KnownGene: Difference between revisions

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== Setting environment variables ==  
== Setting environment variables ==
 
The environment variables used in the build are set in the script buildEnv.sh.  All the other scripts assume that this script has been sourced in the current shell.
 
== Extracting Gencode data ==  
== Extracting Gencode data ==  
== Building initial knownGene table ==  
== Building initial knownGene table ==  
== Adding primary reference tables ==  
== Adding primary reference tables ==  
== Building final knownGene core tables ==
== Building final knownGene core tables ==

Revision as of 17:23, 26 July 2021

Setting environment variables

The environment variables used in the build are set in the script buildEnv.sh. All the other scripts assume that this script has been sourced in the current shell.

Extracting Gencode data

Building initial knownGene table

Adding primary reference tables

Building final knownGene core tables