UCSC Genes Staging Process Moved intro information from here to the QAing page
- 00:4600:46, 24 February 2012 diff hist −64 QAing UCSC Genes →Tables Related to UCSC Genes That are Separate tracks: noted that exoniphy will no longer be built
- 00:4200:42, 24 February 2012 diff hist −133 QAing UCSC Genes removed links to other ucsc genes pages from bottom of page
- 00:4100:41, 24 February 2012 diff hist +274 QAing UCSC Genes Moved intro information here from the Staging page
- 00:3200:32, 24 February 2012 diff hist −209 UCSC Genes Staging Process →Post-Release: Removed section now that all ucsc genes wiki pages are linked on every page
- 00:3100:31, 24 February 2012 diff hist +151 Post-Release-Checklist added "wiki pages about known genes" section
- 00:3000:30, 24 February 2012 diff hist +147 UCSC Genes Staging Process added "wiki pages about known genes" section
- 00:2900:29, 24 February 2012 diff hist +149 UCSC Genes tables added "wiki pages about known genes" section
- 00:2600:26, 24 February 2012 diff hist +66 QAing UCSC Genes →wiki pages about known genes: reordered links, added note about staging link
- 00:1100:11, 24 February 2012 diff hist −509 Post-Release-Checklist removed details about hgcentral, otherOrgs.ra and uniProt (they're in the QAing and Staging pages now), and added announcement section
23 February 2012
- 22:3522:35, 23 February 2012 diff hist −221 Post-Release-Checklist →Exoniphy: removed this section per Ann and Hiram.
- 21:0421:04, 23 February 2012 diff hist +1,106 QAing UCSC Genes Added a section for QAing uniProt and proteome databases
- 20:1120:11, 23 February 2012 diff hist +232 QAing UCSC Genes →QAing the many related tables: Added note to check Old UCSC Genes, Alt Events and blastTab tables.
- 20:0620:06, 23 February 2012 diff hist 0 UCSC Genes Staging Process →Files for Searching: changed hg18 to <db>
- 20:0320:03, 23 February 2012 diff hist +103 UCSC Genes Staging Process →Databases and Tables: added hgNearOk=1 note
- 20:0220:02, 23 February 2012 diff hist +33 UCSC Genes Staging Process →Searching: clarified that this was for human and mouse
- 19:4819:48, 23 February 2012 diff hist +67 UCSC Genes Staging Process →Releasing to the public website: added headers, moved push of search files up
- 19:4119:41, 23 February 2012 diff hist +26 UCSC Genes Staging Process →Staging on hgwbeta: added headers
- 19:4019:40, 23 February 2012 diff hist +41 UCSC Genes Staging Process →Data Involved: added headers; added note about alt events only being on human and mouse
- 19:2919:29, 23 February 2012 diff hist −172 QAing UCSC Genes →wiki pages about known genes: turned links into wiki links
- 06:5806:58, 23 February 2012 diff hist +855 UCSC Genes Staging Process →Releasing to the public website: added notes about symlinks, pushing the tables, isPcr
- 06:3906:39, 23 February 2012 diff hist 0 m QAing UCSC Genes No edit summary
- 06:3806:38, 23 February 2012 diff hist +23 QAing UCSC Genes →Links to Other UCSC Genes Genomewiki Pages: added ucsc genes tables link
- 06:3706:37, 23 February 2012 diff hist −17 QAing UCSC Genes collapsted the re-build problem section into the QAing the related tables section
- 06:3306:33, 23 February 2012 diff hist +337 QAing UCSC Genes added suggestions for dealing with redmine tickets
- 06:2806:28, 23 February 2012 diff hist +781 QAing UCSC Genes Added sections for a common rebuild pitfall and for QAing the many related tables
- 06:1306:13, 23 February 2012 diff hist +252 QAing UCSC Genes Made "Comparison to previous build" section specifically about human and mouse; added instruction to get help from developer/jim
- 06:0406:04, 23 February 2012 diff hist −41 QAing UCSC Genes →Determining the tables involved: fixed link
- 06:0206:02, 23 February 2012 diff hist −1,224 QAing UCSC Genes Removed HGGeneCheck instructions. This takes a week and failed to find errors in many runs, including several real errors for rn4.
- 06:0006:00, 23 February 2012 diff hist +23 Post-Release-Checklist →Add the link to the protein database /goldenPath/proteinDB/proteinsYYMMDD/database/: clarified downloads.html link, changed title of section
- 05:5405:54, 23 February 2012 diff hist +44 m Post-Release-Checklist →Update the metadata in hgcentral: clarified what hgNearOk does
- 05:5305:53, 23 February 2012 diff hist +2 Post-Release-Checklist →Update the metadata in hgcentral: removed hgPbOk and defaultDb instructions
- 05:4005:40, 23 February 2012 diff hist +21 Post-Release-Checklist →Exon Primer Links: clarified that exonPrimer is only for human and mouse
- 03:0503:05, 23 February 2012 diff hist −3 Post-Release-Checklist →HGNC Links to us: Elspeth Bruford at HNGC informed me that Michael Lush is no longer with the project.