AnoCar2 conservation alignment: Difference between revisions
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<LI>[[UCSC Multiple Alignments]] | <LI>Lizard 7-way [[AnoCar2 Genome size statistics]]</LI> | ||
<LI>Lizard 7-way [[AnoCar2 conservation lastz parameters]]</LI> | |||
<LI>all other [[UCSC Multiple Alignments]]</LI> | |||
</UL> | </UL> | ||
Latest revision as of 22:40, 18 May 2011
see also
- Lizard 7-way AnoCar2 Genome size statistics
- Lizard 7-way AnoCar2 conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| UCSC db name |
Scientific name |
Common name |
assembly date |
source version |
Repeat Masker |
Window Masker |
chain on anoCar2 |
% of anoCar2 matched (chainLink table) |
|
|---|---|---|---|---|---|---|---|---|---|
| 01 | anoCar2 | Anolis carolinensis | Lizard | May 2010 (Broad AnoCar2.0/anoCar2) | Broad Institute of MIT and Harvard AnoCar 2.0 (GCA_000090745.1) | 2011-04-12 | 2011-04-13 | N/A | N/A |
| 02 | galGal3 | Gallus gallus | Chicken | May 2006 (WUGSC 2.1/galGal3) | Chicken Genome Sequencing Consortium May 2006 release | 2009-08-15 | 2007-01-02 | 2011-04-26 | 6.822% |
| 03 | ornAna1 | Ornithorhynchus anatinus | Platypus | Mar. 2007 (WUGSC 5.0.1/ornAna1) | WUSTL version 5.0.1 | 2009-08-15 | N/A | 2011-04-27 | 4.561% |
| 04 | hg19 | Homo sapiens | Human | Feb. 2009 (GRCh37/hg19) | GRCh37 Genome Reference Consortium Human Reference 37 (GCA_000001405.1) | 2009-08-15 | N/A | 2011-04-19 | 5.190% |
| 05 | mm9 | Mus musculus | Mouse | July 2007 (NCBI37/mm9) | NCBI Build 37 | 2009-08-14 | N/A | 2011-04-26 | 4.981% |
| 06 | xenTro2 | Xenopus tropicalis | X. tropicalis | Aug. 2005 (JGI 4.1/xenTro2) | JGI v4.1 | 2009-08-16 | 2009-09-02 | 2011-04-25 | 5.053% |
| 07 | gasAcu1 | Gasterosteus aculeatus | Stickleback | Feb. 2006 (Broad/gasAcu1) | Broad Institute gasAcu1 (1.0) (NCBI project 13579, AANH01000000) | 2009-08-15 | 2009-08-15 | 2011-04-26 | 3.143% |
