User contributions for AngieHinrichs
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8 November 2019
- 18:2218:22, 8 November 2019 diff hist −45 Demo sandbox →Claimed sandbox table: demo5 is up for grabs
4 October 2019
- 21:1121:11, 4 October 2019 diff hist +51 Demo sandbox →Claimed sandbox table
25 June 2019
- 16:1416:14, 25 June 2019 diff hist −116 Demo sandbox →Claimed sandbox table: demo5 is free
22 March 2019
- 21:2621:26, 22 March 2019 diff hist +106 Demo sandbox →Claimed sandbox table: demo5 (Angie, hgSession user data)
16 January 2019
- 22:2222:22, 16 January 2019 diff hist −49 Demo sandbox →Claimed sandbox table: releasing demo5
27 August 2018
- 18:2218:22, 27 August 2018 diff hist +59 Demo sandbox →htdocs: Removing the exception for demo3 and demo5 because all demo* have htdocs-demo* on the new hgwdev.
- 18:1918:19, 27 August 2018 diff hist −250 Demo sandbox →What about htdocs?: Update: on the new hgwdev, all demo* hosts have htdocs-demo*.
- 18:1218:12, 27 August 2018 diff hist −24 Demo sandbox →Claimed sandbox table: Removing "(no htdocs)" qualifiers from demo3 and demo5 because they do have htdocs on the new hgwdev.
12 June 2018
- 17:4917:49, 12 June 2018 diff hist +49 Demo sandbox →Claimed sandbox table: claiming demo5
- 17:4717:47, 12 June 2018 diff hist 0 m Demo sandbox →Viewing your demo: changing cse.ucsc.edu --> soe.ucsc.edu
12 January 2017
- 00:1300:13, 12 January 2017 diff hist −126 Demo sandbox →Claimed sandbox table: Releasing demo3 and demo5
9 June 2016
- 17:0617:06, 9 June 2016 diff hist +137 Demo sandbox →Claimed sandbox table: claimed demo3 and demo5 for hgLogin testing; updated demo6
11 January 2016
- 18:2418:24, 11 January 2016 diff hist +28 m HgTracks multi-region changes Added empty section for hgTracks.js changes. current
9 January 2016
- 01:1301:13, 9 January 2016 diff hist +2,284 HgTracks multi-region changes →Additions to spaceSaver module
- 00:0000:00, 9 January 2016 diff hist +48 m HgTracks multi-region changes →Code changes: added section 'Additions to struct spaceSaver'
8 January 2016
- 23:5623:56, 8 January 2016 diff hist +400 HgTracks multi-region changes →struct window *currentWindow
- 23:4223:42, 8 January 2016 diff hist +424 HgTracks multi-region changes →struct window *windows
- 23:3123:31, 8 January 2016 diff hist +259 HgTracks multi-region changes →struct window *windows
- 23:1823:18, 8 January 2016 diff hist +31 m HgTracks multi-region changes →struct convertRange
- 23:1423:14, 8 January 2016 diff hist +589 HgTracks multi-region changes →struct convertRange
- 21:4921:49, 8 January 2016 diff hist +299 HgTracks multi-region changes →struct window: where it's used
- 21:4121:41, 8 January 2016 diff hist +687 HgTracks multi-region changes →struct window
- 21:2721:27, 8 January 2016 diff hist +26 m HgTracks multi-region changes →struct virtRegion
- 21:2421:24, 8 January 2016 diff hist +171 HgTracks multi-region changes →struct virtChromRegionPos
- 21:2121:21, 8 January 2016 diff hist +213 HgTracks multi-region changes →struct positionMatch
- 21:1021:10, 8 January 2016 diff hist +24 m HgTracks multi-region changes →struct virtChromRegionPos
- 21:0521:05, 8 January 2016 diff hist +131 HgTracks multi-region changes →struct virtChromRegionPos
- 21:0021:00, 8 January 2016 diff hist +54 HgTracks multi-region changes →struct virtRegion: Adding internal link to the section on how these are initialized... will it work?
- 20:4720:47, 8 January 2016 diff hist +2,734 HgTracks multi-region changes →Additions to struct track
- 19:0819:08, 8 January 2016 diff hist +260 m HgTracks multi-region changes →New global variables: formatting only -- wrapping variables in tt tags.
- 19:0619:06, 8 January 2016 diff hist −1 m HgTracks multi-region changes →New cart variables: use "pop-up" consistently
- 19:0419:04, 8 January 2016 diff hist +21 m HgTracks multi-region changes →emPadding
- 19:0319:03, 8 January 2016 diff hist +21 m HgTracks multi-region changes →emAltHighlight
- 19:0219:02, 8 January 2016 diff hist +2 m HgTracks multi-region changes →Multi-region display UI: typo fix
7 January 2016
- 22:1522:15, 7 January 2016 diff hist +5,065 HgTracks multi-region changes Time to pick up kids -- getting there, but still a long ways to go.
- 20:4920:49, 7 January 2016 diff hist +2,471 m HgTracks multi-region changes Saving work in progress
- 19:3719:37, 7 January 2016 diff hist +725 m HgTracks multi-region changes break for lunch
- 18:5518:55, 7 January 2016 diff hist +4,576 N HgTracks multi-region changes Notes from code review of Galt's initial implementation; this is incomplete but I'm saving it to avoid the unlikely scenario of losing what I've added so far.
15 September 2015
- 20:0220:02, 15 September 2015 diff hist +152 Training new Browser Engineers →kent src coding standards & libraries overview: Added note about jkent-c.emacs
- 19:5719:57, 15 September 2015 diff hist +67 N File:Jkent-c.emacs Chuck Sugnet's emacs config for using Jim Kent's C formatting rules current
- 19:2419:24, 15 September 2015 diff hist +7 m Training new Browser Engineers →kent src coding standards & libraries overview: added date to my presentation
- 19:2319:23, 15 September 2015 diff hist +80 m Training new Browser Engineers →kent src coding standards & libraries overview: errAbort often
- 19:0519:05, 15 September 2015 diff hist +3,372 Training new Browser Engineers →kent src coding standards & libraries overview: Added overview and suggested reading (slides)
- 17:1517:15, 15 September 2015 diff hist +109 Training new Browser Engineers →debugging tools
22 January 2015
- 01:0901:09, 22 January 2015 diff hist +3,216 UI with ReactJS and ImmutableJS →ImModel: monolithic UI state model using ImmutableJS: Reorganized a bit and added some how-to-subclass examples. Need more on architecture. Whole document needs more on interfaces. current
17 January 2015
- 01:0701:07, 17 January 2015 diff hist +69 UI with ReactJS and ImmutableJS →The new architecture: Moving things around a bit
- 01:0101:01, 17 January 2015 diff hist +272 UI with ReactJS and ImmutableJS →ImmutableJS: mention the major benefits
- 00:5300:53, 17 January 2015 diff hist +28 UI with ReactJS and ImmutableJS →Bootstrapping: the CGI prints minimal HTML: include JS in the title; its bootstrapping is important too!
- 00:5100:51, 17 January 2015 diff hist +360 UI with ReactJS and ImmutableJS →The new architecture: Mention CGI's role in the introduction.
- 00:3600:36, 17 January 2015 diff hist +101 UI with ReactJS and ImmutableJS →The new architecture: Moved some intro text into subsections.
- 00:2400:24, 17 January 2015 diff hist +1,434 UI with ReactJS and ImmutableJS →Passing user actions to ImModel: Event handlers, update, path, optional data.
16 January 2015
- 23:5023:50, 16 January 2015 diff hist +1,475 UI with ReactJS and ImmutableJS →Using UI state from ImModel: Described appState, use of ImmutableJS methods and passing down branches.
- 23:1923:19, 16 January 2015 diff hist +2,943 UI with ReactJS and ImmutableJS →The new architecture: Added introduction.
- 22:2922:29, 16 January 2015 diff hist +88 m UI with ReactJS and ImmutableJS →AJAX and JQuery: manipulating the DOM: forgot to mention the wacky back button behavior
- 22:2722:27, 16 January 2015 diff hist +639 UI with ReactJS and ImmutableJS →Bootstrapping: the CGI prints minimal HTML: Just scripts and divs now, after the nav bar.
- 22:1622:16, 16 January 2015 diff hist +157 UI with ReactJS and ImmutableJS →ImmutableJS: Added link to video from Brian.
- 22:1322:13, 16 January 2015 diff hist +1,137 UI with ReactJS and ImmutableJS →The Flux architecture: why not?: Flux is too fancy for our purposes.
- 21:5421:54, 16 January 2015 diff hist +55 UI with ReactJS and ImmutableJS →JSX: HTML-ish with the power of JS: Adding React doc link.
- 21:5321:53, 16 January 2015 diff hist −2 UI with ReactJS and ImmutableJS →Lifecycle methods of React components: Changing "Lifecycle" to "Special", since lifecycle refers more specifically to componentWill*, componentDid* and shouldComponentUpdate.
- 21:5121:51, 16 January 2015 diff hist +368 UI with ReactJS and ImmutableJS →Lifecycle methods of React components: Adding React doc link
- 21:4621:46, 16 January 2015 diff hist +70 UI with ReactJS and ImmutableJS →React mixins: adding link to React doc
- 21:4521:45, 16 January 2015 diff hist +176 UI with ReactJS and ImmutableJS →Simplicity of top-down render, made efficient: Added links from Brian that got me thinking about React
13 January 2015
- 01:1301:13, 13 January 2015 diff hist +2,785 UI with ReactJS and ImmutableJS added a bit of background
- 00:0100:01, 13 January 2015 diff hist +3,429 UI with ReactJS and ImmutableJS →The CGI speaks JSON now
12 January 2015
- 21:1321:13, 12 January 2015 diff hist +987 N UI with ReactJS and ImmutableJS initial outline
20 November 2014
- 18:4818:48, 20 November 2014 diff hist +20 m ExonMostlyDesignMeeting 11-19-14 →A. Horizontal option: Keep logic very similar to now: couple minor clarifications current
- 18:4418:44, 20 November 2014 diff hist +205 ExonMostlyDesignMeeting 11-19-14 Added photos of whiteboard & Galt's notes
- 18:3818:38, 20 November 2014 diff hist +134 N File:1119141503 Galt.jpg Galt's drawing of alt-in-the-middle whiteboard drawing (erased before whiteboard photos) from exon-mostly design meeting Nov. 19, 2014 current
- 18:3318:33, 20 November 2014 diff hist +62 N File:1119141503 right.jpg Right whiteboard from exon-mostly design meeting Nov. 19, 2014 current
- 18:3318:33, 20 November 2014 diff hist +61 N File:1119141504 left.jpg Left whiteboard from exon-mostly design meeting Nov. 19, 2014 current
- 18:0618:06, 20 November 2014 diff hist +3 m ExonMostlyDesignMeeting 11-19-14 →Recommendations: typo fix
19 November 2014
- 23:2323:23, 19 November 2014 diff hist +3,660 N ExonMostlyDesignMeeting 11-19-14 Created page with "= Options for how many features to support = == Only parts from one range == "exon mostly" == Allow mult chromosome pieces and ordering, all same strand == Then we could also ..."
9 September 2014
- 19:1619:16, 9 September 2014 diff hist +1,733 ExonMostlyInitialDesignMeeting Added 'what we didn't talk about' section with questions raised by Braney & Max after the meeting. current
- 19:1019:10, 9 September 2014 diff hist +4,705 ExonMostlyInitialDesignMeeting Some higher-level issues, things that didn't make it onto the whiteboard, and follow-on thoughts from the initial meeting.
5 September 2014
- 18:4118:41, 5 September 2014 diff hist +2,518 N ExonMostlyInitialDesignMeetingWhiteboard Angie's transcription of whiteboard photos -- [?] where I'm not sure that I read a word correctly. current
- 18:1218:12, 5 September 2014 diff hist +373 N ExonMostlyInitialDesignMeeting At this point just pointing to ExonMostlyInitialDesignMeetingWhiteboard which I'm about to add...
- 17:5417:54, 5 September 2014 diff hist +81 N File:14 09 03 exonMostlyDesignMtg 2.jpg whiteboard notes from "exon-mostly" display design meeting, Sep. 3 2014 (2 of 2) current
- 17:5317:53, 5 September 2014 diff hist +81 N File:14 09 03 exonMostlyDesignMtg 1.jpg whiteboard notes from "exon-mostly" display design meeting, Sep. 3 2014 (1 of 2) current
11 November 2013
- 20:0020:00, 11 November 2013 diff hist 0 m QA scripts →ENCODE QA scripts: moving getTrackReferences into alphabetical order
- 19:5919:59, 11 November 2013 diff hist −4 QA scripts →qaAddTrackReferences: this was renamed to addTrackReferences
12 March 2012
- 17:3517:35, 12 March 2012 diff hist +328 VariantAnnotationTool →High-level interfaces: annoGrator.h: Updating with more details about core objects. current
10 March 2012
- 00:2800:28, 10 March 2012 diff hist −1 VariantAnnotationTool →Integrators: Base class does the "generic" functionality.
- 00:2500:25, 10 March 2012 diff hist +289 VariantAnnotationTool →Who's going to do what?: Updating with what Brian and I are working on now.
9 March 2012
- 23:3523:35, 9 March 2012 diff hist −672 VariantAnnotationTool →Input modules: For most data types, we don't need type-specific streamers; downstream modules use autoSql to get smarts about data types.
22 February 2012
- 17:5917:59, 22 February 2012 diff hist +1,060 Make your own virtual space →Keep it current:: Now that we use Git, this may not be advisable anymore.
- 17:2817:28, 22 February 2012 diff hist +325 Make your own virtual space →Prepare for the making of your CGIs: Remove the bit about making a symlink for js since Larry fixed that (#7025). Improved instructions for creating ~/.hg.conf (Does that belong on this page?)
14 February 2012
- 00:4000:40, 14 February 2012 diff hist +88 m VariantAnnotationTool →Input modules: oops, forgot GAF and BAM in streamer list
- 00:3200:32, 14 February 2012 diff hist +211 VariantAnnotationTool →Shared git branch: Oops, git push doesn't stick to the current branch like git pull does.
13 February 2012
- 23:4523:45, 13 February 2012 diff hist +1,170 VariantAnnotationTool →Implementation plan: Adding sections that list subclasses that will actually do the work
- 19:5519:55, 13 February 2012 diff hist 0 m VariantAnnotationTool →command line: Capitalize title to make it look more like its own section, as it is, and less like a subsection of Web UI.
- 19:5419:54, 13 February 2012 diff hist +80 VariantAnnotationTool →CGI: Change section name to Web UI
- 19:5119:51, 13 February 2012 diff hist +101 VariantAnnotationTool →Command line mode: Updating to describe config.ra (cant' stuff all that into command-line options IMO).
- 18:1518:15, 13 February 2012 diff hist +355 VariantAnnotationTool →Implementation plan: overview: command line first while web UI design happens in parallel
- 18:0718:07, 13 February 2012 diff hist +915 VariantAnnotationTool →Implementation plan: who's going to do what?: Subsections, updates to annoGrator, shared git branch.
8 February 2012
- 19:2719:27, 8 February 2012 diff hist +16 VariantAnnotationTool Moved Name section down
7 February 2012
- 23:2023:20, 7 February 2012 diff hist +1,533 VariantAnnotationTool →Implementation plan: who's going to do what?: Proposing object hierarchy, leaving all the hard parts to subclasses.
- 22:4122:41, 7 February 2012 diff hist +775 VariantAnnotationTool →command line: Strawman config.ra.
- 19:4719:47, 7 February 2012 diff hist +4 m VariantAnnotationTool →Novel variant calls from sequencing experiment: David's suggestion: mention VCF before mentioning BAM
6 February 2012
- 17:2817:28, 6 February 2012 diff hist +54 VariantAnnotationTool →Links to Similar Tools: added NCBI's Variation Reporter Tool
- 17:2417:24, 6 February 2012 diff hist +14 m VariantAnnotationTool →Output: mention ranking
- 17:2017:20, 6 February 2012 diff hist +298 VariantAnnotationTool →Input: Mention annotation inputs as well.
- 17:1317:13, 6 February 2012 diff hist +48 m VariantAnnotationTool →Implementation plan: who's going to do what?
- 17:1217:12, 6 February 2012 diff hist +17 m VariantAnnotationTool →Command line mode: clarification: most code will be in libs.
3 February 2012
- 18:2318:23, 3 February 2012 diff hist +125 VariantAnnotationTool →Output: Added a couple options from design meeting
25 January 2012
- 23:1223:12, 25 January 2012 diff hist +31 m VariantAnnotationTool →Input: wording tweak
- 23:0923:09, 25 January 2012 diff hist +451 VariantAnnotationTool →Input: Moved BAM and pileup into "maybe later", to focus on variant call inputs. Replaced question about indels/MNPs with Types of Variation section.
18 January 2012
- 22:1222:12, 18 January 2012 diff hist +913 VariantAnnotationTool →Introduction
- 21:3421:34, 18 January 2012 diff hist +18 m VariantAnnotationTool Added introduction section.
- 21:0921:09, 18 January 2012 diff hist +44 VariantAnnotationTool →Main page
- 21:0221:02, 18 January 2012 diff hist +130 VariantAnnotationTool →List of rs IDs
- 21:0121:01, 18 January 2012 diff hist +1,025 VariantAnnotationTool Added MLQ requests section. →Novel variant calls from sequencing experiment: -- draft.
- 19:1819:18, 18 January 2012 diff hist +1,294 N VariantAnnotationTool Template design doc for proposed Variant Annotation Tool, from Ann's suggestions (Redmine #6152), with some strawman contents
