Assembly QA Part 3 BETA Steps: Revision history

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curprev 21:4121:41, 12 April 2022‎ Daniel talk contribs‎ 26,902 bytes −1‎ →‎Beta: copyHgcentral: liftOverChain: manual move: Fixing Someone else's Typo

curprev 17:3117:31, 6 April 2022‎ Daniel talk contribs‎ 26,903 bytes −102‎ →‎Beta: copyHgcentral: liftOverChain: manual move: Removing Duplicate row

curprev 20:2320:23, 17 November 2020‎ Gerardo talk contribs‎ 27,005 bytes +68‎ →‎Beta: Re push any tables if needed after checking updateTimes: Added helpful notes to not run genbank steps.

curprev 18:5118:51, 27 August 2020‎ Daniel talk contribs‎ 26,937 bytes +90‎ →‎Beta: Push gbdb files: Note to avoid * chars

curprev 23:3423:34, 24 August 2020‎ Daniel talk contribs‎ 26,847 bytes −24‎ →‎Beta: Do a make public in trackDb for your assembly
curprev 23:1823:18, 24 August 2020‎ Daniel talk contribs‎ 26,871 bytes −19‎ →‎Beta: joinerCheck table times

curprev 00:2800:28, 22 August 2020‎ Daniel talk contribs‎ 26,890 bytes −5‎ →‎Beta: copyHgcentral: liftOverChain: manual move
curprev 00:2000:20, 22 August 2020‎ Daniel talk contribs‎ 26,895 bytes +84‎ No edit summary
curprev 00:1400:14, 22 August 2020‎ Daniel talk contribs‎ 26,811 bytes −47‎ →‎OPTION 3: Use the bigPush.sh script, push tables in a file
curprev 00:1000:10, 22 August 2020‎ Daniel talk contribs‎ 26,858 bytes +55‎ →‎Beta: Push all tables for your assembly to beta

curprev 22:4022:40, 21 August 2020‎ Daniel talk contribs‎ 26,803 bytes +19‎ →‎Beta: Compare assembly.push list with dev mySQL table list
curprev 22:3822:38, 21 August 2020‎ Daniel talk contribs‎ 26,784 bytes +71‎ →‎Beta: Remove certain tables from your assembly push list

curprev 16:2716:27, 5 June 2019‎ Lrnassar talk contribs‎ 27,154 bytes −30‎ →‎Beta: GenBank updates: check Genbank update times
curprev 16:2416:24, 5 June 2019‎ Lrnassar talk contribs‎ 27,184 bytes +29‎ →‎Beta: Turn on GenBank updates add:commit:push

curprev 23:5223:52, 4 June 2019‎ Daniel talk contribs‎ 27,155 bytes −28‎ hgwbeta
curprev 22:5322:53, 4 June 2019‎ Lrnassar talk contribs‎ 27,183 bytes −9‎ →‎Beta: Remove certain tables from your assembly push list

curprev 16:1316:13, 3 June 2019‎ Daniel talk contribs‎ 27,192 bytes +115‎ →‎Beta: Re push any tables if needed after checking updateTimes: Adding list of tables on dev not on beta.

curprev 21:4321:43, 31 May 2019‎ Daniel talk contribs‎ 27,077 bytes −3‎ →‎Beta: Double check gbdb files
curprev 21:1721:17, 31 May 2019‎ Daniel talk contribs‎ 27,080 bytes +2‎ →‎Beta: Push all tables to other assemblies to beta
curprev 21:0821:08, 31 May 2019‎ Daniel talk contribs‎ 27,078 bytes +12‎ →‎Beta: Compare assembly.push list with dev mySQL table list
curprev 21:0721:07, 31 May 2019‎ Daniel talk contribs‎ 27,066 bytes −8‎ →‎Beta: Compare assembly.push list with dev mySQL table list

curprev 20:4520:45, 2 May 2019‎ Ccpowell talk contribs‎ m 27,032 bytes +195‎ Mentioning GenBank updates quarterly vs. nightly

curprev 17:2617:26, 6 February 2019‎ Lrnassar talk contribs‎ m 26,837 bytes +1‎ →‎Beta: Double check gbdb files

curprev 00:2500:25, 15 November 2018‎ Jairo talk contribs‎ 26,836 bytes +1‎ No edit summary
curprev 00:2200:22, 15 November 2018‎ Jairo talk contribs‎ 26,835 bytes −23‎ No edit summary

curprev 23:3523:35, 13 November 2018‎ Daniel talk contribs‎ 26,858 bytes +93‎ →‎Beta: Check that your assembly is listed in hgwdev.dbs: Clarify replacement vs adding to the list.

curprev 23:3023:30, 8 November 2018‎ Daniel talk contribs‎ 26,765 bytes −13‎ →‎Beta: Check that your assembly is listed in hgwdev.dbs: Changing this to the proper dbs file, as instructed by Braney
curprev 21:5921:59, 8 November 2018‎ Daniel talk contribs‎ 26,778 bytes +161‎ →‎Beta: Push gbdb files: Including grep shortcut

curprev 17:4917:49, 31 October 2018‎ Ccpowell talk contribs‎ 26,388 bytes +330‎ →‎Beta: copyHgcentral: liftOverChain: manual move

curprev 15:5815:58, 23 October 2018‎ Jairo talk contribs‎ 26,058 bytes +153‎ →‎Beta: Remove release tag for big vcf track types
curprev 15:5715:57, 23 October 2018‎ Jairo talk contribs‎ 25,905 bytes +3‎ →‎Beta: Check release tags: compare dev and beta tracks side by side

curprev 21:3421:34, 3 October 2018‎ Daniel talk contribs‎ 25,902 bytes +4‎ →‎Beta: Check that your assembly is listed in align.dbs: Making server location more clear
curprev 20:3720:37, 3 October 2018‎ Jairo talk contribs‎ 25,898 bytes +50‎ →‎Beta: joinerCheck table times

curprev 16:3916:39, 1 October 2018‎ Daniel talk contribs‎ 25,848 bytes +102‎ →‎Beta: Do chain net quick qa or full qa: Making broken script comments more clear

curprev 17:3317:33, 28 September 2018‎ Daniel talk contribs‎ 25,746 bytes +38‎ →‎Beta: GenBank updates: check Genbank update times: Slight changes to make more clear.

curprev 19:0519:05, 26 September 2018‎ Lrnassar talk contribs‎ 25,977 bytes −11‎ Removing and outdated install-rr command
curprev 00:1300:13, 26 September 2018‎ Lrnassar talk contribs‎ 25,988 bytes +127‎ →‎Beta: copyHgcentral: liftOverChain: manual move

curprev 16:5316:53, 29 August 2018‎ Daniel talk contribs‎ 25,582 bytes +2‎ Undo revision 4725 by Daniel (talk)
curprev 00:2200:22, 29 August 2018‎ Daniel talk contribs‎ 25,580 bytes −2‎ Link changed from .soe or .cse to .gi

curprev 21:2821:28, 14 November 2017‎ Cath talk contribs‎ m 25,582 bytes +1‎ →‎Beta: Push gbdb files
curprev 17:1317:13, 14 November 2017‎ Cath talk contribs‎ m 25,581 bytes +21‎ No edit summary

curprev 23:1123:11, 13 November 2017‎ Cath talk contribs‎ m 25,560 bytes +9‎ →‎Beta: Remove certain tables from your assembly push list

curprev 21:2821:28, 9 November 2017‎ Cath talk contribs‎ m 25,551 bytes +1‎ →‎Beta: Re push any tables if needed after checking updateTimes
curprev 21:1621:16, 9 November 2017‎ Cath talk contribs‎ m 25,550 bytes +354‎ →‎Beta: Do chain net quick qa or full qa

curprev 23:2623:26, 8 November 2017‎ Cath talk contribs‎ m 25,196 bytes −3‎ →‎Beta: GenBank updates: make libs and run make
curprev 23:2423:24, 8 November 2017‎ Cath talk contribs‎ m 25,199 bytes +5‎ →‎Beta: GenBank updates: make libs and run make

curprev 00:5800:58, 7 November 2017‎ Cath talk contribs‎ m 25,194 bytes −1‎ →‎Beta: Check that your assembly is listed in align:dbs

curprev 18:4818:48, 6 November 2017‎ Cath talk contribs‎ m 25,195 bytes +57‎ →‎Beta: Remove certain tables from your assembly push list
curprev 18:0618:06, 6 November 2017‎ Cath talk contribs‎ m 25,138 bytes +12‎ →‎Beta: Remove certain tables from your assembly push list

curprev 17:0417:04, 2 November 2017‎ Cath talk contribs‎ m 22,537 bytes −7‎ →‎Beta: Re push any tables if needed after checking updateTimes
curprev 16:5716:57, 2 November 2017‎ Cath talk contribs‎ m 22,544 bytes +196‎ →‎Beta: Re push any tables if needed after checking updateTimes

curprev 17:5117:51, 24 October 2017‎ Cath talk contribs‎ m 22,348 bytes 0‎ →‎Beta: Re push any tables if needed after checking updateTimes
curprev 17:4917:49, 24 October 2017‎ Cath talk contribs‎ m 22,348 bytes 0‎ →‎Beta: Re push any tables if needed after checking updateTimes
curprev 17:2317:23, 24 October 2017‎ Cath talk contribs‎ m 22,348 bytes +313‎ →‎Beta: Turn on GenBank updates add:commit:push
curprev 17:2317:23, 24 October 2017‎ Cath talk contribs‎ 22,035 bytes −312‎ →‎Beta: Check that your assembly is listed in align:dbs

curprev 23:4223:42, 20 October 2017‎ Cath talk contribs‎ m 22,347 bytes +136‎ →‎Beta: Check Tools: PCR

curprev 22:0922:09, 19 October 2017‎ Cath talk contribs‎ m 22,211 bytes +72‎ →‎Beta: Check that your assembly is listed in align:dbs
curprev 19:0119:01, 19 October 2017‎ Cath talk contribs‎ 22,139 bytes +167‎ →‎Beta: Make clean table lists for pushing

curprev 20:4620:46, 1 September 2017‎ Cath talk contribs‎ 21,972 bytes +2‎ →‎Beta: Push all tables for your assembly to beta

curprev 23:4123:41, 23 May 2017‎ Cath talk contribs‎ m 23,160 bytes −43‎ No edit summary

curprev 22:4422:44, 5 May 2017‎ Cath talk contribs‎ m 23,203 bytes −85‎ No edit summary

curprev 17:4017:40, 24 April 2017‎ Cath talk contribs‎ m 23,288 bytes +129‎ →‎Beta: Review chain/net track QA wiki

curprev 22:2822:28, 21 April 2017‎ Cath talk contribs‎ m 23,159 bytes +18‎ →‎Beta: Turn on GenBank updates
curprev 21:5821:58, 21 April 2017‎ Cath talk contribs‎ m 23,141 bytes +548‎ →‎Beta: Review chain/net track QA wiki

curprev 00:1500:15, 12 April 2017‎ Cath talk contribs‎ m 5,264 bytes +111‎ →‎Tracks: Push to hgwbeta

curprev 23:4623:46, 11 April 2017‎ Cath talk contribs‎ 5,153 bytes +193‎ No edit summary
curprev 23:4323:43, 11 April 2017‎ Cath talk contribs‎ m 4,960 bytes +193‎ No edit summary
curprev 23:4323:43, 11 April 2017‎ Cath talk contribs‎ m 4,767 bytes +567‎ No edit summary
curprev 23:4123:41, 11 April 2017‎ Cath talk contribs‎ m 4,200 bytes +3,212‎ No edit summary

curprev 21:4621:46, 3 November 2016‎ Cath talk contribs‎ 754 bytes −37‎ No edit summary

curprev 20:2520:25, 25 October 2016‎ Cath talk contribs‎ 803 bytes −37‎ No edit summary

curprev 22:3122:31, 19 September 2016‎ Cath talk contribs‎ 484 bytes +484‎ Created page with "<div style="border: 2px solid #A3B1BF; padding: .5em 1em 1em 1em; border-top: none; background-color: #FFFBF1; color: #000;"> == Welcome to the '''Assembly QA Part 1: BETA Steps..."

Assembly QA Part 3 BETA Steps: Revision history

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Assembly QA Part 3 BETA Steps: Revision history

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