ClusterID Chr Start End Direction Peak Score Focus Ratio Annotation Detailed Annotation Distance to TSS Nearest PromoterID PromoterID Nearest Unigene Nearest Refseq Nearest Ensembl Gene Name Gene Alias Gene Description CpG% GC% GRE_adaptedIR3 Best Motif log-odds Score chr7-91 chr7 89904992 89905001 + 16.1 NA intron (NR_015614, intron 1 of 2) intron (NR_015614, intron 1 of 2) 646 NR_015614 319711 Mm.31753 XM_001473432 E230029C05Rik AI452102|B230337J15 RIKEN cDNA E230029C05 gene 0 0.5 -10000000000 chr9-169 chr9 70668535 70668538 + 11.8 NA intron (NM_008280, intron 1 of 8) intron (NM_008280, intron 1 of 8) 65489 NM_008280 15450 Mm.390187 NM_008280 ENSMUSG00000032207 Lipc AI256194|HL|Hpl lipase, hepatic 0 0.5 -10000000000 chr6-135 chr6 97350659 97350662 + 11.8 NA intron (NM_145148, intron 6 of 23) intron (NM_145148, intron 6 of 23) -132417 NM_001081157 320502 Mm.68163 NM_001081157 ENSMUSG00000044086 Lmod3 5430424A14Rik|MGC156399 leiomodin 3 (fetal) 0 0.25 -10000000000 chr11-304 chr11 115694260 115694261 + 10.7 NA Intergenic Intergenic -21968 NM_183259 66528 Mm.275740 NM_183259 2210020M01Rik - RIKEN cDNA 2210020M01 gene 0 0.5 -10000000000 chr14-65 chr14 24014918 24014929 + 9.6 NA Intergenic Intergenic -277552 NM_183208 328365 Mm.227484 XM_001472051 ENSMUSG00000007817 Zmiz1 BC065120|E330020C23|I920194n01|Rai17|Zimp10 zinc finger, MIZ-type containing 1 0 0.5 -10000000000 chr1-307 chr1 90786076 90786085 + 9.6 NA Intergenic Intergenic -115552 NM_133816 98402 Mm.170983 NM_133816 ENSMUSG00000036206 Sh3bp4 AI594717|AW227605|BOG25 SH3-domain binding protein 4 0 0.4 -10000000000 chr1-308 chr1 91870286 91870295 + 9.6 NA Intergenic Intergenic -24542 NM_139152 208372 Mm.215164 NM_139152 ENSMUSG00000067081 Asb18 Asb-18 ankyrin repeat and SOCS box-containing 18 0 0.5 -10000000000 chr2-183 chr2 115231340 115231354 + 12.9 NA Intergenic Intergenic -27705 NR_030712 100043232 Mm.240112 XM_001479789 3110099E03Rik - RIKEN cDNA 3110099E03 gene 0 0.4 -22.833796 chr12-171 chr12 25324219 25324239 + 9.6 NA Intergenic Intergenic 26897 NM_009104 20135 Mm.99 NM_009104 ENSMUSG00000020649 Rrm2 AA407299|MGC113712|R2 ribonucleotide reductase M2 0 0.714286 -20.297298 chr11-364 chr11 87166490 87166540 + 9.6 NA intron (NM_177167, intron 1 of 6) intron (NM_177167, intron 1 of 6) 8674 NM_177167 320472 Mm.341988 NM_177167 ENSMUSG00000046442 Ppm1e AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072 protein phosphatase 1E (PP2C domain containing) 0.06 0.627451 -16.726852 chr2-96 chr2 147684601 147684626 + 19.3 NA Intergenic Intergenic 53797 NM_010446 15376 Mm.938 NM_010446 ENSMUSG00000037025 Foxa2 HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b forkhead box A2 0.12 0.653846 -13.358783 chr13-171 chr13 112518794 112518828 + 9.6 NA Intergenic Intergenic 92108 NM_028487 73274 Mm.441830 NM_001122963 ENSMUSG00000032745 Gpbp1 1700034P14Rik|AU019836|D230035M11Rik|Gpbp|mGPBP GC-rich promoter binding protein 1 0 0.428571 -13.075093 chr11-180 chr11 99452570 99452608 + 16.1 NA Intergenic Intergenic -1415 NM_026807 68673 Mm.351893 NM_026807 ENSMUSG00000044649 Krtap4-2 1110033F04Rik|AI604442 keratin associated protein 4-2 0.026316 0.358974 -11.582726 chr8-126 chr8 63849011 63849057 + 12.9 NA intron (NM_007711, intron 1 of 11) intron (NM_007711, intron 1 of 11) -2093 NM_173876 12725 Mm.259751 NM_007711 ENSMUSG00000004319 Clcn3 Clc3 chloride channel 3 0 0.340426 -10.415458 chr6-67 chr6 68179797 68179914 + 18.2 NA Intergenic RLTR3_Mm-int|LTR|ERVK -684578 NR_003100 75070 Mm.463364 NR_003100 4930515G16Rik - myc induced nuclear antigen pseudogene 0.034188 0.423729 -9.972744 chr12-42 chr12 39539675 39539756 + 25.7 NA Intergenic Intergenic 245582 NM_001163154 14009 Mm.4866 NM_001163154 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant gene 1 0 0.439024 -9.673853 chr12-31 chr12 105918492 105918519 + 34.3 NA Intergenic Intergenic -45716 NM_009747 12062 Mm.390475 NM_009747 ENSMUSG00000021070 Bdkrb2 B(2)|B2|B2R|BK-2|BK2|BK2R|BKR2|BRB2 bradykinin receptor, beta 2 0.037037 0.642857 -9.378789 chr2-207 chr2 75066423 75066512 + 11.8 NA Intergenic Intergenic -393630 NM_146130 229279 Mm.379375 NM_053263 ENSMUSG00000059005 Hnrnpa3 2410013L13Rik|2610209F03Rik|2610510D13Rik|Hnrpa3|MGC101940|MGC37309 heterogeneous nuclear ribonucleoprotein A3 0.011236 0.522222 -9.373306 chr11-5 chr11 7022465 7022499 + 91.1 NA intron (NM_009622, intron 4 of 19) intron (NM_009622, intron 4 of 19) 58991 NM_009622 432530 Mm.259733 NM_009622 ENSMUSG00000020431 Adcy1 AC1|D11Bwg1392e|I-AC|KIAA4070|brl|mKIAA4070 adenylate cyclase 1 0.029412 0.457143 -9.341737 chr15-18 chr15 76306199 76306297 + 36.4 NA intron (NM_008296, intron 1 of 11) intron (NM_008296, intron 1 of 11) 1549 NM_008296 15499 Mm.347444 NM_008296 ENSMUSG00000022556 Hsf1 AA960185 heat shock factor 1 0 0.555556 -9.297257 chr11-93 chr11 53983935 53983974 + 31.1 NA Intergenic Intergenic 39608 NM_001136076 18452 Mm.3705 NM_001136076 ENSMUSG00000018906 P4ha2 AA407196|C76437|P4hl procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide 0 0.475 -8.913411 chr5-242 chr5 34744185 34744267 + 9.6 NA intron (NM_001030306, intron 2 of 17) intron (NM_001030306, intron 2 of 17) 6519 NM_001030306 231128 Mm.286885 NM_001030306 ENSMUSG00000037210 Fam193a MGC106708 family with sequence similarity 193, member A 0.012195 0.433735 -8.84855 chr1-280 chr1 66161464 66161649 + 9.6 NA intron (NM_001039934, intron 2 of 14) intron (NM_001039934, intron 2 of 14) 53020 NM_001039934 17756 Mm.256966 NM_001039934 ENSMUSG00000015222 Mtap2 MAP-2|MAP2|Mtap-2 microtubule-associated protein 2 0.016216 0.478495 -8.583825 chr13-113 chr13 4777804 4777989 + 10.7 NA Intergenic Intergenic -169486 NM_018859 56043 Mm.251908 NM_018859 ENSMUSG00000045410 Akr1e1 1810061I10Rik|Akr1e2 aldo-keto reductase family 1, member E1 0.005405 0.44086 -8.560485 chrX-61 chrX 125391009 125391194 + 12.9 NA intron (NM_172493, intron 17 of 26) intron (NM_172493, intron 17 of 26) 295013 NM_017398 54004 Mm.10763 NM_017398 ENSMUSG00000034480 Diap2 Dia3|Diaph2|Drf2|E430022I22Rik diaphanous homolog 2 (Drosophila) 0 0.456989 -8.554708 chr2-308 chr2 102749995 102750111 + 9.6 NA Intergenic Intergenic -47549 NM_001039150 12505 Mm.423621 NM_001039150 ENSMUSG00000005087 Cd44 AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1 CD44 antigen 0.025862 0.521368 -8.510481 chr16-23 chr16 69862680 69862799 + 39.6 NA Intergenic Intergenic -116353 NM_173069 224318 Mm.212743 NM_173069 ENSMUSG00000063163 Speer2 SPEER-2 spermatogenesis associated glutamate (E)-rich protein 2 0 0.425 -8.481564 chr7-60 chr7 128589145 128589330 + 20.4 NA Intergenic Intergenic 53220 NM_001029982 207352 Mm.297105 NM_001029982 ENSMUSG00000055319 Sec23ip D7Ertd373e Sec23 interacting protein 0.010811 0.478495 -8.421324 chr2-3 chr2 98467622 98467807 + 184.3 NA Intergenic GSAT_MM|Satellite|Satellite 1199202 NM_178725 241568 Mm.241682 NM_178725 ENSMUSG00000050587 Lrrc4c 6430556C10Rik|NGL-1|mKIAA1580 leucine rich repeat containing 4C 0.037838 0.360215 -8.325999 chr2-160 chr2 143705742 143705835 + 13.9 NA Intergenic Intergenic -3084 NM_024281 81910 Mm.13705 NM_024281 ENSMUSG00000027422 Rrbp1 1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180 ribosome binding protein 1 0.021505 0.446809 -8.15883 chr10-302 chr10 43503773 43503886 + 9.6 NA Intergenic Intergenic 86322 NM_001081054 76563 Mm.5904 NM_001081054 ENSMUSG00000019863 Qrsl1 2700038P16Rik|C80053|GatA glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 0.00885 0.45614 -8.102739 chr5-82 chr5 140459370 140459434 + 19.3 NA intron (NM_010752, intron 10 of 17) intron (NM_010752, intron 10 of 17) 114624 NM_010752 17120 Mm.27250 NM_010752 ENSMUSG00000029554 Mad1l1 AI173502|AW550425|Mad1 mitotic arrest deficient 1-like 1 0.015625 0.507692 -8.050233 chr13-164 chr13 110602454 110602639 + 9.6 NA intron (NM_011056, intron 3 of 16) intron (NM_011056, intron 3 of 16) 156939 NR_030644 100124489 NR_030644 Mir582 Mirn582|mmu-mir-582 microRNA 582 0.010811 0.505376 -7.825015 chr9-239 chr9 66424123 66424246 + 9.6 NA Intergenic Intergenic -33198 NM_144937 235441 Mm.38976 NM_144937 ENSMUSG00000032376 Usp3 AA409661|BC017156|MGC28886 ubiquitin specific peptidase 3 0.00813 0.427419 -7.631866 chr11-104 chr11 8493363 8493548 + 27.9 NA intron (NM_001083587, intron 3 of 30) intron (NM_001083587, intron 3 of 30) 71083 NM_001083587 319939 Mm.337820 NM_001083587 ENSMUSG00000020422 Tns3 BC023928|F830010I22Rik|TEM6|Tens1 tensin 3 0.010811 0.430108 -7.565351 chr9-1 chr9 35054904 35055089 + 227.1 NA Intergenic GSAT_MM|Satellite|Satellite 37445 NM_028040 71989 Mm.273515 NM_028040 ENSMUSG00000032044 Rpusd4 2410001E19Rik RNA pseudouridylate synthase domain containing 4 0.021622 0.354839 -7.539511 chr9-5 chr9 3025416 3025601 + 124.3 NA Intergenic GSAT_MM|Satellite|Satellite 174305 NR_027988 114673 Mm.422774 NR_027988 4930433N12Rik - RIKEN cDNA 4930433N12 gene 0.021622 0.365591 -7.539511 chr12-112 chr12 74235314 74235487 + 12.9 NA intron (NM_001037717, intron 4 of 15) intron (NM_001037717, intron 4 of 15) 29708 NM_001037717 625098 Mm.290605 XM_916892 ENSMUSG00000044712 Slc38a6 AW322671|EG625098 solute carrier family 38, member 6 0.011561 0.511494 -7.476677 chr9-188 chr9 47579764 47579868 + 10.7 NA intron (NM_018770, intron 8 of 9) intron (NM_018770, intron 8 of 9) 298470 NM_018770 54725 Mm.234832 NM_001025600 ENSMUSG00000032076 Cadm1 2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1 cell adhesion molecule 1 0.019231 0.514286 -7.311822 chr6-179 chr6 121208825 121208941 + 10.7 NA Intergenic L1MC4a|LINE|L1 -2641 NM_011909 24110 Mm.326911 NM_011909 ENSMUSG00000030107 Usp18 1110058H21Rik|AW047653|UBP43|Ubp15 ubiquitin specific peptidase 18 0.008621 0.495726 -7.305145 chr16-254 chr16 10904287 10904442 + 9.6 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 2335 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor 0 0.448718 -7.304053 chr3-155 chr3 58383915 58384096 + 10.7 NA Intergenic Intergenic -119612 NM_001081229 72033 Mm.218409 NM_001081229 ENSMUSG00000027806 Tsc22d2 1810043J12Rik|5530402M19Rik TSC22 domain family, member 2 0.005525 0.434066 -7.238628 chr18-140 chr18 13006168 13006292 + 9.6 NA intron (NM_207530, intron 15 of 27) intron (NM_207530, intron 15 of 27) 78659 NM_207530 64291 Mm.443224 NM_207530 ENSMUSG00000044252 Osbpl1a G430090F17Rik|Gm753|Osbpl1b oxysterol binding protein-like 1A 0.008065 0.408 -7.169825 chr18-148 chr18 28569904 28570089 + 9.6 NA Intergenic Intergenic -1845909 NM_181414 225326 Mm.194127 NM_181414 ENSMUSG00000033628 Pik3c3 5330434F23Rik|Vps34 phosphoinositide-3-kinase, class 3 0.005405 0.478495 -7.121135 chr16-59 chr16 55725862 55726047 + 23.6 NA Intergenic Intergenic 21135 NM_001159394 80859 Mm.247272 NM_001159394 ENSMUSG00000035356 Nfkbiz AA408868|INAP|Mail nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.005405 0.403226 -7.096766 chr8-87 chr8 76515173 76515358 + 16.1 NA Intergenic L1VL2|LINE|L1 -266637 NM_010687 16795 Mm.324371 NM_010687 ENSMUSG00000004383 Large BPFD#36|Gyltl1a|Mbp-1|Mbp1|enr|fg|froggy|mKIAA0609|myd like-glycosyltransferase 0 0.467742 -7.024827 chr13-145 chr13 75510997 75511182 + 9.6 NA Intergenic Intergenic -44899 NM_013628 18548 Mm.1333 NM_013628 ENSMUSG00000021587 Pcsk1 MGC124320|MGC124321|Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3 proprotein convertase subtilisin/kexin type 1 0.010811 0.38172 -6.990921 chr18-49 chr18 11968903 11969088 + 17.1 NA Intergenic Intergenic -13814 NM_022021 63955 Mm.40717 NM_001146287 ENSMUSG00000040957 Cables1 Cables|ik3-1 CDK5 and Abl enzyme substrate 1 0 0.526882 -6.909999 chr5-167 chr5 33043122 33043307 + 11.8 NA Intergenic Intergenic 59269 NM_177298 320951 Mm.273765 NM_177298 ENSMUSG00000023452 Pisd 9030221M09Rik phosphatidylserine decarboxylase 0.005405 0.451613 -6.813296 chr8-233 chr8 71757081 71757215 + 9.6 NA TTS (NM_027590) TTS (NM_027590) 34206 NM_027590 70885 Mm.252421 NM_027590 ENSMUSG00000031864 Ints10 4921521J11Rik|AI462004 integrator complex subunit 10 0 0.518519 -6.778183 chr9-195 chr9 61606831 61606924 + 10.7 NA Intergenic Intergenic 105639 NM_018853 56040 Mm.3158 NM_018853 ENSMUSG00000007892 Rplp1 2410042H16Rik|Arpp1|C430017H15Rik|MGC103133 ribosomal protein, large, P1 0 0.659574 -6.6974 chr6-70 chr6 3151419 3151604 + 17.1 NA Intergenic SSU-rRNA_Hsa|rRNA|rRNA 198060 NM_010156 209086 Mm.196013 XM_620286 ENSMUSG00000047735 Samd9l AA175286|ESTM25|mKIAA2005 sterile alpha motif domain containing 9-like 0.091892 0.510753 -6.672337 chr3-141 chr3 3000723 3000908 + 10.7 NA Intergenic Intergenic -492865 NM_013920 30942 Mm.330897 NM_013920 ENSMUSG00000017688 Hnf4g NR2A2 hepatocyte nuclear factor 4, gamma 0 0.478495 -6.601103 chr5-202 chr5 43461069 43461163 + 10.7 NA intron (NR_028417, intron 5 of 7) intron (NR_028417, intron 5 of 7) -60594 NM_175937 231207 Mm.7233 NM_001177379 ENSMUSG00000039782 Cpeb2 A630055H10Rik cytoplasmic polyadenylation element binding protein 2 0.031915 0.431579 -6.57126 chr18-89 chr18 65084510 65084691 + 12.9 NA intron (NM_001114386, intron 1 of 30) intron (NM_001114386, intron 1 of 30) -64295 NM_031881 83814 Mm.98668 NM_001114386 ENSMUSG00000024589 Nedd4l 1300012C07Rik|Nedd4-2|Nedd4b neural precursor cell expressed, developmentally down-regulated gene 4-like 0.016575 0.516484 -6.558473 chrM-5 chrM 11102 11287 + 76.1 NA NA Intergenic NA NA 0.027027 0.446237 -6.543995 chr12-213 chr12 110000750 110000833 + 9.6 NA intron (NR_003633, intron 3 of 4) intron (NR_003633, intron 3 of 4) 7587 NR_003633 17263 Mm.442513 NR_003633 Meg3 2900016C05Rik|3110050O07Rik|6330408G06Rik|AI425946|AW108224|D12Bwg1266e|Gtl2|R74756|R75394 maternally expressed 3 0.048193 0.619048 -6.530631 chrX-10 chrX 165333443 165333628 + 36.4 NA 3' UTR (NM_183151, exon 10 of 10) 3' UTR (NM_183151, exon 10 of 10) -10513 NR_029457 654820 Mm.467605 NM_001039559 G530011O06Rik - RIKEN cDNA G530011O06 gene 0.010811 0.5 -6.520658 chr17-115 chr17 47482946 47483131 + 9.6 NA Intergenic Intergenic -69785 NM_026625 68224 Mm.138490 NM_026625 ENSMUSG00000021545 1700067P10Rik - RIKEN cDNA 1700067P10 gene 0.005405 0.494624 -6.485226 chr5-227 chr5 142273126 142273248 + 10.7 NA intron (NM_177879, intron 17 of 44) intron (NM_177879, intron 17 of 44) -380783 NM_199068 17425 Mm.24214 NM_199068 ENSMUSG00000056493 Foxk1 A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf forkhead box K1 0 0.544715 -6.452371 chr8-258 chr8 127381951 127382014 + 9.6 NA Intergenic Intergenic -24874 NM_029746 76332 Mm.240108 NM_029746 ENSMUSG00000031979 Cog2 1190002B08Rik|2700012E02Rik|C86089|Ldlc component of oligomeric golgi complex 2 0.031746 0.625 -6.420884 chr3-77 chr3 33491780 33491949 + 16.1 NA Intergenic Intergenic -157233 NM_001163516 58869 Mm.151332 NM_001163516 ENSMUSG00000027674 Pex5l 1700016J08Rik|PXR2|Pex2|TRIP8b peroxisomal biogenesis factor 5-like 0.017751 0.5 -6.412485 chr19-89 chr19 17026741 17026846 + 10.7 NA intron (NM_181348, intron 1 of 19) intron (NM_181348, intron 1 of 19) 3657 NM_181348 353211 Mm.480716 NM_181348 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|KIAA0367|mKIAA0367 prune homolog 2 (Drosophila) 0.019048 0.481132 -6.408605 chr11-258 chr11 98953585 98953739 + 11.8 NA Intergenic MIR3|SINE|MIR 17505 NM_007719 12775 Mm.2932 NM_007719 ENSMUSG00000037944 Ccr7 CD197|Cdw197|Cmkbr7|EBI1|Ebi1h chemokine (C-C motif) receptor 7 0 0.464516 -6.404126 chr1-219 chr1 51985008 51985170 + 10.7 NA intron (NM_011487, intron 3 of 23) intron (NM_011487, intron 3 of 23) 32301 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 0.012346 0.435583 -6.358335 chr8-115 chr8 125584675 125584860 + 13.9 NA intron (NM_009824, intron 1 of 11) intron (NM_009824, intron 1 of 11) 432 NM_009824 12398 Mm.194339 NM_001109873 ENSMUSG00000006362 Cbfa2t3 A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) 0.016216 0.543011 -6.355753 chr6-180 chr6 7739125 7739216 + 9.6 NA Intergenic Intergenic -56053 NM_052993 94192 Mm.102752 NM_052993 ENSMUSG00000042460 C1galt1 2210410E06Rik|AV284120|T-synthase core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 0.010989 0.369565 -6.355753 chrX-76 chrX 165345122 165345307 + 11.8 NA Intergenic Intergenic -22192 NR_029457 654820 Mm.467605 NM_001039559 G530011O06Rik - RIKEN cDNA G530011O06 gene 0.005405 0.451613 -6.354363 chr7-71 chr7 45545750 45545897 + 18.2 NA TTS (NM_019934) TTS (NM_019934) 1777 NM_019934 56546 Mm.56914 NM_019934 Sec1 Fut10|Fut3 secretory blood group 1 0.006803 0.493243 -6.351727 chr12-66 chr12 48710032 48710217 + 18.2 NA Intergenic GSAT_MM|Satellite|Satellite -1015392 NM_021361 664883 Mm.462575 XM_001472258 ENSMUSG00000021047 Nova1 9430099M15Rik|G630039L02|Nova-1 neuro-oncological ventral antigen 1 0.016216 0.392473 -6.330933 chr6-186 chr6 30313821 30314006 + 9.6 NA Intergenic Intergenic 27107 NM_172735 232679 Mm.29780 NM_172735 ENSMUSG00000039130 Zc3hc1 1110054L24Rik|AU018540|AU019789|HSPC216|Nipa zinc finger, C3HC type 1 0.010811 0.494624 -6.298469 chr9-114 chr9 110126374 110126559 + 16.1 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -23892 NM_001081381 72341 Mm.374250 XM_135177 ENSMUSG00000054836 2610002I17Rik 2610001P13Rik|AV159994|Tmem103 RIKEN cDNA 2610002I17 0.032432 0.505376 -6.29422 chr12-4 chr12 75723143 75723328 + 87.8 NA Intergenic GSAT_MM|Satellite|Satellite 372937 NM_172805 238271 Mm.44465 NM_172805 ENSMUSG00000034402 Kcnh5 Eag2 potassium voltage-gated channel, subfamily H (eag-related), member 5 0.021622 0.403226 -6.264926 chr7-73 chr7 89454799 89454984 + 18.2 NA Intergenic Intergenic -53118 NM_181407 109264 Mm.334011 NM_181407 ENSMUSG00000030621 Me3 1700020C08Rik|B230207H15Rik|MGC107389 malic enzyme 3, NADP(+)-dependent, mitochondrial 0.010811 0.376344 -6.170342 chr13-8 chr13 77902461 77902646 + 53.6 NA intron (NM_001145676, intron 19 of 19) intron (NM_001145676, intron 19 of 19) -269683 NM_001163420 68675 Mm.343005 XM_193728 ENSMUSG00000064138 Fam172a 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87 family with sequence similarity 172, member A 0.021622 0.33871 -6.153494 chrM-4 chrM 12154 12339 + 78.2 NA NA Intergenic NA NA 0.032432 0.403226 -6.111011 chr18-34 chr18 82355621 82355806 + 21.4 NA Intergenic Intergenic 185492 NM_008082 14427 Mm.6219 NM_008082 ENSMUSG00000024553 Galr1 Galnr1 galanin receptor 1 0.010811 0.55914 -6.075912 chr2-112 chr2 33404757 33404942 + 17.1 NA intron (NM_010725, intron 2 of 7) intron (NM_010725, intron 2 of 7) 57671 NM_010725 16917 Mm.39825 NM_010725 ENSMUSG00000038765 Lmx1b LMX1.1|LMX1.2|MGC159172 LIM homeobox transcription factor 1 beta 0.005405 0.586021 -5.952817 chr11-301 chr11 109450933 109451118 + 10.7 NA Intergenic Intergenic -16013 NM_021880 19084 Mm.30039 NM_021880 ENSMUSG00000020612 Prkar1a 1300018C22Rik|RIalpha|Tse-1|Tse1 protein kinase, cAMP dependent regulatory, type I, alpha 0.027027 0.38172 -5.947983 chr9-3 chr9 3000012 3000197 + 150 NA Intergenic GSAT_MM|Satellite|Satellite 199709 NR_027988 114673 Mm.422774 NR_027988 4930433N12Rik - RIKEN cDNA 4930433N12 gene 0.010811 0.349462 -5.941568 chr13-44 chr13 6403854 6404039 + 18.2 NA Intergenic GSAT_MM|Satellite|Satellite -143456 NM_145131 69617 Mm.41933 NM_145131 ENSMUSG00000021193 Pitrm1 2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104 pitrilysin metallepetidase 1 0.016216 0.376344 -5.907847 chr18-14 chr18 56064853 56065038 + 35.4 NA Intergenic GSAT_MM|Satellite|Satellite -492555 NM_026240 107022 Mm.24356 NM_026240 ENSMUSG00000001700 Gramd3 9030613F08Rik|9130427A09Rik|AW061306|NS3TP2 GRAM domain containing 3 0.016216 0.376344 -5.903358 chr5-72 chr5 72720418 72720571 + 20.4 NA intron (NM_001122756, intron 3 of 21) intron (NM_001122756, intron 3 of 21) 62849 NM_016869 53419 Mm.332425 NM_001122756 ENSMUSG00000005220 Corin AV273130|Lrp4|MGC118735 corin 0.03268 0.5 -5.891662 chr2-230 chr2 179698524 179698709 + 11.8 NA intron (NM_009867, intron 2 of 15) intron (NM_009867, intron 2 of 15) 207438 NM_001081092 228980 Mm.235542 NM_001081092 ENSMUSG00000039117 Taf4a 135kDa|AI450312|TAFII130|TAFII135|Taf2c1 TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor 0.005405 0.5 -5.886438 chr11-347 chr11 78416933 78417118 + 9.6 NA intron (NM_008702, intron 3 of 10) intron (NM_008702, intron 3 of 10) -50095 NM_133706 69071 Mm.29431 NM_133706 ENSMUSG00000037278 Tmem97 1810014L12Rik|AI115531|AL022956|D11Bhm182e|MGC102369 transmembrane protein 97 0.005405 0.451613 -5.864242 chr11-189 chr11 70654915 70655100 + 15 NA Intergenic ORR1D2|LTR|MaLR -5950 NM_019400 54189 Mm.7087 NM_019400 ENSMUSG00000020817 Rabep1 AA409789|AI481320|AV213537|AW240603|MGC150053|MGC150054|Rab5ep|rabaptin-5 rabaptin, RAB GTPase binding effector protein 1 0.010811 0.473118 -5.852131 chr15-11 chr15 74914104 74914273 + 46.1 NA Intergenic Intergenic 25016 NM_001099217 100041546 Mm.1583 XM_001477071 ENSMUSG00000022584 Ly6c2 Ly-6C.2|MGC103163 lymphocyte antigen 6 complex, locus C2 0.011834 0.429412 -5.801205 chr4-9 chr4 69864445 69864630 + 97.5 NA intron (NM_145990, intron 4 of 36) intron (NM_145990, intron 4 of 36) 32191 NM_145990 214444 Mm.379344 NM_145990 ENSMUSG00000039298 Cdk5rap2 2900018K03Rik|MGC38528|an|mKIAA1633 CDK5 regulatory subunit associated protein 2 0.027027 0.397849 -5.771133 chr8-68 chr8 11969408 11969593 + 19.3 NA Intergenic Intergenic 129008 NM_029326 75528 Mm.440342 NM_029326 ENSMUSG00000031512 1700018L24Rik - RIKEN cDNA 1700018L24 gene 0.016216 0.543011 -5.732102 chr1-61 chr1 166979277 166979462 + 23.6 NA intron (NM_032005, intron 5 of 7) intron (NM_032005, intron 5 of 7) 18079 NM_032005 83993 Mm.190649 NM_032005 ENSMUSG00000026572 Tbx19 AU019250|D1Ertd754e|Tpit T-box 19 0.005405 0.424731 -5.695492 chr12-51 chr12 93294054 93294239 + 22.5 NA Intergenic RLTR3_Mm-int|LTR|ERVK -1039432 NM_011344 20338 Mm.250605 NM_001039089 ENSMUSG00000020964 Sel1l AW493766|KIAA4137|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) 0.005405 0.430108 -5.620886 chr5-39 chr5 151091899 151092026 + 31.1 NA Intergenic Intergenic -129023 NM_013823 16591 Mm.6500 NM_013823 ENSMUSG00000058488 Kl alpha-kl klotho 0.007874 0.421875 -5.613381 chr19-109 chr19 28032775 28032884 + 9.6 NA intron (NM_001166414, intron 1 of 17) intron (NM_001166414, intron 1 of 17) 16116 NM_001166414 19726 Mm.313321 NM_001166414 ENSMUSG00000040929 Rfx3 C230093O12Rik|MRFX3 regulatory factor X, 3 (influences HLA class II expression) 0.009174 0.472727 -5.606301 chr17-87 chr17 45038242 45038303 + 10.7 NA Intergenic Intergenic -1430 NM_008302 15516 Mm.2180 NM_008302 ENSMUSG00000023944 Hsp90ab1 90kDa|AL022974|C81438|Hsp84|Hsp84-1|Hsp90|Hspcb|MGC115780 heat shock protein 90 alpha (cytosolic), class B member 1 0.016393 0.564516 -5.598669 chr13-162 chr13 105080272 105080457 + 9.6 NA Intergenic Intergenic -39468 NM_021563 59079 Mm.277354 NM_001005868 ENSMUSG00000021709 Erbb2ip 1700028E05Rik|Erbin|mKIAA1225 Erbb2 interacting protein 0.021622 0.478495 -5.585293 chr1-329 chr1 138585505 138585690 + 9.6 NA Intergenic Intergenic 144286 NM_001160251 226442 Mm.62521 NM_001160251 ENSMUSG00000041483 Zfp281 MGC70044|MGC7737 zinc finger protein 281 0.027027 0.435484 -5.572631 chr12-6 chr12 67977983 67978168 + 78.2 NA intron (NM_207010, intron 1 of 15) intron (NM_207010, intron 1 of 15) 163079 NM_207010 320772 Mm.481303 NM_001193266 ENSMUSG00000034912 Mdga2 6720489L24Rik|9330209L04Rik|Mamdc1 MAM domain containing glycosylphosphatidylinositol anchor 2 0.021622 0.397849 -5.497073 chr3-168 chr3 118435854 118436039 + 10.7 NA Intergenic Intergenic 10086 NR_029551 387155 NR_029551 Mir137 Mirn137|mmu-mir-137 microRNA 137 0.005405 0.483871 -5.485895 chr6-195 chr6 47578072 47578257 + 9.6 NA Intergenic URR1B|DNA|MER1_type 6516 NR_002841 19799 NR_002841 Rn4.5s - 4.5S RNA 0.016216 0.494624 -5.369615 chr5-235 chr5 23807243 23807307 + 9.6 NA Intergenic Intergenic 39683 NR_030454 735274 NR_030454 Mir684-1 Mirn684-1 microRNA 684-1 0.015625 0.476923 -5.368756 chr8-19 chr8 24561073 24561258 + 45 NA intron (NM_001110783, intron 11 of 43) intron (NM_001110783, intron 11 of 43) 37346 NM_031158 11733 Mm.476804 NM_001110783 ENSMUSG00000031543 Ank1 Ank-1|nb ankyrin 1, erythroid 0.027027 0.365591 -5.31424 chr11-100 chr11 67483938 67484033 + 30 NA intron (NM_001109657, intron 8 of 13) intron (NM_001109657, intron 8 of 13) -27535 NM_009038 19674 Mm.439726 NM_009038 ENSMUSG00000020907 Rcvrn CAR|MGC129468|S-modulin recoverin 0 0.583333 -5.236478 chr7-150 chr7 114102546 114102717 + 12.9 NA Intergenic Intergenic -35334 NM_011965 26440 Mm.121265 NM_011965 ENSMUSG00000030751 Psma1 C2|alpha-type proteasome (prosome, macropain) subunit, alpha type 1 0.017544 0.55814 -5.205615 chrM-6 chrM 14597 14782 + 76.1 NA NA Intergenic NA NA 0.037838 0.462366 -5.202534 chr1-79 chr1 194177533 194177718 + 19.3 NA intron (NM_001038607, intron 10 of 10) intron (NM_001038607, intron 10 of 10) 286030 NM_010600 16510 Mm.4489 NM_001038607 ENSMUSG00000058248 Kcnh1 M-eag|MGC124419|MGC124420 potassium voltage-gated channel, subfamily H (eag-related), member 1 0.021622 0.435484 -5.202534 chr7-146 chr7 109393836 109394021 + 12.9 NA intron (NM_001001326, intron 1 of 19) intron (NM_001001326, intron 1 of 19) 14396 NM_001001326 76954 Mm.252009 NM_001001326 ENSMUSG00000031024 St5 2010004M01Rik|2610305K15Rik suppression of tumorigenicity 5 0.010811 0.516129 -5.202533 chr12-145 chr12 39417180 39417365 + 10.7 NA Intergenic Intergenic 123139 NM_001163154 14009 Mm.4866 NM_001163154 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant gene 1 0.032432 0.537634 -5.126793 chr6-198 chr6 49917036 49917136 + 9.6 NA Intergenic L1MD1|LINE|L1 -122740 NM_019939 56524 Mm.478422 NM_001164733 ENSMUSG00000038388 Mpp6 P55t|Pals2 membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 0 0.39604 -5.084066 chr3-8 chr3 56663409 56663594 + 69.6 NA Intergenic GSAT_MM|Satellite|Satellite -391871 NM_030595 26422 Mm.384353 NM_030595 Nbea Lyst2|mKIAA1544 neurobeachin 0.005405 0.354839 -5.035693 chr18-90 chr18 70225255 70225440 + 12.9 NA intron (NM_001082553, intron 2 of 6) intron (NM_001082553, intron 2 of 6) 41612 NM_001082553 80718 Mm.246753 NM_001082553 ENSMUSG00000024511 Rab27b 2310021G14Rik|B130064M09Rik RAB27b, member RAS oncogene family 0 0.467742 -5.019382 chr2-47 chr2 181847030 181847186 + 35.4 NA Intergenic Intergenic 53343 NM_025901 67005 Mm.306482 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K 0.019231 0.433121 -5.007529 chr5-257 chr5 64858842 64859027 + 9.6 NA Intergenic Intergenic -223723 NM_008453 16599 Mm.439720 NM_008453 ENSMUSG00000029178 Klf3 9930027G08Rik|AL024007|Bklf|MGC151315|Tef-2 Kruppel-like factor 3 (basic) 0.016216 0.521505 -4.999918 chr6-189 chr6 35155386 35155564 + 9.6 NA intron (NM_027513, intron 27 of 42) intron (NM_027513, intron 27 of 42) -27375 NR_015608 67705 Mm.228046 NR_015608 1810058I24Rik AI414869|AI848234 RIKEN cDNA 1810058I24 gene 0.005618 0.418994 -4.999917 chr2-248 chr2 90195876 90196061 + 10.7 NA Intergenic L1Md_F3|LINE|L1 -5510 NM_146263 258330 Mm.330392 NM_146263 Olfr1274-ps GA_x5J8B7W2BV0-3116-4045|MOR228-4|MOR228-5|Olfr1274 olfactory receptor 1274, pseudogene 0.064865 0.591398 -4.970628 chr13-92 chr13 102303845 102304030 + 12.9 NA Intergenic Intergenic -370253 NM_022885 69048 Mm.402215 NM_022885 ENSMUSG00000021629 Slc30a5 1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1 solute carrier family 30 (zinc transporter), member 5 0 0.392473 -4.968549 chr9-158 chr9 46387385 46387570 + 11.8 NA Intergenic Intergenic -277120 NR_015605 73040 Mm.265384 NR_015605 2900052N01Rik AU067665 RIKEN cDNA 2900052N01 gene 0.010811 0.580645 -4.968549 chr11-244 chr11 57443667 57443852 + 11.8 NA Intergenic Intergenic -17877 NM_134189 171212 Mm.271670 NM_134189 ENSMUSG00000020520 Galnt10 AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 0.021622 0.494624 -4.950619 chr7-116 chr7 63878169 63878234 + 13.9 NA Intergenic Intergenic -60336 NM_021366 50794 Mm.240473 NM_021366 ENSMUSG00000052040 Klf13 0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1 Kruppel-like factor 13 0.015385 0.469697 -4.940961 chr16-219 chr16 83924774 83924955 + 10.7 NA Intergenic Intergenic -671867 NR_029565 387173 Mm.261808 NR_029565 Mir155 Mirn155|mmu-mir-155 microRNA 155 0.005525 0.467033 -4.929848 chr1-72 chr1 145709258 145709443 + 20.4 NA Intergenic Intergenic 57017 NM_009061 19735 Mm.28262 NM_009061 ENSMUSG00000026360 Rgs2 GOS8 regulator of G-protein signaling 2 0 0.483871 -4.906235 chr12-216 chr12 116049871 116050045 + 9.6 NA Intergenic Intergenic -445573 NM_001004066 56220 Mm.254997 NM_001004066 ENSMUSG00000042063 Zfp386 KIAA4205|Kzf1|mKIAA4205 zinc finger protein 386 (Kruppel-like) 0 0.4 -4.88476 chr15-83 chr15 10054832 10055017 + 12.9 NA Intergenic Intergenic -67038 NM_011169 19116 Mm.442446 NM_011169 ENSMUSG00000005268 Prlr AI987712|Pr-1|Pr-3|Prlr-rs1 prolactin receptor 0.005405 0.365591 -4.862133 chr8-251 chr8 122246889 122247074 + 9.6 NA Intergenic Intergenic 16467 NM_024219 68196 Mm.358714 NM_024219 ENSMUSG00000031839 Hsbp1 0610007A03Rik|AA408769|Hsp25 heat shock factor binding protein 1 0.027027 0.403226 -4.853086 chr19-71 chr19 25048553 25048738 + 11.8 NA Intergenic Intergenic -17980 NM_028785 76088 Mm.102485 NM_028785 ENSMUSG00000052085 Dock8 1200017A24Rik|5830472H07Rik|A130095G14Rik|AI461977 dedicator of cytokinesis 8 0.010811 0.451613 -4.820787 chr11-278 chr11 55145151 55145285 + 10.7 NA intron (NM_001029988, intron 2 of 22) intron (NM_001029988, intron 2 of 22) 10462 NM_001029988 245827 Mm.339363 NM_001029988 ENSMUSG00000055333 Fat2 Fath2|Gm523|mKIAA0811 FAT tumor suppressor homolog 2 (Drosophila) 0.007463 0.555556 -4.656107 chr2-211 chr2 108710963 108711076 + 11.8 NA Intergenic Intergenic 368110 NM_029790 76894 Mm.330451 NM_029790 ENSMUSG00000057234 Mett5d1 0610027B03Rik|AI303697|AW049952|MGC118452 methyltransferase 5 domain containing 1 0 0.438596 -4.648458 chr12-210 chr12 102513772 102513931 + 9.6 NA Intergenic Intergenic -16617 NM_172152 238384 Mm.312448 NM_172152 ENSMUSG00000041771 Slc24a4 A930002M03Rik|AW492432|NCKX4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 0.006289 0.5 -4.645116 chr16-335 chr16 96841470 96841655 + 9.6 NA intron (NM_031174, intron 11 of 32) intron (NM_031174, intron 11 of 32) 269047 NM_008791 18546 Mm.5023 NM_008791 ENSMUSG00000000159 Pcp4 P16Rimb19|Pcp-4|Pep19 Purkinje cell protein 4 0 0.483871 -4.6207 chr5-173 chr5 54254000 54254185 + 11.8 NA Intergenic Intergenic -32678 NM_001081103 116873 Mm.265985 NM_001081103 ENSMUSG00000039156 Stim2 - stromal interaction molecule 2 0.016216 0.478495 -4.620699 chr18-113 chr18 4980384 4980569 + 10.7 NA Intergenic Intergenic -66110 NM_153153 225115 Mm.136791 NM_153153 ENSMUSG00000024236 Svil AU024053|B430302E16Rik supervillin 0.016216 0.483871 -4.582381 chr11-375 chr11 94029944 94030129 + 9.6 NA exon (NM_009427, exon 2 of 2) exon (NM_009427, exon 2 of 2) 2493 NM_009427 22057 Mm.259673 NM_009427 ENSMUSG00000037573 Tob1 Tob|Trob transducer of ErbB-2.1 0.048649 0.5 -4.567181 chr11-259 chr11 100207279 100207464 + 11.8 NA intron (NM_010593, intron 1 of 13) intron (NM_010593, intron 1 of 13) 6458 NM_010593 16480 Mm.299774 NM_010593 ENSMUSG00000001552 Jup AL022715|AW545708|D930025P04Rik|PG junction plakoglobin 0.005405 0.569892 -4.500543 chr9-52 chr9 50148336 50148521 + 30 NA Intergenic Intergenic -98326 NM_029639 76509 Mm.29959 NM_029639 ENSMUSG00000032068 1600029D21Rik 0610037B23Rik|AA407923|AU043048|PLET1 RIKEN cDNA 1600029D21 gene 0.016216 0.473118 -4.487057 chr3-35 chr3 8229507 8229665 + 24.6 NA Intergenic Intergenic 216585 NR_033512 620966 NR_033512 Gm6194 1700003N22Rik|EG620966 transmembrane protein 189 pseudogene 0.012658 0.333333 -4.472955 chr16-259 chr16 18036514 18036542 + 9.6 NA Intergenic Intergenic -4740 NM_022982 65079 Mm.40149 NM_022982 ENSMUSG00000043811 Rtn4r NOGOR|NgR reticulon 4 receptor 0 0.586207 -4.423164 chr16-229 chr16 94935949 94936134 + 10.7 NA intron (NM_001025590, intron 2 of 2) intron (NM_001025590, intron 2 of 2) 29447 NM_001025590 16522 Mm.328720 NM_001025584 ENSMUSG00000043301 Kcnj6 BIR1|GIRK2|KATP2|KCNJ7|Kir3.2|weaver|wv potassium inwardly-rectifying channel, subfamily J, member 6 0.021622 0.478495 -4.419241 chr18-6 chr18 3005743 3005928 + 58.9 NA Intergenic RLTR11A|LTR|ERVK 117577 NM_001167539 100312476 Mm.480293 NM_001167539 Vmn1r238 - vomeronasal 1 receptor Vmn1r238 0.005405 0.349462 -4.397045 chr16-19 chr16 10888635 10888820 + 45 NA intron (NM_019980, intron 1 of 3) intron (NM_019980, intron 1 of 3) 17972 NM_019980 56722 Mm.294753 NM_019980 ENSMUSG00000022500 Litaf 3222402J11Rik|C85531|N4WBP3|TBX1 LPS-induced TN factor 0.016216 0.397849 -4.394534 chr4-312 chr4 145419182 145419262 + 9.6 NA intron (NM_001085522, intron 1 of 3) intron (NM_001085522, intron 1 of 3) 6571 NM_001085522 433791 Mm.458096 XM_485487 ENSMUSG00000070605 Gm13251 OTTMUSG00000011097 predicted gene 13251 0.0125 0.506173 -4.349663 chr5-118 chr5 135226476 135226661 + 15 NA 3' UTR (NM_024479, exon 6 of 6) 3' UTR (NM_024479, exon 6 of 6) 4993 NM_009903 12740 Mm.7339 NM_009903 ENSMUSG00000047501 Cldn4 Cep-r|Cpetr|Cpetr1 claudin 4 0.016216 0.537634 -4.337398 chr15-128 chr15 12384374 12384525 + 9.6 NA intron (NM_001081064, intron 4 of 23) intron (NM_001081064, intron 4 of 23) 118229 NM_025673 66629 Mm.250936 NM_025673 ENSMUSG00000022200 Golph3 4733401N08Rik|5730410D03Rik|AW413496 golgi phosphoprotein 3 0.013245 0.421053 -4.296546 chr1-258 chr1 192020720 192020905 + 10.7 NA Intergenic Intergenic -149344 NM_008937 19130 Mm.392678 NM_008937 ENSMUSG00000010175 Prox1 A230003G05Rik prospero-related homeobox 1 0.005405 0.467742 -4.290056 chr8-252 chr8 122771682 122771845 + 9.6 NA Intergenic Intergenic 23482 NM_146219 234796 Mm.86446 NM_146219 ENSMUSG00000031828 Klhl36 MGC37805 kelch-like 36 (Drosophila) 0.01227 0.621951 -4.285807 chr1-239 chr1 93702755 93702875 + 10.7 NA Intergenic Intergenic 70933 NM_007855 13345 Mm.9474 NM_007855 ENSMUSG00000007805 Twist2 Dermo1|bHLHa39 twist homolog 2 (Drosophila) 0.025 0.528926 -4.261071 chr13-59 chr13 13263669 13263819 + 16.1 NA intron (NM_010917, intron 4 of 19) intron (NM_010917, intron 4 of 19) 34017 NM_010917 18073 Mm.4691 NM_010917 ENSMUSG00000005397 Nid1 A630025O17|Nid|entactin|entactin-1|nidogen-1 nidogen 1 0.013333 0.450331 -4.25687 chr11-63 chr11 3003891 3004076 + 40.7 NA Intergenic GSAT_MM|Satellite|Satellite -20040 NR_003517 236604 Mm.247625 XM_001471470 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 0.010811 0.376344 -4.245749 chr10-127 chr10 98373474 98373659 + 15 NA intron (NM_026482, intron 1 of 20) intron (NM_026482, intron 1 of 20) 28727 NM_026482 67972 Mm.471912 NM_026482 ENSMUSG00000019943 Atp2b1 2810442I22Rik|E130111D10Rik|Pmca1 ATPase, Ca++ transporting, plasma membrane 1 0.016216 0.435484 -4.236089 chr16-346 chr16 97941067 97941252 + 9.6 NA Intergenic Intergenic -22488 NM_023663 72388 Mm.35290 NM_023663 ENSMUSG00000005251 Ripk4 2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4 receptor-interacting serine-threonine kinase 4 0.005405 0.510753 -4.203965 chrX-58 chrX 165351127 165351312 + 13.9 NA Intergenic Intergenic -28197 NR_029457 654820 Mm.467605 NM_001039559 G530011O06Rik - RIKEN cDNA G530011O06 gene 0.005405 0.510753 -4.180625 chr2-111 chr2 29290500 29290685 + 17.1 NA intron (NM_026896, intron 3 of 7) intron (NM_026896, intron 3 of 7) 121748 NM_026896 68975 Mm.330109 NM_026896 ENSMUSG00000026799 Med27 1500015J03Rik|2310042P07Rik|AA682045|Crsp8|D2Ertd434e mediator complex subunit 27 0.043243 0.462366 -4.167644 chr1-312 chr1 97147519 97147704 + 9.6 NA intron (NM_026321, intron 1 of 2) intron (NM_026321, intron 1 of 2) 3578 NM_026321 67698 Mm.272705 NM_026321 ENSMUSG00000051185 Fam174a 2310044D20Rik|Fam174|Naa6|Tmem157 family with sequence similarity 174, member A 0.010811 0.462366 -4.144451 chr12-218 chr12 118811530 118811715 + 9.6 NA Intergenic Intergenic -66080 NM_001166385 20688 Mm.259312 NM_001166385 ENSMUSG00000025323 Sp4 5730497N03Rik|HF-1b|HF1-b trans-acting transcription factor 4 0.010811 0.408602 -4.117878 chr8-129 chr8 87241118 87241303 + 12.9 NA Intergenic Intergenic -64258 NM_007578 12286 Mm.334658 NM_007578 ENSMUSG00000034656 Cacna1a APCA|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|leaner|nmf352|rkr|rocker|tg|tottering calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 0.005405 0.553763 -4.105345 chr13-156 chr13 100157205 100157390 + 9.6 NA Intergenic Intergenic -72575 NM_027064 69382 Mm.45466 XM_001473501 ENSMUSG00000045022 1700024P04Rik H2bl1|Subh2bv RIKEN cDNA 1700024P04 gene 0.032432 0.521505 -4.075826 chr8-74 chr8 71050645 71050830 + 17.1 NA Intergenic Intergenic -147174 NM_177698 234353 Mm.32525 NM_027626 ENSMUSG00000030465 Psd3 4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D|MGC6957 pleckstrin and Sec7 domain containing 3 0 0.494624 -4.067188 chr19-32 chr19 58166486 58166671 + 21.4 NA intron (NM_181415, intron 28 of 28) intron (NM_181415, intron 28 of 28) 341138 NM_010279 14585 Mm.88367 NM_010279 ENSMUSG00000025089 Gfra1 AU042498 glial cell line derived neurotrophic factor family receptor alpha 1 0.005405 0.537634 -4.030994 chr9-217 chr9 22625643 22625828 + 9.6 NA intron (NM_178415, intron 21 of 22) intron (NM_178415, intron 21 of 22) -347742 NM_028472 73230 Mm.335020 NM_028472 ENSMUSG00000031963 Bmper 3110056H04Rik|CV-2|Crim3|Cv2 BMP-binding endothelial regulator 0.005405 0.44086 -3.97867 chr2-188 chr2 166033713 166033897 + 12.9 NA Intergenic Intergenic 68693 NR_033467 670775 Mm.384326 XM_001478235 Gm11468 OTTMUSG00000001131 predicted gene 11468 0.021739 0.551351 -3.872824 chr12-23 chr12 93295273 93295458 + 41.8 NA Intergenic RLTR3_Mm-int|LTR|ERVK -1040651 NM_011344 20338 Mm.250605 NM_001039089 ENSMUSG00000020964 Sel1l AW493766|KIAA4137|Sel1h|mKIAA4137 sel-1 suppressor of lin-12-like (C. elegans) 0.010811 0.392473 -3.852383 chr2-132 chr2 135843011 135843196 + 16.1 NA intron (NM_172858, intron 3 of 9) intron (NM_172858, intron 3 of 9) 93736 NM_029530 76161 Mm.477854 NM_029530 ENSMUSG00000027270 6330527O06Rik 3110035N03Rik|BAD-LAMP RIKEN cDNA 6330527O06 gene 0.010811 0.392473 -3.852383 chr1-174 chr1 190304602 190304787 + 12.9 NA intron (NM_021408, intron 31 of 70) intron (NM_021408, intron 31 of 70) 341069 NM_021408 22283 Mm.331238 NM_021408 ENSMUSG00000026609 Ush2a A930011D15Rik|A930037M10Rik|Gm676|Gm983|Mush2a|Usherin Usher syndrome 2A (autosomal recessive, mild) homolog (human) 0.005405 0.5 -3.839954 chr13-83 chr13 34454333 34454518 + 12.9 NA Intergenic Intergenic -101778 NM_001033167 73102 Mm.23932 NM_001033167 ENSMUSG00000038267 Slc22a23 3110004L20Rik solute carrier family 22, member 23 0 0.543011 -3.812376 chr11-395 chr11 105995983 105996153 + 9.6 NA intron (NM_028126, intron 2 of 10) intron (NM_028126, intron 2 of 10) 13570 NM_028126 72149 Mm.403722 NM_028126 ENSMUSG00000069631 Strada 2610019A05Rik|6030402H20Rik|AI480680|E130112C09Rik STE20-related kinase adaptor alpha 0 0.444444 -3.763922 chr1-255 chr1 186430208 186430385 + 10.7 NA intron (NM_008250, intron 3 of 3) intron (NM_008250, intron 3 of 3) 2985 NM_008250 15284 Mm.1347 NM_008250 ENSMUSG00000039377 Hlx Hlx1 H2.0-like homeobox 0.022599 0.421348 -3.712477 chr12-180 chr12 33667219 33667404 + 9.6 NA intron (NM_001024478, intron 3 of 19) intron (NM_001024478, intron 3 of 19) 10811 NM_001024478 68764 Mm.447248 NM_001024478 ENSMUSG00000035860 Cdhr3 1110049B09Rik|BB172694|Cdh28 cadherin-related family member 3 0.032432 0.526882 -3.696761 chr5-274 chr5 118563917 118564102 + 9.6 NA Intergenic Intergenic 57753 NM_001081236 76792 Mm.103428 NM_001081236 ENSMUSG00000032840 2410131K14Rik MGC129458|MGC129459 RIKEN cDNA 2410131K14 gene 0.032432 0.462366 -3.67245 chr16-104 chr16 7642669 7642854 + 15 NA Intergenic Intergenic 657606 NM_183188 268859 Mm.434732 NM_021477 ENSMUSG00000008658 A2bp1 A2bp|Hrnbp1|fox-1 ataxin 2 binding protein 1 0.005405 0.397849 -3.574183 chr11-357 chr11 85591969 85592154 + 9.6 NA intron (NM_001166642, intron 23 of 24) intron (NM_001166642, intron 23 of 24) -56748 NM_009324 21385 Mm.287052 NM_009324 ENSMUSG00000000093 Tbx2 - T-box 2 0.021622 0.424731 -3.564474 chr7-156 chr7 139293094 139293279 + 12.9 NA intron (NM_001127363, intron 1 of 15) intron (NM_001127363, intron 1 of 15) 52758 NM_001127363 212111 Mm.28308 NM_001127363 ENSMUSG00000025477 Inpp5a - inositol polyphosphate-5-phosphatase A 0.032432 0.516129 -3.550974 chr5-161 chr5 149051269 149051454 + 12.9 NA promoter-TSS (NR_028285) promoter-TSS (NR_028285) -827 NR_028285 70138 Mm.417834 XM_001473363 2210417A02Rik AV081004 RIKEN cDNA 2210417A02 gene 0.027027 0.505376 -3.547707 chr11-154 chr11 112853877 112854062 + 19.3 NA Intergenic Intergenic 163959 NR_015556 72386 Mm.266961 XM_001472535 2610035D17Rik - RIKEN cDNA 2610035D17 gene 0.010811 0.435484 -3.516887 chr2-257 chr2 135671987 135672172 + 10.7 NA intron (NM_013829, intron 26 of 36) intron (NM_013829, intron 26 of 36) -77288 NM_029530 76161 Mm.477854 NM_029530 ENSMUSG00000027270 6330527O06Rik 3110035N03Rik|BAD-LAMP RIKEN cDNA 6330527O06 gene 0 0.451613 -3.510706 chrX-17 chrX 108487884 108488069 + 27.9 NA intron (NM_026565, intron 8 of 8) intron (NM_026565, intron 8 of 8) 35747 NM_028655 73809 Mm.50508 XM_136025 ENSMUSG00000025527 Satl1 4930404K22Rik spermidine/spermine N1-acetyl transferase-like 1 0 0.516129 -3.491508 chr11-48 chr11 108827882 108828067 + 46.1 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA 91536 NM_015732 12006 Mm.71710 NM_015732 ENSMUSG00000000142 Axin2 Axi1|Axil|Conductin axin2 0.091892 0.639785 -3.473837 chr15-119 chr15 58922315 58922500 + 10.7 NA Intergenic Intergenic -10298 NM_144800 211401 Mm.394414 NM_001146180 ENSMUSG00000022353 Mtss1 2310003N14Rik|BC024131|D130001D01Rik|MGC37896|Mim|mKIAA0429 metastasis suppressor 1 0 0.467742 -3.446224 chr12-12 chr12 38635947 38636132 + 56.8 NA intron (NM_178681, intron 7 of 24) intron (NM_178681, intron 7 of 24) 245069 NM_178681 217480 Mm.126525 NM_178681 ENSMUSG00000036095 Dgkb 6430574F24|90kda|C630029D13Rik|DAGK2|DGK|DGK-beta|mKIAA0718 diacylglycerol kinase, beta 0 0.397849 -3.412087 chr1-97 chr1 51941263 51941448 + 16.1 NA Intergenic Intergenic -11433 NM_011487 20849 Mm.1550 NM_011487 ENSMUSG00000062939 Stat4 - signal transducer and activator of transcription 4 0 0.505376 -3.407388 chr5-64 chr5 129420459 129420644 + 21.4 NA intron (NM_001081342, intron 2 of 25) intron (NM_001081342, intron 2 of 25) 9094 NM_001081342 243277 Mm.440501 NM_001081342 ENSMUSG00000044017 Gpr133 E230012M21Rik G protein-coupled receptor 133 0.005405 0.467742 -3.347148 chr6-124 chr6 30734886 30735055 + 11.8 NA intron (NM_017478, intron 20 of 23) intron (NM_017478, intron 20 of 23) 43662 NR_029900 723930 NR_029900 Mir335 Mirn335|mir-335|mmu-mir-335 microRNA 335 0 0.594118 -3.346966 chr10-189 chr10 50312213 50312398 + 11.8 NA intron (NM_001146089, intron 4 of 41) intron (NM_001146089, intron 4 of 41) 31222 NM_001146089 77987 Mm.222497 XM_125617 ENSMUSG00000038774 Ascc3 ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH activating signal cointegrator 1 complex subunit 3 0.010811 0.387097 -3.306838 chr16-73 chr16 4362675 4362860 + 19.3 NA Intergenic Intergenic -27952 NM_009624 11515 Mm.439750 NM_009624 ENSMUSG00000005580 Adcy9 ACtp10|AW125421|D16Wsu65e|mKIAA0520 adenylate cyclase 9 0.016216 0.494624 -3.288755 chr13-49 chr13 100891037 100891222 + 18.2 NA Intergenic (CA)n|Simple_repeat|Simple_repeat 109805 NM_013732 27220 Mm.75498 NM_001081493 ENSMUSG00000021647 Cartpt Cart CART prepropeptide 0.016216 0.430108 -3.284203 chr12-188 chr12 56271668 56271853 + 9.6 NA intron (NM_025373, intron 4 of 6) intron (NM_025373, intron 4 of 6) -45194 NM_011968 26443 Mm.30210 NM_011968 ENSMUSG00000021024 Psma6 IOTA proteasome (prosome, macropain) subunit, alpha type 6 0.010811 0.413978 -3.257824 chr8-48 chr8 36168946 36169131 + 25.7 NA Intergenic B3A|SINE|B2 -107088 NM_176933 319520 Mm.392187 NM_176933 ENSMUSG00000031530 Dusp4 2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2 dual specificity phosphatase 4 0.005405 0.467742 -3.257823 chr3-198 chr3 69208814 69208985 + 9.6 NA intron (NM_008467, intron 1 of 16) intron (NM_008467, intron 1 of 16) 6122 NM_008467 16649 Mm.30601 NM_008467 ENSMUSG00000027782 Kpna4 1110058D08Rik|IPOA3 karyopherin (importin) alpha 4 0.011696 0.401163 -3.22874 chr2-306 chr2 102401443 102401628 + 9.6 NA intron (NM_173749, intron 3 of 10) intron (NM_173749, intron 3 of 10) 50676 NM_173749 210622 Mm.431895 NM_173749 ENSMUSG00000027188 Pamr1 5930437L24|E430002G05Rik|Ramp peptidase domain containing associated with muscle regeneration 1 0.005405 0.505376 -3.208441 chr7-241 chr7 49063719 49063904 + 9.6 NA intron (NM_001111016, intron 2 of 38) intron (NM_001111016, intron 2 of 38) -50398 NM_175272 78286 Mm.471488 NM_001111016 ENSMUSG00000052512 Nav2 5330421F07Rik|AU067780|BQ960892|HELAD1|POMFIL2|RAINB1|RAINB2|Unc53H2|mKIAA3015 neuron navigator 2 0.021622 0.543011 -3.180853 chr6-88 chr6 86535144 86535329 + 15 NA Intergenic Intergenic -43437 NM_011865 23983 Mm.274146 NM_011865 ENSMUSG00000051695 Pcbp1 WBP17|[a]CP-1|alphaCP-1 poly(rC) binding protein 1 0.016216 0.591398 -3.178924 chr11-231 chr11 104374518 104374703 + 12.9 NA intron (NM_010858, intron 1 of 8) intron (NM_010858, intron 1 of 8) 7858 NM_010858 17896 Mm.390355 NM_010858 ENSMUSG00000061086 Myl4 ALC1|AMLC|ELC|ELC1a|GT1|MLC1a|Myla myosin, light polypeptide 4 0 0.489247 -3.151979 chr2-87 chr2 181860097 181860282 + 22.5 NA Intergenic RLTR33|LTR|ERVK 66424 NM_025901 67005 Mm.306482 NM_025901 ENSMUSG00000038628 Polr3k 12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11 polymerase (RNA) III (DNA directed) polypeptide K 0 0.403226 -3.150049 chr10-132 chr10 126183114 126183299 + 15 NA Intergenic Intergenic 121114 NM_026858 68876 Mm.276769 NM_001159559 ENSMUSG00000025436 Xrcc6bp1 1110068E08Rik|2410012H02Rik XRCC6 binding protein 1 0.005405 0.494624 -3.150049 chr6-159 chr6 56831506 56831691 + 10.7 NA intron (NM_026004, intron 1 of 8) intron (NM_026004, intron 1 of 8) 21912 NM_026004 107569 Mm.158936 NM_026004 ENSMUSG00000029780 Nt5c3 1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36 5'-nucleotidase, cytosolic III 0.027027 0.526882 -3.150049 chr11-282 chr11 71820098 71820283 + 10.7 NA Intergenic Intergenic 33514 NM_053245 114230 Mm.95707 NM_053245 ENSMUSG00000040554 Aipl1 A930007I01Rik|MGC25485 aryl hydrocarbon receptor-interacting protein-like 1 0.005405 0.55914 -3.114431 chr6-182 chr6 8786658 8786843 + 9.6 NA Intergenic L2|LINE|L2 -58266 NM_010492 15893 Mm.275683 NM_010492 ENSMUSG00000062995 Ica1 69kDa|ICA69 islet cell autoantigen 1 0 0.397849 -3.079077 chr12-80 chr12 41133331 41133515 + 15 NA intron (NM_172803, intron 2 of 52) intron (NM_172803, intron 2 of 52) 176948 NM_172803 238130 Mm.341423 NM_172803 ENSMUSG00000035954 Dock4 5330406C03|6330411N01Rik|AF263288|C030023J22|mKIAA0716 dedicator of cytokinesis 4 0 0.491892 -3.047014 chr16-40 chr16 21116448 21116633 + 26.8 NA Intergenic Intergenic -2237 NM_010143 13845 Mm.6972 NM_010143 ENSMUSG00000005958 Ephb3 AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6 Eph receptor B3 0.010811 0.543011 -2.93544 chr1-92 chr1 135822897 135823082 + 17.1 NA Intergenic Intergenic -30936 NM_021355 14264 Mm.287146 NM_021355 ENSMUSG00000041559 Fmod AI131919|AU041740|SLRR2E fibromodulin 0.016216 0.532258 -2.889672 chr3-53 chr3 152432124 152432309 + 20.4 NA intron (NM_001081277, intron 10 of 13) intron (NM_001081277, intron 10 of 13) 98137 NM_198416 108946 Mm.379292 NM_001080755 ENSMUSG00000039068 Zzz3 3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514 zinc finger, ZZ domain containing 3 0.021622 0.489247 -2.87919 chr6-188 chr6 31320528 31320657 + 9.6 NA Intergenic Intergenic -8398 NM_013791 27418 Mm.440531 NM_013791 ENSMUSG00000025609 Mkln1 A130067F06Rik|AU015903|BB154892 muskelin 1, intracellular mediator containing kelch motifs 0.031008 0.523077 -2.862083 chr6-100 chr6 43273285 43273435 + 13.9 NA Intergenic Intergenic -34199 NM_130869 18291 Mm.17715 NM_130869 ENSMUSG00000029736 Nobox OG2|Og2x NOBOX oogenesis homeobox 0.02 0.423841 -2.857341 chr5-196 chr5 14984041 14984226 + 10.7 NA 5' UTR (NR_001584, exon 4 of 4) 5' UTR (NR_001584, exon 4 of 4) 32834 NR_001584 74062 Mm.459025 NR_001584 Speer8-ps1 4933405L09Rik|SPEER-8|Speer8-ps spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 0.005405 0.446237 -2.847773 chr7-274 chr7 114428397 114428582 + 9.6 NA promoter-TSS (NM_007587) promoter-TSS (NM_007587) -983 NM_001033954 12310 Mm.4361 NM_001033954 ENSMUSG00000030669 Calca CA|CGRP-1|CGRP1|Calc|Calc1|Cgrp|Ct|Ctn|calcitonin calcitonin/calcitonin-related polypeptide, alpha 0.005405 0.543011 -2.807524 chr13-118 chr13 45263253 45263420 + 10.7 NA Intergenic Intergenic -137377 NM_153789 218203 Mm.481228 NM_153789 ENSMUSG00000038175 Mylip 9430057C20Rik|MGC11702|Mir myosin regulatory light chain interacting protein 0 0.470238 -2.763849 chr10-226 chr10 40441378 40441542 + 10.7 NA intron (NM_177793, intron 4 of 4) intron (NM_177793, intron 4 of 4) 69722 NM_177793 327747 Mm.80407 NM_177793 ENSMUSG00000045555 9030224M15Rik - RIKEN cDNA 9030224M15 gene 0.006098 0.436364 -2.763849 chr2-21 chr2 168223318 168223503 + 57.9 NA intron (NM_001037177, intron 5 of 6) intron (NM_001037177, intron 5 of 6) 57986 NM_001136073 18019 Mm.116802 NM_001037177 ENSMUSG00000027544 Nfatc2 AI607462|NF-ATc2|NFAT1|NFAT1-D|Nfatp nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.027027 0.473118 -2.7628 chr3-76 chr3 31270467 31270652 + 16.1 NA Intergenic Intergenic -15379 NM_011386 20482 Mm.15406 NM_001039090 ENSMUSG00000027660 Skil 9130011J04Rik|Skir|SnoN|SnoN2|sno|sno-dE3 SKI-like 0.010811 0.505376 -2.760415 chr12-40 chr12 75130890 75131075 + 26.8 NA intron (NM_172804, intron 2 of 6) intron (NM_172804, intron 2 of 6) -72131 NR_030734 74284 Mm.287421 XM_358420 1700086L19Rik 1700006L05Rik|AU016007 RIKEN cDNA 1700086L19 gene 0.005405 0.467742 -2.693635 chr7-277 chr7 115618944 115619112 + 9.6 NA intron (NM_001025560, intron 2 of 15) intron (NM_001025560, intron 2 of 15) 167207 NM_011445 20679 Mm.323365 NM_001025559 ENSMUSG00000051910 Sox6 AI987981 SRY-box containing gene 6 0.005952 0.426035 -2.681479 chr15-142 chr15 54696610 54696795 + 9.6 NA intron (NM_001136077, intron 15 of 25) intron (NM_001136077, intron 15 of 25) 53342 NM_001136077 18606 Mm.250256 NM_001136077 ENSMUSG00000022425 Enpp2 ATX|Npps2|PD-Ialpha|Pdnp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 0.027027 0.516129 -2.681479 chr18-11 chr18 22792496 22792681 + 37.5 NA Intergenic Intergenic 304490 NM_001167777 211961 Mm.392310 XM_001474902 ENSMUSG00000045215 Asxl3 C230079D11Rik|D430002O22Rik|D930044O18Rik|Gm329|Gm945 additional sex combs like 3 (Drosophila) 0 0.467742 -2.646942 chr13-46 chr13 63915797 63915982 + 18.2 NA Intergenic Intergenic 91334 NM_023507 76251 Mm.186610 NM_001013608 ENSMUSG00000021470 0610007P08Rik 1700019D06Rik|9330134C04Rik|MGC100170|Rad26l|Sr278 RIKEN cDNA 0610007P08 gene 0.005405 0.575269 -2.629466 chr1-214 chr1 37182226 37182406 + 10.7 NA intron (NM_009918, intron 2 of 5) intron (NM_009918, intron 2 of 5) 18510 NM_009918 12790 Mm.214224 NM_009918 ENSMUSG00000026114 Cnga3 CNG3 cyclic nucleotide gated channel alpha 3 0.005556 0.447514 -2.629235 chr16-160 chr16 25367432 25367611 + 11.8 NA Intergenic Intergenic 165356 NM_175165 71338 Mm.126851 NM_175165 ENSMUSG00000048399 Tprg 5430420C16Rik|Tprg1 transformation related protein 63 regulated 0.01676 0.411111 -2.607763 chr4-316 chr4 146442896 146443081 + 9.6 NA Intergenic Intergenic 43320 NM_145078 112422 Mm.441475 NM_145078 2610305D13Rik - RIKEN cDNA 2610305D13 gene 0 0.387097 -2.607762 chr1-262 chr1 6719536 6719674 + 9.6 NA promoter-TSS (NM_173868) promoter-TSS (NM_173868) -526 NM_173868 240690 Mm.234612 NM_173868 ENSMUSG00000033740 St18 AV348974|Myt3|NZF-3|Nzf3|mKIAA0535 suppression of tumorigenicity 18 0.036232 0.52518 -2.605888 chr8-131 chr8 93260103 93260288 + 12.9 NA Intergenic Intergenic -21838 NM_172913 244579 Mm.302755 NM_172913 ENSMUSG00000043668 Tox3 500-9|BC052044|C230068E13|CAGF9|Tnrc9 TOX high mobility group box family member 3 0.010811 0.55914 -2.599948 chr4-284 chr4 105318232 105318374 + 9.6 NA Intergenic Intergenic -495841 NM_183225 329908 Mm.234544 XM_001473472 ENSMUSG00000028514 Usp24 2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851 ubiquitin specific peptidase 24 0.014085 0.461538 -2.599948 chr3-22 chr3 5843658 5843843 + 33.2 NA Intergenic LSU-rRNA_Hsa|rRNA|rRNA -284438 NM_001163302 19302 Mm.132336 NM_001163301 ENSMUSG00000040374 Pxmp3 35kDa|D3Ertd138e|PMP35|Pex2 peroxisomal membrane protein 3 0.097297 0.639785 -2.584945 chr8-56 chr8 73129209 73129335 + 22.5 NA intron (NM_001007570, intron 1 of 7) intron (NM_001007570, intron 1 of 7) 11998 NM_001007570 73095 Mm.185413 NM_001007570 ENSMUSG00000002346 Slc25a42 2900084M01Rik|MGC37808 solute carrier family 25, member 42 0.015873 0.519685 -2.544392 chr8-227 chr8 48387718 48387903 + 9.6 NA Intergenic Intergenic -97931 NM_177304 320981 Mm.211429 NM_177304 ENSMUSG00000038173 Enpp6 4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 0.005405 0.473118 -2.544392 chr14-2 chr14 18209631 18209698 + 114.6 NA Intergenic GSAT_MM|Satellite|Satellite 183619 NM_001024706 432825 Mm.477076 NM_001024706 Gm5458 EG432825 predicted gene 5458 0 0.338235 -2.524134 chr5-67 chr5 146565296 146565481 + 21.4 NA intron (NM_153599, intron 2 of 12) intron (NM_153599, intron 2 of 12) 29480 NM_153599 264064 Mm.260576 NM_153599 ENSMUSG00000029635 Cdk8 MGC37111 cyclin-dependent kinase 8 0.07027 0.564516 -2.523569 chr17-74 chr17 72700676 72700861 + 11.8 NA Intergenic Intergenic -40935 NM_027166 383295 Mm.277533 NM_027166 ENSMUSG00000039770 Ypel5 2310076K21Rik|CGI-127 yippee-like 5 (Drosophila) 0.027027 0.456989 -2.523569 chr8-147 chr8 27628035 27628220 + 11.8 NA exon (NM_199042, exon 3 of 3) exon (NM_199042, exon 3 of 3) 4414 NM_199042 73754 Mm.383241 NM_199042 ENSMUSG00000037214 Thap1 4833431A01Rik|AW490810 THAP domain containing, apoptosis associated protein 1 0.032432 0.569892 -2.518273 chr5-98 chr5 16303362 16303547 + 16.1 NA Intergenic Intergenic 238081 NM_010427 15234 Mm.267078 NM_010427 ENSMUSG00000028864 Hgf C230052L06Rik|HGF/SF|NK1|NK2|SF/HGF hepatocyte growth factor 0.010811 0.413978 -2.51197 chr11-238 chr11 118027866 118027999 + 12.9 NA intron (NM_001112699, intron 1 of 12) intron (NM_001112699, intron 1 of 12) 900 NM_001112700 19157 Mm.86413 NM_001112699 ENSMUSG00000017132 Cyth1 CLM1|CTH-1|CYTIP|KIAA4240|Pscd1|mKIAA4240 cytohesin 1 0 0.529851 -2.496032 chr11-121 chr11 107578311 107578496 + 23.6 NA intron (NM_019431, intron 1 of 3) intron (NM_019431, intron 1 of 3) 32151 NM_019431 54377 Mm.103724 NM_019431 ENSMUSG00000020723 Cacng4 AI413107|AW491861 calcium channel, voltage-dependent, gamma subunit 4 0.016216 0.489247 -2.465416 chr15-90 chr15 59444976 59445161 + 12.9 NA Intergenic Intergenic -33266 NM_144549 211770 Mm.40298 NM_144549 ENSMUSG00000032501 Trib1 A530090O15Rik|TRB-1|Trb1 tribbles homolog 1 (Drosophila) 0.016216 0.510753 -2.424863 chr11-400 chr11 113337507 113337692 + 9.6 NA intron (NM_001166503, intron 4 of 9) intron (NM_001166503, intron 4 of 9) 44306 NM_001166503 69806 Mm.341021 NM_001166503 ENSMUSG00000041654 Slc39a11 1810074D23Rik solute carrier family 39 (metal ion transporter), member 11 0.027027 0.424731 -2.335121 chr13-142 chr13 63092278 63092463 + 9.6 NA intron (NM_028079, intron 4 of 14) intron (NM_028079, intron 4 of 14) 67814 NM_028079 72061 Mm.188105 NM_028079 ENSMUSG00000021458 2010111I01Rik 2300006M17Rik|Aopep RIKEN cDNA 2010111I01 gene 0.010811 0.483871 -2.335121 chr10-204 chr10 87821956 87822141 + 11.8 NA intron (NM_001004164, intron 1 of 20) intron (NM_001004164, intron 1 of 20) 12838 NM_001004164 432486 Mm.335190 NM_001004164 ENSMUSG00000035311 Gnptab EG432486|KIAA1208|MGC79224|mKIAA1208 N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 0.005405 0.467742 -2.310408 chr10-153 chr10 12863200 12863385 + 12.9 NA intron (NM_029172, intron 1 of 5) intron (NM_029172, intron 1 of 5) 4929 NM_029172 75122 Mm.159433 XM_125512 ENSMUSG00000019815 Fam164b 4930519B02Rik family with sequence similarity 164, member B 0.027027 0.526882 -2.225334 chr13-106 chr13 97745252 97745437 + 11.8 NA Intergenic Lx9|LINE|L1 26291 NM_008255 15357 Mm.479532 NM_008255 ENSMUSG00000021670 Hmgcr HMG-CoAR|MGC103269|Red 3-hydroxy-3-methylglutaryl-Coenzyme A reductase 0.005405 0.424731 -2.206319 chrX-67 chrX 19741328 19741513 + 11.8 NA Intergenic Intergenic -33041 NM_001167775 236732 Mm.475412 NM_001167775 ENSMUSG00000031060 Rbm10 E430039K10Rik|MGC7826 RNA binding motif protein 10 0.005405 0.44086 -2.182165 chr4-67 chr4 41818961 41819146 + 19.3 NA intron (NM_175138, intron 15 of 19) intron (NM_175138, intron 15 of 19) 9920 NM_027147 69638 Mm.372459 XM_001473388 Enho 1110065P19Rik|2310040A07Rik energy homeostasis associated 0.016216 0.505376 -2.173321 chr5-128 chr5 73382854 73383039 + 13.9 NA intron (NM_177136, intron 17 of 19) intron (NM_177136, intron 17 of 19) 64628 NM_177136 72313 Mm.480322 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|AI930088|mKIAA0826 furry homolog-like (Drosophila) 0.010811 0.55914 -2.102404 chr13-132 chr13 28432246 28432431 + 9.6 NA Intergenic Intergenic 282390 NM_023746 28078 Mm.155058 NM_023746 ENSMUSG00000017064 Prl5a1 1600013P04Rik|D13Wsu14e|PLP-L|Prlpl|RP23-231P12.2 prolactin family 5, subfamily a, member 1 0.016216 0.462366 -2.032 chr10-264 chr10 116915640 116915825 + 10.7 NA Intergenic L1M5|LINE|L1 -116759 NM_027468 70574 Mm.339332 XM_917914 ENSMUSG00000020183 Cpm 1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik|MGC118152 carboxypeptidase M 0.027027 0.424731 -2.01587 chr4-147 chr4 55562794 55562979 + 12.9 NA Intergenic Intergenic -9311 NM_010637 16600 Mm.4325 NM_010637 ENSMUSG00000003032 Klf4 EZF|Gklf|Zie Kruppel-like factor 4 (gut) 0.010811 0.387097 -1.945939 chr16-188 chr16 5510204 5510389 + 10.7 NA Intergenic Intergenic -289817 NM_021477 268859 Mm.434732 NM_021477 ENSMUSG00000008658 A2bp1 A2bp|Hrnbp1|fox-1 ataxin 2 binding protein 1 0 0.494624 -1.933603 chr6-225 chr6 96222537 96222722 + 9.6 NA intron (NM_182808, intron 2 of 4) intron (NM_182808, intron 2 of 4) -90961 NR_003643 78482 Mm.391486 NR_003643 1700123L14Rik MGC176152 nucleoporin 50 pseudogene 0.005405 0.446237 -1.839461 chr9-206 chr9 102361334 102361519 + 10.7 NA promoter-TSS (NM_024291) promoter-TSS (NM_024291) -974 NM_024291 16716 Mm.101692 NM_024291 ENSMUSG00000035606 Ky CD1|D9Mgc44e|ky kyphoscoliosis peptidase 0 0.526882 -1.798989 chr10-181 chr10 98870824 98871009 + 12.9 NA Intergenic Intergenic 177998 NM_026268 67603 Mm.1791 NM_026268 ENSMUSG00000019960 Dusp6 1300019I03Rik|MGC98540|MKP-3|MKP3|PYST1 dual specificity phosphatase 6 0.016216 0.494624 -1.771401 chr11-397 chr11 108344330 108344515 + 9.6 NA intron (NM_029606, intron 17 of 27) intron (NM_029606, intron 17 of 27) 103067 NM_029606 76380 Mm.344071 NM_029586 ENSMUSG00000020728 Ccdc46 1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351 coiled-coil domain containing 46 0.021622 0.451613 -1.770278 chr1-133 chr1 127926773 127926958 + 13.9 NA intron (NM_172484, intron 8 of 14) intron (NM_172484, intron 8 of 14) -187105 NM_145100 72585 Mm.479965 NM_145100 ENSMUSG00000026344 Lypd1 2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1 Ly6/Plaur domain containing 1 0.016216 0.408602 -1.76394 chr12-193 chr12 73979788 73979973 + 9.6 NA Intergenic Intergenic -14330 NM_009189 20471 Mm.4645 NM_009189 ENSMUSG00000051367 Six1 BB138287 sine oculis-related homeobox 1 homolog (Drosophila) 0.010811 0.430108 -1.76394 chr4-178 chr4 80420934 80421119 + 11.8 NA intron (NM_026821, intron 1 of 1) intron (NM_026821, intron 1 of 1) 39110 NM_026821 52829 Mm.273986 NM_026821 ENSMUSG00000048706 D4Bwg0951e 1110029A09Rik|AV077978|AV175137|WI-13707|bM350F23.1 DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed 0 0.44086 -1.705159 chr19-70 chr19 17078570 17078755 + 11.8 NA intron (NM_181348, intron 4 of 19) intron (NM_181348, intron 4 of 19) 55526 NM_181348 353211 Mm.480716 NM_181348 Prune2 6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|KIAA0367|mKIAA0367 prune homolog 2 (Drosophila) 0.010811 0.446237 -1.67203 chr16-70 chr16 95960251 95960436 + 20.4 NA Intergenic Intergenic 135470 NM_019537 56088 Mm.396248 NM_019537 ENSMUSG00000022913 Psmg1 AW552102|Dscr2 proteasome (prosome, macropain) assembly chaperone 1 0 0.521505 -1.60588 chr3-131 chr3 98054094 98054279 + 11.8 NA Intergenic Intergenic 38609 NM_001033779 433632 Mm.212421 NM_001033779 ENSMUSG00000074388 Gm5544 EG433632 predicted gene 5544 0.005405 0.462366 -1.569388 chr5-34 chr5 68210924 68210989 + 33.2 NA Intergenic Intergenic -84390 NM_009727 11980 Mm.153230 NM_001038999 ENSMUSG00000037685 Atp8a1 AI481521|AI853962|APLT|AW743152|AW822227|Atp3a2|B230107D19Rik|ClassI|KIAA4233|mKIAA4233 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0 0.5 -1.562204 chr5-144 chr5 15202789 15202974 + 12.9 NA intron (NR_001585, intron 1 of 4) intron (NR_001585, intron 1 of 4) 10348 NR_001585 75858 Mm.382859 NR_001585 Speer7-ps1 4930568L21Rik|SPEER-7|Speer7-ps spermatogenesis associated glutamate (E)-rich protein 7, pseudogene 1 0.016216 0.462366 -1.562204 chr13-167 chr13 111764675 111764860 + 9.6 NA Intergenic Intergenic 248846 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 (Drosophila) 0.027027 0.516129 -1.550644 chr4-250 chr4 11823668 11823853 + 9.6 NA Intergenic Intergenic 69100 NM_001098231 381511 Mm.331489 NM_001033453 ENSMUSG00000049225 Pdp1 Gm1024|Ppm2c pyruvate dehyrogenase phosphatase catalytic subunit 1 0.010811 0.532258 -1.550643 chr10-197 chr10 69435201 69435386 + 11.8 NA Intergenic MIRb|SINE|MIR -57184 NM_001111121 76551 Mm.281741 XM_618775 ENSMUSG00000048701 Ccdc6 2810012H18Rik|AA536681|AA960498|AW061011 coiled-coil domain containing 6 0.027027 0.456989 -1.539913 chr13-63 chr13 3372328 3372513 + 15 NA Intergenic Intergenic -105128 NR_015522 76937 Mm.296923 XM_001472242 2810429I04Rik AI256682 RIKEN cDNA 2810429I04 gene 0.005405 0.408602 -1.534616 chr1-104 chr1 128194217 128194395 + 16.1 NA intron (NM_176957, intron 5 of 12) intron (NM_176957, intron 5 of 12) 126167 NM_172484 210356 Mm.377234 NM_001081756 ENSMUSG00000049690 Nckap5 8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|MGC90557|Nap5 NCK-associated protein 5 0.016854 0.441341 -1.512486 chr13-79 chr13 26160632 26160817 + 12.9 NA Intergenic Intergenic 616906 NM_008232 15192 Mm.7411 NM_008232 ENSMUSG00000045835 Hdgfl1 4921520N01Rik|HRP-1|Hdgfrp1|MGC118278|MGC144483|MGC144484|Pwwp1 hepatoma derived growth factor-like 1 0.005405 0.397849 -1.482968 chr10-61 chr10 41168508 41168693 + 23.6 NA intron (NM_138315, intron 6 of 23) intron (NM_138315, intron 6 of 23) 3872 NM_138315 171580 Mm.290431 NM_001164433 ENSMUSG00000019823 Mical1 MGC27831|MGC38321|MICAL|Nical microtubule associated monoxygenase, calponin and LIM domain containing 1 0.010811 0.580645 -1.466927 chr1-213 chr1 32589653 32589824 + 10.7 NA intron (NM_133235, intron 8 of 8) intron (NM_133235, intron 8 of 8) -97899 NM_001164286 408191 Mm.479439 XM_887934 ENSMUSG00000067716 Gm5415 EG408191|Senp14 predicted gene 5415 0 0.540698 -1.464997 chr11-216 chr11 20246498 20246683 + 12.9 NA Intergenic Intergenic -13874 NM_018861 55963 Mm.6379 NM_018861 ENSMUSG00000020142 Slc1a4 ASCT-1|ASCT1|AW045657|SATT solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 0.005405 0.483871 -1.45371 chr7-259 chr7 89267056 89267241 + 9.6 NA Intergenic Intergenic -12409 NM_008055 14366 Mm.86755 NM_008055 ENSMUSG00000049791 Fzd4 Fz4 frizzled homolog 4 (Drosophila) 0.005405 0.446237 -1.400526 chr15-57 chr15 5845343 5845454 + 17.1 NA Intergenic Intergenic -401605 NM_001008702 13132 Mm.240830 NM_001008702 ENSMUSG00000022150 Dab2 5730435J12Rik|AA960054|AI957090|D15Wsu122e|D630005B22Rik|Doc-2|Doc2|p96 disabled homolog 2 (Drosophila) 0 0.428571 -1.3833 chr10-209 chr10 96120760 96120945 + 11.8 NA intron (NR_030554, intron 1 of 3) intron (NR_030554, intron 1 of 3) 9056 NR_030554 100124472 NR_030554 Mir297a-6 Mirn297a-6 microRNA 297a-6 0.005405 0.424731 -1.377872 chr1-331 chr1 145581307 145581440 + 9.6 NA Intergenic Intergenic 41878 NM_019562 56207 Mm.261004 NM_001159866 ENSMUSG00000018189 Uchl5 5830413B11Rik|Uch37 ubiquitin carboxyl-terminal esterase L5 0.015038 0.447761 -1.377122 chr1-195 chr1 123157005 123157190 + 11.8 NA intron (NM_178082, intron 1 of 5) intron (NM_178082, intron 1 of 5) -1789 NM_133748 72999 Mm.27136 NM_133748 ENSMUSG00000003721 Insig2 2900053I11Rik|C730043J18Rik|Insig-2 insulin induced gene 2 0.010811 0.467742 -1.349534 chr15-74 chr15 101256598 101256750 + 15 NA TTS (NM_033073) TTS (NM_033073) 10164 NM_001003668 406219 Mm.347934 NM_001003668 ENSMUSG00000047641 Krt83 Krt2-25 keratin 83 0 0.496732 -1.247262 chr13-168 chr13 111786374 111786559 + 9.6 NA Intergenic Intergenic 270545 NM_152804 20620 Mm.380 NM_152804 ENSMUSG00000021701 Plk2 Snk polo-like kinase 2 (Drosophila) 0 0.451613 -1.247262 chr15-47 chr15 64488450 64488635 + 19.3 NA Intergenic Intergenic 263427 NM_009623 11514 Mm.1425 NM_009623 ENSMUSG00000022376 Adcy8 AC8|AW060868 adenylate cyclase 8 0.021622 0.494624 -1.245212 chr4-155 chr4 127947785 127947970 + 12.9 NA Intergenic Intergenic 164525 NM_177758 269585 Mm.153291 NM_177758 ENSMUSG00000061894 Zscan20 C130001F22|MGC30798|Zfp31|Zkscan20 zinc finger and SCAN domains 20 0.010811 0.456989 -1.226512 chr10-26 chr10 91162139 91162324 + 46.1 NA Intergenic Intergenic 339753 NR_029812 723955 NR_029812 Mir135a-2 Mirn135a-2 microRNA 135a-2 0.021622 0.505376 -1.126203 chr3-19 chr3 100110163 100110348 + 37.5 NA intron (NM_028892, intron 4 of 48) intron (NM_028892, intron 4 of 48) 95778 NM_028892 74362 Mm.55847 XM_001471972 ENSMUSG00000027867 Spag17-ps 4931427F14Rik|PF6|Spag17 sperm associated antigen 17, pseudogene 0.021622 0.370968 -1.081755 chr13-135 chr13 37674057 37674211 + 9.6 NA Intergenic Intergenic -159369 NM_026830 68750 Mm.478821 NM_001013392 ENSMUSG00000039087 Rreb1 1110037N09Rik|AA414966|B930013M22Rik ras responsive element binding protein 1 0.025974 0.503226 -1.059678 chr17-102 chr17 11464532 11464717 + 9.6 NA intron (NM_016694, intron 6 of 11) intron (NM_016694, intron 6 of 11) -498017 NM_026644 68262 Mm.258300 NM_026644 ENSMUSG00000023827 Agpat4 1500003P24Rik 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) 0.021622 0.451613 -1.059678 chr10-148 chr10 90743281 90743466 + 13.9 NA Intergenic MIRb|SINE|MIR -141992 NM_001080130 21917 Mm.439157 NM_001080129 ENSMUSG00000019961 Tmpo 5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP thymopoietin 0.010811 0.413978 -1.032089 chr8-158 chr8 122433177 122433362 + 11.8 NA intron (NM_001167910, intron 2 of 22) intron (NM_001167910, intron 2 of 22) 11469 NM_001167910 56453 Mm.206934 NM_001167910 ENSMUSG00000031835 Mbtps1 0610038M03Rik|AV003995|S1P|SKI-1|Ski1|mKIAA0091 membrane-bound transcription factor peptidase, site 1 0.027027 0.5 -1.003844 chr9-190 chr9 53119037 53119222 + 10.7 NA intron (NM_176846, intron 4 of 5) intron (NM_176846, intron 4 of 5) -27288 NM_212445 68304 Mm.427519 NM_212445 ENSMUSG00000034487 Kdelc2 2010004J24Rik|4833410J10Rik|AW549401 KDEL (Lys-Asp-Glu-Leu) containing 2 0.016216 0.478495 -0.994253 chr11-59 chr11 3001975 3002160 + 41.8 NA Intergenic GSAT_MM|Satellite|Satellite -21956 NR_003517 236604 Mm.247625 XM_001471470 Pisd-ps1 - phosphatidylserine decarboxylase, pseudogene 1 0.010811 0.360215 -0.981627 chr7-99 chr7 93463395 93463580 + 15 NA Intergenic Intergenic 72144 NR_033762 12031 NR_033762 Bc1 - brain cytoplasmic RNA 1 0 0.478495 -0.912948 chr12-65 chr12 39452386 39452571 + 18.2 NA Intergenic Intergenic 158345 NM_001163154 14009 Mm.4866 NM_001163154 ENSMUSG00000004151 Etv1 ER81|Etsrp81 ets variant gene 1 0.010811 0.376344 -0.909891 chr2-89 chr2 173777493 173777678 + 21.4 NA Intergenic Intergenic 24296 NM_213733 228961 Mm.295629 NM_213733 ENSMUSG00000039263 Npepl1 BC023239|C85514|mKIAA1974 aminopeptidase-like 1 0.010811 0.462366 -0.893383 chr1-152 chr1 57434613 57434798 + 12.9 NA Intergenic Intergenic -83485 NM_001037742 68736 Mm.288490 NM_001037742 ENSMUSG00000048495 1110034B05Rik FLJ37953|MGC117744 RIKEN cDNA 1110034B05 gene 0.010811 0.413978 -0.84489 chr12-194 chr12 74009813 74009952 + 9.6 NA Intergenic Intergenic 22201 NM_011382 20474 Mm.249575 NM_011382 ENSMUSG00000034460 Six4 AI047561|AREC3|TrexBF sine oculis-related homeobox 4 homolog (Drosophila) 0.007194 0.407143 -0.788899 chr13-77 chr13 101193431 101193616 + 13.9 NA intron (NM_001081061, intron 5 of 38) intron (NM_001081061, intron 5 of 38) 10804 NM_001081061 544971 Mm.288546 XM_001474306 ENSMUSG00000049658 Bdp1 AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|KIAA1241|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.016216 0.408602 -0.774266 chr10-147 chr10 85085807 85085992 + 13.9 NA intron (NM_001017525, intron 14 of 14) intron (NM_001017525, intron 14 of 14) 57690 NM_001017525 74007 Mm.36544 NM_001017525 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 0.010811 0.537634 -0.701022 chr4-296 chr4 129136304 129136489 + 9.6 NA intron (NM_001005506, intron 4 of 9) intron (NM_001005506, intron 4 of 9) 6548 NM_001005506 109658 Mm.268863 NM_001005506 ENSMUSG00000053841 Txlna 2600010N21Rik|AI425952|AW209241|Il14|MGC77972|MGC86145|Txln taxilin alpha 0.016216 0.548387 -0.688279 chr1-71 chr1 179312573 179312758 + 21.4 NA Intergenic Intergenic 30170 NM_013915 30928 Mm.480309 NM_001012330 ENSMUSG00000063659 Zfp238 RP58|Znf238 zinc finger protein 238 0.010811 0.473118 -0.622578 chr3-115 chr3 103771898 103772082 + 12.9 NA Intergenic Intergenic 67649 NM_018800 54524 Mm.88818 NM_018800 ENSMUSG00000027849 Syt6 3110037A08Rik|AW048930 synaptotagmin VI 0 0.52973 -0.622578 chr13-66 chr13 54434999 54435184 + 15 NA Intergenic Intergenic 43371 NM_028597 73666 Mm.292487 NM_028597 ENSMUSG00000025872 Thoc3 2410044K02Rik|AL033344 THO complex 3 0 0.553763 -0.599239 chrX-49 chrX 37363348 37363533 + 13.9 NA Intergenic Intergenic -282490 NM_016886 53623 Mm.327681 NM_016886 ENSMUSG00000001986 Gria3 2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3|KIAA4184|mKIAA4184 glutamate receptor, ionotropic, AMPA3 (alpha 3) 0.005405 0.408602 -0.560861 chr13-91 chr13 98063650 98063835 + 12.9 NA Intergenic Intergenic 38355 NM_001166065 218476 Mm.297584 XM_975059 Gcnt4 C2gnt3|Gm279|Gm73 glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase) 0.005405 0.456989 -0.560861 chr5-261 chr5 73372201 73372386 + 9.6 NA exon (NM_028194, exon 27 of 63) exon (NM_028194, exon 27 of 63) 75281 NM_177136 72313 Mm.480322 NM_028194 ENSMUSG00000070733 Fryl 2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|AI930088|mKIAA0826 furry homolog-like (Drosophila) 0.043243 0.451613 -0.532715 chr3-97 chr3 33326193 33326378 + 13.9 NA intron (NM_001163516, intron 1 of 12) intron (NM_001163516, intron 1 of 12) 8346 NM_001163516 58869 Mm.151332 NM_001163516 ENSMUSG00000027674 Pex5l 1700016J08Rik|PXR2|Pex2|TRIP8b peroxisomal biogenesis factor 5-like 0.005405 0.344086 -0.505136 chr2-95 chr2 69047181 69047366 + 19.3 NA intron (NM_021022, intron 25 of 27) intron (NM_021022, intron 25 of 27) 26437 NM_021331 14378 Mm.140768 NM_021331 ENSMUSG00000005232 G6pc2 G6pc-rs|IGRP glucose-6-phosphatase, catalytic, 2 0.016216 0.435484 -0.489442 chr6-121 chr6 145893337 145893479 + 12.9 NA intron (NM_010656, intron 1 of 2) intron (NM_010656, intron 1 of 2) 2103 NM_010656 16651 Mm.49689 NM_010656 ENSMUSG00000030255 Sspn Krag sarcospan 0.007042 0.461538 -0.476197 chr3-164 chr3 96640577 96640762 + 10.7 NA Intergenic Intergenic -2692 NM_001009935 56338 Mm.475126 NM_001009935 ENSMUSG00000038393 Txnip 1200008J08Rik|AA682105|Hyplip1|THIF|Tbp-2|VDUP1 thioredoxin interacting protein 0.027027 0.521505 -0.443933 chr6-68 chr6 93115633 93115818 + 18.2 NA Intergenic Intergenic 209640 NR_015530 330385 Mm.210197 NR_015530 9530026P05Rik B430306B02 RIKEN cDNA 9530026P05 gene 0.016216 0.510753 -0.41452 chr7-84 chr7 112235874 112236059 + 17.1 NA intron (NM_020606, intron 1 of 12) intron (NM_020606, intron 1 of 12) 17080 NM_020606 57342 Mm.143763 NM_020606 ENSMUSG00000030770 Parva 2010012A22Rik|5430400F08Rik|AI225929|AU042898|Actp|CH-ILKBP|Parvin parvin, alpha 0.005405 0.505376 -0.381651 chr4-200 chr4 146362801 146362968 + 11.8 NA Intergenic Intergenic -34192 NM_001014397 433804 Mm.332047 NM_001014397 ENSMUSG00000065999 Gm13154 OTTMUSG00000010673 predicted gene 13154 0 0.464286 -0.376498 chr2-206 chr2 59154749 59154934 + 11.8 NA intron (NM_175464, intron 20 of 20) intron (NM_175464, intron 20 of 20) -130650 NM_029723 76747 Mm.275769 NM_029723 ENSMUSG00000026989 Dapl1 2310032F03Rik|EEDA death associated protein-like 1 0.005405 0.510753 -0.341517 chr4-15 chr4 136393855 136393934 + 63.2 NA Intergenic Intergenic -73123 NM_198248 230848 Mm.31068 NM_198248 ENSMUSG00000060862 Zbtb40 BC059177|C230087D24|Gm571|MGC62412|mKIAA0478 zinc finger and BTB domain containing 40 0.037975 0.5 -0.256527 chr2-116 chr2 103060133 103060318 + 17.1 NA Intergenic Intergenic 43810 NM_007914 13661 Mm.10724 NM_007914 ENSMUSG00000012350 Ehf 9030625L19Rik|AU019492 ets homologous factor 0.005405 0.387097 -0.249873 chr17-77 chr17 3034308 3034493 + 10.7 NA intron (NR_003519, intron 4 of 7) intron (NR_003519, intron 4 of 7) 6265 NR_003519 328734 Mm.335641 XM_001474127 Pisd-ps2 D030013I16Rik phosphatidylserine decarboxylase, pseudogene 2 0 0.548387 -0.234331 chr3-54 chr3 38817176 38817361 + 19.3 NA Intergenic Intergenic -140903 NM_001167883 99696 Mm.415480 NM_001033198 ENSMUSG00000078761 Ankrd50 AI662170|E430012K20Rik|KIAA1223|mKIAA1223|mKIAA3019 ankyrin repeat domain 50 0.010811 0.505376 -0.227009 chr8-153 chr8 71976714 71976899 + 11.8 NA intron (NM_153054, intron 11 of 16) intron (NM_153054, intron 11 of 16) -40918 NM_007509 11966 Mm.392573 NM_007509 ENSMUSG00000006273 Atp6v1b2 AI194269|AI790362|Atp6b2|HO57|R74844 ATPase, H+ transporting, lysosomal V1 subunit B2 0 0.430108 -0.121825 chr10-331 chr10 85047896 85048072 + 9.6 NA intron (NM_001017525, intron 2 of 14) intron (NM_001017525, intron 2 of 14) 19775 NM_001017525 74007 Mm.36544 NM_001017525 ENSMUSG00000020042 Btbd11 6330404E16Rik BTB (POZ) domain containing 11 0.005682 0.508475 -0.121825 chr6-206 chr6 58928916 58929101 + 9.6 NA intron (NM_153574, intron 2 of 17) intron (NM_153574, intron 2 of 17) 25072 NM_153574 58909 Mm.28813 NM_153574 ENSMUSG00000037709 Fam13a AI462012|D430015B01Rik|FAM13A1|Precm1 family with sequence similarity 13, member A 0 0.462366 -0.114729 chr3-117 chr3 116606621 116606806 + 12.9 NA promoter-TSS (NM_030016) promoter-TSS (NM_030016) -122 NM_030016 229780 Mm.259648 NM_030016 ENSMUSG00000033439 Ccdc76 4631408H19Rik|A330067P21|A930028L21Rik coiled-coil domain containing 76 0.010811 0.489247 -0.10951 chr17-114 chr17 35839258 35839443 + 9.6 NA Intergenic CpG 26549 NM_026308 67676 Mm.27131 NM_026308 ENSMUSG00000024446 Rpp21 0610037N01Rik ribonuclease P 21 subunit (human) 0.091892 0.698925 -0.065339 chr11-277 chr11 55053497 55053682 + 10.7 NA intron (NM_153139, intron 1 of 10) intron (NM_153139, intron 1 of 10) 5827 NM_153139 215335 Mm.35732 NM_153139 ENSMUSG00000020261 Slc36a1 5830411H19Rik|AI839897|Pat1 solute carrier family 36 (proton/amino acid symporter), member 1 0.010811 0.5 -0.010261 chr5-268 chr5 98316965 98317112 + 9.6 NA Intergenic Intergenic -45774 NM_133738 71914 Mm.24842 NM_133738 ENSMUSG00000029338 Antxr2 2310046B19Rik|AW561899|CMG-2|CMG2|cI-35 anthrax toxin receptor 2 0 0.540541 0.003656 chr10-245 chr10 82488553 82488738 + 10.7 NA intron (NM_021439, intron 1 of 2) intron (NM_021439, intron 1 of 2) 73350 NM_021439 58250 Mm.360747 NM_021439 ENSMUSG00000034612 Chst11 1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s carbohydrate sulfotransferase 11 0.016216 0.483871 0.044469 chr19-113 chr19 34778188 34778373 + 9.6 NA intron (NM_172838, intron 1 of 6) intron (NM_172838, intron 1 of 6) 34828 NM_172838 240638 Mm.74636 NM_172838 ENSMUSG00000009378 Slc16a12 3230401A21|AW210596 solute carrier family 16 (monocarboxylic acid transporters), member 12 0 0.456989 0.044469 chr2-179 chr2 59494372 59494557 + 12.9 NA intron (NM_198294, intron 2 of 26) intron (NM_198294, intron 2 of 26) 81582 NM_198294 66860 Mm.27917 NM_198294 ENSMUSG00000035168 Tanc1 1200003E16Rik|Tanc|mKIAA1728 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.005405 0.408602 0.07685 chr2-162 chr2 160836303 160836488 + 13.9 NA Intergenic Intergenic -35898 NM_173368 71389 Mm.122738 NM_173368 ENSMUSG00000057133 Chd6 5430439G14Rik|6330406J24Rik chromodomain helicase DNA binding protein 6 0.005405 0.387097 0.16216 chr5-107 chr5 64215926 64216111 + 15 NA intron (NM_145923, intron 2 of 6) intron (NM_145923, intron 2 of 6) 32014 NM_145923 100532 Mm.480645 NM_145923 ENSMUSG00000047881 Rell1 AA536743 RELT-like 1 0.027027 0.569892 0.189623 chr5-116 chr5 124493065 124493216 + 15 NA Intergenic Intergenic -16104 NM_011256 19679 Mm.44261 NM_011256 ENSMUSG00000029406 Pitpnm2 NIR3|RDGBA2|Rdgb2|mKIAA1457 phosphatidylinositol transfer protein, membrane-associated 2 0.033113 0.519737 0.189623 chr3-55 chr3 57432253 57432438 + 19.3 NA Intergenic Intergenic -42497 NM_008536 17112 Mm.856 NM_008536 ENSMUSG00000027800 Tm4sf1 L6|M3s1 transmembrane 4 superfamily member 1 0.027027 0.403226 0.255753 chr8-47 chr8 12609842 12610027 + 25.7 NA Intergenic Intergenic 36909 NM_024279 78634 Mm.116871 NM_024279 ENSMUSG00000010435 1700094C09Rik MGC58425 RIKEN cDNA 1700094C09 gene 0.016216 0.44086 0.299954 chr15-158 chr15 72660451 72660636 + 9.6 NA intron (NM_001164641, intron 17 of 17) intron (NM_001164641, intron 17 of 17) -22963 NR_002864 353342 Mm.440245 NR_002864 Peg13 - paternally expressed 13 0.027027 0.483871 0.331235 chr10-364 chr10 116961201 116961386 + 9.6 NA Intergenic L1MB4|LINE|L1 -71198 NM_027468 70574 Mm.339332 XM_917914 ENSMUSG00000020183 Cpm 1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik|MGC118152 carboxypeptidase M 0.032432 0.451613 0.343666 chr6-56 chr6 50707550 50707735 + 20.4 NA Intergenic Intergenic -123663 NM_021892 60531 Mm.157158 NM_021892 ENSMUSG00000029831 Npvf Rfrp neuropeptide VF precursor 0.010811 0.430108 0.363361 chr16-192 chr16 7366635 7366789 + 10.7 NA Intergenic Intergenic 381557 NM_183188 268859 Mm.434732 NM_021477 ENSMUSG00000008658 A2bp1 A2bp|Hrnbp1|fox-1 ataxin 2 binding protein 1 0 0.432258 0.368772 chr2-100 chr2 18834337 18834522 + 18.2 NA intron (NM_008845, intron 1 of 9) intron (NM_008845, intron 1 of 9) 81446 NM_008845 18718 Mm.313977 NM_008845 ENSMUSG00000026737 Pip4k2a AW742916|Pip5k2a phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 0.005405 0.446237 0.384342 chr16-89 chr16 93434978 93435163 + 18.2 NA Intergenic Intergenic 57285 NM_145482 224440 Mm.10628 NM_145482 ENSMUSG00000022948 Setd4 AY037804|C21orf18|ORF21 SET domain containing 4 0.021622 0.451613 0.500573 chr1-181 chr1 52628256 52628441 + 11.8 NA intron (NM_133829, intron 2 of 6) intron (NM_133829, intron 2 of 6) 43515 NM_178081 98682 Mm.269793 NM_133829 ENSMUSG00000041439 Mfsd6 2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2 major facilitator superfamily domain containing 6 0.021622 0.419355 0.528211 chr9-210 chr9 118361793 118361978 + 10.7 NA intron (NM_018748, intron 1 of 23) intron (NM_018748, intron 1 of 23) 6870 NM_018748 54214 Mm.10409 NM_018748 ENSMUSG00000038708 Golga4 AI225887|AU019508|Olp-1 golgi autoantigen, golgin subfamily a, 4 0.005405 0.424731 0.528211 chr4-32 chr4 46604562 46604747 + 39.6 NA intron (NM_001164804, intron 1 of 11) intron (NM_001164804, intron 1 of 11) -17114 NM_178893 107684 Mm.416311 NM_001164804 ENSMUSG00000028337 Coro2a AI563590|IR10 coronin, actin binding protein 2A 0.010811 0.403226 0.550291 chr2-328 chr2 144924324 144924509 + 9.6 NA Intergenic Intergenic -9635 NM_053195 94249 Mm.217171 NM_053195 ENSMUSG00000063873 Slc24a3 NCKX3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 0.010811 0.55914 0.597157 chr7-104 chr7 116888888 116889073 + 15 NA Intergenic Intergenic -283147 NM_175645 233781 Mm.461427 NM_175645 ENSMUSG00000030657 Xylt1 8030490L12 xylosyltransferase 1 0.005405 0.5 0.65226 chr5-204 chr5 49383936 49384121 + 10.7 NA Intergenic Intergenic -206223 NM_030265 80334 Mm.160172 NM_030265 ENSMUSG00000029088 Kcnip4 AV032399|Calp|Calp250|KChIP4|KChIP4a Kv channel interacting protein 4 0.016216 0.435484 0.658683 chr5-186 chr5 139117435 139117620 + 11.8 NA Intergenic Intergenic 108805 NM_030565 80752 Mm.320355 NM_030565 ENSMUSG00000025854 Fam20c C76981|DMP-4|DMP4|KIAA4081|MGC7673|mKIAA4081 family with sequence similarity 20, member C 0.016216 0.580645 0.668371