User contributions for Daniel
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27 August 2020
- 18:5118:51, 27 August 2020 diff hist +90 Assembly QA Part 3 BETA Steps →Beta: Push gbdb files: Note to avoid * chars
- 18:4118:41, 27 August 2020 diff hist +91 Assembly QA Part 4 RR Steps →RR: Push /gbdb files to the RR
- 17:4617:46, 27 August 2020 diff hist +73 Assembly QA Part 4 RR Steps Correcting gbdb push error
- 00:4200:42, 27 August 2020 diff hist +5 Assembly QA Part 4 RR Steps →RR: Push /gbdb files to the RR
24 August 2020
- 23:4423:44, 24 August 2020 diff hist −79 Assembly QA Part 4 RR Steps →RR: Push /gbdb files to the RR
- 23:3423:34, 24 August 2020 diff hist −24 Assembly QA Part 3 BETA Steps →Beta: Do a make public in trackDb for your assembly
- 23:1823:18, 24 August 2020 diff hist −19 Assembly QA Part 3 BETA Steps →Beta: joinerCheck table times
22 August 2020
- 00:2800:28, 22 August 2020 diff hist −5 Assembly QA Part 3 BETA Steps →Beta: copyHgcentral: liftOverChain: manual move
- 00:2000:20, 22 August 2020 diff hist +84 Assembly QA Part 3 BETA Steps No edit summary
- 00:1400:14, 22 August 2020 diff hist −47 Assembly QA Part 3 BETA Steps →OPTION 3: Use the bigPush.sh script, push tables in a file
- 00:1000:10, 22 August 2020 diff hist +55 Assembly QA Part 3 BETA Steps →Beta: Push all tables for your assembly to beta
21 August 2020
- 22:4022:40, 21 August 2020 diff hist +19 Assembly QA Part 3 BETA Steps →Beta: Compare assembly.push list with dev mySQL table list
- 22:3822:38, 21 August 2020 diff hist +71 Assembly QA Part 3 BETA Steps →Beta: Remove certain tables from your assembly push list
- 22:0222:02, 21 August 2020 diff hist +54 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks
- 22:0122:01, 21 August 2020 diff hist +61 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks
29 July 2020
- 21:5821:58, 29 July 2020 diff hist −27 Assembly QA Part 1 DEV Steps →Dev: Compare chrom sizes
- 21:5421:54, 29 July 2020 diff hist −50 Assembly QA Part 1 DEV Steps →Dev: Compare chrom sizes
- 18:3518:35, 29 July 2020 diff hist +255 New track checklist Added note about trackQaHelper script noRM
21 July 2020
- 18:1218:12, 21 July 2020 diff hist +25 New track checklist →Check Data in API: Noting exceptions
16 July 2020
- 19:4419:44, 16 July 2020 diff hist +155 New track checklist →Push to hgwbeta: Adding command to supercede bigPush
9 July 2020
- 17:5617:56, 9 July 2020 diff hist −8 Monitoring Tasks Replacing Conner in the monitoring task to note outages No RM
26 June 2020
- 19:0519:05, 26 June 2020 diff hist +71 New track checklist →Ensure there is a Data Access Section
21 May 2020
- 17:5917:59, 21 May 2020 diff hist +238 New track checklist →Announce on indexNews, newsArch, Genome-announce, FB, Twitter
- 17:5717:57, 21 May 2020 diff hist +29 New track checklist →Push Request
20 May 2020
- 23:3623:36, 20 May 2020 diff hist +212 New track checklist →Announce on indexNews, newsArch, Genome-announce, FB, Twitter: Pennant icon info addition
7 May 2020
- 17:3917:39, 7 May 2020 diff hist +2 Usage Statistics →Using generateUsageStats.py
- 17:3817:38, 7 May 2020 diff hist +47 Usage Statistics →Using generateUsageStats.py: Adding full path for programs
15 April 2020
- 21:3921:39, 15 April 2020 diff hist +336 Assembly QA Part 1 DEV Steps →Dev: Gateway: Check default position: Adding note about hgPbOk
1 April 2020
- 17:1017:10, 1 April 2020 diff hist +87 New track checklist →Downloads: Adding not about Table download files
6 March 2020
- 01:0201:02, 6 March 2020 diff hist +118 New track checklist →Push to hgwbeta: Adding gbdbPush #24825
6 February 2020
20 January 2020
- 23:3423:34, 20 January 2020 diff hist +10 Public Hub QA →1) Add Hub to the hubPublic table on hgwdev
- 23:3123:31, 20 January 2020 diff hist 0 Public Hub QA →1) Add Hub to the hubPublic table on hgwdev
28 November 2019
- 00:5100:51, 28 November 2019 diff hist +561 Public Hub QA Adding section about users wanting to change their URL #24290
21 November 2019
- 22:4622:46, 21 November 2019 diff hist +162 Genome-preview machine →Updating Genome-Preview with pushDevToPreview: Adding note about my previewUpdate script
4 November 2019
- 23:0023:00, 4 November 2019 diff hist −1,561 Public Hub QA →1) Rebuild and push hub search files and tables: Removing section on udcCache and hubCrawl push with Chris's oversight #18870
24 October 2019
- 21:5121:51, 24 October 2019 diff hist +146 New track checklist →Announce on indexNews, newsArch, Genome-announce, FB, Twitter
4 September 2019
- 19:0419:04, 4 September 2019 diff hist +83 CGI Testing →TrackCheck: Adding note about TrackCheckLog alias.
29 August 2019
- 00:1600:16, 29 August 2019 diff hist +83 CGI Testing →main page testing: Updating some testing info
15 July 2019
- 18:0318:03, 15 July 2019 diff hist −275 New track checklist →joinerCheck: Adding noTimes option to the command, adding more info. #23792
11 July 2019
- 16:4716:47, 11 July 2019 diff hist +26 New track checklist →Track type-specific QA: Adding Gencode QA link
8 July 2019
- 22:2922:29, 8 July 2019 diff hist −8 New track checklist →Announce release on indexNews, newsArch, Genome-announce, FB, Twitter
- 22:2922:29, 8 July 2019 diff hist +513 New track checklist Adding note to announce track release.
17 June 2019
- 23:0423:04, 17 June 2019 diff hist −3 Public Hub QA Undo revision 5220 by Daniel (talk)
- 22:3722:37, 17 June 2019 diff hist +3 Public Hub QA →1) Rebuild and push hub search files and tables: Changing push template from hgnfs1 to hgwbeta after machine swap.
6 June 2019
- 00:0600:06, 6 June 2019 diff hist +7 Assembly QA Part 4 RR Steps →RR: Edit credits:html and add:commit:push: Fixing path
5 June 2019
- 16:3516:35, 5 June 2019 diff hist +206 Assembly QA Part 4 RR Steps →RR: Check that autodump is working: Adding copy paste link
4 June 2019
- 23:5823:58, 4 June 2019 diff hist +11 Checking RR status through hgTracksRandom hgwbeta current
- 23:5723:57, 4 June 2019 diff hist −8 Old ENCODE QA hgwbeta current
- 23:5723:57, 4 June 2019 diff hist −28 Outdated instructions for releasing an assembly hgwbeta current
- 23:5623:56, 4 June 2019 diff hist −2 Ensembl QA hgwbeta current
- 23:5623:56, 4 June 2019 diff hist −14 GRC Patch Release hgwbeta current
- 23:5523:55, 4 June 2019 diff hist −4 UCSC Genes Staging Process hgwbeta
- 23:5523:55, 4 June 2019 diff hist −2 QAing Gencode Genes hgwbeta current
- 23:5423:54, 4 June 2019 diff hist −4 Email templates hgwbeta current
- 23:5423:54, 4 June 2019 diff hist −10 Requests for liftOver files hgwbeta
- 23:5323:53, 4 June 2019 diff hist −2 Assembly QA Part 4 RR Steps hgwbeta
- 23:5223:52, 4 June 2019 diff hist −28 Assembly QA Part 3 BETA Steps hgwbeta
- 23:5123:51, 4 June 2019 diff hist −4 HgTablesTest details hgwbeta
- 23:5123:51, 4 June 2019 diff hist −6 Monitoring Tasks Notes hgwbeta
- 23:5123:51, 4 June 2019 diff hist −6 PushQ new user hgwbeta current
- 23:5023:50, 4 June 2019 diff hist −8 Public Hub QA hgwbeta
- 23:5023:50, 4 June 2019 diff hist −2 QA scripts hgwbeta
- 23:4923:49, 4 June 2019 diff hist −2 QAing UCSC Genes hgwbeta
- 23:4923:49, 4 June 2019 diff hist −6 Conservation Track QA hgwbeta
- 23:4823:48, 4 June 2019 diff hist −20 Chains and Nets QA hgwbeta
- 23:4823:48, 4 June 2019 diff hist −4 New track checklist hgwbeta
- 23:4823:48, 4 June 2019 diff hist −2 Replacing old tables with new ones hgwbeta current
- 23:4723:47, 4 June 2019 diff hist −2 Pushing trackDb hgwbeta
- 23:4723:47, 4 June 2019 diff hist −2 ENCODE QA Checklist hgwbeta current
- 23:4623:46, 4 June 2019 diff hist −6 ENCODE QA hgwbeta current
- 23:4023:40, 4 June 2019 diff hist −2 CGI Testing mysqlbeta -> hgwbeta
- 23:4023:40, 4 June 2019 diff hist −4 BlastTabs Changing mysqlbeta to hgwbeta current
- 23:1223:12, 4 June 2019 diff hist −2 Assembly QA Part 4 RR Steps →RR: copyHgcentral: liftOverChain: manual move: Changing mysqlbeta to hgwbeta
- 19:0119:01, 4 June 2019 diff hist +46 Assembly QA Part 4 RR Steps →RR: Request push: hgdownload files: Adding caution statement.
3 June 2019
- 16:5516:55, 3 June 2019 diff hist +33 Assembly QA Part 4 RR Steps →RR: Check that tables do not need to be pushed again: Adding what Table differences are okay.
- 16:1316:13, 3 June 2019 diff hist +115 Assembly QA Part 3 BETA Steps →Beta: Re push any tables if needed after checking updateTimes: Adding list of tables on dev not on beta.
1 June 2019
- 00:0300:03, 1 June 2019 diff hist +334 Assembly QA Part 4 RR Steps →RR: Check that tables do not need to be pushed again: Correcting tables not to push list
31 May 2019
- 23:4723:47, 31 May 2019 diff hist −7 Chains and Nets QA →QAing on hgwbeta
- 21:4321:43, 31 May 2019 diff hist −3 Assembly QA Part 3 BETA Steps →Beta: Double check gbdb files
- 21:1721:17, 31 May 2019 diff hist +2 Assembly QA Part 3 BETA Steps →Beta: Push all tables to other assemblies to beta
- 21:0821:08, 31 May 2019 diff hist +12 Assembly QA Part 3 BETA Steps →Beta: Compare assembly.push list with dev mySQL table list
- 21:0721:07, 31 May 2019 diff hist −8 Assembly QA Part 3 BETA Steps →Beta: Compare assembly.push list with dev mySQL table list
22 May 2019
- 23:0523:05, 22 May 2019 diff hist +34 Assembly QA Part 3 BETA Steps →Beta: copyHgcentral test db defaultDb dev beta: Redundant if you did "all" above.
- 23:0423:04, 22 May 2019 diff hist +34 Assembly QA Part 3 BETA Steps →Beta: copyHgcentral test db dbDb dev beta: Redundant if you did "all" above.
- 23:0423:04, 22 May 2019 diff hist +34 Assembly QA Part 3 BETA Steps →Beta: copyHgcentral test db blatServers dev beta
- 23:0023:00, 22 May 2019 diff hist −25 Assembly QA Part 3 BETA Steps →Beta: Review copyHgcentral steps: Copy Paste easier
- 22:5022:50, 22 May 2019 diff hist −12 Assembly QA Part 3 BETA Steps →Beta: Remove certain tables from your assembly push list: Consistency
- 22:4522:45, 22 May 2019 diff hist −5 Assembly QA Part 3 BETA Steps →Beta: Remove trackDb and hgFindSpec tables from your HIVE table list: Paste-able commands
- 22:4322:43, 22 May 2019 diff hist −4 Assembly QA Part 3 BETA Steps →Beta: Copy redmine table list to hive
- 22:4222:42, 22 May 2019 diff hist −14 Assembly QA Part 3 BETA Steps →Beta: Copy redmine table list to hive: Making commands paste-able
21 May 2019
- 23:4423:44, 21 May 2019 diff hist −90 Assembly QA Part 2 Track Steps Keeping variables consistent as $db
- 23:3723:37, 21 May 2019 diff hist +6 Assembly QA Part 1 DEV Steps →Dev: vsXXX: corruption: Improving command's pasteability
- 23:3023:30, 21 May 2019 diff hist +91 Assembly QA Part 1 DEV Steps →Dev: vsXXX: corruption: Adding common commands
- 23:2923:29, 21 May 2019 diff hist +67 Assembly QA Part 1 DEV Steps →Dev: vsXXX: check README: Making commands pasteable
- 23:2323:23, 21 May 2019 diff hist −6 Assembly QA Part 1 DEV Steps →Dev: vsXXX: check md5sum: Working commands
- 23:1523:15, 21 May 2019 diff hist −6 Assembly QA Part 1 DEV Steps →Dev: liftOver: check md5sum: Pasteable
- 23:1523:15, 21 May 2019 diff hist +14 Assembly QA Part 1 DEV Steps →Dev: database: check README: Making command paste-able
- 23:1323:13, 21 May 2019 diff hist −7 Assembly QA Part 1 DEV Steps →Dev: bigZips: check for corruption: Paste-able
- 23:1023:10, 21 May 2019 diff hist +2 Assembly QA Part 1 DEV Steps →Dev: bigZips: check md5sum
- 23:0823:08, 21 May 2019 diff hist −7 Assembly QA Part 1 DEV Steps →Dev: bigZips: check md5sum: Copy paste-able
- 23:0323:03, 21 May 2019 diff hist −9 Assembly QA Part 1 DEV Steps →Dev: Run dbCheck: Making command copy paste-able
- 23:0223:02, 21 May 2019 diff hist −3 Assembly QA Part 1 DEV Steps →Dev: Review downloads dir: changing silly command format
- 22:5222:52, 21 May 2019 diff hist +85 Assembly QA Part 1 DEV Steps →Dev: Gateway: Organism image check: Noting where to change reference in html
20 May 2019
- 23:2023:20, 20 May 2019 diff hist +22 Assembly QA Part 1 DEV Steps →Dev: Check that BLAT Server is running: Adding missing pre tags
- 23:1923:19, 20 May 2019 diff hist −25 Assembly QA Part 1 DEV Steps Changing assembly name and dev> tag to make the command more copyable.
13 May 2019
- 16:2916:29, 13 May 2019 diff hist −7 New track checklist →Validate on the RR: Wrong table mention
10 May 2019
- 23:5323:53, 10 May 2019 diff hist −10 New track checklist →Push Request: Changed it from trackDb_public and hgFindSpec to TrackDb and Friends
- 23:0223:02, 10 May 2019 diff hist +63 New track checklist →Downloads: Adding note about auto-filling downloads directory.
- 21:5621:56, 10 May 2019 diff hist −7 m New track checklist →Performance and Display
8 May 2019
- 18:4818:48, 8 May 2019 diff hist +41 New track checklist →Makedoc: Path correcting, typo removal
2 May 2019
- 17:3717:37, 2 May 2019 diff hist +103 HgTablesTest details →Ex error1: Adding note to ignore chainSelf errors more.
8 April 2019
- 16:4016:40, 8 April 2019 diff hist −117 New track checklist →Push to hgwbeta: ReOrganizing info, deleting redundancy
3 April 2019
- 23:3423:34, 3 April 2019 diff hist +64 New track checklist →joinerCheck: Adding note about big files.
- 17:1317:13, 3 April 2019 diff hist −621 New track checklist Deleting outdated instructions.
19 January 2019
- 01:3901:39, 19 January 2019 diff hist +322 Conservation Track QA →Precaution when pushing to the RR: Adding documentation
15 January 2019
- 21:3621:36, 15 January 2019 diff hist +129 Conservation Track QA →Final Steps: Adding path and more clear instructions.
11 January 2019
- 23:0723:07, 11 January 2019 diff hist +49 Conservation Track QA →Check multizway#wayFrames table: Short note about where to find species list
9 January 2019
- 19:0919:09, 9 January 2019 diff hist 0 m Conservation Track QA →Check multizway#wayFrames table
- 19:0819:08, 9 January 2019 diff hist +30 Conservation Track QA →Check multizway#wayFrames table: Adding path where none prev specified.
- 00:4200:42, 9 January 2019 diff hist +84 Conservation Track QA →Examine and possibly push records for the extFile and seq tables: Making commands consistent and copyable, using $db instead of hg38
5 December 2018
- 17:2317:23, 5 December 2018 diff hist +138 New track checklist →Release Log and URL: Adding convention to leave Release Log URL empty when multiple assemblies.
26 November 2018
- 17:1417:14, 26 November 2018 diff hist +23 Assembly QA Part 4 RR Steps →RR: Post Google Groups announcement: Changing name
21 November 2018
- 19:3219:32, 21 November 2018 diff hist 0 Assembly QA Part 4 RR Steps Changing order to make 'edit static docs' before 'post release announcement'
- 18:4818:48, 21 November 2018 diff hist +147 Assembly QA Part 4 RR Steps →RR: Post Google Groups announcement: Adding FB and Twitter announcement info.
- 01:3601:36, 21 November 2018 diff hist +157 Assembly QA Part 4 RR Steps →RR: FAQreleases.html and add, commit, git push: Better documentation
- 01:3401:34, 21 November 2018 diff hist +148 Assembly QA Part 4 RR Steps →RR: Edit credits:html and add:commit:push: Static doc help
- 01:3301:33, 21 November 2018 diff hist +145 Assembly QA Part 4 RR Steps →RR: Edit indexNews:html and add:commit:push: Clarifying Static protocols
- 01:3101:31, 21 November 2018 diff hist +149 Assembly QA Part 4 RR Steps →RR: Edit newsarch:html and add:commit:git:push: Clarifying static doc protocols.
16 November 2018
- 18:3818:38, 16 November 2018 diff hist +7 Assembly QA Part 4 RR Steps →RR: Turn on GenBank updates add:commit:push: Making IGNORE STEP message larger
14 November 2018
- 22:0422:04, 14 November 2018 diff hist +87 Assembly QA Part 4 RR Steps →RR: make your new assembly the default: Reducing two line command to one line, adding check work code.
- 21:5921:59, 14 November 2018 diff hist +1 Assembly QA Part 4 RR Steps →RR: hgCentral:dbDb set active equal to 1: Format edits
- 21:5821:58, 14 November 2018 diff hist +236 Assembly QA Part 4 RR Steps →RR: hgCentral:dbDb set active equal to 1: Adding code to do it in command line and check changes.
13 November 2018
- 23:3523:35, 13 November 2018 diff hist +93 Assembly QA Part 3 BETA Steps →Beta: Check that your assembly is listed in hgwdev.dbs: Clarify replacement vs adding to the list.
10 November 2018
- 00:2300:23, 10 November 2018 diff hist +183 Assembly QA Part 4 RR Steps →RR: Add or update symlink htdocs:hgdownload currentGenomes: Adding warning to avoid unlink error
8 November 2018
- 23:3023:30, 8 November 2018 diff hist −13 Assembly QA Part 3 BETA Steps →Beta: Check that your assembly is listed in hgwdev.dbs: Changing this to the proper dbs file, as instructed by Braney
- 21:5921:59, 8 November 2018 diff hist +161 Assembly QA Part 3 BETA Steps →Beta: Push gbdb files: Including grep shortcut
7 November 2018
- 22:0722:07, 7 November 2018 diff hist +99 Assembly QA Part 3 BETA Steps →Beta: Review copyHgcentral steps: Highlighting shortcut.
- 21:5821:58, 7 November 2018 diff hist −70 Assembly QA Part 3 BETA Steps →Beta: Push all tables for your assembly to beta: Restoring original
- 21:5621:56, 7 November 2018 diff hist +70 Assembly QA Part 3 BETA Steps →Beta: Push all tables for your assembly to beta: Specifying which assembly
- 19:5819:58, 7 November 2018 diff hist −10 Assembly QA Part 3 BETA Steps →Beta: Remove certain tables from your assembly push list: Making more pastable
- 19:3219:32, 7 November 2018 diff hist −7 Assembly QA Part 3 BETA Steps →Beta: Make table PUSH lists for each assembly: Making it easier to copy and paste code
- 00:0600:06, 7 November 2018 diff hist +147 Assembly QA Part 3 BETA Steps →Beta: Copy redmine table list to hive: Commenting on redundancy.
6 November 2018
- 19:0819:08, 6 November 2018 diff hist +28 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks: Adding note to ignore label length Errors.
- 00:5300:53, 6 November 2018 diff hist −17 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks: Removed cut command to reflect Chris's changes, hopefully gets changed further.
3 November 2018
- 00:2800:28, 3 November 2018 diff hist +1 m Assembly QA Part 1 DEV Steps →Dev: Review blastTabs wiki
- 00:2700:27, 3 November 2018 diff hist +75 Assembly QA Part 1 DEV Steps →Dev: Review blastTabs wiki: Syncing info.
- 00:2200:22, 3 November 2018 diff hist +31 m Assembly QA Part 1 DEV Steps →Dev: Permissions check: downloads dir
- 00:1500:15, 3 November 2018 diff hist +341 Assembly QA Part 1 DEV Steps →Dev: Permissions check: downloads dir: Making this check easier by grepping out the junk
29 October 2018
- 17:3517:35, 29 October 2018 diff hist +101 Assembly QA Part 1 DEV Steps →Dev: bigZips: check README: Minor edit to clarify test options
26 October 2018
- 23:5823:58, 26 October 2018 diff hist +366 Assembly QA Part 1 DEV Steps →Dev: bigZips: check README: Automated readme output
- 23:4823:48, 26 October 2018 diff hist +726 Assembly QA Part 1 DEV Steps →Dev: Review notes and make temp dir for md5sum checks: Automated several md5sum check steps with one command.
24 October 2018
- 20:5420:54, 24 October 2018 diff hist +22 New track checklist →Validate on the RR: Clarified release log text expectations
23 October 2018
- 19:3019:30, 23 October 2018 diff hist +366 New track checklist →Push to hgwbeta
11 October 2018
- 21:5921:59, 11 October 2018 diff hist 0 m Post-Release-Checklist →Announce the release: Clarifying BG-announce style
- 21:5821:58, 11 October 2018 diff hist +107 Post-Release-Checklist →Announce the release: Clarifying BG-announce style
3 October 2018
- 21:3421:34, 3 October 2018 diff hist +4 Assembly QA Part 3 BETA Steps →Beta: Check that your assembly is listed in align.dbs: Making server location more clear
- 19:0419:04, 3 October 2018 diff hist −18 Assembly QA Part 4 RR Steps →RR: Check Tools: BLAT: protein: Replacing incorrect instructions
- 19:0319:03, 3 October 2018 diff hist −18 Assembly QA Part 4 RR Steps →RR: Check Tools: BLAT: dna: Replacing incorrect instructions.
- 19:0219:02, 3 October 2018 diff hist −40 Assembly QA Part 4 RR Steps →RR: Check Tools: LiftOver: Replacing incorrect instructions.
2 October 2018
- 18:4318:43, 2 October 2018 diff hist +1 Assembly QA Part 4 RR Steps →RR: check symlink on ftp site: Formatting
- 18:4318:43, 2 October 2018 diff hist +43 Assembly QA Part 4 RR Steps →RR: check symlink on ftp site: Adding path
- 17:2617:26, 2 October 2018 diff hist +54 Assembly QA Part 4 RR Steps →RR: Request push: rsync complete database: Adding missing announcement step
- 17:2517:25, 2 October 2018 diff hist +172 Assembly QA Part 4 RR Steps →RR: Request push: chain nets for other assemblies: Adding missing make public steps
- 16:3016:30, 2 October 2018 diff hist +229 Assembly QA Part 4 RR Steps →RR: Check for correct row in hgFixed.trackVersion for Ensembl tracks
1 October 2018
- 16:3916:39, 1 October 2018 diff hist +102 Assembly QA Part 3 BETA Steps →Beta: Do chain net quick qa or full qa: Making broken script comments more clear
28 September 2018
- 17:3317:33, 28 September 2018 diff hist +38 Assembly QA Part 3 BETA Steps →Beta: GenBank updates: check Genbank update times: Slight changes to make more clear.
27 September 2018
- 23:1623:16, 27 September 2018 diff hist +27 Assembly QA Part 3 BETA Steps →Beta: Check release tags: compare dev and beta tracks side by side: Clarifying file types
- 19:3019:30, 27 September 2018 diff hist +69 Assembly QA Part 3 BETA Steps →Beta: Check that your assembly is listed in align.dbs: Adding clarifying to proper location
- 19:2919:29, 27 September 2018 diff hist −321 Assembly QA Part 3 BETA Steps →Beta: Do a make public in trackDb for chain net organisms: Remove duplicate code
- 19:0019:00, 27 September 2018 diff hist 0 m Assembly QA Part 3 BETA Steps →Beta: Do a make beta in trackDb for chain net organisms
- 18:5918:59, 27 September 2018 diff hist +6 Assembly QA Part 3 BETA Steps →Beta: Do a make beta in trackDb for chain net organisms
- 18:5818:58, 27 September 2018 diff hist −70 Assembly QA Part 3 BETA Steps →Beta: Do a make beta in trackDb for chain net organisms: Took out a broken link, clarified command
26 September 2018
- 18:3518:35, 26 September 2018 diff hist −50 Chains and Nets QA →Prior to QAing on hgwbeta: Pushing from hgwdev: Cut 3 commands into one command
- 17:0917:09, 26 September 2018 diff hist +80 Chains and Nets QA →Prior to QAing on hgwbeta: Pushing from hgwdev: Clarifying need to repeat process
25 September 2018
- 23:4523:45, 25 September 2018 diff hist −18 Assembly QA Part 3 BETA Steps →Beta: copyHgcentral test db blatServers dev beta: Making commands more clear
- 23:2023:20, 25 September 2018 diff hist −10 Assembly QA Part 3 BETA Steps →Beta: Push all tables for your assembly to beta: Fix broken command
- 22:5222:52, 25 September 2018 diff hist +229 Assembly QA Part 3 BETA Steps →Beta: Compare assembly.push list with dev mySQL table list: Clarifying output
- 22:1922:19, 25 September 2018 diff hist −78 Assembly QA Part 3 BETA Steps →Beta: Remove certain tables from your assembly push list: fix broken command
- 19:0619:06, 25 September 2018 diff hist +142 Assembly QA Part 3 BETA Steps →Beta: Remove certain tables from your assembly push list: fix broken command
- 17:4717:47, 25 September 2018 diff hist −6 Assembly QA Part 3 BETA Steps →Beta: Copy redmine table list to hive: Changed directory to proper place
- 17:4117:41, 25 September 2018 diff hist −15 Chains and Nets QA →Prior to QAing on hgwbeta: Pushing from hgwdev: Changing make beta from beta to make beta from dev
24 September 2018
- 22:4122:41, 24 September 2018 diff hist −9 m Assembly QA Part 2 Track Steps →Tracks: Performance and Display: Took out broken link comment
- 19:4719:47, 24 September 2018 diff hist −4 Training new Browser Engineers Links changed from .soe or .cse to .gi current
- 19:4619:46, 24 September 2018 diff hist +11 Track Hub Example Updated hgwdev links to .gi, one link broken current
- 19:4519:45, 24 September 2018 diff hist +5 Static content for new assemblies Updated hgwdev links to .gi, one link broken
- 19:4419:44, 24 September 2018 diff hist −7 Static Page Protocol Links changed from .soe or .cse to .gi
- 19:4219:42, 24 September 2018 diff hist −1 Static Page Protocol Link changed from .soe or .cse to .gi
- 19:4219:42, 24 September 2018 diff hist −1 Selenium python GBiB script Link changed from .soe or .cse to .gi current
- 19:4219:42, 24 September 2018 diff hist −1 RR Down: Sending Alert Messages about Genome Browser Being Offline Link changed from .soe or .cse to .gi
- 19:4119:41, 24 September 2018 diff hist −1 Public Hub QA Updated links to .gi, all links validated
- 19:4019:40, 24 September 2018 diff hist −1 Monitoring Tasks Updated links to .gi, all links validated
- 19:4019:40, 24 September 2018 diff hist −1 Make your own virtual space Links changed from .soe or .cse to .gi current
- 19:3919:39, 24 September 2018 diff hist −1 Gbib development Links changed from .soe or .cse to .gi
- 19:3819:38, 24 September 2018 diff hist −1 ENCODE QA Updated hgwdev links to .gi, all links validated
- 19:3719:37, 24 September 2018 diff hist −1 Custom Track Examples Updated hgwdev links to .gi, all links validated current
- 19:3419:34, 24 September 2018 diff hist −1 CGI Testing Links changed from .soe or .cse to .gi, links valid
- 19:1419:14, 24 September 2018 diff hist −124 Assembly QA Part 2 Track Steps Reverting test changes back.
- 19:0619:06, 24 September 2018 diff hist +114 Assembly QA Part 2 Track Steps →Tracks: Note about big vcf track type: Testing a wiki crawler
21 September 2018
- 22:4722:47, 21 September 2018 diff hist −40 Assembly QA Part 1 DEV Steps →Dev: Run dbCheck: Removed 'broken' sign now that it works
- 22:3822:38, 21 September 2018 diff hist +25 Assembly QA Part 2 Track Steps →Tracks: Comparison to similar track: Added more detail.
20 September 2018
- 19:2319:23, 20 September 2018 diff hist +280 Assembly QA Part 2 Track Steps →Tracks: joinerCheck
19 September 2018
- 16:5816:58, 19 September 2018 diff hist −15 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks: Editing commands for accuracy
- 16:4016:40, 19 September 2018 diff hist −63 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks
- 00:5600:56, 19 September 2018 diff hist +72 Assembly QA Part 2 Track Steps →Tracks: qaGbTracks: Table name underscores: Added additional exceptions
- 00:3400:34, 19 September 2018 diff hist +93 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks
- 00:2000:20, 19 September 2018 diff hist +1,001 Assembly QA Part 2 Track Steps →Tracks: The BIG QA Script: qaGbTracks: Clarified the usage and added a few example commands.
18 September 2018
- 19:0219:02, 18 September 2018 diff hist +58 Assembly QA Part 1 DEV Steps →Dev: Gateway: Check the NCBI assembly version link: Grammar and shortcut testing
- 18:5818:58, 18 September 2018 diff hist +78 Assembly QA Part 1 DEV Steps →Dev: Gateway: Accession ID check: More clear steps
- 17:3617:36, 18 September 2018 diff hist +7 Assembly QA Part 1 DEV Steps →Dev: Run dbCheck: Formatting
- 17:3417:34, 18 September 2018 diff hist +33 Assembly QA Part 1 DEV Steps →Dev: Run dbCheck: Updated to mark command as broken
- 00:1900:19, 18 September 2018 diff hist +37 Assembly QA Part 1 DEV Steps →Dev: Gateway: Check default position
17 September 2018
- 23:3023:30, 17 September 2018 diff hist +7 Minimal browser Change intro to make more specific
- 17:0517:05, 17 September 2018 diff hist +6 Assembly QA Part 1 DEV Steps →Setup: Create a Google spreadsheet checklist from a template
7 September 2018
- 21:4421:44, 7 September 2018 diff hist +76 CGI Testing →hgPal
29 August 2018
- 19:0519:05, 29 August 2018 diff hist −4 Static Page JS Protocol Updated hgwdev links to .gi, all links validated current
- 19:0219:02, 29 August 2018 diff hist −4 Selenium python GBiB script Updated hgwdev links to .gi, all links validated
- 19:0119:01, 29 August 2018 diff hist +3 Selenium Updated hgwdev links to .gi, one link broken
- 18:5818:58, 29 August 2018 diff hist +6 RR Down: Sending Alert Messages about Genome Browser Being Offline Updated hgwdev links to .gi, one link broken
- 18:5618:56, 29 August 2018 diff hist −2 Preparing VirtualBox images Updated hgwdev links to .gi, all links validated current
- 18:5518:55, 29 August 2018 diff hist −5 Pre-QA Updated hgwdev links to .gi, all links validated current
- 18:5318:53, 29 August 2018 diff hist +1 Old ENCODE QA Updated hgwdev links to .gi, one link broken
- 18:5118:51, 29 August 2018 diff hist +6 New track checklist Updated hgwdev links to .gi, one link broken
- 18:4918:49, 29 August 2018 diff hist −1 Make your own virtual space Updated hgwdev links to .gi, all links validated
- 18:4718:47, 29 August 2018 diff hist −2 Google Calendar Updated hgwdev links to .gi, all links validated
- 18:4518:45, 29 August 2018 diff hist −5 Gbib development Updated hgwdev links to .gi, all links validated
- 18:2918:29, 29 August 2018 diff hist −1 GBiB Testing Updated hgwdev links to .gi, all links validated
- 18:1918:19, 29 August 2018 diff hist −7 ENCODE QA Updated hgwdev links to .gi, all links validated
- 18:1718:17, 29 August 2018 diff hist +2 ENCODE Data Wrangler HOWTO Updated hgwdev links to .gi, one link broken
- 18:1318:13, 29 August 2018 diff hist −5 Assembly QA Part 1 DEV Steps Updated hgwdev links to .gi, all links validated
- 18:0918:09, 29 August 2018 diff hist +6 Assembly QA Part 2 Track Steps Updated hgwdev links to .gi, one link broken
- 17:5217:52, 29 August 2018 diff hist −2 CGI Build Process Updated hgwdev.soe/hgwdev.cse links to .gi, 2 links untestable
- 17:4617:46, 29 August 2018 diff hist +7 Chains and Nets QA Updated hgwdev links to .gi, one link broken
- 17:4517:45, 29 August 2018 diff hist +24 CGI Testing hgwdev.soe or hgwdev.cse links updated, many BROKEN
- 17:2017:20, 29 August 2018 diff hist −2 Chains and Nets QA Links changed from hgwdev.cse or hgwdev.soe to hgwdev.gi, validated links
- 17:1717:17, 29 August 2018 diff hist −2 Custom Track Examples Links changed from hgwdev.cse or hgwdev.soe to hgwdev.gi, validated links
- 16:5616:56, 29 August 2018 diff hist +2 Ensembl QA Undo revision 4749 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +4 Emergency Backup BLAT Servers Undo revision 4748 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +2 ENCODE QA Checklist Undo revision 4747 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +10 ENCODE QA Undo revision 4746 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +15 ENCODE Data Wrangler HOWTO Undo revision 4745 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist −8 Details pages -- conventions Undo revision 4744 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +18 Demo sandbox Undo revision 4743 by Daniel (talk)
- 16:5616:56, 29 August 2018 diff hist +1 Demo Sandbox Undo revision 4742 by Daniel (talk) current
- 16:5516:55, 29 August 2018 diff hist +4 Custom Track Examples Undo revision 4741 by Daniel (talk)
- 16:5516:55, 29 August 2018 diff hist +4 Creating a pushQ Entry Undo revision 4740 by Daniel (talk) current
- 16:5516:55, 29 August 2018 diff hist +5 Conservation Track QA Undo revision 4739 by Daniel (talk)
- 16:5516:55, 29 August 2018 diff hist +1 Commit access Undo revision 4738 by Daniel (talk) current
- 16:5516:55, 29 August 2018 diff hist +3 Code summary Undo revision 4737 by Daniel (talk) current
- 16:5516:55, 29 August 2018 diff hist +2 Cherry-picking a change in git Undo revision 4736 by Daniel (talk)
- 16:5516:55, 29 August 2018 diff hist +26 Checking RR status through hgTracksRandom Undo revision 4735 by Daniel (talk)
- 16:5516:55, 29 August 2018 diff hist +1 Changes to cv.ra Undo revision 4734 by Daniel (talk) current
- 16:5516:55, 29 August 2018 diff hist +3 Chains and Nets QA Undo revision 4733 by Daniel (talk)
- 16:5416:54, 29 August 2018 diff hist +2 CGI testing responsibilities Undo revision 4732 by Daniel (talk)
- 16:5416:54, 29 August 2018 diff hist +38 CGI Testing Undo revision 4731 by Daniel (talk)
- 16:5416:54, 29 August 2018 diff hist +10 CGI Build Process Undo revision 4730 by Daniel (talk)
- 16:5416:54, 29 August 2018 diff hist +1 BlastTabs Undo revision 4729 by Daniel (talk)
- 16:5416:54, 29 August 2018 diff hist +1 Big Bed/Wig QA Undo revision 4728 by Daniel (talk)
- 16:5316:53, 29 August 2018 diff hist +16 Assembly QA Part 4 RR Steps Undo revision 4727 by Daniel (talk)
- 16:5316:53, 29 August 2018 diff hist +6 Assembly QA Part 2 Track Steps Undo revision 4726 by Daniel (talk)
- 16:5316:53, 29 August 2018 diff hist +2 Assembly QA Part 3 BETA Steps Undo revision 4725 by Daniel (talk)
- 16:5216:52, 29 August 2018 diff hist +6 Assembly QA Part 1 DEV Steps Undo revision 4724 by Daniel (talk)
- 16:5216:52, 29 August 2018 diff hist +2 Archived assemblies Undo revision 4723 by Daniel (talk) current
- 16:4416:44, 29 August 2018 diff hist −1 Apache error log output Undo revision 4753 by Daniel (talk)
- 16:4316:43, 29 August 2018 diff hist +4 Euronode Undo revision 4750 by Daniel (talk) current
- 16:3816:38, 29 August 2018 diff hist +51 Frequently asked mailing list questions Undo revision 4751 by Daniel (talk)
- 16:3716:37, 29 August 2018 diff hist +1 Apache error log output Undo revision 4722 by Daniel (talk)
- 00:4800:48, 29 August 2018 diff hist −51 Frequently asked mailing list questions Links changed from .soe or .cse to .gi
- 00:4500:45, 29 August 2018 diff hist −4 Euronode Links changed from .soe or .cse to .gi
- 00:4500:45, 29 August 2018 diff hist −2 Ensembl QA Links changed from .soe or .cse to .gi
- 00:4400:44, 29 August 2018 diff hist −4 Emergency Backup BLAT Servers Links changed from .soe or .cse to .gi
- 00:4300:43, 29 August 2018 diff hist −2 ENCODE QA Checklist Links changed from .soe or .cse to .gi
- 00:4300:43, 29 August 2018 diff hist −10 ENCODE QA Links changed from .soe or .cse to .gi
- 00:4200:42, 29 August 2018 diff hist −15 ENCODE Data Wrangler HOWTO Links changed from .soe or .cse to .gi
- 00:4000:40, 29 August 2018 diff hist +8 Details pages -- conventions Links changed from .soe or .cse to .gi
- 00:3900:39, 29 August 2018 diff hist −18 Demo sandbox Links changed from .soe or .cse to .gi
- 00:3800:38, 29 August 2018 diff hist −1 Demo Sandbox Links changed from .soe or .cse to .gi
- 00:3700:37, 29 August 2018 diff hist −4 Custom Track Examples Links changed from .soe or .cse to .gi
- 00:3600:36, 29 August 2018 diff hist −4 Creating a pushQ Entry Links changed from .soe or .cse to .gi
- 00:3600:36, 29 August 2018 diff hist −5 Conservation Track QA Links changed from .soe or .cse to .gi
- 00:3500:35, 29 August 2018 diff hist −1 Commit access Links changed from .soe or .cse to .gi
- 00:3500:35, 29 August 2018 diff hist −3 Code summary Links changed from .soe or .cse to .gi
- 00:3400:34, 29 August 2018 diff hist −2 Cherry-picking a change in git Links changed from .soe or .cse to .gi
- 00:3400:34, 29 August 2018 diff hist −26 Checking RR status through hgTracksRandom Link changed from .soe or .cse to .gi
- 00:3300:33, 29 August 2018 diff hist −1 Changes to cv.ra Link changed from .soe or .cse to .gi
- 00:3200:32, 29 August 2018 diff hist −3 Chains and Nets QA Link changed from .soe or .cse to .gi
- 00:3100:31, 29 August 2018 diff hist −2 CGI testing responsibilities Link changed from .soe or .cse to .gi
- 00:3100:31, 29 August 2018 diff hist −38 CGI Testing Link changed from .soe or .cse to .gi
- 00:2800:28, 29 August 2018 diff hist −10 CGI Build Process Link changed from .soe or .cse to .gi
- 00:2700:27, 29 August 2018 diff hist −1 BlastTabs Link changed from .soe or .cse to .gi
- 00:2600:26, 29 August 2018 diff hist −1 Big Bed/Wig QA Link changed from .soe or .cse to .gi
- 00:2500:25, 29 August 2018 diff hist −16 Assembly QA Part 4 RR Steps Link changed from .soe or .cse to .gi
- 00:2300:23, 29 August 2018 diff hist −6 Assembly QA Part 2 Track Steps Link changed from .soe or .cse to .gi
- 00:2200:22, 29 August 2018 diff hist −2 Assembly QA Part 3 BETA Steps Link changed from .soe or .cse to .gi
- 00:2100:21, 29 August 2018 diff hist −6 Assembly QA Part 1 DEV Steps Link changed from .soe or .cse to .gi
- 00:2000:20, 29 August 2018 diff hist −2 Archived assemblies Link changed from .soe or .cse to .gi
- 00:1800:18, 29 August 2018 diff hist −1 Apache error log output Changing links from .cse or .soe to .gi
27 August 2018
- 21:1121:11, 27 August 2018 diff hist +15 CGI testing responsibilities Alphabetizing Names and giving Daniel hgVai testing responsibilities
