RefSeq fish browser status: Difference between revisions

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* [[RefSeq fish browser status]]
* [[RefSeq fish browser status]]
* [[RefSeq aves browser status]]
* [[RefSeq aves browser status]]
* [[RefSeq assemblies clade survey]]
== table ==
== table ==
{| border='1' style='border-collapse:collapse' class='wikitable sortable'
{| border='1' style='border-collapse:collapse' class='wikitable sortable'
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| salSal1 TBD
| salSal1 TBD
| salSal1 TBD
| salSal1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Salmo_salar.jpg Salmo_salar.jpg]
|-
|-
! 4
! 4
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| Zebra mbuna
| Zebra mbuna
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1(1)]
| mayZeb1 TBD
| [http://genome.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1(1)]
| n/a
| [http://genome-test.cse.ucsc.edu/images/Maylandia_zebra.jpg Maylandia_zebra.jpg]
|-
|-
! 5
! 5
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| Haplochromis nyererei
| Haplochromis nyererei
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1(1)]
| punNye1 TBD
| [http://genome.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1(1)]
| n/a
| [http://genome-test.cse.ucsc.edu/images/Pundamilia_nyererei.jpg Pundamilia_nyererei.jpg]
|-
|-
! 6
! 6
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| Princess of Burundi
| Princess of Burundi
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1(1)]
| neoBri1 TBD
| [http://genome.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1(1)]
| n/a
| [http://genome-test.cse.ucsc.edu/images/Neolamprologus_brichardi.jpg Neolamprologus_brichardi.jpg]
|-
|-
! 7
! 7
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| Chromis burtoni
| Chromis burtoni
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1(1)]
| hapBur1 TBD
| [http://genome.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1(1)]
| n/a
| [http://genome-test.cse.ucsc.edu/images/Haplochromis_burtoni.jpg Haplochromis_burtoni.jpg]
|-
|-
! 8
! 8
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| Mexican tetra
| Mexican tetra
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1(1)]
| astMex1 TBD
| [http://genome.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1(1)]
| n/a
| [http://genome-test.cse.ucsc.edu/images/Astyanax_mexicanus.jpg Astyanax_mexicanus.jpg]
|-
|-
! 11
! 11
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| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1(1)]
| stePar1 TBD
| stePar1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Stegastes_partitus.jpg Stegastes_partitus.jpg]
|-
|-
! 15
! 15
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| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1(1)]
| esoLuc1 TBD
| esoLuc1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Esox_lucius.jpg Esox_lucius.jpg]
|-
|-
! 16
! 16
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| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1(1)]
| cypVar1 TBD
| cypVar1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Cyprinodon_variegatus.jpg Cyprinodon_variegatus.jpg]
|-
|-
! 17
! 17
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| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1(1)]
| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1(1)]
| notCor1 TBD
| notCor1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Notothenia_coriiceps.jpg Notothenia_coriiceps.jpg]
|-
|-
! 18
! 18
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| funHet1 TBD
| funHet1 TBD
| funHet1 TBD
| funHet1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Fundulus_heteroclitus.jpg Fundulus_heteroclitus.jpg]
|-
|-
! 19
! 19
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| cypCar1 TBD
| cypCar1 TBD
| cypCar1 TBD
| cypCar1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Cyprinus_carpio.jpg Cyprinus_carpio.jpg]
|-
|-
! 20
! 20
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| cluHar1 TBD
| cluHar1 TBD
| cluHar1 TBD
| cluHar1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Clupea_harengus.jpg Clupea_harengus.jpg]
|-
|-
! 21
! 21
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| poeLat1 TBD
| poeLat1 TBD
| poeLat1 TBD
| poeLat1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Poecilia_latipinna.jpg Poecilia_latipinna.jpg]
|-
|-
! 24
! 24
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| poeMex1 TBD
| poeMex1 TBD
| poeMex1 TBD
| poeMex1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Poecilia_mexicana.jpg Poecilia_mexicana.jpg]
|-
|-
! 25
! 25
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| notFur1 TBD
| notFur1 TBD
| notFur1 TBD
| notFur1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Nothobranchius_furzeri.jpg Nothobranchius_furzeri.jpg]
|-
|-
! 26
! 26
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| sclFor1 TBD
| sclFor1 TBD
| sclFor1 TBD
| sclFor1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Scleropages_formosus.jpg Scleropages_formosus.jpg]
|-
|-
! 30
! 30
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| latCal1 TBD
| latCal1 TBD
| latCal1 TBD
| latCal1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Lates_calcarifer.jpg Lates_calcarifer.jpg]
|-
|-
! 31
! 31
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| kryMar1 TBD
| kryMar1 TBD
| kryMar1 TBD
| kryMar1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Kryptolebias_marmoratus.jpg Kryptolebias_marmoratus.jpg]
|-
|-
! 32
! 32
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| ictPun1 TBD
| ictPun1 TBD
| ictPun1 TBD
| ictPun1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Ictalurus_punctatus.jpg Ictalurus_punctatus.jpg]
|-
|-
! 33
! 33
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| pygNat1 TBD
| pygNat1 TBD
| pygNat1 TBD
| pygNat1 TBD
| n/a
| [http://genome-test.cse.ucsc.edu/images/Pygocentrus_nattereri.jpg Pygocentrus_nattereri.jpg]
|-
|-
! 34
! 34

Latest revision as of 00:12, 23 February 2017

see also

table

RefSeq fish assemblies
count taxId scientific name common name hgwdev latest

assembly(count)

RR latest

assembly(count)

photo file
1 7955 Danio rerio Zebrafish danRer10(8) danRer10(8) Danio_rerio.jpg
2 31033 Takifugu rubripes Fugu fr3(3) fr3(3) Takifugu_rubripes.jpg
3 8030 Salmo salar Atlantic salmon salSal1 TBD salSal1 TBD Salmo_salar.jpg
4 106582 Maylandia zebra Zebra mbuna mayZeb1(1) mayZeb1(1) Maylandia_zebra.jpg
5 303518 Pundamilia nyererei Haplochromis nyererei punNye1(1) punNye1(1) Pundamilia_nyererei.jpg
6 32507 Neolamprologus brichardi Princess of Burundi neoBri1(1) neoBri1(1) Neolamprologus_brichardi.jpg
7 8153 Haplochromis burtoni Chromis burtoni hapBur1(1) hapBur1(1) Haplochromis_burtoni.jpg
8 8083 Xiphophorus maculatus Southern platyfish xipMac1(1) xipMac1(1) Xiphophorus_maculatus.jpg
9 8090 Oryzias latipes Medaka oryLat2(2) oryLat2(2) Oryzias_latipes.jpg
10 7994 Astyanax mexicanus Mexican tetra astMex1(1) astMex1(1) Astyanax_mexicanus.jpg
11 48698 Poecilia formosa Amazon molly poeFor1(1) poeFor1 TBD n/a
12 244447 Cynoglossus semilaevis Tongue sole cynSem1(1) cynSem1 TBD n/a
13 8081 Poecilia reticulata Guppy poeRet1(1) poeRet1 TBD Poecilia_reticulata.jpg
14 144197 Stegastes partitus Bicolor damselfish stePar1(1) stePar1 TBD Stegastes_partitus.jpg
15 8010 Esox lucius Northern pike esoLuc1(1) esoLuc1 TBD Esox_lucius.jpg
16 28743 Cyprinodon variegatus Sheepshead minnow cypVar1(1) cypVar1 TBD Cyprinodon_variegatus.jpg
17 8208 Notothenia coriiceps Black rockcod notCor1(1) notCor1 TBD Notothenia_coriiceps.jpg
18 8078 Fundulus heteroclitus Mummichog funHet1 TBD funHet1 TBD Fundulus_heteroclitus.jpg
19 7962 Cyprinus carpio Koi cypCar1 TBD cypCar1 TBD Cyprinus_carpio.jpg
20 7950 Clupea harengus Atlantic herring cluHar1 TBD cluHar1 TBD Clupea_harengus.jpg
21 215358 Larimichthys crocea Sciaena crocea larCro1 TBD larCro1 TBD n/a
22 52670 Austrofundulus limnaeus Annual killifish ausLim1 TBD ausLim1 TBD n/a
23 48699 Poecilia latipinna Sailfin molly poeLat1 TBD poeLat1 TBD Poecilia_latipinna.jpg
24 48701 Poecilia mexicana Shortfin molly poeMex1 TBD poeMex1 TBD Poecilia_mexicana.jpg
25 105023 Nothobranchius furzeri Turquoise killifish notFur1 TBD notFur1 TBD Nothobranchius_furzeri.jpg
26 1608454 Sinocyclocheilus anshuiensis Eyeless golden line barbel sinAns1 TBD sinAns1 TBD n/a
27 307959 Sinocyclocheilus rhinocerous Horned golden line barbel sinRhi1 TBD sinRhi1 TBD n/a
28 75366 Sinocyclocheilus grahami Golden line barbel sinGra1 TBD sinGra1 TBD n/a
29 113540 Scleropages formosus Asian arowana sclFor1 TBD sclFor1 TBD Scleropages_formosus.jpg
30 8187 Lates calcarifer Barramundi latCal1 TBD latCal1 TBD Lates_calcarifer.jpg
31 37003 Kryptolebias marmoratus Mangrove rivulus kryMar1 TBD kryMar1 TBD Kryptolebias_marmoratus.jpg
32 7998 Ictalurus punctatus Channel catfish ictPun1 TBD ictPun1 TBD Ictalurus_punctatus.jpg
33 42514 Pygocentrus nattereri Red piranha pygNat1 TBD pygNat1 TBD Pygocentrus_nattereri.jpg
34 8128 Oreochromis niloticus Nile tilapia oreNil2(2) oreNil2(2) Oreochromis_niloticus.gif
35 109280 Hippocampus comes Tiger tail seahorse hipCom1 TBD hipCom1 TBD n/a
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