Hg38 100-way Genome size statistics: Difference between revisions
From genomewiki
Jump to navigationJump to search
(updated) |
(updated) |
||
Line 404: | Line 404: | ||
<TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Capra_hircus/CHIR_1.0/ Domestic goat]</TD><TH ALIGN=CENTER>86.64X</TH> | <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Capra_hircus/CHIR_1.0/ Domestic goat]</TD><TH ALIGN=CENTER>86.64X</TH> | ||
<TH ALIGN=CENTER>92306894</TH> | <TH ALIGN=CENTER>92306894</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>41.318%</TD> | ||
<TD ALIGN=RIGHT>3000</TD> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER>medium</TD></TR> | <TD ALIGN=CENTER>medium</TD></TR> | ||
Line 521: | Line 521: | ||
<TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AABR07 Rat]</TD><TH ALIGN=CENTER>10X</TH> | <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AABR07 Rat]</TD><TH ALIGN=CENTER>10X</TH> | ||
<TH ALIGN=CENTER>145729302</TH> | <TH ALIGN=CENTER>145729302</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>24.601%</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000419365.1/ 55]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]</TH> | <TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000419365.1/ 55]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]</TH> | ||
<TH ALIGN=RIGHT>52,711</TH> | <TH ALIGN=RIGHT>52,711</TH> | ||
Line 530: | Line 530: | ||
<TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Cricetulus_griseus/C_griseus_v1.0/ Chinese hamster]</TD><TH ALIGN=CENTER>130X</TH> | <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Cricetulus_griseus/C_griseus_v1.0/ Chinese hamster]</TD><TH ALIGN=CENTER>130X</TH> | ||
<TH ALIGN=CENTER>1558295</TH> | <TH ALIGN=CENTER>1558295</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>24.331%</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349665.1/ 56]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]</TH> | <TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000349665.1/ 56]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]</TH> | ||
<TH ALIGN=RIGHT>21,484</TH> | <TH ALIGN=RIGHT>21,484</TH> | ||
Line 539: | Line 539: | ||
<TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mesocricetus_auratus/MesAur1.0/ Golden hamster]</TD><TH ALIGN=CENTER>115X</TH> | <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Mesocricetus_auratus/MesAur1.0/ Golden hamster]</TD><TH ALIGN=CENTER>115X</TH> | ||
<TH ALIGN=CENTER>12753307</TH> | <TH ALIGN=CENTER>12753307</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>21.475%</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317375.1/ 57]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]</TH> | <TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000317375.1/ 57]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]</TH> | ||
<TH ALIGN=RIGHT>6,335</TH> | <TH ALIGN=RIGHT>6,335</TH> | ||
Line 548: | Line 548: | ||
<TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Microtus_ochrogaster/MicOch1.0/ Prairie vole]</TD><TH ALIGN=CENTER>94X</TH> | <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Microtus_ochrogaster/MicOch1.0/ Prairie vole]</TD><TH ALIGN=CENTER>94X</TH> | ||
<TH ALIGN=CENTER>61813736</TH> | <TH ALIGN=CENTER>61813736</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>21.935%</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181275.2/ 58]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]</TH> | <TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000181275.2/ 58]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]</TH> | ||
<TH ALIGN=RIGHT>12,845</TH> | <TH ALIGN=RIGHT>12,845</TH> | ||
Line 557: | Line 557: | ||
<TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Sorex_araneus/SorAra2.0/ Shrew]</TD><TH ALIGN=CENTER>120X</TH> | <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/vertebrates_mammals/Sorex_araneus/SorAra2.0/ Shrew]</TD><TH ALIGN=CENTER>120X</TH> | ||
<TH ALIGN=CENTER>22794405</TH> | <TH ALIGN=CENTER>22794405</TH> | ||
<TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT> | <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>22.099%</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/233 59]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]</TH> | <TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/233 59]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]</TH> | ||
<TH ALIGN=RIGHT>277,711</TH> | <TH ALIGN=RIGHT>277,711</TH> | ||
Line 567: | Line 567: | ||
<TH ALIGN=CENTER>36602</TH> | <TH ALIGN=CENTER>36602</TH> | ||
<TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>N/A</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>3000</TD> | ||
<TD ALIGN=CENTER> | <TD ALIGN=CENTER>medium</TD></TR> | ||
<TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/mammals/opossum 60]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]</TH> | <TR><TH ALIGN=RIGHT>[http://www.broadinstitute.org/mammals/opossum 60]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]</TH> | ||
<TH ALIGN=RIGHT>11</TH> | <TH ALIGN=RIGHT>11</TH> |
Revision as of 23:10, 13 February 2015
see also
- Human 100-way Hg38 100-way conservation alignment
- Human 100-way Hg38 100-way conservation lastz parameters
- all other UCSC Multiple Alignments
statistics collected from UCSC 2bit files
- The external link in the first column goes to the FTP location where the genome sequence was obtained
- The external links from the UCSC database name go to the UCSC genome-test browser for that genome
- N bases == unknown bases in the assembly marked by "N"
- non-N bases == called bases in the assembly
- total size == all bases in assembly, N and non-N
- The % masked is masking from Repeat Masker or Window Masker plus TRF/Simple Repeats, whichever is greater, usually WindowMasker for these genomes
- The common name external links go to information pages for this genome
- The coverage numbers are taken directly from information README files from the sequencing center
- The N50 size is calculated directly from the UCSC chrom.sizes file which is the size of the chromosomes as seen in the UCSC genome browser
do not edit, automatically generated table
order count/ ftp src |
ucsc db name/ genome-test |
chrom count |
total size |
non-N bases |
N base count |
% masked | common name/ src info |
coverage | N50 chrom.sizes |
alignment type | % of hg38 matched (chainLink table) |
chain minScore |
chain linearGap |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | hg38 | 455 | 3,209,286,105 | 3,049,315,783 | 159,970,322 | % 52.10 | Human | 20X | 145138636 | N/A | N/A | 3000 | medium |
02 | panTro4 | 24,129 | 3,309,577,922 | 2,902,338,967 | 407,238,955 | % 51.29 | Chimp | 6X | 143986469 | Net | 93.112% | 5000 | medium |
03 | gorGor3 | 46,823 | 3,029,553,646 | 2,822,760,080 | 206,793,566 | % 48.80 | Gorilla | 2.1X | 145327772 | Net | 88.005% | 3000 | medium |
04 | ponAbe2 | 55 | 3,446,771,396 | 3,093,543,172 | 353,228,224 | % 50.89 | Orangutan | 6X | 135191526 | Net | 89.187% | 5000 | medium |
05 | nomLeu3 | 17,492 | 2,962,077,449 | 2,756,609,047 | 205,468,402 | % 51.14 | Gibbon | 5.6X | 117381234 | Net | 86.379% | 3000 | medium |
06 | macFas5 | 7,601 | 2,946,843,737 | 2,803,866,385 | 142,977,352 | % 50.11 | Crab-eating macaque | 68X | 152835861 | Net | 85.675% | 3000 | medium |
07 | rheMac3 | 34,103 | 2,969,988,180 | 2,639,145,830 | 330,842,350 | % 48.54 | Rhesus | 50X | 150158102 | Net | 79.729% | 5000 | medium |
08 | papAnu2 | 63,250 | 2,948,380,710 | 2,893,250,291 | 55,130,419 | % 38.95 | Baboon | 85X | 139646187 | Net | 84.179% | 3000 | medium |
09 | saiBol1 | 2,685 | 2,608,572,064 | 2,477,131,095 | 131,440,969 | % 46.69 | Squirrel monkey | 80X | 18744880 | Net | 70.565% | 3000 | medium |
10 | chlSab2 | 2,004 | 2,789,656,328 | 2,752,000,999 | 37,655,329 | % 48.77 | Green monkey | 95X | 101219884 | Net | 84.393% | 5000 | medium |
11 | calJac3 | 14,205 | 2,914,958,544 | 2,752,505,800 | 162,452,744 | % 47.71 | Marmoset | 6X | 132174527 | Net | 71.709% | 3000 | medium |
12 | oryAfe1 | 22,509 | 4,444,080,527 | 3,415,340,621 | 1,028,739,906 | % 31.09 | Aardvark | 44X | 7875832 | Net | 36.526% | 3000 | medium |
13 | otoGar3 | 7,793 | 2,519,724,550 | 2,359,530,453 | 160,194,097 | % 39.51 | Bushbaby | 137X | 13852661 | Net | 49.485% | 3000 | medium |
14 | cerSim1 | 3,087 | 2,464,367,180 | 2,366,858,012 | 97,509,168 | % 38.80 | White rhinoceros | 91X | 26277727 | Net | 53.075% | 3000 | medium |
15 | chrAsi1 | 20,500 | 4,210,110,458 | 3,363,564,316 | 846,546,142 | % 20.11 | Cape golden mole | 66X | 13470186 | Net | 29.208% | 3000 | medium |
16 | eptFus1 | 6,788 | 2,026,627,185 | 1,811,378,799 | 215,248,386 | % 24.11 | Big brown bat | 84X | 13454942 | Net | 36.386% | 3000 | medium |
17 | tupChi1 | 50,750 | 2,846,580,235 | 2,706,389,135 | 140,191,100 | % 40.02 | Chinese tree shrew | 80X | 3670124 | Net | 37.022% | 3000 | medium |
18 | equCab2 | 34 | 2,484,532,062 | 2,428,790,173 | 55,741,889 | % 40.97 | Horse | 6.8X | 91571448 | Net | 52.083% | 3000 | medium |
19 | camFer1 | 13,334 | 2,009,194,609 | 1,985,416,433 | 23,778,176 | % 33.32 | Bactrian camel | 30X | 2005940 | Net | 46.206% | 3000 | medium |
20 | vicPac2 | 276,611 | 2,172,177,994 | 2,078,582,856 | 93,595,138 | % 35.40 | Alpaca | 22X | 7263804 | Net | 45.887% | 3000 | medium |
21 | turTru2 | 240,901 | 2,551,996,573 | 2,332,402,443 | 219,594,130 | % 43.56 | Dolphin | 3.5X | 116261 | Net | 46.072% | 3000 | medium |
22 | canFam3 | 3,268 | 2,410,976,875 | 2,392,715,236 | 18,261,639 | % 43.01 | Dog | 7.6X | 63241923 | Net | 49.978% | 3000 | medium |
23 | orcOrc1 | 1,668 | 2,372,919,877 | 2,249,582,112 | 123,337,765 | % 42.47 | Killer whale | 200X | 12735091 | Net | 47.281% | 3000 | medium |
24 | speTri2 | 12,483 | 2,478,393,770 | 2,311,060,300 | 167,333,470 | % 36.27 | Squirrel | 495X | 8192786 | Net | 44.729% | 3000 | medium |
25 | pteAle1 | 65,597 | 1,985,958,707 | 1,944,625,202 | 41,333,505 | % 32.56 | Black flying-fox | 110X | 15954802 | Net | 45.612% | 3000 | medium |
26 | susScr3 | 4,583 | 2,808,525,991 | 2,518,987,191 | 289,538,800 | % 44.30 | Pig | 24X | 148491826 | Net | 41.326% | 3000 | medium |
27 | loxAfr3 | 2,353 | 3,196,760,833 | 3,118,565,340 | 78,195,493 | % 47.63 | Elephant | 7X | 46401353 | Net | 41.904% | 3000 | medium |
28 | hetGla2 | 4,229 | 2,618,204,639 | 2,314,771,103 | 303,433,536 | % 32.31 | Naked mole-rat | 90X | 20532749 | Net | 42.315% | 3000 | medium |
29 | pteVam1 | 96,944 | 1,996,076,410 | 1,839,436,660 | 156,639,750 | % 31.75 | Megabat | 2X | 124060 | Net | 41.012% | 3000 | medium |
30 | felCat8 | 267,625 | 2,641,342,258 | 2,599,700,169 | 41,642,089 | % 44.41 | Cat | 20X | 142431058 | Net | 47.700% | 3000 | medium |
31 | ailMel1 | 81,467 | 2,299,509,015 | 2,245,312,831 | 54,196,184 | % 38.96 | Panda | 73X | 1281781 | Net | 48.226% | 3000 | medium |
32 | musFur1 | 7,741 | 2,410,758,013 | 2,277,906,570 | 132,851,443 | % 38.98 | Ferret | 162X | 9335154 | Net | 45.782% | 3000 | medium |
33 | cavPor3 | 3,144 | 2,723,219,641 | 2,663,369,733 | 59,849,908 | % 27.53 | Guinea pig | 6.76X | 27942054 | Net | 37.901% | 3000 | medium |
34 | dasNov3 | 46,559 | 3,631,522,711 | 3,299,882,028 | 331,640,683 | % 49.28 | Armadillo | 6X | 1687935 | Net | 42.233% | 3000 | medium |
35 | oryCun2 | 3,242 | 2,737,490,501 | 2,604,023,284 | 133,467,217 | % 43.74 | Rabbit | 6.51X | 111795807 | Net | 38.631% | 3000 | medium |
36 | panHod1 | 15,059 | 2,696,886,330 | 2,507,986,438 | 188,899,892 | % 42.51 | Tibetan antelope | 67X | 2772860 | Net | 41.357% | 3000 | medium |
37 | lepWed1 | 16,711 | 3,156,902,762 | 2,223,164,129 | 933,738,633 | % 40.09 | Weddell seal | 82X | 904031 | Net | 47.437% | 3000 | medium |
38 | odoRosDiv1 | 3,892 | 2,400,133,628 | 2,300,235,509 | 99,898,119 | % 40.52 | Pacific walrus | 200X | 2616778 | Net | 47.985% | 3000 | medium |
39 | myoDav1 | 101,769 | 2,059,799,708 | 1,878,461,987 | 181,337,721 | % 23.35 | David's myotis (bat) | 110X | 3454484 | Net | 34.892% | 3000 | medium |
40 | bosTau8 | 3,179 | 2,670,044,500 | 2,649,304,231 | 20,740,269 | % 48.69 | Cow | 9X | 105708250 | Net | 45.975% | 3000 | medium |
41 | capHir1 | 77,021 | 2,635,848,900 | 2,495,939,845 | 139,909,055 | % 43.55 | Domestic goat | 86.64X | 92306894 | Net | 41.318% | 3000 | medium |
42 | oviAri3 | 5,698 | 2,619,054,388 | 2,534,335,866 | 84,718,522 | % 45.18 | Sheep | 142X | 100079507 | Net | 41.193% | 3000 | medium |
43 | myoLuc2 | 11,654 | 2,034,575,300 | 1,966,419,868 | 68,155,432 | % 33.71 | Microbat | 2.18X | 4293315 | Net | 35.148% | 3000 | medium |
44 | eleEdw1 | 8,768 | 3,843,982,861 | 3,315,871,847 | 528,111,014 | % 49.11 | Cape elephant shrew | 62X | 15011382 | Net | 22.161% | 3000 | medium |
45 | triMan1 | 6,323 | 3,103,808,406 | 2,769,099,677 | 334,708,729 | % 36.24 | Manatee | 150X | 14442683 | Net | 41.443% | 3000 | medium |
46 | jacJac1 | 10,896 | 2,835,242,767 | 2,470,259,869 | 364,982,898 | % 37.29 | Lesser Egyptian jerboa | 78X | 22080993 | Net | 27.899% | 3000 | medium |
47 | chiLan1 | 2,838 | 2,390,852,391 | 2,284,276,400 | 106,575,991 | % 30.82 | Chinchilla | 87X | 21893125 | Net | 40.808% | 3000 | medium |
48 | conCri1 | 2,038 | 1,769,657,897 | 1,682,542,007 | 87,115,890 | % 18.21 | Star-nosed mole | 113.1X | 55520359 | Net | 33.037% | 3000 | medium |
49 | octDeg1 | 7,134 | 2,995,882,938 | 2,526,254,692 | 469,628,246 | % 26.47 | Brush-tailed rat | 80X | 12091372 | Net | 35.827% | 3000 | medium |
50 | ochPri3 | 10,420 | 2,229,835,716 | 1,943,987,870 | 285,847,846 | % 29.53 | Pika | 103X | 26863993 | Net | 30.261% | 3000 | medium |
51 | eriEur2 | 5,803 | 2,715,720,925 | 2,333,073,535 | 382,647,390 | % 45.60 | Hedgehog | 79X | 3264618 | Net | 21.643% | 3000 | medium |
52 | echTel2 | 8,402 | 2,947,024,286 | 2,605,196,361 | 341,827,925 | % 28.26 | Tenrec | 78X | 45764842 | Net | 27.550% | 3000 | medium |
53 | mm10 | 66 | 2,730,871,774 | 2,652,783,500 | 78,088,274 | % 45.18 | Mouse | 20X | 130694993 | Net | 31.629% | 3000 | medium |
54 | rn6 | 953 | 2,870,182,909 | 2,729,860,805 | 140,322,104 | % 43.31 | Rat | 10X | 145729302 | Net | 24.601% | 3000 | medium |
55 | criGri1 | 52,711 | 2,360,146,428 | 2,301,325,917 | 58,820,511 | % 27.06 | Chinese hamster | 130X | 1558295 | Net | 24.331% | 3000 | medium |
56 | mesAur1 | 21,484 | 2,504,925,039 | 2,076,176,254 | 428,748,785 | % 25.70 | Golden hamster | 115X | 12753307 | Net | 21.475% | 3000 | medium |
57 | micOch1 | 6,335 | 2,287,340,943 | 2,104,321,675 | 183,019,268 | % 23.89 | Prairie vole | 94X | 61813736 | Net | 21.935% | 3000 | medium |
58 | sorAra2 | 12,845 | 2,423,158,183 | 2,192,103,426 | 231,054,757 | % 32.76 | Shrew | 120X | 22794405 | Net | 22.099% | 3000 | medium |
59 | macEug2 | 277,711 | 3,075,184,024 | 2,536,076,954 | 539,107,070 | % 47.39 | Wallaby | 2X | 36602 | Net | N/A | 3000 | medium |
60 | monDom5 | 11 | 3,605,631,728 | 3,501,660,299 | 103,971,429 | % 55.95 | Opossum | 6.8X | 527952102 | Net | 14.370% | 5000 | loose |
61 | sarHar1 | 35,974 | 3,174,693,010 | 2,931,539,702 | 243,153,308 | % 39.66 | Tasmanian devil | 85X | 1847106 | Net | N/A | 1000 | N/A |
62 | apaSpi1 | 286,620 | 1,931,078,847 | 1,877,982,184 | 53,096,663 | % 29.87 | Spiny softshell turtle | 33.4X | 2306994 | Net | N/A | 1000 | N/A |
63 | cheMyd1 | 140,023 | 2,208,410,377 | 2,110,381,997 | 98,028,380 | % 29.65 | Green seaturtle | 110X | 3864108 | Net | 6.296% | 5000 | loose |
64 | chrPic2 | 78,595 | 2,365,766,562 | 2,173,204,089 | 192,562,473 | % 31.52 | Painted turtle | 15X | 7072151 | Net | 6.708% | 5000 | loose |
65 | pelSin1 | 19,904 | 2,202,483,752 | 2,106,639,384 | 95,844,368 | % 33.82 | Chinese softshell turtle | 105X | 3350749 | Net | N/A | 1000 | N/A |
66 | ornAna1 | 201,523 | 1,996,811,212 | 1,842,235,522 | 154,575,690 | % 47.89 | Platypus | 6X | 991605 | Net | N/A | 1000 | N/A |
67 | allMis1 | 14,645 | 2,174,259,888 | 2,128,720,123 | 45,539,765 | % 37.18 | American alligator | 68X | 508966 | Net | N/A | 1000 | N/A |
68 | colLiv1 | 14,923 | 1,107,989,085 | 1,086,925,875 | 21,063,210 | % 19.83 | Rock pigeon | 60X | 3148738 | Net | N/A | 1000 | N/A |
69 | galGal4 | 15,932 | 1,046,932,099 | 1,032,854,810 | 14,077,289 | % 20.41 | Chicken | 12X | 90216835 | Net | N/A | 1000 | N/A |
70 | anoCar2 | 6,457 | 1,799,143,587 | 1,701,353,767 | 97,789,820 | % 41.98 | Lizard | 7.1X | 150641573 | Net | 3.593% | 5000 | loose |
71 | anaPla1 | 78,488 | 1,105,052,351 | 1,069,972,754 | 35,079,597 | % 20.21 | Mallard duck | 60X | 1233631 | Net | N/A | 1000 | N/A |
72 | melGal1 | 5,891 | 1,061,817,101 | 935,922,386 | 125,894,715 | % 6.60 | Turkey | 5X | 74864452 | Net | N/A | 1000 | N/A |
73 | falChe1 | 5,863 | 1,174,811,715 | 1,150,993,769 | 23,817,946 | % 18.62 | Saker falcon | 147X | 4154532 | Net | N/A | 1000 | N/A |
74 | falPer1 | 7,021 | 1,171,973,431 | 1,153,404,348 | 18,569,083 | % 18.69 | Peregrine falcon | 137.6X | 3935757 | Net | N/A | 1000 | N/A |
75 | amaVit1 | 182,974 | 1,175,404,042 | 1,128,255,752 | 47,148,290 | % 18.36 | Parrot | 24X | 19239 | Net | N/A | 1000 | N/A |
76 | araMac1 | 192,790 | 1,204,700,227 | 997,522,769 | 207,177,458 | % 16.49 | Scarlet Macaw | 26X | 15974 | Net | N/A | 1000 | N/A |
77 | pseHum1 | 5,406 | 1,042,997,632 | 1,030,030,436 | 12,967,196 | % 20.21 | Tibetan ground jay | 96.25X | 16337386 | Net | N/A | 1000 | N/A |
78 | melUnd1 | 25,212 | 1,117,373,619 | 1,086,614,815 | 30,758,804 | % 19.62 | Budgerigar | 7X | 10614383 | Net | N/A | 1000 | N/A |
79 | ficAlb2 | 21,428 | 1,118,343,587 | 1,102,323,882 | 16,019,705 | % 24.04 | Collared flycatcher | 60X | 64724594 | Net | N/A | 1000 | N/A |
80 | zonAlb1 | 6,018 | 1,052,600,561 | 1,006,293,510 | 46,307,051 | % 20.03 | White-throated sparrow | 63X | 4866725 | Net | N/A | 1000 | N/A |
81 | geoFor1 | 27,239 | 1,065,292,181 | 1,041,286,029 | 24,006,152 | % 19.99 | Medium ground finch | 115X | 5255844 | Net | N/A | 1000 | N/A |
82 | taeGut2 | 37,096 | 1,232,135,591 | 1,222,864,691 | 9,270,900 | % 8.11 | Zebra finch | 5.5X | 62374962 | Net | N/A | 1000 | N/A |
83 | lepOcu1 | 1,925 | 945,874,548 | 869,414,359 | 76,460,189 | % 24.85 | Spotted gar | 677.5X | 50348508 | Net | N/A | 1000 | N/A |
84 | xenTro7 | 7,728 | 1,437,530,879 | 1,365,936,747 | 71,594,132 | % 33.98 | X. tropicalis | 7.44X | 124127367 | Net | N/A | 1000 | N/A |
85 | latCha1 | 22,819 | 2,860,591,921 | 2,183,592,768 | 676,999,153 | % 45.68 | Coelacanth | 77.5X | 924513 | Net | N/A | 1000 | N/A |
86 | gadMor1 | 427,428 | 824,327,835 | 608,038,555 | 216,289,280 | % 31.25 | Atlantic cod | 40X | 393166 | Net | N/A | 1000 | N/A |
87 | gasAcu1 | 23 | 463,354,448 | 446,627,861 | 16,726,587 | % 2.58 | Stickleback | 6X | 20083130 | Net | N/A | 1000 | N/A |
88 | oreNil2 | 5,678 | 927,696,114 | 816,084,674 | 111,611,440 | % 25.51 | Nile tilapia | 269X | 27159252 | Net | N/A | 1000 | N/A |
89 | tetNig2 | 27 | 358,618,246 | 302,314,788 | 56,303,458 | % 20.27 | Tetraodon | 7.9X | 13390619 | Net | N/A | 1000 | N/A |
90 | neoBri1 | 9,083 | 847,883,811 | 685,897,279 | 161,986,532 | % 24.12 | Princess of Burundi | 171X | 4430025 | Net | N/A | 1000 | N/A |
91 | takFla1 | 34,223 | 377,992,166 | 314,409,984 | 63,582,182 | % 17.77 | Yellowbelly pufferfish | 131X | 315240 | Net | N/A | 1000 | N/A |
92 | hapBur1 | 7,994 | 831,398,301 | 698,936,397 | 132,461,904 | % 24.10 | Burton's mouthbreeder | 131X | 1194190 | Net | N/A | 1000 | N/A |
93 | fr3 | 6,835 | 391,484,715 | 350,961,831 | 40,522,884 | % 19.01 | Fugu | 8.5X | 11516971 | Net | N/A | 1000 | N/A |
94 | astMex1 | 10,736 | 1,191,259,254 | 964,251,514 | 227,007,740 | % 39.11 | Mexican tetra (cavefish) | 70X | 1775308 | Net | N/A | 1000 | N/A |
95 | petMar2 | 25,006 | 885,550,958 | 647,368,134 | 238,182,824 | % 42.47 | Lamprey | 5.0X | 184619 | Net | 1.265% | 5000 | loose |
96 | danRer10 | 1,061 | 1,371,719,383 | 1,369,631,918 | 2,087,465 | % 52.32 | Zebrafish | 30X | 53345113 | Net | 3.357% | 5000 | loose |
97 | mayZeb1 | 3,725 | 849,595,388 | 713,527,863 | 136,067,525 | % 25.04 | Zebra Mbuna | 129.7X | 3702874 | Net | 1.805% | 5000 | loose |
98 | punNye1 | 7,233 | 830,129,318 | 698,757,151 | 131,372,167 | % 24.56 | Pundamilia nyererei | 126X | 2525540 | Net | 1.787% | 5000 | loose |
99 | oryLat2 | 7,189 | 869,000,216 | 700,386,597 | 168,613,619 | % 33.09 | Medaka | 10.6X | 29908082 | Net | 2.002% | 5000 | loose |
100 | xipMac1 | 20,632 | 729,664,433 | 652,811,251 | 76,853,182 | % 26.62 | Southern platyfish | 19.6X | 1303070 | Net | 1.898% | 5000 | loose |