View source for CavPor3 5-way conservation alignment

==see also==

<UL>
<LI>Guinea&nbsp;pig 5-way [[CavPor3 5-way Genome size statistics]]</LI>
<LI>Guinea&nbsp;pig 5-way [[CavPor3 5-way conservation lastz parameters]]</LI>
<LI>all other [[UCSC Multiple Alignments]]</LI>
</UL>

==do not edit==

This table is automatically generated off-line from the UCSC databases.  Please do not edit it.

<TABLE BORDER=1>
<TR>
  <TH>URL&nbsp;to<BR>assembly<BR>sequence</TH>
  <TH>UCSC&nbsp;db&nbsp;name/<BR>genome-preview<BR>browser</TH>
  <TD>Scientific&nbsp;name/<BR>assembly&nbsp;information</TD>
  <TD>Common<BR>name</TD>
  <TD>assembly&nbsp;date&nbsp;(version)</TD>
  <TD>source<BR>version</TD>
  <TD>Repeat<BR>Masker</TD>
  <TD>Window<BR>Masker</TD>
  <TD>chain<BR>on&nbsp;cavPor3</TD>
  <TD>%&nbsp;of&nbsp;cavPor3<BR>matched<BR>(chainLink&nbsp;table)</TD>
</TR>
<TR>
  <TH>[http://www.ncbi.nlm.nih.gov/genome/assembly/304568/ 01]</TH><TH>[http://genome-preview.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]</TH><TD>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAKN02 Cavia<BR>porcellus]</TD><TD>Guinea&nbsp;pig</TD>
  <TD>Feb.&nbsp;2008&nbsp;(Broad/cavPor3)</TD>
  <TD>Broad Institute cavPor3</TD>
  <TD ALIGN=RIGHT>2009-08-15</TD>
  <TD ALIGN=RIGHT>2009-08-15</TD>
  <TD>N/A</TD><TD ALIGN=RIGHT>N/A</TD>
</TR><TR>
  <TH>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000696425.1/ 02]</TH><TH>[http://genome-preview.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]</TH><TD>[http://www.ncbi.nlm.nih.gov/assembly/GCF_000696425.1/ Galeopterus<BR>variegatus]</TD><TD>Malayan&nbsp;flying&nbsp;lemur</TD>
  <TD>Jun.&nbsp;2014&nbsp;(G_variegatus-3.0.2/galVar1)</TD>
  <TD>Washington University (WashU)</TD>
  <TD ALIGN=RIGHT>2016-03-02</TD>
  <TD ALIGN=RIGHT>2016-03-04</TD>
  <TD>2016-04-15</TD><TD ALIGN=RIGHT>48.820%</TD>
</TR><TR>
  <TH>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000001405.15/ 03]</TH><TH>[http://genome-preview.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]</TH><TD>[http://www.ncbi.nlm.nih.gov/projects/genome/assembly/grc/human/index.shtml Homo<BR>sapiens]</TD><TD>Human</TD>
  <TD>Dec.&nbsp;2013&nbsp;(GRCh38/hg38)</TD>
  <TD>GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.2)</TD>
  <TD ALIGN=RIGHT>2014-01-10</TD>
  <TD ALIGN=RIGHT>2013-12-25</TD>
  <TD>2015-04-29</TD><TD ALIGN=RIGHT>48.000%</TD>
</TR><TR>
  <TH>[http://www.broadinstitute.org/ftp/pub/assemblies/mammals/treeShrew/tupBel1/ 04]</TH><TH>[http://genome-preview.cse.ucsc.edu/cgi-bin/hgTracks?db=tupBel1 tupBel1]</TH><TD>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AAPY00 Tupaia<BR>belangeri]</TD><TD>Tree&nbsp;shrew</TD>
  <TD>Dec.&nbsp;2006&nbsp;(Broad/tupBel1)</TD>
  <TD>Broad Institute tupBel1 (NCBI project 13971, AAPY01000000)</TD>
  <TD ALIGN=RIGHT>2009-09-02</TD>
  <TD ALIGN=RIGHT>2012-05-03</TD>
  <TD>2016-04-15</TD><TD ALIGN=RIGHT>27.994%</TD>
</TR><TR>
  <TH>[http://www.ncbi.nlm.nih.gov/genome/assembly/327618/ 05]</TH><TH>[http://genome-preview.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]</TH><TD>[http://www.ncbi.nlm.nih.gov/bioproject/51977 Mus<BR>musculus]</TD><TD>Mouse</TD>
  <TD>Dec.&nbsp;2011&nbsp;(GRCm38/mm10)</TD>
  <TD>Genome Reference Consortium Mouse Build 38 (GCA_000001635.2)</TD>
  <TD ALIGN=RIGHT>2012-02-06</TD>
  <TD ALIGN=RIGHT>2012-02-07</TD>
  <TD>2012-03-19</TD><TD ALIGN=RIGHT>29.115%</TD>
</TR>
</TABLE>