TandemDups: Difference between revisions

Revision as of 16:53, 24 May 2017

methods

These are measurements of identical paired sequences with a separation between the pairs of at least one nucleotide. The smallest size sequence in this survey is 30 bases, the largest separation considered was 20,000 bases.

The procedure to find these sequences is as follows:

generate 29 base kmers for the entire genome, allow only kmers with bases: A C T G, no N's allowed.
pair up identical kmers with at least one base separation and up to 20,000 bases separation. This separation sequence is referred to here as the gap in this document.
collapse overlapping kmer pairs when they are the same size of sequence and the same spacing between the pairs. This procedure preserves the definition of duplicated identical pairs.
the resulting pairs can now be longer sequences with smaller separation then the constituent pairs
final result selects sizes of 30 bases or more for the size of the paired sequence, and at least one base remaining as a separation gap.
collapsed pairs that close the gap are discarded. They appear to indicate simple repeat sequences when this happens. It would be interesting to have this result available, but that is not available at this time.

The reason for starting with 29 base sized pairs and then selecting results of at least 30 base sized pairs results in a reasonable number of 30 base pairs. If the procedure starts with 30 base sized pairs, it produces way too many 30 base kmer pairs for a reasonable count.

The measurements are taken from the resulting db.tandemDups.bed[.gz] file in /hive/data/genomes/<db>/bed/tandemDups/db.tandemDups.bed[.gz] The score column in the bed file (column 5) is the size of the duplicated sequence. The gap size between the duplicated sequence is thus calculated from: end - start + 2 * score

This data is also available in the tandemDups table for sequences with genome browser databases. Not all sequences measured here have genome browser databases.

The item total is the sum of the sizes of the duplicated sequences. Not both sides though, just one side. This indicates how much sequence is duplicated. Multiply this by 2 to see total amount of sequence involved in these repeats for both sides.

The gap total is the sum of the sizes of all the separation gaps between the paired sequences.

table features

The table columns can be sorted, click on the up/down arrow icon in the column header. The 'year' is what we have in the dbDb table as indicated from the assembly information files for the date of the assembly. A few have estimaged dates, and do not have database genome browsers. The example item is a worst case example, where the ratio of dup sequence size to gap size is the highest, i.e. smallest gap with largest dup size

tandemDups table statistics

count	year	dbName	ncbiAsmId	assembly method	item count	item median	item total	gap median	gap total	example item dup size, gap size, link	scatter plot dup size vs. gap size
001	2016	WSB_EiJ	GCA_001624835.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	368254	34	19384243	3183	2181662749	1289, 1, chr9:85913016-85915594	plot GCA_001624835.1_WSB_EiJ_v1
002	2016	A_J	GCA_001624215.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	487934	35	30403572	2466	2702508741	2797, 1, chr4:1443666-1449260	plot GCA_001624215.1_A_J_v1
003	2016	CBA_J	GCA_001624475.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	418702	34	28401436	2843	2349801727	1304, 1, chr8:114635987-114638595	plot GCA_001624475.1_CBA_J_v1
004	2016	CAROLI_EIJ	GCA_900094665.1	tbd	376393	34	16467240	4829	2504132478	2121, 1, chr9:47637845-47642087	plot GCA_900094665.1_CAROLI_EIJ_v1
005	2016	LP_J	GCA_001632615.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	405473	34	23153810	2996	2347243646	1231, 1, chr19:15003741-15006203	plot GCA_001632615.1_LP_J_v1
006	2016	BALB_cJ	GCA_001632525.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	453227	34	28546282	3208	2659711418	1726, 1, chr6:125567161-125570613	plot GCA_001632525.1_BALB_cJ_v1
007	2016	PAHARI_EIJ	GCA_900095145.1	tbd	432765	33	17591114	4877	2885483004	2085, 1, chr7:37074720-37078890	plot GCA_900095145.1_PAHARI_EIJ_v1
008	2016	PWK_PhJ	GCA_001624775.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	681079	39	33225754	79	2397586985	3001, 11, chr8:18196572-18202584	plot GCA_001624775.1_PWK_PhJ_v1
009	2016	DBA_2J	GCA_001624505.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	420635	34	22366504	3216	2474195721	1603, 1, chr1:13810865-13814071	plot GCA_001624505.1_DBA_2J_v1
010	2016	NOD_ShiLtJ	GCA_001624675.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	452044	35	35759787	2233	2393806733	1628, 1, chr10:134464243-134467499	plot GCA_001624675.1_NOD_ShiLtJ_v1
011	2016	SPRET_EiJ	GCA_001624865.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail genomics v. August-2015; Ragout v. 2.0b	457522	34	33139291	2707	2586459484	2050, 1, chr14:83734846-83738946	plot GCA_001624865.1_SPRET_EiJ_v1
012	2016	NZO_HlLtJ	GCA_001624745.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	440820	34	30993099	2613	2478598988	1425, 1, chr7:122719474-122722324	plot GCA_001624745.1_NZO_HlLtJ_v1
013	2016	129S1_SvImJ	GCA_001624185.1	SGA v. 0.9.19; Ragout v. 2.0b	431052	34	29126986	2588	2417275715	1561, 1, chr3:107700485-107703607	plot GCA_001624185.1_129S1_SvImJ_v1
014	2016	C57BL_6NJ	GCA_001632555.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	429023	34	25052791	2909	2447640962	1140, 1, chr7:119230972-119233252	plot GCA_001632555.1_C57BL_6NJ_v1
015	2016	AKR_J	GCA_001624295.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	469624	34	33083195	2937	2697579047	1679, 1, chr16:88409132-88412490	plot GCA_001624295.1_AKR_J_v1
016	2016	CAST_EiJ	GCA_001624445.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail Genomics v. August-2015; Ragout v. 2.0b	396098	34	22798803	2992	2313231531	1283, 1, chr8:89538522-89541088	plot GCA_001624445.1_CAST_EiJ_v1
017	2016	C3H_HeJ	GCA_001632575.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	427662	34	25752170	2957	2474866264	1490, 1, chr3:96904048-96907028	plot GCA_001632575.1_C3H_HeJ_v1
018	2016	FVB_NJ	GCA_001624535.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	426149	34	26653238	2773	2415686429	1819, 1, chr1:75517924-75521562	plot GCA_001624535.1_FVB_NJ_v1
019	2013	CHM1	GCF_000306695.2	SRPRISM v. 2.4.28-alpha; ARGO v. 0.1	987820	33	36885557	7363	7996145625	225, 1, chr13:80499180-80499630	plot CHM1
020	2014	acaChl1	GCF_000695815.1	SOAPdenovo v. 1.6	69222	38	3687159	479	270396956	448, 1, KK830956:17007-17903	plot acaChl1
021	2014	aciBauTYTH_1	GCF_000302575.1	tbd	175	43	11650	1165	777735	35, 1, chr_CP003856:2714351-2714421	plot aciBauTYTH_1
022	2006	afrOth13	tbd	tbd	63170	39	3109998	1833	319093167	126, 1, 3-3:1498405-1498657	plot afrOth13
023	2009	ailMel1	GCF_000004335.2	tbd	252804	36	12081062	7914	2120476903	1357, 2, GL194066.1:206322-209037	plot ailMel1
024	2012	allMis1	GCF_000281125.1	Allpaths v. R41313; manual scaffolding	77832	39	8850601	2629	379690780	2771, 1, JH736852:249449-254991	plot allMis1
025	2013	allSin1	GCF_000455745.1	SOAPdenovo v. 1.05	116160	39	11500145	3510	624671088	5451, 1, KE696051:101233-112135	plot allSin1
026	2013	amaVit1	GCA_000332375.1	Ray software v. 3	37254	46	10717950	256	63766115	5218, 14, KB272082:90533-100982	plot amaVit1
027	2013	anaPla1	GCF_000355885.1	SOAPdenovo Release v. 1.03	27792	43	2580234	401	91882502	1258, 1, KB745735:2510-5026	plot anaPla1
028	2015	ancCey1	GCA_000688135.1	Velvet v. 1.2.05; BGI GapCloser v. 1.12 (release_2011); HaploMerger v. 20111230; ERANGE v. 3.2	55040	40	3358224	389.5	157542766	4183, 1, JARK01001394v1:846761-855127	plot ancCey1
029	2014	angJap1	GCA_000470695.1	CLC NGS Cell v. 3.2; CLC NGS Cell v. 4.0beta	546983	44	32365612	800	580570188	1181, 1, KI307522:56201-58563	plot angJap1
030	2007	anoCar1	tbd	tbd	751544	38	40990303	2923	4158391303	351, 1, scaffold_31:2142294-2142996	plot anoCar1
031	2011	anoCar2	GCF_000090745.1	Arachne v. 3.0.0	674365	37	36071400	3201	3874056176	392, 1, chr4:7395659-7396443	plot anoCar2
032	2004	anoGam1	tbd	tbd	75957	43	5353295	2383	356254048	1175, 1, chrX:14717656-14720006	plot anoGam1
033	2013	apaSpi1	GCA_000385615.1	SOAPdenovo v. 1.0.5	78831	41	3668114	120	236011041	453, 2, KB928133:814324-815231	plot apaSpi1
034	2014	apaVit1	GCF_000703405.1	SOAPdenovo v. 1.6	24291	35	1216678	112	56084043	453, 1, KL385068:59340-60246	plot apaVit1
035	2004	apiMel1	tbd	tbd	83149	38	3897116	280	81345069	203, 1, GroupUn.6971:896-1302	plot apiMel1
036	2005	apiMel2	tbd	tbd	91284	38	4467103	295	110415978	234, 1, Group8:8120781-8121249	plot apiMel2
037	2005	apiMel3	tbd	tbd	100380	38	5142600	318	146199642	234, 1, Group8:9788059-9788527	plot apiMel3
038	2011	apiMel4	GCF_000002195.4	Atlas assembly system v. before 2011	101842	38	5017659	328	182902657	234, 1, Group8:11123745-11124213	plot apiMel4
039	2009	aplCal1	tbd	tbd	362965	33	14931570	1162	1691576982	254, 1, scaffold_486:233208-233716	plot aplCal1
040	2014	aptFor1	GCF_000699145.1	SOAPdenovo v. 1.6	107781	59	13547646	120	162744750	2370, 1, KL225745:613720-618460	plot aptFor1
041	2015	aptMan1	GCF_001039765.1	tbd	282012	72	84603242	159	396269019	13772, 1, NW_013987314v1:1452350-1479894	plot aptMan1
042	2014	aquChr1	GCA_000696035.1	ABySS v. 1.3.6	91231	42	4160856	43	70439237	98, 1, KK848043:4630547-4630743	plot aquChr1
043	2015	aquChr2	GCA_000766835.1	AllPaths-LG v. August 2013	27433	39	1833575	548	117223799	6351, 4, KN265844v1:264833-277538	plot aquChr2
044	2013	araMac1	GCA_000400695.1	CLC Genomics Workbench v. 4.9	20437	44	1789638	1788	35728109	241, 2, KE047968:4314-4797	plot araMac1
045	2013	araTha1	GCF_000001735.3	tbd	42547	40	2336394	4141	237921318	415, 1, chr3:12226092-12226922	plot araTha1
046	2015	ascSuu1	GCA_000298755.1	SOAPdenovo v. 1.04	26863	62	2864530	136	30068625	680, 1, JH878990v1:516922-518282	plot ascSuu1
047	2013	astMex1	GCF_000372685.1	AllPathsLG v. Jan-2013	300773	36	13069886	344	878056894	647, 1, KB872443:19678-20972	plot astMex1
048	2013	balAcu1	GCF_000493695.1	SOAPdenovo v. 16-Mar-2012	317691	37	19886322	7511	2584004816	5160, 1, KI537228:6365-16685	plot balAcu1
049	2014	balPav1	GCA_000709895.1	SOAPdenovo v. 1.6	17941	37	1027192	127	51713556	375, 1, KL478702:45795-46545	plot balPav1
050	2015	bisBis1	GCA_000754665.1	MaSuRCA v. 2.1.0	978698	37	43835440	8700.5	8769740309	338, 1, KN265095v1:5133899-5134575	plot bisBis1
051	2006	borEut13	tbd	tbd	95035	35	3952633	847	394283618	125, 1, chr4:75059497-75059747	plot borEut13
052	2014	bosMut1	GCA_000298355.1	SOAPdenovo v. 1.14	753906	35	34311202	8148	6401204703	2625, 1, JH881616:2629253-2634503	plot bosMut1
053	2004	bosTau1	tbd	tbd	288698	36	12358995	3236	1418202012	332, 1, SCAFFOLD225782:8549-9213	plot bosTau1
054	2006	bosTau3	tbd	tbd	1160083	37	52864419	9334	11023049142	332, 1, chr5:47411355-47412019	plot bosTau3
055	2008	bosTau4	tbd	tbd	1169587	37	54614790	9381	11147570812	332, 1, chr5:52417493-52418157	plot bosTau4
056	2010	bosTau5	tbd	tbd	1143604	37	53681590	9372	10891150076	474, 1, chr1:65205480-65206428	plot bosTau5
057	2011	bosTau6	GCF_000003055.5	UMD Overlapper v. 2009; additional processing	1243148	37	57730762	8928	11394478150	923, 1, chr22:31476636-31478482	plot bosTau6
058	2012	bosTau7	tbd	tbd	1266397	37	58263825	8876	11556236690	332, 1, chr5:52215273-52215937	plot bosTau7
059	2014	bosTau8	GCF_000003055.5	UMD Overlapper v. 2009; additional processing	1243008	37	57724227	8930	11394290218	923, 1, chr22:31476636-31478482	plot bosTau8
060	2009	bosTauMd3	tbd	tbd	1211279	37	56451996	9197	11353955385	923, 1, chr22:31476636-31478482	plot bosTauMd3
061	2010	braFlo2	tbd	tbd	335984	40	21237833	1088	1244816809	1512, 1, Bf_V2_32:3091839-3094863	plot braFlo2
062	2012	braRap1	GCF_000309985.1	SOAPdenovo v. 1.04	74411	41	5348931	2750	314357742	1288, 2, chrA5:13328835-13331412	plot braRap1
063	2008	bruMal1	tbd	tbd	70008	37	3314327	264	46555408	321, 1, Bmal_supercontigDegenerate10576:240-882	plot bruMal1
064	2015	bruMal2	tbd	tbd	72743	38	3759073	402	111607550	453, 1, Bmal_v3_scaffold8088:119-1025	plot bruMal2
065	2013	bubBub1	GCF_000471725.1	MaSuRCA v. 1.8.3	975518	37	43577563	7913	8291159158	576, 1, KI419055:2574813-2575965	plot bubBub1
066	2014	bucRhi1	GCF_000710305.1	SOAPdenovo v. 1.6	43210	56	3393282	73	48672532	715, 1, KL533494:44624-46054	plot bucRhi1
068	2015	burXyl1	tbd	tbd	12719	36	772590	1694	51888226	134, 1, scaffold01254:876286-876554	plot burXyl1
069	2011	caeAng1	GCA_000165025.1	Velvet v. 0.7.56	100045	42	4176946	305	156635287	71, 1, scafRNAPATHr22140:12806-12948	plot caeAng1
070	2015	caeAng2	tbd	tbd	148180	41	6380576	369	202631392	131, 1, Cang_2012_03_13_00262:54689-54951	plot caeAng2
071	2008	caeJap1	tbd	tbd	54911	37	2702441	669	184995823	179, 1, chrUn:91344286-91344644	plot caeJap1
072	2009	caeJap2	tbd	tbd	61394	38	3566172	1128.5	219090212	153, 1, chrUn:143662847-143663153	plot caeJap2
073	2010	caeJap2a	tbd	tbd	59499	38	3480262	973	192672580	153, 1, Cjap_Contig3098:12088-12394	plot caeJap2a
074	2010	caeJap3	tbd	tbd	47394	36	2103165	360	75708219	176, 1, ABLE03028834:844-1196	plot caeJap3
075	2011	caeJap4	GCA_000147155.1	Celera assembler v. 6.0	66567	37	3336966	815	226847582	176, 1, Scaffold17893:329482-329834	plot caeJap4
076	2007	caePb1	tbd	tbd	67100	38	3590813	2009	281616954	168, 1, chrUn:161968878-161969214	plot caePb1
077	2008	caePb2	tbd	tbd	71710	39	3958202	3788.5	420907669	239, 1, chrUn:97561553-97562031	plot caePb2
078	2011	caePb3	GCA_000143925.2	PCAP v. 9/3/04	71721	39	3951441	3770	420080585	239, 1, Scfld02_132:346628-347106	plot caePb3
079	2005	caeRem1	tbd	tbd	78288	40	4264984	1786	318215569	193, 1, SuperCont3184:2552-2938	plot caeRem1
080	2007	caeRem2	tbd	tbd	102926	41	5484074	859	350685995	193, 1, chrUn:145434398-145434784	plot caeRem2
081	2008	caeRem3	tbd	tbd	69306	40	3736990	2408	318941600	181, 1, chrUn:147913992-147914354	plot caeRem3
082	2011	caeRem4	GCF_000149515.1	tbd	70702	39	3779779	2320	319257206	181, 1, Crem_Contig169:93478-93840	plot caeRem4
083	2011	caeSp111	GCA_000186765.1	Celera assembler v. 6.0	16576	36	783303	2230.5	70961296	161, 1, Scaffold630:3047861-3048183	plot caeSp111
084	2015	caeSp51	tbd	tbd	20559	36	877191	1869	57741956	109, 1, Csp5_scaffold_04217:6885-7103	plot caeSp51
085	2011	caeSp91	tbd	tbd	67737	36	3110776	1418	221671479	195, 1, Scaffold7109:118818-119208	plot caeSp91
086	2014	calAnn1	GCF_000699085.1	SOAPdenovo v. 1.6	115073	39	9049123	590	450885170	1104, 1, KL218440:2851016-2853224	plot calAnn1
087	2007	calJac1	tbd	tbd	1406061	36	81133160	2838	7224876806	342, 1, Contig38531:3004-3688	plot calJac1
088	2010	calJac3	GCF_000004665.1	PCAP v. 2009	933429	35	41296063	4319	6020954211	342, 1, chrUn_GL289980:2548-3232	plot calJac3
089	2013	calMil1	GCF_000165045.1	Celera v. 6.1	365912	35	15637123	1428	1794921679	144, 1, KI635985:586597-586885	plot calMil1
090	2012	camFer1	GCF_000311805.1	SOAPdenovo v. V1.05	101845	33	6622167	162	292517673	934, 1, KB017230:2215149-2217017	plot camFer1
091	2004	canFam1	tbd	tbd	708312	35	27662849	8269	6176862199	292, 1, chr7:79846479-79847063	plot canFam1
092	2005	canFam2	tbd	tbd	953541	35	38683290	7862	8147344317	746, 1, chrUn:76334072-76335564	plot canFam2
093	2012	canFam3	GCF_000002285.3	Arachne v. April 2010	971687	35	40018993	7312	7976595682	292, 1, chr7:77369247-77369831	plot canFam3
094	2009	canFamPoodle1	GCA_000181415.1	tbd	46485	34	1777637	138	18530637	210, 1, AACN010470517:102-522	plot canFamPoodle1
095	2005	canHg12	tbd	tbd	33765	35	1344552	617	139440788	121, 1, 12:76878573-76878815	plot canHg12
096	2014	capCar1	GCF_000700745.1	SOAPdenovo v. 1.6	63810	36	3017510	389.5	221999357	1265, 2, KL360999:16916-19447	plot capCar1
097	2013	capHir1	GCF_000317765.1	SOAPdenovo v. 1.03	620672	36	27059872	6750	4701845701	4915, 1, chr24:61180186-61190016	plot capHir1
098	2014	carCri1	GCF_000690535.1	SOAPdenovo v. 1.6	20461	37	1163337	68	30549622	529, 1, KK515247:46620-47678	plot carCri1
099	2006	cavPor2	tbd	tbd	153670	41	9672753	3682	600037188	260, 1, scaffold_228157:14475-14995	plot cavPor2
100	2008	cavPor3	GCF_000151735.1	unknown v. before 2008	423409	39	22453984	5720	3122228393	260, 1, scaffold_239:788868-789388	plot cavPor3
101	2003	cb1	tbd	tbd	36051	37	2442691	558	98718219	191, 1, chrUn:90311348-90311730	plot cb1
102	2005	cb2	tbd	tbd	35978	37	2444306	560	98588417	317, 1, chrIII:126724-127358	plot cb2
103	2007	cb3	tbd	tbd	35990	37	2451574	568.5	99618994	317, 1, chrIII:11646590-11647224	plot cb3
104	2011	cb4	tbd	tbd	36155	37	2519414	578	100960462	317, 1, chrIII:76433-77067	plot cb4
105	2011	ce10	tbd	tbd	33806	38	1760308	427	82769023	1500, 1, chrIV:5554976-5557976	plot ce10
106	2013	ce11	GCF_000002985.6	tbd	33816	38	1760641	427	82800067	1500, 1, chrIV:5554985-5557985	plot ce11
107	2004	ce2	tbd	tbd	33799	38	1759889	427	82752389	1500, 1, chrIV:5554978-5557978	plot ce2
108	2005	ce3	tbd	tbd	33799	38	1759889	427	82752398	1500, 1, chrIV:5554972-5557972	plot ce3
109	2007	ce4	tbd	tbd	33792	38	1759610	427	82743753	1500, 1, chrIV:5554972-5557972	plot ce4
110	2007	ce5	tbd	tbd	33794	38	1759781	427	82743927	1500, 1, chrIV:5554972-5557972	plot ce5
111	2008	ce6	tbd	tbd	33794	38	1759781	427	82743927	1500, 1, chrIV:5554972-5557972	plot ce6
112	2009	ce7	tbd	tbd	33806	38	1760308	427	82769007	1500, 1, chrIV:5554972-5557972	plot ce7
113	2009	ce8	tbd	tbd	33806	38	1760308	427	82769007	1500, 1, chrIV:5554972-5557972	plot ce8
114	2010	ce9	tbd	tbd	33806	38	1760308	427	82769007	1500, 1, chrIV:5554972-5557972	plot ce9
115	2012	cerSim1	GCF_000283155.1	ALLPATHS v. R41370	182565	35	7975290	7694	1503937586	217, 1, JH767741:19156533-19156967	plot cerSim1
116	2014	chaVoc1	GCF_000708025.1	SOAPdenovo v. 1.6	53439	41	4896801	1813	256127930	1729, 2, KL408233:1252791-1256250	plot chaVoc1
117	2014	chaVoc2	GCF_000708025.1	SOAPdenovo v. 1.6	53430	41	4896157	1812	256095280	1729, 2, KL871243:1252791-1256250	plot chaVoc2
118	2013	cheMyd1	GCF_000344595.1	SOAPdenovo v. 1.05	338286	38	27175756	2112	1711904320	2073, 1, KB534909:887250-891396	plot cheMyd1
119	2012	chiLan1	GCA_000276665.1	ALLPATHS v. R40776	162447	34	8332343	5673	1154905940	274, 1, JH721868:33430685-33431233	plot chiLan1
120	2013	chlSab1	tbd	tbd	933660	34	44465888	4819	6164212406	1783, 1, chrY:1553648-1557214	plot chlSab1
121	2014	chlSab2	GCF_000409795.2	ALLPATHS and Newbler v. 13-Feb-2013	934123	34	44534038	4823	6168422847	1783, 1, chrY:1553648-1557214	plot chlSab2
122	2014	chlUnd1	GCF_000695195.1	SOAPdenovo v. 1.6	28454	43	1824188	165	94696650	497, 1, KK750077:105999-106993	plot chlUnd1
123	2008	choHof1	GCA_000164785.1	tbd	209811	36	9540548	431	262030496	307, 1, scaffold_3919:20103-20717	plot choHof1
124	2012	chrAsi1	GCF_000296735.1	allpaths v. R42316 HAPLOIDIFY=True	805638	33	32771937	6438	6141282666	8327, 3, JH823352:5306275-5322931	plot chrAsi1
125	2012	chrPic1	tbd	tbd	281953	43	16725223	1275	1210278039	255, 1, JH584700:738019-738529	plot chrPic1
126	2014	chrPic2	GCA_000241765.2	Newbler v. 2.6	313473	43	18318992	1246	1347589030	269, 1, chrUn_KK085497v1:1941-2479	plot chrPic2
127	2003	ci1	GCA_000183065.1	tbd	48663	39	2653274	626	122189601	486, 1, Scaffold_604:30085-31057	plot ci1
128	2005	ci2	tbd	tbd	119965	43	8287326	1961	566064667	358, 1, scaffold_83:159982-160698	plot ci2
129	2011	ci3	GCF_000224145.1	tbd	48178	39	2574684	692	149951145	486, 1, chrUn_NW_004190340v1:65099-66071	plot ci3
130	2004	cioSav1	tbd	tbd	123843	39	6363601	2503	618224769	189, 1, ps_297:30448-30826	plot cioSav1
131	2005	cioSav2	tbd	tbd	157468	38	7731855	2875	819500559	280, 1, reftig_238:125039-125599	plot cioSav2
132	2015	colAng1	GCF_000951035.1	AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2	732293	34	34516665	6816	5701906030	219, 1, NW_012114455v1:1212718-1213156	plot colAng1
133	2013	colLiv1	GCF_000337935.1	SOAPdenovo v. 2.0	139510	33	6394287	112	419571584	3080, 2, KB375367:1029739-1035900	plot colLiv1
134	2014	colStr1	GCF_000690715.1	SOAPdenovo v. 1.6	55406	40	3066780	131	154687137	309, 1, KK533057:6873-7491	plot colStr1
135	2012	conCri1	GCF_000260355.1	AllPaths v. 2012	253120	35	11854934	7807	2109955223	265, 1, JH655888:40209348-40209878	plot conCri1
136	2014	corBra1	GCF_000691975.1	SOAPdenovo v. 1.6	91630	37	6371852	297	248570100	1583, 1, KK718913:5901493-5904659	plot corBra1
137	2014	corCor1	GCF_000738735.1	AllPaths v. Allpaths-LG version 41687	58556	36	3043376	370	184023111	1935, 1, KL997525:15617964-15621834	plot corCor1
138	2013	cotJap1	GCA_000511605.1	Soapdenovo v. 1.0.5b; bwa v. 0.5.9; SSPACE v. 1.2	7329	33	280548	75	2914174	214, 1, DF262918:84572-85000	plot cotJap1
139	2013	criGri1	GCF_000419365.1	SOAPdenovo v. 2.2	392434	34	24519809	4676	2562035140	2419, 1, KE383702:1200830-1205668	plot criGri1
140	2017	criGriChoV1	GCF_000223135.1	SOAPdenovo v. 1.05	399488	34	20807116	3409	2361128543	2346, 1, NW_003614503v1:231537-236229	plot criGriChoV1
141	2014	cucCan1	GCF_000709325.1	SOAPdenovo v. 1.6	126008	42	16101261	2142	633238955	2278, 1, KL448309:4464943-4469499	plot cucCan1
142	2014	cynSem1	GCF_000523025.1	SOAPdenovo v. April-2011	83655	37	6369004	261	184971677	1536, 1, chr1:16715796-16718868	plot cynSem1
143	2014	cypVar1	GCA_000732505.1	AllPaths v. May 2014	136313	39	9823682	1299	502219020	2138, 1, KL652705:564642-568918	plot cypVar1
144	2015	danRer10	GCF_000002035.5	tbd	830199	36	39955973	1138	3506165088	829, 1, chr7:19536660-19538318	plot danRer10
145	2006	danRer4	tbd	tbd	967867	37	3554929771106085888	1483	-5209059568647030784	829, 1, chr7:22863126-22864784	plot danRer4
146	2007	danRer5	tbd	tbd	878638	36	43432292	1103	3637100049	829, 1, chr7:21951036-21952694	plot danRer5
147	2009	danRer6	tbd	tbd	1054071	36	55306251	1381	4517471825	2083, 1, chr10:31284766-31288932	plot danRer6
148	2010	danRer7	GCF_000002035.4	tbd	910457	36	43398798	1289	3925402743	829, 1, chr7:20946224-20947882	plot danRer7
149	2005	dasNov1	tbd	tbd	154605	37	7624828	1001	335128473	306, 1, scaffold_52384:6155-6767	plot dasNov1
150	2008	dasNov2	tbd	tbd	208970	39	11666796	2156	635204397	306, 1, scaffold_34025:7890-8502	plot dasNov2
151	2012	dasNov3	GCF_000208655.1	Celera Assembler v. 6.0; Atlas-Link; Atlas-Gap-Fill	482246	37	24275809	3870	2851995366	1375, 1, JH574868:466920-469670	plot dasNov3
152	2014	dicLab1	GCA_000689215.1	tbd	204757	36	11489728	924	691437386	841, 1, HG916851:32290203-32291885	plot dicLab1
153	2008	dipOrd1	GCA_000151885.1	tbd	1877441	35	85259926	2185	7963556509	183, 1, scaffold_30074:4167-4533	plot dipOrd1
154	2015	dirImm1	tbd	tbd	3309	36	316992	58	1820327	1613, 1, nDi_2_2_scaf00284:19002-22228	plot dirImm1
155	2003	dm1	tbd	tbd	12199	50	1260685	3445	60460276	3882, 2, chr2L:1894810-1902575	plot dm1
156	2004	dm2	tbd	tbd	13213	51	1372092	3723	67342596	3882, 2, chr2L:1893145-1900910	plot dm2
157	2006	dm3	tbd	tbd	113222	40	6787673	2412	622002007	3882, 2, chr2L:1893145-1900910	plot dm3
158	2014	dm6	GCF_000001215.4	tbd	48031	48	4403254	3448	254474999	3882, 2, chr2L:1893145-1900910	plot dm6
159	2004	dp2	tbd	tbd	16790	44	1110948	926	42217528	227, 1, Contig7446_Contig2444:1979445-1979899	plot dp2
160	2004	dp3	tbd	tbd	20334	44	1389766	1239	62703720	312, 1, chrU:9357988-9358612	plot dp3
161	2006	dp4	tbd	tbd	53060	46	3495255	2437	228127096	312, 1, Unknown_singleton_2460:32411-33035	plot dp4
162	2014	droAlb1	GCA_000298335.1	SOAPdenovo v. 1.04	126521	30	3970849	70	35343627	76, 1, JH853217:889-1041	plot droAlb1
163	2004	droAna1	tbd	tbd	67882	40	3659056	697	196198368	572, 1, 2446670:645-1789	plot droAna1
164	2005	droAna2	tbd	tbd	248263	42	14624595	918	748771139	572, 1, scaffold_13499:1095908-1097052	plot droAna2
165	2006	droAna3	GCF_000005115.1	tbd	246334	42	14515690	927	745835855	572, 1, scaffold_13499:1092668-1093812	plot droAna3
166	2013	droBia2	GCA_000233415.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	46906	42	2807408	2591	175612579	2241, 3, AFFD02006372:54233-58717	plot droBia2
167	2013	droBip2	GCA_000236285.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_calland_upgrade.pl v. 1.0	54693	39	2946335	1371	204354268	179, 1, KB463958:131929-132287	plot droBip2
168	2013	droEle2	GCA_000224195.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATKv. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	34862	41	2092385	2187	135919965	270, 1, KB458613:1953986-1954526	plot droEle2
169	2005	droEre1	tbd	tbd	96336	44	5585722	674	191777516	359, 1, scaffold_1301:371-1089	plot droEre1
170	2006	droEre2	GCF_000005135.1	tbd	95081	44	5535640	676	190524603	359, 1, scaffold_1301:371-1089	plot droEre2
171	2013	droEug2	GCA_000236325.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	59111	40	3495099	1518	181127987	141, 1, KB464979:6084-6366	plot droEug2
172	2013	droFic2	GCA_000220665.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	21964	44	1418464	2380.5	83742114	190, 1, AFFG02001364:4041-4421	plot droFic2
173	2005	droGri1	tbd	tbd	458551	40	21432909	509	538034457	491, 1, scaffold_2211:899-1881	plot droGri1
174	2006	droGri2	GCF_000005155.2	tbd	302510	40	14467041	522	418546843	188, 1, scaffold_6592:1167-1543	plot droGri2
175	2013	droKik2	GCA_000224215.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	31358	41	1855833	1533.5	112074726	117, 1, KB459586:778466-778700	plot droKik2
176	2013	droMir2	GCA_000269505.2	Newbler v. 2.6	18368	45	1204033	1747	75101816	140, 1, chr2:3040735-3041015	plot droMir2
177	2004	droMoj1	tbd	tbd	69928	38	3220037	310	78711524	225, 1, contig_34282:247-697	plot droMoj1
178	2005	droMoj2	tbd	tbd	102140	41	5658627	1086	363630258	202, 1, scaffold_6540:14391223-14391627	plot droMoj2
179	2006	droMoj3	GCF_000005175.2	tbd	101230	41	5606832	1114	361818537	202, 1, scaffold_6540:14384339-14384743	plot droMoj3
180	2005	droPer1	GCF_000005195.2	tbd	75046	45	5536401	2595	325634621	580, 2, super_62:246420-247581	plot droPer1
181	2013	droPse3	GCF_000001765.3	PBJelly v. 12.8.2; Atlas genome assembly	53481	45	3494617	2480	231367590	312, 1, chrUn_CH674897_1:32411-33035	plot droPse3
182	2013	droRho2	GCA_000236305.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	68118	41	4002283	1672	235074913	205, 1, AFPP02028413:1419-1829	plot droRho2
183	2005	droSec1	GCA_000005215.1	tbd	127886	38	6652375	465	177925676	360, 1, super_6483:1086-1806	plot droSec1
184	2005	droSim1	tbd	tbd	47915	42	2874159	1400	171101666	217, 1, chr3R_random:168062-168496	plot droSim1
185	2016	droSim2	GCF_000754195.2	Velvet v. 1.1.04	10385	40	551061	466	26120972	217, 1, chrUn_NW_015496898v1:4674-5108	plot droSim2
186	2013	droSuz1	GCA_000472105.1	SOAPdenovo v. 2	117859	46	12342639	2277	517597655	4939, 1, KI419149:2637663-2647541	plot droSuz1
187	2013	droTak2	GCA_000224235.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	48870	41	2816693	2013	202395837	306, 1, AFFI02002878:4290-4902	plot droTak2
188	2004	droVir1	tbd	tbd	147648	35	6630839	429	239695710	244, 1, scaffold_0:5707381-5707869	plot droVir1
189	2005	droVir2	tbd	tbd	432783	30	17539885	481	757905036	244, 1, scaffold_13049:18877549-18878037	plot droVir2
190	2006	droVir3	GCF_000005245.1	tbd	407188	30	16757243	495	747769004	244, 1, scaffold_13049:18848863-18849351	plot droVir3
191	2006	droWil1	GCF_000005925.1	tbd	118355	42	7234894	1695	472632964	954, 1, scaffold_181130:9135849-9137757	plot droWil1
192	2013	droWil2	GCF_000005925.1	tbd	118240	42	7228999	1695	472142234	954, 1, CH964272:9135849-9137757	plot droWil2
193	2004	droYak1	tbd	tbd	81563	43	6228480	3752	459910434	851, 1, chr3L:24830341-24832043	plot droYak1
194	2005	droYak2	tbd	tbd	93441	45	6941572	3518	501527798	1122, 2, chrU:731511-733756	plot droYak2
195	2013	droYak3	GCF_000005975.2	tbd	85136	46	6497582	2641	404384429	1122, 2, chrUn_CH892674_1:731511-733756	plot droYak3
198	2005	echTel1	tbd	tbd	116281	36	5131198	673	256369374	229, 1, scaffold_292508:7264-7722	plot echTel1
199	2013	echTel2	GCF_000313985.1	ALLPATHS v. R37599	189447	35	10276263	2860	1049531975	345, 2, JH980443:629844-630535	plot echTel2
200	2014	egrGar1	GCF_000687185.1	SOAPdenovo v. 1.6	74371	43	9954381	893	271113520	2791, 1, KK500861:718810-724392	plot egrGar1
201	2013	eidHel1	GCA_000465285.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	33439	35	1366001	126	36481318	7647, 43, AWHC01288168:1-15337	plot eidHel1
202	2012	eleEdw1	GCF_000299155.1	allpaths v. R42301 HAPLOIDIFY=True	356320	35	16209356	6988	2779337445	408, 1, JH947532:444932-445748	plot eleEdw1
203	2012	eptFus1	GCF_000308155.1	ALLPATHS v. R40371	222087	35	13225570	2177	1173955475	211, 1, JH977672:6077044-6077466	plot eptFus1
204	2008	equCab2	tbd	tbd	393206	37	17857641	2842	2161091933	526, 1, chr14:85222625-85223677	plot equCab2
205	2014	equPrz1	GCA_000696695.1	SOAPdenovo v. 1.05	276230	49	14219094	107	801082402	1923, 1, KK950139:433764-437610	plot equPrz1
206	2007	eriEur1	tbd	tbd	406856	36	19671809	3390	2085450281	302, 1, scaffold_334489:6021-6625	plot eriEur1
207	2013	eriEur2	GCF_000296755.1	allpaths v. R41008	861216	34	39995023	7216	6808639747	13780, 5, JH835378:10400-37964	plot eriEur2
208	2014	esoLuc1	GCA_000721915.1	AllPaths v. 43500	309026	36	12717997	109	633934424	1803, 1, KL593524:286555-290161	plot esoLuc1
209	2006	euaGli13	tbd	tbd	85054	35	3561209	981	360128068	95, 1, 4-7:24024058-24024248	plot euaGli13
210	2014	eurHel1	GCF_000690775.1	SOAPdenovo v. 1.6	48033	41	2646849	3690	271468700	462, 1, KK561721:27808-28732	plot eurHel1
211	2006	eutHer13	tbd	tbd	75114	37	3312319	1220	345926827	125, 1, 5-6:21163986-21164236	plot eutHer13
212	2013	falChe1	GCF_000337975.1	SOAPdenovo v. 1.4	33448	36	3028131	144	71160661	1589, 1, KB397979:787306-790484	plot falChe1
213	2013	falPer1	GCF_000337955.1	SOAPdenovo v. 1.4	32904	38	2747346	156	69981752	1888, 1, KB390863:6987566-6991342	plot falPer1
214	2006	felCat1	tbd	tbd	403441	42	30873956	930	1162418824	482, 1, scaffold_30190:390-1354	plot felCat1
215	2006	felCat3	tbd	tbd	403441	42	30873956	930	1162418824	482, 1, scaffold_30190:390-1354	plot felCat3
216	2010	felCat4	GCA_000003115.1	tbd	405500	38	28131413	3301	2364466223	5373, 10, chrA1:165589032-165599787	plot felCat4
217	2011	felCat5	GCF_000181335.1	Celera Assembler v. 6.1	453806	34	18818004	7873	3800500393	238, 1, chrB2:9942275-9942751	plot felCat5
218	2014	felCat8	GCF_000181335.2	CABOG v. 6.2; MaSuRCA assembler v. 8.0; GAA v. 1.0	611459	36	31537253	5064	4215814492	482, 1, chrUn_AANG03063521v1:145-1109	plot felCat8
219	2003	fr1	tbd	tbd	65564	35	3413218	165	124234021	304, 1, chrUn:169005183-169005791	plot fr1
220	2007	fr2	tbd	tbd	104956	35	5519798	156	261084207	151, 1, chrUn:356162839-356163141	plot fr2
221	2011	fr3	GCF_000180615.1	tbd	105765	35	5702900	157	257018230	151, 1, HE592488:202-504	plot fr3
222	2014	fulGla1	GCF_000690835.1	SOAPdenovo v. 1.6	20338	37	1197675	93	36399474	576, 1, KK595554:8470-9622	plot fulGla1
223	2011	gadMor1	GCA_000231765.1	tbd	523023	30	17042881	24	573821154	131, 1, HE571852:62524-62786	plot gadMor1
224	2004	galGal2	tbd	tbd	157813	51	15224008	3723	846924205	208, 1, chr2:94743278-94743694	plot galGal2
225	2006	galGal3	tbd	tbd	243371	62	25066425	3004	1138149811	208, 1, chr2:97262115-97262531	plot galGal3
226	2009	galGal4	GCF_000002315.3	Celera Assembler v. 5.4	78961	39	4732239	2968	493569103	17591, 16, chrZ:21320544-21355741	plot galGal4
227	2016	galGal5	GCF_000002315.4	MHAP/PBcR v. 8.2beta	985564	36	47990278	1925	3490824745	17591, 16, chrZ:21461674-21496871	plot galGal5
228	2014	galVar1	GCF_000696425.1	SOAPdenovo2 v. April 2014	1097360	61	95653951	510	2494777971	1998, 1, NW_007726895v1:52419-56415	plot galVar1
229	2006	gasAcu1	tbd	tbd	131262	39	7836949	3635	770629287	296, 1, chrUn:59780312-59780904	plot gasAcu1
230	2006	gasAsc0	GCA_000180675.1	tbd	116031	39	6613325	1417	518945407	316, 1, contig_16726:674-1306	plot gasAsc0
231	2013	gavGan0	tbd	tbd	140159	79	22649136	5005	732648585	2263, 10, scaffold7460:20241-24776	plot gavGan0
232	2014	gavSte1	GCF_000690875.1	SOAPdenovo v. 1.6	24295	36	1352476	75	47417993	302, 1, KK611813:2739-3343	plot gavSte1
233	2012	geoFor1	GCF_000277835.1	SOAPdenovo v. 2.01	113187	37	6785044	204	268468600	1013, 1, JH739970:2776008-2778034	plot geoFor1
234	2006	gliRes13	tbd	tbd	31976	36	1385928	1661	143989628	95, 1, 4-7:15697982-15698172	plot gliRes13
235	2008	gorGor1	tbd	tbd	2032669	34	79855216	1003	5481108486	368, 1, Supercontig_0046707:4946-5682	plot gorGor1
236	2009	gorGor2	tbd	tbd	2199951	34	102221723	1655	9056398920	6680, 10, chr11_104921458_1199196:710959-724328	plot gorGor2
237	2016	gorGor5	tbd	tbd	3555119	33	133654191	4102	21270991545	338, 1, CYUI01005848v1:13590-14266	plot gorGor5
238	2010	haeCon1	tbd	tbd	109810	42	5802860	1251.5	319005845	196, 1, Hcon_Contig0025586:3955-4347	plot haeCon1
239	2015	haeCon2	tbd	tbd	53818	43	3892613	570	187299643	2147, 1, scaffold_1557:10532-14826	plot haeCon2
240	2014	halAlb1	GCF_000691405.1	SOAPdenovo v. 1.6	13685	36	754065	301	41720730	548, 2, KK653364:30569-31666	plot halAlb1
241	2014	halLeu1	GCF_000737465.1	SOAPdenovo2 v. May 2014	16099	40	1241068	4586	98353830	79, 1, KL869431:1084034-1084192	plot halLeu1
242	2011	hapBur1	GCF_000239415.1	ALLPATHS-LG v. R35951	34584	37	2342045	3524.5	202958431	10390, 20, JH425331:1373378-1394177	plot hapBur1
243	2015	hetBac1	GCA_000223415.1	Celera assembler v. 6.0	3302	51	353946	673	12041725	317, 1, GL996135v1:102345-102979	plot hetBac1
244	2011	hetGla1	tbd	tbd	209320	41	29824494	3329	1244942735	3930, 1, JH170644:110745-118605	plot hetGla1
245	2012	hetGla2	GCF_000247695.1	AllPaths v. R39605	103053	34	6024624	6941	791605735	158, 1, JH602100:6973404-6973720	plot hetGla2
246	2009	hg19	tbd	tbd	1038910	33	38972807	7299	8376915441	225, 1, chr13:80531634-80532084	plot hg19
247	2013	hg38	GCF_000001405.26	tbd	1356745	34	52620217	7485	11152418001	225, 1, chr13:79957499-79957949	plot hg38
248	2006	homIni14	tbd	tbd	986594	33	36270527	7838	8265721353	294, 1, chr20:9839450-9840038	plot homIni14
249	2006	homNea0	tbd	tbd	148	30	4725	14.5	2669	37, 1, 151586_3339_2553:20-94	plot homNea0
251	2012	jacJac1	GCF_000280705.1	ALLPATHS v. R41689 HAPLOIDIFY=True	430190	34	18722704	6295	3230508925	276, 1, JH725590:3244288-3244840	plot jacJac1
252	2012	latCha1	GCF_000225785.1	AllPaths v. R36819	261629	35	10353349	1038	1285603914	182, 1, JH128998:42125-42489	plot latCha1
253	2006	lauRas13	tbd	tbd	43311	36	1891314	1493	210427636	125, 1, 5-6:22761072-22761322	plot lauRas13
254	2014	lepDis1	GCF_000691785.1	SOAPdenovo v. 1.6	16795	33	749994	94	31438992	199, 1, JJRK01010260:4452-4850	plot lepDis1
255	2012	lepOcu1	GCF_000242695.1	AllPaths v. R38293	77276	37	4579890	1084	350156295	488, 2, chrLG5:14840992-14841969	plot lepOcu1
256	2013	lepWed1	GCF_000349705.1	allpaths v. R41856 HAPLOIDIFY=True	348917	34	19316918	7787	2911858141	168, 1, KB716722:387801-388137	plot lepWed1
257	2013	letCam1	GCA_000466285.1	Newbler v. 2.7	768187	35	32420899	153	1525909318	207, 1, KE997215:997-1411	plot letCam1
258	2016	linHum0	GCF_000217595.1	CABOG v. 5.3	42080	41	2313367	5018	259661061	101, 1, NW_012160424:64875-65077	plot linHum0
259	2013	lipVex1	GCF_000442215.1	SOAPdenovo v. 2.01	514863	35	27315468	8421	4503138248	6076, 1, KE559913:905157-917309	plot lipVex1
260	2015	loaLoa1	GCA_000183805.3	Newbler v. 2.1-PreRelease-4/28/2009	15889	37	1294459	188	16478676	109, 1, JH717180v1:404-622	plot loaLoa1
261	2005	loxAfr1	tbd	tbd	357658	40	19137870	2747	1623517964	191, 1, scaffold_68013:5261-5643	plot loxAfr1
262	2008	loxAfr2	tbd	tbd	452605	42	26444359	3136	2138902576	191, 1, scaffold_2221:111993-112375	plot loxAfr2
263	2009	loxAfr3	GCF_000001905.1	tbd	417305	36	18681349	7538	3438092453	223, 1, scaffold_12:19769054-19769500	plot loxAfr3
264	2008	macEug1	tbd	tbd	165545	37	7960226	131	298753576	227, 1, Scaffold4099:16828-17282	plot macEug1
265	2010	macEug2	GCA_000004035.1	tbd	232014	38	11656107	242	580939886	216, 1, GL085287:42394-42826	plot macEug2
266	2013	macFas5	GCF_000364345.1	SOAPdenovo v. 1.0.5, SRPRISM v. 2.4; ARGO v. 0.1	1213705	34	48732124	5488	8623449917	215, 1, chr12:93264384-93264814	plot macFas5
267	2016	macNem1	GCF_000956065.1	AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2; PBJelly2 v. 14.9.9	914925	34	43337844	5927	6575951123	2580, 4, NW_012015577v1:7214313-7219476	plot macNem1
268	2014	manPen1	GCA_000738955.1	SOAPdenovo v. May 2014	304420	55	33766689	853	887951462	4944, 1, KN012191:2418-12306	plot manPen1
269	2014	manVit1	GCF_000692015.1	SOAPdenovo v. 1.6	75103	35	4570292	206	245456943	5268, 1, KK733349:4046063-4056599	plot manVit1
271	2012	mayZeb1	GCF_000238955.1	AllPaths v. R37043	48899	38	3205287	4159	307830483	9605, 105, JH720664:938440-957754	plot mayZeb1
272	2013	megLyr1	GCA_000465345.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	25192	34	1014702	112	35852812	149, 1, KI041466:2479-2777	plot megLyr1
273	2010	melGal1	tbd	tbd	25253	45	1794885	2825	133788059	169, 1, chr3:54352580-54352918	plot melGal1
274	2015	melGal5	GCF_000146605.2	MaSuRCA v. 1.9.2	101903	36	4643970	197	188019328	173, 1, chrUn_NW_011217171v1:1-347	plot melGal5
275	2010	melHap1	GCA_000172435.1	tbd	12515	41	832837	375	21806223	157, 1, MhA1_Contig2844:850-1164	plot melHap1
276	2010	melInc1	GCA_000180415.1	tbd	19330	40	1244828	558	47252172	183, 1, Minc_Contig6373:3669-4035	plot melInc1
277	2015	melInc2	tbd	tbd	22743	41	1594354	1067	83086394	183, 1, MiV1ctg2756:3669-4035	plot melInc2
278	2012	melUnd1	GCF_000238935.1	Celera v. 6.1	99875	41	5463070	6271	754338919	120, 1, JH556605:5210251-5210491	plot melUnd1
279	2014	merNub1	GCF_000691845.1	SOAPdenovo v. 1.6	37279	43	2280064	174	103616988	543, 1, KK705997:21022-22108	plot merNub1
280	2013	mesAur1	GCF_000349665.1	allpaths v. R44683	254929	34	11386675	3099	1465851012	529, 2, KB708261:1360324-1361383	plot mesAur1
281	2014	mesUni1	GCF_000695765.1	SOAPdenovo v. 1.6	52863	36	2585696	257	120590969	271, 1, JJRI01098248:16372-16914	plot mesUni1
282	2008	micMur0	tbd	tbd	336993	36	18263201	3493	1863320468	302, 1, scaffold_11535:27481-28085	plot micMur0
283	2008	micMur1	GCA_000165445.1	tbd	318135	36	16408745	3194	1669326577	302, 1, scaffold_11535:27481-28085	plot micMur1
284	2015	micMur2	GCF_000165445.1	AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9	1102998	38	61135566	7563	8957944918	3388, 3, KQ058422v1:91440-98218	plot micMur2
285	2017	micMur3	GCF_000165445.2	AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9; Lachesis v. shendurelab-LACHESIS-2151de9; BioNano IrysSolve v. 2.1	1168691	38	66907392	7729	9630726519	185, 1, chr5:43933509-43933879	plot micMur3
286	2012	micOch1	GCF_000317375.1	allpaths v. R41985 HAPLOIDIFY=True SPRS_WRITE_SEPS=True	335553	35	15776999	2433	1838809952	278, 1, chrLG5:33413026-33413582	plot micOch1
287	2004	mm5	tbd	tbd	849312	36	40470076	5464	5947046883	499, 1, chr11:108081652-108082650	plot mm5
288	2005	mm6	tbd	tbd	869120	36	40947038	5669	6168390266	499, 1, chr11:108231617-108232615	plot mm6
289	2005	mm7	tbd	tbd	796902	35	37088826	6053	5781640680	499, 1, chr11:108519568-108520566	plot mm7
290	2006	mm8	tbd	tbd	818602	36	37812754	6175	5992918402	499, 1, chr11:108226617-108227615	plot mm8
291	2007	mm9	tbd	tbd	841682	36	38909060	6202	6169636600	499, 1, chr11:108271841-108272839	plot mm9
292	2004	monDom1	tbd	tbd	525840	36	23188534	4462	3384507689	487, 1, scaffold_14964:3383335-3384309	plot monDom1
293	2005	monDom2	tbd	tbd	657192	37	33446092	4132	4182097432	685, 1, scaffold_47:13428470-13429840	plot monDom2
294	2013	musDom2	GCF_000371365.1	AllPathsLG v. September 2012	575203	36	27589830	1941	2513509860	2028, 1, KB856326:64184-68240	plot musDom2
295	2013	musFur1	GCA_000215625.1	ALLPATHS-LG v. R36167	309552	34	12256854	8370	2709245222	446, 1, GL896951:5218180-5219072	plot musFur1
296	2013	myoBra1	GCF_000412655.1	SOAP de novo v. 2.04	508698	38	40839066	1070	2100859228	3719, 1, KE163224:7566116-7573554	plot myoBra1
297	2012	myoDav1	GCF_000327345.1	SOAPdenovo v. 1.06	303669	37	20701160	2186	1562115676	595, 1, KB109238:3742816-3744006	plot myoDav1
298	2008	myoLuc1	tbd	tbd	252160	38	14746446	2605	1175238045	253, 1, scaffold_116983:3336-3842	plot myoLuc1
299	2010	myoLuc2	GCF_000147115.1	Arachne v. Dev. Jan 2010	404463	36	18255536	5420	2827568613	312, 1, GL430179:150290-150914	plot myoLuc2
300	2014	nanGal1	GCF_000622305.1	SOAPdenovo v. 2.04.4	592600	35	27666364	3120.5	3348487653	767, 1, KL200570:476406-477940	plot nanGal1
301	2015	nanPar1	GCA_000935625.1	SOAPdenovo v. 1.06	725822	37	53289164	248	1815148366	7565, 1, KN905954v1:74233-89363	plot nanPar1
302	2014	nasLar1	GCA_000772465.1	phredPhrap v. 1.080812	285793	33	32688451	5276	1979226063	5956, 2, chrX:51509450-51521363	plot nasLar1
303	2015	necAme1	GCF_000507365.1	Newbler v. MapAsmResearch-04/19/2010-patch-08/17/2010	30870	43	1735538	1580	123448969	93, 1, KI659398v1:132-318	plot necAme1
304	2008	nemVec1	tbd	tbd	540729	40	30645450	589	1501673463	353, 1, scaffold_201:423580-424286	plot nemVec1
305	2011	neoBri1	GCF_000239395.1	ALLPATHS-LG v. R36800	62939	46	6697998	1655	274117853	8242, 20, JH422273:8382583-8399086	plot neoBri1
306	2014	nipNip1	GCF_000708225.1	SOAPdenovo v. 1.6	32623	43	3676893	251	104452416	1496, 1, KL409846:432608-435600	plot nipNip1
307	2010	nomLeu1	tbd	tbd	1639556	35	79542014	2770	8727221218	427, 1, GL397370:1321325-1322179	plot nomLeu1
308	2011	nomLeu2	tbd	tbd	1639556	35	79542014	2770	8727221218	427, 1, GL397370:1321325-1322179	plot nomLeu2
309	2013	nomLeu3	GCA_000146795.3	tbd	1641886	35	79644778	2776	8748833073	427, 1, chr17:28153188-28154042	plot nomLeu3
310	2014	notCor1	GCF_000735185.1	Celera Assembler v. 7.0	164483	34	7109993	199	393266432	407, 1, KL665414:596304-597118	plot notCor1
311	2008	ochPri0	tbd	tbd	1112332	39	56228146	978	3230892899	340, 1, scaffold_108746:3869-4549	plot ochPri0
312	2008	ochPri2	GCA_000164825.1	tbd	1097898	39	53341188	967	3107510489	340, 1, scaffold_108746:3869-4549	plot ochPri2
313	2013	ochPri3	GCF_000292845.1	Allpaths v. R41206	269479	35	14417226	6664	2042363947	5916, 11, JH802070:23930294-23942136	plot ochPri3
314	2012	octDeg1	GCF_000260255.1	allpaths v. R40507 LITTLE_HELPS_BIG=False	313028	34	17153597	6219	2321422433	538, 1, JH651588:2148235-2149311	plot octDeg1
315	2013	odoRosDiv1	GCA_000321225.1	AllPaths v. 41070; Atlas-link v. 1.0; Atlas-gapfill v. 2.2	386270	34	17141224	7248	3092233269	336, 1, KB228946:1914846-1915518	plot odoRosDiv1
316	2015	oncVol1	GCA_000499405.1	tbd	5247	39	423838	2124	28089581	739, 1, HG738137v1:12037947-12039425	plot oncVol1
317	2014	opiHoa1	GCF_000692075.1	SOAPdenovo v. 1.6	75782	40	6783674	4083	456471575	1119, 1, KK734928:246587-248825	plot opiHoa1
318	2013	orcOrc1	GCF_000331955.2	AllPaths v. 41070; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2	355274	35	15657594	8151	3040130649	4550, 14, NW_004438537v1:3574224-3583337	plot orcOrc1
319	2011	oreNil1	tbd	tbd	80799	39	4892346	6067	586359236	9755, 32, GL831139:3510855-3530396	plot oreNil1
320	2006	ornAna1	GCF_000002275.2	tbd	843770	36	52838231	2857	4750437899	279, 1, Contig10711:4568-5126	plot ornAna1
321	2015	ornAna2	GCA_000002275.2	tbd	843770	36	52838231	2857	4750437899	279, 1, chrUn_DS187984v1:4568-5126	plot ornAna2
322	2012	oryAfe1	GCF_000298275.1	allpaths v. R40776 LITTLE_HELPS_BIG=False	723185	34	29823049	7910	6135084152	201, 1, JH863815:9524393-9524795	plot oryAfe1
323	2005	oryCun1	tbd	tbd	537127	36	23715000	1631	1966576432	355, 1, scaffold_215240:74823-75533	plot oryCun1
324	2009	oryCun2	GCF_000003625.3	tbd	1022805	35	43458140	7982	8671655620	355, 1, chrX:61423000-61423710	plot oryCun2
325	2006	oryLat1	tbd	tbd	191645	40	12487530	1210	620191379	379, 1, chr9:5041681-5042439	plot oryLat1
326	2008	oryLat2	tbd	tbd	189087	40	12356700	1234	592910738	379, 1, chr9:5041681-5042439	plot oryLat2
327	2006	otoGar1	tbd	tbd	292341	35	13393058	3169	1564679906	371, 1, scaffold_95742.1-347136:293478-294220	plot otoGar1
328	2012	otoGar3	GCF_000181295.1	ALLPATHS-LG v. R35710	400962	34	16217113	5408	2796782144	7275, 20, GL873525:45030822-45045391	plot otoGar3
329	2010	oviAri1	GCA_000005525.1	tbd	14042	49	1013366	214	36573585	264, 1, chr15:8985870-8986398	plot oviAri1
330	2012	oviAri3	GCF_000298735.1	SOAPdenovo v. 1.03	786369	35	35783861	7004	6099422199	7782, 1, chr21:31441666-31457230	plot oviAri3
331	2013	panHod1	GCF_000400835.1	SOAPdenovo v. 2.1	521516	35	25591307	8191	4466818919	3120, 1, KE108970:1986445-1992685	plot panHod1
332	2012	panPan1	GCF_000258655.1	Celera Assembler v. 5.4.3	729531	33	27020738	7453	5965856446	156, 1, JH650446:7527934-7528246	plot panPan1
333	2015	panPan2	tbd	tbd	729770	33	27054170	7450	5967745842	167, 1, chr19:49401130-49401464	plot panPan2
334	2015	panRed1	GCA_000341325.1	Velvet v. 1.2.07	23300	42	1084666	1396	66559726	101, 1, KB454925:8492-8694	plot panRed1
335	2013	panTig1	GCF_000464555.1	SOAPdenovo v. 08-Jul-2011	289892	33	13318045	7625	2368098055	1135, 1, KE721593:7259595-7261865	plot panTig1
336	2003	panTro1	tbd	tbd	808650	33	35210172	5887	5843608490	200, 1, chr2:110339092-110339492	plot panTro1
337	2006	panTro2	tbd	tbd	1419819	34	76071535	4272	9139837465	200, 1, chr3:111771142-111771542	plot panTro2
338	2011	panTro3	tbd	tbd	1305469	34	60933587	4651	8652075091	15941, 16, chrX:43654981-43686878	plot panTro3
339	2012	panTro4	GCF_000001515.6	tbd	1307554	34	61009117	4652	8665203604	15941, 16, chrX:43654981-43686878	plot panTro4
340	2016	panTro5	GCF_000001515.7	DiscoVar v. 51280; PBJelly v. 14.9.9	1978942	33	77724028	3609	11734910613	4127, 10, chr7_NW_015973370v1_random:285172-293435	plot panTro5
341	2012	papAnu2	GCF_000264685.1	CABOG v. 6.1; ATLAS-LINK v. 1.0; ATLAS-GAPFILL v. 2.0	1940392	35	82607067	1823	9407152119	616, 1, chr11:83077338-83078570	plot papAnu2
342	2009	papHam1	tbd	tbd	660912	34	27747172	3309	3807206084	342, 1, Contig28428:39-723	plot papHam1
343	2014	pelCri1	GCF_000687375.1	SOAPdenovo v. 1.6	42891	37	2053042	265	127612523	574, 1, KK474798:35527-36675	plot pelCri1
344	2012	pelSin1	GCF_000230535.1	SOAPdenovo v. 1.05	282804	42	32017871	2114.5	1334725849	4166, 1, JH210925:2745573-2753905	plot pelSin1
345	2013	perManBai1	GCF_000500345.1	Newbler v. 2.3 and 2.5; AllPaths v. 41070; ATLAS-gapfill v. 2.2; ATLAS-link v. 1.0	806105	37	49741488	3501	4676973953	266, 1, KI615341:3157564-3158096	plot perManBai1
346	2008	petMar1	tbd	tbd	855653	36	38339527	201	932728649	362, 1, Contig99174:237-961	plot petMar1
347	2012	petMar2	GCA_000148955.1	Arachne v. 3.2	836219	37	38092404	692	2324558773	363, 1, GL498477:1987-2713	plot petMar2
348	2014	phaCar1	GCF_000708925.1	SOAPdenovo v. 1.6	41541	34	1992939	36	26355615	779, 1, KL418261:30029-31587	plot phaCar1
349	2014	phaLep1	GCF_000687285.1	SOAPdenovo v. 1.6	26611	38	1718609	216	85779441	1077, 1, KK455387:47187-49341	plot phaLep1
350	2014	phoRub1	GCA_000687265.1	SOAPdenovo v. 1.6	17140	43	1055248	135	39934970	526, 1, KK424259:7588-8640	plot phoRub1
351	2013	phyCat1	GCF_000472045.1	AllPaths-LG v. January 2013	261153	35	10801080	8197	2241115729	5565, 1, KI411098:797892-809022	plot phyCat1
352	2014	picPub1	GCF_000699005.1	SOAPdenovo v. 1.6	397798	36	17968999	7796	3299119050	4915, 3, KL215520:252741-262573	plot picPub1
353	2013	poeFor1	GCF_000485575.1	AllPaths-LG v. July 2013	161806	52	28441594	4650	990605574	1886, 1, KI520679:7484-11256	plot poeFor1
354	2014	poeRet1	tbd	tbd	71291	38	4816409	1511	343849361	8790, 4, chrLG5:27506035-27523618	plot poeRet1
355	2007	ponAbe1	tbd	tbd	1548515	36	94658376	3928	8754202217	285, 1, Contig811:16977-17547	plot ponAbe1
356	2007	ponAbe2	tbd	tbd	1795710	36	115800456	4659	11283067110	769, 1, chr11:46659515-46661053	plot ponAbe2
357	2015	priExs1	tbd	tbd	33878	44	2639333	1128	98936342	1626, 1, scaffold830:51430-54682	plot priExs1
358	2007	priPac1	tbd	tbd	29257	43	1929264	448	80615899	500, 1, chrUn:71534792-71535792	plot priPac1
359	2010	priPac2	GCA_000180635.1	tbd	19318	39	1050200	259	25863820	500, 1, ABKE01002096:3239-4239	plot priPac2
360	2011	priPac3	tbd	tbd	36759	40	2176431	321	82136541	500, 1, Ppa_Contig5:941324-942324	plot priPac3
361	2008	proCap1	GCA_000152225.1	Arachne v. before 2009	202788	38	11309171	935	440411229	254, 1, scaffold_6350:37640-38148	plot proCap1
362	2013	pseHum1	GCF_000331425.1	SOAPdenovo v. 1.5	140033	36	7836448	130	200423267	7517, 10, KB221191:4083820-4098863	plot pseHum1
363	2012	pteAle1	GCA_000325575.1	SOAPdenovo v. 1.06	114693	37	9365161	223	316324647	1333, 1, KB031158:55901168-55903834	plot pteAle1
364	2014	pteGut1	GCF_000699245.1	SOAPdenovo v. 1.6	41594	36	2007893	100	106772284	534, 1, JMFR01060883:1891-2959	plot pteGut1
365	2013	ptePar1	GCA_000465405.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	21621	32	935645	268	31185376	1327, 6, AWGZ01430664:1-2660	plot ptePar1
366	2008	pteVam1	GCA_000151845.1	tbd	266592	43	16837304	1547	867093676	194, 1, scaffold_275:208852-209240	plot pteVam1
367	2011	punNye1	GCF_000239375.1	ALLPATHS-LG v. R37016	36249	38	2385815	3630	214952201	5131, 20, JH419262:1608400-1618681	plot punNye1
368	2014	pygAde1	GCA_000699105.1	SOAPdenovo v. 1.6	38534	46	4145677	2165.5	202245057	2147, 1, KL225502:93242-97536	plot pygAde1
369	2013	pytBiv1	GCF_000186305.1	Soap deNovo v. March 2012	167510	47	14323626	217	396468667	235, 1, KE953144:259222-259692	plot pytBiv1
370	2012	repBase0	tbd	tbd	54	39	2426	81.5	7619	70, 1, MER51A:232-372	plot repBase0
371	2012	repBase1	tbd	tbd	73	39	3249	77	9691	70, 1, MER51A:232-372	plot repBase1
372	2012	repBase2	tbd	tbd	51	40	2203	79	6907	70, 1, MER51A:232-372	plot repBase2
374	2005	rheMac1	tbd	tbd	674143	34	28294758	3903	4022554742	166, 1, SCAFFOLD105044:90895-91227	plot rheMac1
375	2011	rheMac3	GCA_000230795.1	SOAPdenovo v. 1.0	622607	33	29001646	6165	4578985642	1652, 2, chr7:163447756-163451061	plot rheMac3
376	2016	rheMac8	GCF_000772875.2	MaSuRCA v. 1.8.3; PBJelly2 v. 14.9.9	2975590	37	130558718	652	9828434554	342, 1, chrUn_NW_014851878v1:101-785	plot rheMac8
377	2016	rhiBie1	GCF_001698545.1	Newbler v. 71; Anytag v. 70; GOBOND v. 69; GapCloser v. 1.12	867906	34	52086102	5459	6210031772	1941, 1, NW_016810765v1:2055509-2059391	plot rhiBie1
378	2013	rhiFer1	GCA_000465495.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	30159	33	1238560	174	41741562	172, 1, AWHA01239258:1699-2043	plot rhiFer1
379	2014	rhiRox1	GCF_000769185.1	SOAPdenovo v. 2013.04	1068178	34	49472774	6393	8021193204	11652, 1, KN294251v1:31824-55128	plot rhiRox1
380	2013	ricCom1	GCF_000151685.1	tbd	430308	35	18638247	2948	2156357980	460, 1, EQ974418:17730-18650	plot ricCom1
381	2003	rn3	tbd	tbd	1202899	39	66661811	5386	8488809019	230, 1, chr1:37917795-37918255	plot rn3
382	2006	rn4	tbd	tbd	1201940	39	66433547	5409	8492561356	230, 1, chr1:37914850-37915310	plot rn4
383	2016	rouAeg1	GCF_001466805.2	SparseAssembler v. OCTOBER-2015; DBG2OLC v. OCTOBER-2015; LINKS v. 1.5.1; L_RNA_Scaffolder v. OCTOBER-2015; SSPACE v. 3.0	74090	36	4591683	5517	522939887	410, 2, NW_015493119v1:122550-123371	plot rouAeg1
384	2003	sacCer1	tbd	tbd	666	45	76615	1914.5	2711249	50, 1, chr7:519107-519207	plot sacCer1
385	2009	sacCer2	tbd	tbd	669	45	76812	1868	2711600	71, 1, chrX:120898-121040	plot sacCer2
386	2011	sacCer3	GCF_000146045.2	tbd	669	45	78716	1868	2711582	1988, 10, chrVIII:212266-216251	plot sacCer3
387	2012	saiBol1	GCA_000235385.1	AllPaths v. R37830	526235	34	21114308	7999	4457057956	278, 1, JH378108:18778847-18779403	plot saiBol1
388	2017	salMan0	tbd	tbd	13868435	37	686719420	1377	51891830179	517, 1, contig132009:61305-62339	plot salMan0
389	2012	sarHar1	GCF_000189315.1	Phusion2 v. 1.0	351216	36	19186514	1000	1396676918	169, 1, chrX_GL868371_random:2134-2472	plot sarHar1
390	2013	sebNig1	GCA_000475235.1	tbd	344468	43	18020844	94	249080272	492, 1, AUPR01114153:357-1341	plot sebNig1
391	2013	sebRub1	GCA_000475215.1	SOAPdenovo v. 1.05	299208	38	14417679	139	352997550	408, 1, KI445670:61530-62346	plot sebRub1
392	2014	serCan1	GCF_000534875.1	tbd	201507	36	9350381	157	357279352	3222, 1, HG009216:7215262-7221706	plot serCan1
393	2007	sorAra1	tbd	tbd	182775	34	8309825	1696	783418280	167, 1, scaffold_138113:4547-4881	plot sorAra1
394	2013	sorAra2	GCF_000181275.1	Allpaths v. R41070	410333	34	17425137	5940	2962830748	236, 1, JH798205:592464-592936	plot sorAra2
395	2008	speTri1	tbd	tbd	944802	38	42518738	1017	2492700168	349, 1, scaffold_160520:112228-112926	plot speTri1
396	2012	speTri2	GCF_000236235.1	ALLPATHS v. R37591	213421	34	10318652	2662	1156742500	204, 1, JH393366:4794989-4795397	plot speTri2
397	2014	stePar1	GCF_000690725.1	ALLPATHS-LG v. August 2013	96483	40	8151514	3673	549500672	2624, 1, KK581067:134955-140203	plot stePar1
398	2013	strCam0	tbd	tbd	23662	45	2730974	666	94888209	1134, 1, superscaffold9:6014874-6017142	plot strCam0
399	2014	strCam1	GCF_000698965.1	SOAPdenovo v. 1.6	23599	45	2718563	646	93976596	1134, 1, KL206988:717376-719644	plot strCam1
400	2005	strPur1	tbd	tbd	658932	40	35574440	847.5	1824767726	956, 1, Scaffold18311:2619-4531	plot strPur1
401	2007	strPur2	tbd	tbd	611722	39	30968979	1453	2323533345	956, 1, Scaffold47464:201872-203784	plot strPur2
402	2010	strPur3	tbd	tbd	689739	40	35781206	1763	2733632009	956, 1, Scaffold85:237230-239142	plot strPur3
403	2011	strPur4	GCF_000002235.3	Atlas v. WGS for Sanger Assembly, Atlas-Link and Atlas-GapFill for SOLiD and Illumina improvement	888256	42	54558021	2360	3918297070	956, 1, Scaffold382:244159-246071	plot strPur4
404	2015	strRat1	tbd	tbd	9910	40	540468	1077	26058414	113, 1, RATTI_contig_57682:4110-4336	plot strRat1
405	2015	strRat2	GCA_001040885.1	tbd	8546	41	482721	2233	37502032	67, 1, chrUn_LN609483v1:243-377	plot strRat2
407	2008	taeGut0	tbd	tbd	597003	49	43955858	3833	2936709220	209, 1, Contig47:5328655-5329073	plot taeGut0
408	2008	taeGut1	tbd	tbd	602657	49	44658308	3557	2849213000	209, 1, chrZ:28813941-28814359	plot taeGut1
409	2013	taeGut2	GCF_000151805.1	PCAP v. 2008	602028	49	44591081	3541	2830875406	209, 1, chrZ:28813941-28814359	plot taeGut2
411	2013	takFla1	GCA_000400755.1	HAPs v. 0.2.2	97724	36	6776388	184	251435705	503, 1, KE121297:329-1335	plot takFla1
412	2014	tarIhg38	tbd	tbd	1356771	34	52620956	7485	11152715153	225, 1, chr13:79957499-79957949	plot tarIhg38
413	2008	tarSyr1	tbd	tbd	331855	34	14787267	2876	1459380714	448, 1, scaffold_66218:7702-8598	plot tarSyr1
414	2014	tarSyr2	GCF_000164805.1	Celera v. DEC-2012	1116806	34	43244623	7232	9159997506	448, 1, KE938007v1:127466-128362	plot tarSyr2
415	2014	tauEry1	GCF_000709365.1	SOAPdenovo v. 1.6	58294	35	2621924	2194	291694166	227, 1, JNOY01082112:3268-3722	plot tauEry1
416	2002	tetNig1	tbd	tbd	132260	38	9178877	3055	661840431	413, 1, chrUn_random:43732955-43733781	plot tetNig1
417	2009	tetNig2	tbd	tbd	130250	38	9072570	3013	657839855	413, 1, chrUn_random:35610230-35611056	plot tetNig2
418	2014	tinGut1	GCF_000705375.1	SOAPdenovo v. 1.6	43221	38	2742653	279	110109614	416, 1, KL400833:106660-107492	plot tinGut1
419	2014	tinGut2	GCF_000705375.1	SOAPdenovo v. 1.6	43210	38	2741340	279	110101482	416, 1, KL895505:106660-107492	plot tinGut2
420	2005	triCas1	tbd	tbd	78796	41	4117576	794	170185880	307, 1, Reptig797:115-729	plot triCas1
421	2005	triCas2	tbd	tbd	77889	41	4122780	885	196279053	192, 1, singleUn_1374:29986-30370	plot triCas2
422	2012	triMan1	GCF_000243295.1	AllPaths v. R38542	244060	35	10697421	6090	1795040829	288, 1, JH594632:5261920-5262496	plot triMan1
423	2015	triSpi1	GCF_000181795.1	PCAP v. January 12, 2007	11343	54	1176023	4572	74727382	98, 1, GL622792v1:5540185-5540381	plot triSpi1
424	2015	triSui1	GCA_000701005.1	SOAPdenovo v. 2	17372	45	1593967	2042.5	75416120	501, 1, KL363185v1:221782-222784	plot triSui1
425	2006	tupBel1	tbd	tbd	598738	38	30146267	3026	2905815098	357, 1, scaffold_113598.1-49138:9741-10455	plot tupBel1
426	2013	tupChi1	GCF_000334495.1	SOAPdenovo v. 1.05	803568	36	91543570	4569	5345749214	3940, 1, KB320811:857808-865688	plot tupChi1
427	2008	turTru1	tbd	tbd	563956	39	29728359	4334	3598266237	726, 1, scaffold_99142:224631-226083	plot turTru1
428	2012	turTru2	GCF_000151865.2	Atlas, Atlas-Link, Atlas-GapFill v. June 2011	776833	45	45568301	691	2466469760	652, 1, JH474081:172050-173354	plot turTru2
429	2014	tytAlb1	GCF_000687205.1	SOAPdenovo v. 1.6	15140	33	776246	81	23744286	199, 1, JJRD01024771:5513-5911	plot tytAlb1
430	2014	ursMar1	GCF_000687225.1	SOAPdenovo v. 1.05	311409	35	14157428	7601	2530787255	5007, 6, KK498603:22100903-22110922	plot ursMar1
431	2007	venter1	tbd	tbd	930808	33	34824482	7414	7568565462	475, 1, chr14:54149213-54150163	plot venter1
432	2008	vicPac1	tbd	tbd	625540	40	38229197	637	730415397	248, 1, scaffold_134438:933-1429	plot vicPac1
433	2013	vicPac2	GCF_000164845.1	Newbler v. May-2012	171221	45	11863115	873	480695662	170, 1, KB632444:13257033-13257373	plot vicPac2
434	2008	vicVic1	tbd	tbd	625651	40	38233620	637	731143924	248, 1, scaffold_134439:933-1429	plot vicVic1
435	2017	xenLae2	GCF_001663975.1	Meraculous v. May-2013	691039	37	29820985	793	3038879681	643, 2, chr4L:85154781-85156068	plot xenLae2
436	2004	xenTro1	tbd	tbd	1073717	40	65548900	216	2854287515	347, 1, scaffold_3418:6326-7020	plot xenTro1
437	2006	xenTro2	tbd	tbd	1034566	40	64677537	219	2820134241	548, 1, scaffold_68:2539823-2540919	plot xenTro2
438	2011	xenTro3	tbd	tbd	1034357	40	64662644	219	2819484140	548, 1, GL172704:2539823-2540919	plot xenTro3
439	2013	xenTro7	GCF_000004195.2	ARACHNE v. 20071016_modified	1100470	39	53428011	229	2808691507	3560, 2, KB021656:75384527-75391648	plot xenTro7
440	2016	xenTro9	GCF_000004195.3	Meraculous v. May-2013	967829	39	47452193	241	2585384269	3560, 2, chr6:35780447-35787568	plot xenTro9
441	2013	xipMac1	GCF_000241075.1	PCAP v. 3/30/09; Newbler v. MapAsmResearch-02/17/2010	39708	35	1764516	506	136874274	119, 1, JH557910:3615-3853	plot xipMac1
443	2013	zonAlb1	GCF_000385455.1	Allpaths-LG v. Feb-2013	220251	35	9228906	369	407868591	2060, 1, KB913045:8123897-8128017	plot zonAlb1

assemblies with zero duplicate gap sequences

count	year	dbName	ncbiAsmId	assembly size	assembly method
001	2014	bunEbo1	GCF_000889155.1	18940	tbd
002	2014	eboVir1	tbd	870153	tbd
003	2014	eboVir3	tbd	18957	tbd
004	2002	hpv1	GCF_000862685.1	8033	tbd
005	2014	marVir1	tbd	38225	tbd
006	2014	resEbo1	GCF_000854085.1	18891	tbd
007	2014	sudEbo1	GCF_000855585.1	18875	tbd
008	2014	taiEbo1	GCF_000888475.1	18935	tbd
009	2014	zaiEbo1	GCF_000848505.1	18959	tbd

TandemDups: Difference between revisions

Revision as of 16:53, 24 May 2017

Contents

methods

table features

tandemDups table statistics

assemblies with zero duplicate gap sequences

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@@ Line 1: / Line 1: @@
-\== methods ==
+== methods ==
 These are measurements of identical paired sequences with a
 separation between the pairs of at least one nucleotide.
@@ Line 42: / Line 42: @@
 The 'year' is what we have in the dbDb table as indicated from the
 assembly information files for the date of the assembly.  A few have
-estimated dates, and do not have database genome browsers.
+estimaged dates, and do not have database genome browsers.
 The example item is a worst case example, where the ratio of dup
 sequence size to gap size is the highest, i.e. smallest gap with largest dup size
@@ Line 71: / Line 71: @@
 |-
 | 001
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=WSB_EiJ WSB_EiJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624835.1/ GCA_001624835.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
+| style='text-align:right'| 368254
+| style='text-align:right'| 34
+| style='text-align:right'| 19384243
+| &nbsp;
+| style='text-align:right'| 3183
+| style='text-align:right'| 2181662749
+| 1289,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=WSB_EiJ&position=chr9:85913016-85915594 chr9:85913016-85915594]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624835.1_WSB_EiJ_v1 plot GCA_001624835.1_WSB_EiJ_v1]
+|-
+| 002
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=A_J A_J]
@@ Line 84: / Line 98: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624215.1_A_J_v1 plot GCA_001624215.1_A_J_v1]
 |-
-| 002
+| 003
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CBA_J CBA_J]
@@ Line 98: / Line 112: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624475.1_CBA_J_v1 plot GCA_001624475.1_CBA_J_v1]
 |-
-| 003
+| 004
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAROLI_EIJ CAROLI_EIJ]
@@ Line 112: / Line 126: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_900094665.1_CAROLI_EIJ_v1 plot GCA_900094665.1_CAROLI_EIJ_v1]
 |-
-| 004
+| 005
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=LP_J LP_J]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632615.1/ GCA_001632615.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
+| style='text-align:right'| 405473
+| style='text-align:right'| 34
+| style='text-align:right'| 23153810
+| &nbsp;
+| style='text-align:right'| 2996
+| style='text-align:right'| 2347243646
+| 1231,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=LP_J&position=chr19:15003741-15006203 chr19:15003741-15006203]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001632615.1_LP_J_v1 plot GCA_001632615.1_LP_J_v1]
+|-
+| 006
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=BALB_cJ BALB_cJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632525.1/ GCA_001632525.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
+| style='text-align:right'| 453227
+| style='text-align:right'| 34
+| style='text-align:right'| 28546282
+| &nbsp;
+| style='text-align:right'| 3208
+| style='text-align:right'| 2659711418
+| 1726,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=BALB_cJ&position=chr6:125567161-125570613 chr6:125567161-125570613]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001632525.1_BALB_cJ_v1 plot GCA_001632525.1_BALB_cJ_v1]
+|-
+| 007
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PAHARI_EIJ PAHARI_EIJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_900095145.1/ GCA_900095145.1]
+| tbd
+| style='text-align:right'| 432765
+| style='text-align:right'| 33
+| style='text-align:right'| 17591114
+| &nbsp;
+| style='text-align:right'| 4877
+| style='text-align:right'| 2885483004
+| 2085,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PAHARI_EIJ&position=chr7:37074720-37078890 chr7:37074720-37078890]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_900095145.1_PAHARI_EIJ_v1 plot GCA_900095145.1_PAHARI_EIJ_v1]
+|-
+| 008
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PWK_PhJ PWK_PhJ]
@@ Line 126: / Line 182: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624775.1_PWK_PhJ_v1 plot GCA_001624775.1_PWK_PhJ_v1]
 |-
-| 005
+| 009
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=DBA_2J DBA_2J]
@@ Line 140: / Line 196: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624505.1_DBA_2J_v1 plot GCA_001624505.1_DBA_2J_v1]
 |-
-| 006
+| 010
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NOD_ShiLtJ NOD_ShiLtJ]
@@ Line 154: / Line 210: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624675.1_NOD_ShiLtJ_v1 plot GCA_001624675.1_NOD_ShiLtJ_v1]
 |-
-| 007
+| 011
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=SPRET_EiJ SPRET_EiJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624865.1/ GCA_001624865.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail genomics v. August-2015; Ragout v. 2.0b
+| style='text-align:right'| 457522
+| style='text-align:right'| 34
+| style='text-align:right'| 33139291
+| &nbsp;
+| style='text-align:right'| 2707
+| style='text-align:right'| 2586459484
+| 2050,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=SPRET_EiJ&position=chr14:83734846-83738946 chr14:83734846-83738946]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624865.1_SPRET_EiJ_v1 plot GCA_001624865.1_SPRET_EiJ_v1]
+|-
+| 012
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NZO_HlLtJ NZO_HlLtJ]
@@ Line 168: / Line 238: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624745.1_NZO_HlLtJ_v1 plot GCA_001624745.1_NZO_HlLtJ_v1]
 |-
-| 008
+| 013
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=129S1_SvImJ 129S1_SvImJ]
@@ Line 182: / Line 252: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624185.1_129S1_SvImJ_v1 plot GCA_001624185.1_129S1_SvImJ_v1]
 |-
-| 009
+| 014
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C57BL_6NJ C57BL_6NJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632555.1/ GCA_001632555.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
+| style='text-align:right'| 429023
+| style='text-align:right'| 34
+| style='text-align:right'| 25052791
+| &nbsp;
+| style='text-align:right'| 2909
+| style='text-align:right'| 2447640962
+| 1140,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C57BL_6NJ&position=chr7:119230972-119233252 chr7:119230972-119233252]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001632555.1_C57BL_6NJ_v1 plot GCA_001632555.1_C57BL_6NJ_v1]
+|-
+| 015
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=AKR_J AKR_J]
@@ Line 196: / Line 280: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624295.1_AKR_J_v1 plot GCA_001624295.1_AKR_J_v1]
 |-
-| 010
+| 016
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAST_EiJ CAST_EiJ]
@@ Line 210: / Line 294: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001624445.1_CAST_EiJ_v1 plot GCA_001624445.1_CAST_EiJ_v1]
 |-
-| 011
+| 017
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C3H_HeJ C3H_HeJ]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632575.1/ GCA_001632575.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
+| style='text-align:right'| 427662
+| style='text-align:right'| 34
+| style='text-align:right'| 25752170
+| &nbsp;
+| style='text-align:right'| 2957
+| style='text-align:right'| 2474866264
+| 1490,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C3H_HeJ&position=chr3:96904048-96907028 chr3:96904048-96907028]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=GCA_001632575.1_C3H_HeJ_v1 plot GCA_001632575.1_C3H_HeJ_v1]
+|-
+| 018
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=FVB_NJ FVB_NJ]
@@ Line 235: / Line 333: @@
 | style='text-align:right'| 7363
 | style='text-align:right'| 7996145625
-| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1&tanDups=pack&position=chr13:80499180-80499630 chr13:80499180-80499630]
+| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1&tanDups=pack&gap=dense&position=chr13:80499180-80499630 chr13:80499180-80499630]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=CHM1 plot CHM1]
 |-
@@ Line 249: / Line 347: @@
 | style='text-align:right'| 479
 | style='text-align:right'| 270396956
-| 448,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1&tanDups=pack&position=KK830956:17007-17903 KK830956:17007-17903]
+| 448,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1&tanDups=pack&gap=dense&position=KK830956:17007-17903 KK830956:17007-17903]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=acaChl1 plot acaChl1]
 |-
@@ Line 263: / Line 361: @@
 | style='text-align:right'| 1165
 | style='text-align:right'| 777735
-| 35,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aciBauTYTH_1&tanDups=pack&position=chr_CP003856:2714351-2714421 chr_CP003856:2714351-2714421]
+| 35,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aciBauTYTH_1&tanDups=pack&gap=dense&position=chr_CP003856:2714351-2714421 chr_CP003856:2714351-2714421]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aciBauTYTH_1 plot aciBauTYTH_1]
 |-
@@ Line 277: / Line 375: @@
 | style='text-align:right'| 1833
 | style='text-align:right'| 319093167
-| 126,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=afrOth13&tanDups=pack&position=3-3:1498405-1498657 3-3:1498405-1498657]
+| 126,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=afrOth13&tanDups=pack&gap=dense&position=3-3:1498405-1498657 3-3:1498405-1498657]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=afrOth13 plot afrOth13]
 |-
@@ Line 291: / Line 389: @@
 | style='text-align:right'| 7914
 | style='text-align:right'| 2120476903
-| 1357,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1&tanDups=pack&position=GL194066.1:206322-209037 GL194066.1:206322-209037]
+| 1357,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1&tanDups=pack&gap=dense&position=GL194066.1:206322-209037 GL194066.1:206322-209037]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ailMel1 plot ailMel1]
 |-
@@ Line 305: / Line 403: @@
 | style='text-align:right'| 2629
 | style='text-align:right'| 379690780
-| 2771,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1&tanDups=pack&position=JH736852:249449-254991 JH736852:249449-254991]
+| 2771,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1&tanDups=pack&gap=dense&position=JH736852:249449-254991 JH736852:249449-254991]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=allMis1 plot allMis1]
 |-
@@ Line 319: / Line 417: @@
 | style='text-align:right'| 3510
 | style='text-align:right'| 624671088
-| 5451,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1&tanDups=pack&position=KE696051:101233-112135 KE696051:101233-112135]
+| 5451,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1&tanDups=pack&gap=dense&position=KE696051:101233-112135 KE696051:101233-112135]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=allSin1 plot allSin1]
 |-
@@ Line 333: / Line 431: @@
 | style='text-align:right'| 256
 | style='text-align:right'| 63766115
-| 5218,	14,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1&tanDups=pack&position=KB272082:90533-100982 KB272082:90533-100982]
+| 5218,	14,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1&tanDups=pack&gap=dense&position=KB272082:90533-100982 KB272082:90533-100982]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=amaVit1 plot amaVit1]
 |-
@@ Line 347: / Line 445: @@
 | style='text-align:right'| 401
 | style='text-align:right'| 91882502
-| 1258,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1&tanDups=pack&position=KB745735:2510-5026 KB745735:2510-5026]
+| 1258,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1&tanDups=pack&gap=dense&position=KB745735:2510-5026 KB745735:2510-5026]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=anaPla1 plot anaPla1]
 |-
@@ Line 361: / Line 459: @@
 | style='text-align:right'| 389.5
 | style='text-align:right'| 157542766
-| 4183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1&tanDups=pack&position=JARK01001394v1:846761-855127 JARK01001394v1:846761-855127]
+| 4183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1&tanDups=pack&gap=dense&position=JARK01001394v1:846761-855127 JARK01001394v1:846761-855127]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ancCey1 plot ancCey1]
 |-
@@ Line 375: / Line 473: @@
 | style='text-align:right'| 800
 | style='text-align:right'| 580570188
-| 1181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=angJap1&tanDups=pack&position=KI307522:56201-58563 KI307522:56201-58563]
+| 1181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=angJap1&tanDups=pack&gap=dense&position=KI307522:56201-58563 KI307522:56201-58563]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=angJap1 plot angJap1]
 |-
@@ Line 389: / Line 487: @@
 | style='text-align:right'| 2923
 | style='text-align:right'| 4158391303
-| 351,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar1&tanDups=pack&position=scaffold_31:2142294-2142996 scaffold_31:2142294-2142996]
+| 351,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar1&tanDups=pack&gap=dense&position=scaffold_31:2142294-2142996 scaffold_31:2142294-2142996]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=anoCar1 plot anoCar1]
 |-
@@ Line 403: / Line 501: @@
 | style='text-align:right'| 3201
 | style='text-align:right'| 3874056176
-| 392,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2&tanDups=pack&position=chr4:7395659-7396443 chr4:7395659-7396443]
+| 392,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2&tanDups=pack&gap=dense&position=chr4:7395659-7396443 chr4:7395659-7396443]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=anoCar2 plot anoCar2]
 |-
@@ Line 417: / Line 515: @@
 | style='text-align:right'| 2383
 | style='text-align:right'| 356254048
-| 1175,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoGam1&tanDups=pack&position=chrX:14717656-14720006 chrX:14717656-14720006]
+| 1175,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoGam1&tanDups=pack&gap=dense&position=chrX:14717656-14720006 chrX:14717656-14720006]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=anoGam1 plot anoGam1]
 |-
@@ Line 431: / Line 529: @@
 | style='text-align:right'| 120
 | style='text-align:right'| 236011041
-| 453,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1&tanDups=pack&position=KB928133:814324-815231 KB928133:814324-815231]
+| 453,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1&tanDups=pack&gap=dense&position=KB928133:814324-815231 KB928133:814324-815231]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apaSpi1 plot apaSpi1]
 |-
@@ Line 445: / Line 543: @@
 | style='text-align:right'| 112
 | style='text-align:right'| 56084043
-| 453,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1&tanDups=pack&position=KL385068:59340-60246 KL385068:59340-60246]
+| 453,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1&tanDups=pack&gap=dense&position=KL385068:59340-60246 KL385068:59340-60246]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apaVit1 plot apaVit1]
 |-
@@ Line 459: / Line 557: @@
 | style='text-align:right'| 280
 | style='text-align:right'| 81345069
-| 203,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel1&tanDups=pack&position=GroupUn.6971:896-1302 GroupUn.6971:896-1302]
+| 203,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel1&tanDups=pack&gap=dense&position=GroupUn.6971:896-1302 GroupUn.6971:896-1302]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apiMel1 plot apiMel1]
 |-
@@ Line 473: / Line 571: @@
 | style='text-align:right'| 295
 | style='text-align:right'| 110415978
-| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel2&tanDups=pack&position=Group8:8120781-8121249 Group8:8120781-8121249]
+| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel2&tanDups=pack&gap=dense&position=Group8:8120781-8121249 Group8:8120781-8121249]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apiMel2 plot apiMel2]
 |-
@@ Line 487: / Line 585: @@
 | style='text-align:right'| 318
 | style='text-align:right'| 146199642
-| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel3&tanDups=pack&position=Group8:9788059-9788527 Group8:9788059-9788527]
+| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel3&tanDups=pack&gap=dense&position=Group8:9788059-9788527 Group8:9788059-9788527]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apiMel3 plot apiMel3]
 |-
@@ Line 501: / Line 599: @@
 | style='text-align:right'| 328
 | style='text-align:right'| 182902657
-| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4&tanDups=pack&position=Group8:11123745-11124213 Group8:11123745-11124213]
+| 234,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4&tanDups=pack&gap=dense&position=Group8:11123745-11124213 Group8:11123745-11124213]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=apiMel4 plot apiMel4]
 |-
@@ Line 515: / Line 613: @@
 | style='text-align:right'| 1162
 | style='text-align:right'| 1691576982
-| 254,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aplCal1&tanDups=pack&position=scaffold_486:233208-233716 scaffold_486:233208-233716]
+| 254,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aplCal1&tanDups=pack&gap=dense&position=scaffold_486:233208-233716 scaffold_486:233208-233716]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aplCal1 plot aplCal1]
 |-
@@ Line 529: / Line 627: @@
 | style='text-align:right'| 120
 | style='text-align:right'| 162744750
-| 2370,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1&tanDups=pack&position=KL225745:613720-618460 KL225745:613720-618460]
+| 2370,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1&tanDups=pack&gap=dense&position=KL225745:613720-618460 KL225745:613720-618460]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aptFor1 plot aptFor1]
 |-
@@ Line 543: / Line 641: @@
 | style='text-align:right'| 159
 | style='text-align:right'| 396269019
-| 13772,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptMan1&tanDups=pack&position=NW_013987314v1:1452350-1479894 NW_013987314v1:1452350-1479894]
+| 13772,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptMan1&tanDups=pack&gap=dense&position=NW_013987314v1:1452350-1479894 NW_013987314v1:1452350-1479894]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aptMan1 plot aptMan1]
 |-
@@ Line 557: / Line 655: @@
 | style='text-align:right'| 43
 | style='text-align:right'| 70439237
-| 98,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr1&tanDups=pack&position=KK848043:4630547-4630743 KK848043:4630547-4630743]
+| 98,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr1&tanDups=pack&gap=dense&position=KK848043:4630547-4630743 KK848043:4630547-4630743]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aquChr1 plot aquChr1]
 |-
@@ Line 571: / Line 669: @@
 | style='text-align:right'| 548
 | style='text-align:right'| 117223799
-| 6351,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2&tanDups=pack&position=KN265844v1:264833-277538 KN265844v1:264833-277538]
+| 6351,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2&tanDups=pack&gap=dense&position=KN265844v1:264833-277538 KN265844v1:264833-277538]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=aquChr2 plot aquChr2]
 |-
@@ Line 585: / Line 683: @@
 | style='text-align:right'| 1788
 | style='text-align:right'| 35728109
-| 241,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1&tanDups=pack&position=KE047968:4314-4797 KE047968:4314-4797]
+| 241,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1&tanDups=pack&gap=dense&position=KE047968:4314-4797 KE047968:4314-4797]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=araMac1 plot araMac1]
 |-
@@ Line 599: / Line 697: @@
 | style='text-align:right'| 4141
 | style='text-align:right'| 237921318
-| 415,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araTha1&tanDups=pack&position=chr3:12226092-12226922 chr3:12226092-12226922]
+| 415,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araTha1&tanDups=pack&gap=dense&position=chr3:12226092-12226922 chr3:12226092-12226922]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=araTha1 plot araTha1]
 |-
@@ Line 613: / Line 711: @@
 | style='text-align:right'| 136
 | style='text-align:right'| 30068625
-| 680,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1&tanDups=pack&position=JH878990v1:516922-518282 JH878990v1:516922-518282]
+| 680,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1&tanDups=pack&gap=dense&position=JH878990v1:516922-518282 JH878990v1:516922-518282]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ascSuu1 plot ascSuu1]
 |-
@@ Line 627: / Line 725: @@
 | style='text-align:right'| 344
 | style='text-align:right'| 878056894
-| 647,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1&tanDups=pack&position=KB872443:19678-20972 KB872443:19678-20972]
+| 647,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1&tanDups=pack&gap=dense&position=KB872443:19678-20972 KB872443:19678-20972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=astMex1 plot astMex1]
 |-
@@ Line 641: / Line 739: @@
 | style='text-align:right'| 7511
 | style='text-align:right'| 2584004816
-| 5160,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1&tanDups=pack&position=KI537228:6365-16685 KI537228:6365-16685]
+| 5160,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1&tanDups=pack&gap=dense&position=KI537228:6365-16685 KI537228:6365-16685]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=balAcu1 plot balAcu1]
 |-
@@ Line 655: / Line 753: @@
 | style='text-align:right'| 127
 | style='text-align:right'| 51713556
-| 375,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balPav1&tanDups=pack&position=KL478702:45795-46545 KL478702:45795-46545]
+| 375,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balPav1&tanDups=pack&gap=dense&position=KL478702:45795-46545 KL478702:45795-46545]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=balPav1 plot balPav1]
 |-
@@ Line 669: / Line 767: @@
 | style='text-align:right'| 8700.5
 | style='text-align:right'| 8769740309
-| 338,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1&tanDups=pack&position=KN265095v1:5133899-5134575 KN265095v1:5133899-5134575]
+| 338,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1&tanDups=pack&gap=dense&position=KN265095v1:5133899-5134575 KN265095v1:5133899-5134575]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bisBis1 plot bisBis1]
 |-
@@ Line 683: / Line 781: @@
 | style='text-align:right'| 847
 | style='text-align:right'| 394283618
-| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=borEut13&tanDups=pack&position=chr4:75059497-75059747 chr4:75059497-75059747]
+| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=borEut13&tanDups=pack&gap=dense&position=chr4:75059497-75059747 chr4:75059497-75059747]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=borEut13 plot borEut13]
 |-
@@ Line 697: / Line 795: @@
 | style='text-align:right'| 8148
 | style='text-align:right'| 6401204703
-| 2625,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1&tanDups=pack&position=JH881616:2629253-2634503 JH881616:2629253-2634503]
+| 2625,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1&tanDups=pack&gap=dense&position=JH881616:2629253-2634503 JH881616:2629253-2634503]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosMut1 plot bosMut1]
 |-
@@ Line 711: / Line 809: @@
 | style='text-align:right'| 3236
 | style='text-align:right'| 1418202012
-| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau1&tanDups=pack&position=SCAFFOLD225782:8549-9213 SCAFFOLD225782:8549-9213]
+| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau1&tanDups=pack&gap=dense&position=SCAFFOLD225782:8549-9213 SCAFFOLD225782:8549-9213]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau1 plot bosTau1]
 |-
@@ Line 725: / Line 823: @@
 | style='text-align:right'| 9334
 | style='text-align:right'| 11023049142
-| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau3&tanDups=pack&position=chr5:47411355-47412019 chr5:47411355-47412019]
+| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau3&tanDups=pack&gap=dense&position=chr5:47411355-47412019 chr5:47411355-47412019]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau3 plot bosTau3]
 |-
@@ Line 739: / Line 837: @@
 | style='text-align:right'| 9381
 | style='text-align:right'| 11147570812
-| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau4&tanDups=pack&position=chr5:52417493-52418157 chr5:52417493-52418157]
+| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau4&tanDups=pack&gap=dense&position=chr5:52417493-52418157 chr5:52417493-52418157]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau4 plot bosTau4]
 |-
@@ Line 753: / Line 851: @@
 | style='text-align:right'| 9372
 | style='text-align:right'| 10891150076
-| 474,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau5&tanDups=pack&position=chr1:65205480-65206428 chr1:65205480-65206428]
+| 474,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau5&tanDups=pack&gap=dense&position=chr1:65205480-65206428 chr1:65205480-65206428]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau5 plot bosTau5]
 |-
@@ Line 767: / Line 865: @@
 | style='text-align:right'| 8928
 | style='text-align:right'| 11394478150
-| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6&tanDups=pack&position=chr22:31476636-31478482 chr22:31476636-31478482]
+| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6&tanDups=pack&gap=dense&position=chr22:31476636-31478482 chr22:31476636-31478482]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau6 plot bosTau6]
 |-
@@ Line 781: / Line 879: @@
 | style='text-align:right'| 8876
 | style='text-align:right'| 11556236690
-| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7&tanDups=pack&position=chr5:52215273-52215937 chr5:52215273-52215937]
+| 332,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7&tanDups=pack&gap=dense&position=chr5:52215273-52215937 chr5:52215273-52215937]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau7 plot bosTau7]
 |-
@@ Line 795: / Line 893: @@
 | style='text-align:right'| 8930
 | style='text-align:right'| 11394290218
-| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8&tanDups=pack&position=chr22:31476636-31478482 chr22:31476636-31478482]
+| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8&tanDups=pack&gap=dense&position=chr22:31476636-31478482 chr22:31476636-31478482]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTau8 plot bosTau8]
 |-
@@ Line 809: / Line 907: @@
 | style='text-align:right'| 9197
 | style='text-align:right'| 11353955385
-| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTauMd3&tanDups=pack&position=chr22:31476636-31478482 chr22:31476636-31478482]
+| 923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTauMd3&tanDups=pack&gap=dense&position=chr22:31476636-31478482 chr22:31476636-31478482]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bosTauMd3 plot bosTauMd3]
 |-
@@ Line 823: / Line 921: @@
 | style='text-align:right'| 1088
 | style='text-align:right'| 1244816809
-| 1512,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo2&tanDups=pack&position=Bf_V2_32:3091839-3094863 Bf_V2_32:3091839-3094863]
+| 1512,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo2&tanDups=pack&gap=dense&position=Bf_V2_32:3091839-3094863 Bf_V2_32:3091839-3094863]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=braFlo2 plot braFlo2]
 |-
@@ Line 837: / Line 935: @@
 | style='text-align:right'| 2750
 | style='text-align:right'| 314357742
-| 1288,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braRap1&tanDups=pack&position=chrA5:13328835-13331412 chrA5:13328835-13331412]
+| 1288,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braRap1&tanDups=pack&gap=dense&position=chrA5:13328835-13331412 chrA5:13328835-13331412]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=braRap1 plot braRap1]
 |-
@@ Line 851: / Line 949: @@
 | style='text-align:right'| 264
 | style='text-align:right'| 46555408
-| 321,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal1&tanDups=pack&position=Bmal_supercontigDegenerate10576:240-882 Bmal_supercontigDegenerate10576:240-882]
+| 321,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal1&tanDups=pack&gap=dense&position=Bmal_supercontigDegenerate10576:240-882 Bmal_supercontigDegenerate10576:240-882]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bruMal1 plot bruMal1]
 |-
@@ Line 865: / Line 963: @@
 | style='text-align:right'| 402
 | style='text-align:right'| 111607550
-| 453,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2&tanDups=pack&position=Bmal_v3_scaffold8088:119-1025 Bmal_v3_scaffold8088:119-1025]
+| 453,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2&tanDups=pack&gap=dense&position=Bmal_v3_scaffold8088:119-1025 Bmal_v3_scaffold8088:119-1025]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bruMal2 plot bruMal2]
 |-
@@ Line 879: / Line 977: @@
 | style='text-align:right'| 7913
 | style='text-align:right'| 8291159158
-| 576,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bubBub1&tanDups=pack&position=KI419055:2574813-2575965 KI419055:2574813-2575965]
+| 576,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bubBub1&tanDups=pack&gap=dense&position=KI419055:2574813-2575965 KI419055:2574813-2575965]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bubBub1 plot bubBub1]
 |-
@@ Line 893: / Line 991: @@
 | style='text-align:right'| 73
 | style='text-align:right'| 48672532
-| 715,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1&tanDups=pack&position=KL533494:44624-46054 KL533494:44624-46054]
+| 715,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1&tanDups=pack&gap=dense&position=KL533494:44624-46054 KL533494:44624-46054]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=bucRhi1 plot bucRhi1]
 |-
@@ Line 907: / Line 1,005: @@
 | style='text-align:right'| 1694
 | style='text-align:right'| 51888226
-| 134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1&tanDups=pack&position=scaffold01254:876286-876554 scaffold01254:876286-876554]
+| 134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1&tanDups=pack&gap=dense&position=scaffold01254:876286-876554 scaffold01254:876286-876554]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=burXyl1 plot burXyl1]
 |-
@@ Line 921: / Line 1,019: @@
 | style='text-align:right'| 305
 | style='text-align:right'| 156635287
-| 71,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng1&tanDups=pack&position=scafRNAPATHr22140:12806-12948 scafRNAPATHr22140:12806-12948]
+| 71,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng1&tanDups=pack&gap=dense&position=scafRNAPATHr22140:12806-12948 scafRNAPATHr22140:12806-12948]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeAng1 plot caeAng1]
 |-
@@ Line 935: / Line 1,033: @@
 | style='text-align:right'| 369
 | style='text-align:right'| 202631392
-| 131,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2&tanDups=pack&position=Cang_2012_03_13_00262:54689-54951 Cang_2012_03_13_00262:54689-54951]
+| 131,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2&tanDups=pack&gap=dense&position=Cang_2012_03_13_00262:54689-54951 Cang_2012_03_13_00262:54689-54951]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeAng2 plot caeAng2]
 |-
@@ Line 949: / Line 1,047: @@
 | style='text-align:right'| 669
 | style='text-align:right'| 184995823
-| 179,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap1&tanDups=pack&position=chrUn:91344286-91344644 chrUn:91344286-91344644]
+| 179,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap1&tanDups=pack&gap=dense&position=chrUn:91344286-91344644 chrUn:91344286-91344644]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeJap1 plot caeJap1]
 |-
@@ Line 963: / Line 1,061: @@
 | style='text-align:right'| 1128.5
 | style='text-align:right'| 219090212
-| 153,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2&tanDups=pack&position=chrUn:143662847-143663153 chrUn:143662847-143663153]
+| 153,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2&tanDups=pack&gap=dense&position=chrUn:143662847-143663153 chrUn:143662847-143663153]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeJap2 plot caeJap2]
 |-
@@ Line 977: / Line 1,075: @@
 | style='text-align:right'| 973
 | style='text-align:right'| 192672580
-| 153,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2a&tanDups=pack&position=Cjap_Contig3098:12088-12394 Cjap_Contig3098:12088-12394]
+| 153,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2a&tanDups=pack&gap=dense&position=Cjap_Contig3098:12088-12394 Cjap_Contig3098:12088-12394]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeJap2a plot caeJap2a]
 |-
@@ Line 991: / Line 1,089: @@
 | style='text-align:right'| 360
 | style='text-align:right'| 75708219
-| 176,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap3&tanDups=pack&position=ABLE03028834:844-1196 ABLE03028834:844-1196]
+| 176,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap3&tanDups=pack&gap=dense&position=ABLE03028834:844-1196 ABLE03028834:844-1196]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeJap3 plot caeJap3]
 |-
@@ Line 1,005: / Line 1,103: @@
 | style='text-align:right'| 815
 | style='text-align:right'| 226847582
-| 176,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4&tanDups=pack&position=Scaffold17893:329482-329834 Scaffold17893:329482-329834]
+| 176,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4&tanDups=pack&gap=dense&position=Scaffold17893:329482-329834 Scaffold17893:329482-329834]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeJap4 plot caeJap4]
 |-
@@ Line 1,019: / Line 1,117: @@
 | style='text-align:right'| 2009
 | style='text-align:right'| 281616954
-| 168,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb1&tanDups=pack&position=chrUn:161968878-161969214 chrUn:161968878-161969214]
+| 168,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb1&tanDups=pack&gap=dense&position=chrUn:161968878-161969214 chrUn:161968878-161969214]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caePb1 plot caePb1]
 |-
@@ Line 1,033: / Line 1,131: @@
 | style='text-align:right'| 3788.5
 | style='text-align:right'| 420907669
-| 239,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb2&tanDups=pack&position=chrUn:97561553-97562031 chrUn:97561553-97562031]
+| 239,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb2&tanDups=pack&gap=dense&position=chrUn:97561553-97562031 chrUn:97561553-97562031]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caePb2 plot caePb2]
 |-
@@ Line 1,047: / Line 1,145: @@
 | style='text-align:right'| 3770
 | style='text-align:right'| 420080585
-| 239,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3&tanDups=pack&position=Scfld02_132:346628-347106 Scfld02_132:346628-347106]
+| 239,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3&tanDups=pack&gap=dense&position=Scfld02_132:346628-347106 Scfld02_132:346628-347106]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caePb3 plot caePb3]
 |-
@@ Line 1,061: / Line 1,159: @@
 | style='text-align:right'| 1786
 | style='text-align:right'| 318215569
-| 193,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem1&tanDups=pack&position=SuperCont3184:2552-2938 SuperCont3184:2552-2938]
+| 193,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem1&tanDups=pack&gap=dense&position=SuperCont3184:2552-2938 SuperCont3184:2552-2938]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeRem1 plot caeRem1]
 |-
@@ Line 1,075: / Line 1,173: @@
 | style='text-align:right'| 859
 | style='text-align:right'| 350685995
-| 193,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem2&tanDups=pack&position=chrUn:145434398-145434784 chrUn:145434398-145434784]
+| 193,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem2&tanDups=pack&gap=dense&position=chrUn:145434398-145434784 chrUn:145434398-145434784]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeRem2 plot caeRem2]
 |-
@@ Line 1,089: / Line 1,187: @@
 | style='text-align:right'| 2408
 | style='text-align:right'| 318941600
-| 181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem3&tanDups=pack&position=chrUn:147913992-147914354 chrUn:147913992-147914354]
+| 181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem3&tanDups=pack&gap=dense&position=chrUn:147913992-147914354 chrUn:147913992-147914354]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeRem3 plot caeRem3]
 |-
@@ Line 1,103: / Line 1,201: @@
 | style='text-align:right'| 2320
 | style='text-align:right'| 319257206
-| 181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4&tanDups=pack&position=Crem_Contig169:93478-93840 Crem_Contig169:93478-93840]
+| 181,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4&tanDups=pack&gap=dense&position=Crem_Contig169:93478-93840 Crem_Contig169:93478-93840]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeRem4 plot caeRem4]
 |-
@@ Line 1,117: / Line 1,215: @@
 | style='text-align:right'| 2230.5
 | style='text-align:right'| 70961296
-| 161,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111&tanDups=pack&position=Scaffold630:3047861-3048183 Scaffold630:3047861-3048183]
+| 161,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111&tanDups=pack&gap=dense&position=Scaffold630:3047861-3048183 Scaffold630:3047861-3048183]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeSp111 plot caeSp111]
 |-
@@ Line 1,131: / Line 1,229: @@
 | style='text-align:right'| 1869
 | style='text-align:right'| 57741956
-| 109,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51&tanDups=pack&position=Csp5_scaffold_04217:6885-7103 Csp5_scaffold_04217:6885-7103]
+| 109,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51&tanDups=pack&gap=dense&position=Csp5_scaffold_04217:6885-7103 Csp5_scaffold_04217:6885-7103]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeSp51 plot caeSp51]
 |-
@@ Line 1,145: / Line 1,243: @@
 | style='text-align:right'| 1418
 | style='text-align:right'| 221671479
-| 195,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp91&tanDups=pack&position=Scaffold7109:118818-119208 Scaffold7109:118818-119208]
+| 195,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp91&tanDups=pack&gap=dense&position=Scaffold7109:118818-119208 Scaffold7109:118818-119208]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=caeSp91 plot caeSp91]
 |-
@@ Line 1,159: / Line 1,257: @@
 | style='text-align:right'| 590
 | style='text-align:right'| 450885170
-| 1104,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1&tanDups=pack&position=KL218440:2851016-2853224 KL218440:2851016-2853224]
+| 1104,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1&tanDups=pack&gap=dense&position=KL218440:2851016-2853224 KL218440:2851016-2853224]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=calAnn1 plot calAnn1]
 |-
@@ Line 1,173: / Line 1,271: @@
 | style='text-align:right'| 2838
 | style='text-align:right'| 7224876806
-| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac1&tanDups=pack&position=Contig38531:3004-3688 Contig38531:3004-3688]
+| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac1&tanDups=pack&gap=dense&position=Contig38531:3004-3688 Contig38531:3004-3688]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=calJac1 plot calJac1]
 |-
@@ Line 1,187: / Line 1,285: @@
 | style='text-align:right'| 4319
 | style='text-align:right'| 6020954211
-| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3&tanDups=pack&position=chrUn_GL289980:2548-3232 chrUn_GL289980:2548-3232]
+| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3&tanDups=pack&gap=dense&position=chrUn_GL289980:2548-3232 chrUn_GL289980:2548-3232]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=calJac3 plot calJac3]
 |-
@@ Line 1,201: / Line 1,299: @@
 | style='text-align:right'| 1428
 | style='text-align:right'| 1794921679
-| 144,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1&tanDups=pack&position=KI635985:586597-586885 KI635985:586597-586885]
+| 144,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1&tanDups=pack&gap=dense&position=KI635985:586597-586885 KI635985:586597-586885]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=calMil1 plot calMil1]
 |-
@@ Line 1,215: / Line 1,313: @@
 | style='text-align:right'| 162
 | style='text-align:right'| 292517673
-| 934,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1&tanDups=pack&position=KB017230:2215149-2217017 KB017230:2215149-2217017]
+| 934,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1&tanDups=pack&gap=dense&position=KB017230:2215149-2217017 KB017230:2215149-2217017]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=camFer1 plot camFer1]
 |-
@@ Line 1,229: / Line 1,327: @@
 | style='text-align:right'| 8269
 | style='text-align:right'| 6176862199
-| 292,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam1&tanDups=pack&position=chr7:79846479-79847063 chr7:79846479-79847063]
+| 292,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam1&tanDups=pack&gap=dense&position=chr7:79846479-79847063 chr7:79846479-79847063]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=canFam1 plot canFam1]
 |-
@@ Line 1,243: / Line 1,341: @@
 | style='text-align:right'| 7862
 | style='text-align:right'| 8147344317
-| 746,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam2&tanDups=pack&position=chrUn:76334072-76335564 chrUn:76334072-76335564]
+| 746,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam2&tanDups=pack&gap=dense&position=chrUn:76334072-76335564 chrUn:76334072-76335564]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=canFam2 plot canFam2]
 |-
@@ Line 1,257: / Line 1,355: @@
 | style='text-align:right'| 7312
 | style='text-align:right'| 7976595682
-| 292,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3&tanDups=pack&position=chr7:77369247-77369831 chr7:77369247-77369831]
+| 292,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3&tanDups=pack&gap=dense&position=chr7:77369247-77369831 chr7:77369247-77369831]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=canFam3 plot canFam3]
 |-
@@ Line 1,271: / Line 1,369: @@
 | style='text-align:right'| 138
 | style='text-align:right'| 18530637
-| 210,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFamPoodle1&tanDups=pack&position=AACN010470517:102-522 AACN010470517:102-522]
+| 210,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFamPoodle1&tanDups=pack&gap=dense&position=AACN010470517:102-522 AACN010470517:102-522]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=canFamPoodle1 plot canFamPoodle1]
 |-
@@ Line 1,285: / Line 1,383: @@
 | style='text-align:right'| 617
 | style='text-align:right'| 139440788
-| 121,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canHg12&tanDups=pack&position=12:76878573-76878815 12:76878573-76878815]
+| 121,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canHg12&tanDups=pack&gap=dense&position=12:76878573-76878815 12:76878573-76878815]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=canHg12 plot canHg12]
 |-
@@ Line 1,299: / Line 1,397: @@
 | style='text-align:right'| 389.5
 | style='text-align:right'| 221999357
-| 1265,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1&tanDups=pack&position=KL360999:16916-19447 KL360999:16916-19447]
+| 1265,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1&tanDups=pack&gap=dense&position=KL360999:16916-19447 KL360999:16916-19447]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=capCar1 plot capCar1]
 |-
@@ Line 1,313: / Line 1,411: @@
 | style='text-align:right'| 6750
 | style='text-align:right'| 4701845701
-| 4915,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1&tanDups=pack&position=chr24:61180186-61190016 chr24:61180186-61190016]
+| 4915,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1&tanDups=pack&gap=dense&position=chr24:61180186-61190016 chr24:61180186-61190016]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=capHir1 plot capHir1]
 |-
@@ Line 1,327: / Line 1,425: @@
 | style='text-align:right'| 68
 | style='text-align:right'| 30549622
-| 529,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1&tanDups=pack&position=KK515247:46620-47678 KK515247:46620-47678]
+| 529,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1&tanDups=pack&gap=dense&position=KK515247:46620-47678 KK515247:46620-47678]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=carCri1 plot carCri1]
 |-
 | 099
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor2 cavPor2]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 153670
+| style='text-align:right'| 41
+| style='text-align:right'| 9672753
+| &nbsp;
+| style='text-align:right'| 3682
+| style='text-align:right'| 600037188
+| 260,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor2&tanDups=pack&gap=dense&position=scaffold_228157:14475-14995 scaffold_228157:14475-14995]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cavPor2 plot cavPor2]
+|-
+| 100
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]
@@ Line 1,341: / Line 1,453: @@
 | style='text-align:right'| 5720
 | style='text-align:right'| 3122228393
-| 260,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3&tanDups=pack&position=scaffold_239:788868-789388 scaffold_239:788868-789388]
+| 260,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3&tanDups=pack&gap=dense&position=scaffold_239:788868-789388 scaffold_239:788868-789388]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cavPor3 plot cavPor3]
 |-
-| 100
+| 101
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb1 cb1]
@@ Line 1,355: / Line 1,467: @@
 | style='text-align:right'| 558
 | style='text-align:right'| 98718219
-| 191,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb1&tanDups=pack&position=chrUn:90311348-90311730 chrUn:90311348-90311730]
+| 191,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb1&tanDups=pack&gap=dense&position=chrUn:90311348-90311730 chrUn:90311348-90311730]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cb1 plot cb1]
 |-
-| 101
+| 102
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb2 cb2]
@@ Line 1,369: / Line 1,481: @@
 | style='text-align:right'| 560
 | style='text-align:right'| 98588417
-| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb2&tanDups=pack&position=chrIII:126724-127358 chrIII:126724-127358]
+| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb2&tanDups=pack&gap=dense&position=chrIII:126724-127358 chrIII:126724-127358]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cb2 plot cb2]
 |-
-| 102
+| 103
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb3 cb3]
@@ Line 1,383: / Line 1,495: @@
 | style='text-align:right'| 568.5
 | style='text-align:right'| 99618994
-| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb3&tanDups=pack&position=chrIII:11646590-11647224 chrIII:11646590-11647224]
+| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb3&tanDups=pack&gap=dense&position=chrIII:11646590-11647224 chrIII:11646590-11647224]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cb3 plot cb3]
 |-
-| 103
+| 104
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb4 cb4]
@@ Line 1,397: / Line 1,509: @@
 | style='text-align:right'| 578
 | style='text-align:right'| 100960462
-| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb4&tanDups=pack&position=chrIII:76433-77067 chrIII:76433-77067]
+| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb4&tanDups=pack&gap=dense&position=chrIII:76433-77067 chrIII:76433-77067]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cb4 plot cb4]
 |-
-| 104
+| 105
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce10 ce10]
@@ Line 1,411: / Line 1,523: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82769023
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce10&tanDups=pack&position=chrIV:5554976-5557976 chrIV:5554976-5557976]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce10&tanDups=pack&gap=dense&position=chrIV:5554976-5557976 chrIV:5554976-5557976]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce10 plot ce10]
 |-
-| 105
+| 106
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]
@@ Line 1,425: / Line 1,537: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82800067
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11&tanDups=pack&position=chrIV:5554985-5557985 chrIV:5554985-5557985]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11&tanDups=pack&gap=dense&position=chrIV:5554985-5557985 chrIV:5554985-5557985]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce11 plot ce11]
 |-
-| 106
+| 107
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce2 ce2]
@@ Line 1,439: / Line 1,551: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82752389
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce2&tanDups=pack&position=chrIV:5554978-5557978 chrIV:5554978-5557978]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce2&tanDups=pack&gap=dense&position=chrIV:5554978-5557978 chrIV:5554978-5557978]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce2 plot ce2]
 |-
-| 107
+| 108
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce3 ce3]
@@ Line 1,453: / Line 1,565: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82752398
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce3&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce3&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce3 plot ce3]
 |-
-| 108
+| 109
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce4 ce4]
@@ Line 1,467: / Line 1,579: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82743753
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce4&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce4&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce4 plot ce4]
 |-
-| 109
+| 110
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce5 ce5]
@@ Line 1,481: / Line 1,593: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82743927
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce5&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce5&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce5 plot ce5]
 |-
-| 110
+| 111
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce6 ce6]
@@ Line 1,495: / Line 1,607: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82743927
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce6&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce6&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce6 plot ce6]
 |-
-| 111
+| 112
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce7 ce7]
@@ Line 1,509: / Line 1,621: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82769007
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce7&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce7&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce7 plot ce7]
 |-
-| 112
+| 113
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce8 ce8]
@@ Line 1,523: / Line 1,635: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82769007
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce8&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce8&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce8 plot ce8]
 |-
-| 113
+| 114
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce9 ce9]
@@ Line 1,537: / Line 1,649: @@
 | style='text-align:right'| 427
 | style='text-align:right'| 82769007
-| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce9&tanDups=pack&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
+| 1500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce9&tanDups=pack&gap=dense&position=chrIV:5554972-5557972 chrIV:5554972-5557972]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ce9 plot ce9]
 |-
-| 114
+| 115
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]
@@ Line 1,551: / Line 1,663: @@
 | style='text-align:right'| 7694
 | style='text-align:right'| 1503937586
-| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1&tanDups=pack&position=JH767741:19156533-19156967 JH767741:19156533-19156967]
+| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1&tanDups=pack&gap=dense&position=JH767741:19156533-19156967 JH767741:19156533-19156967]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cerSim1 plot cerSim1]
 |-
-| 115
+| 116
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc1 chaVoc1]
@@ Line 1,565: / Line 1,677: @@
 | style='text-align:right'| 1813
 | style='text-align:right'| 256127930
-| 1729,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc1&tanDups=pack&position=KL408233:1252791-1256250 KL408233:1252791-1256250]
+| 1729,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc1&tanDups=pack&gap=dense&position=KL408233:1252791-1256250 KL408233:1252791-1256250]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chaVoc1 plot chaVoc1]
 |-
-| 116
+| 117
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2]
@@ Line 1,579: / Line 1,691: @@
 | style='text-align:right'| 1812
 | style='text-align:right'| 256095280
-| 1729,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2&tanDups=pack&position=KL871243:1252791-1256250 KL871243:1252791-1256250]
+| 1729,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2&tanDups=pack&gap=dense&position=KL871243:1252791-1256250 KL871243:1252791-1256250]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chaVoc2 plot chaVoc2]
 |-
-| 117
+| 118
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]
@@ Line 1,593: / Line 1,705: @@
 | style='text-align:right'| 2112
 | style='text-align:right'| 1711904320
-| 2073,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1&tanDups=pack&position=KB534909:887250-891396 KB534909:887250-891396]
+| 2073,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1&tanDups=pack&gap=dense&position=KB534909:887250-891396 KB534909:887250-891396]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cheMyd1 plot cheMyd1]
 |-
-| 118
+| 119
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]
@@ Line 1,607: / Line 1,719: @@
 | style='text-align:right'| 5673
 | style='text-align:right'| 1154905940
-| 274,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1&tanDups=pack&position=JH721868:33430685-33431233 JH721868:33430685-33431233]
+| 274,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1&tanDups=pack&gap=dense&position=JH721868:33430685-33431233 JH721868:33430685-33431233]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chiLan1 plot chiLan1]
 |-
-| 119
+| 120
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab1 chlSab1]
@@ Line 1,621: / Line 1,733: @@
 | style='text-align:right'| 4819
 | style='text-align:right'| 6164212406
-| 1783,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab1&tanDups=pack&position=chrY:1553648-1557214 chrY:1553648-1557214]
+| 1783,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab1&tanDups=pack&gap=dense&position=chrY:1553648-1557214 chrY:1553648-1557214]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chlSab1 plot chlSab1]
 |-
-| 120
+| 121
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2 chlSab2]
@@ Line 1,635: / Line 1,747: @@
 | style='text-align:right'| 4823
 | style='text-align:right'| 6168422847
-| 1783,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2&tanDups=pack&position=chrY:1553648-1557214 chrY:1553648-1557214]
+| 1783,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2&tanDups=pack&gap=dense&position=chrY:1553648-1557214 chrY:1553648-1557214]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chlSab2 plot chlSab2]
 |-
-| 121
+| 122
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1]
@@ Line 1,649: / Line 1,761: @@
 | style='text-align:right'| 165
 | style='text-align:right'| 94696650
-| 497,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1&tanDups=pack&position=KK750077:105999-106993 KK750077:105999-106993]
+| 497,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1&tanDups=pack&gap=dense&position=KK750077:105999-106993 KK750077:105999-106993]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chlUnd1 plot chlUnd1]
 |-
-| 122
+| 123
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1 choHof1]
@@ Line 1,663: / Line 1,775: @@
 | style='text-align:right'| 431
 | style='text-align:right'| 262030496
-| 307,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1&tanDups=pack&position=scaffold_3919:20103-20717 scaffold_3919:20103-20717]
+| 307,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1&tanDups=pack&gap=dense&position=scaffold_3919:20103-20717 scaffold_3919:20103-20717]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=choHof1 plot choHof1]
 |-
-| 123
+| 124
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1 chrAsi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000296735.1/ GCF_000296735.1]
+| allpaths v. R42316 HAPLOIDIFY=True
+| style='text-align:right'| 805638
+| style='text-align:right'| 33
+| style='text-align:right'| 32771937
+| &nbsp;
+| style='text-align:right'| 6438
+| style='text-align:right'| 6141282666
+| 8327,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1&tanDups=pack&gap=dense&position=JH823352:5306275-5322931 JH823352:5306275-5322931]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chrAsi1 plot chrAsi1]
+|-
+| 125
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic1 chrPic1]
@@ Line 1,677: / Line 1,803: @@
 | style='text-align:right'| 1275
 | style='text-align:right'| 1210278039
-| 255,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic1&tanDups=pack&position=JH584700:738019-738529 JH584700:738019-738529]
+| 255,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic1&tanDups=pack&gap=dense&position=JH584700:738019-738529 JH584700:738019-738529]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chrPic1 plot chrPic1]
 |-
-| 124
+| 126
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]
@@ Line 1,691: / Line 1,817: @@
 | style='text-align:right'| 1246
 | style='text-align:right'| 1347589030
-| 269,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2&tanDups=pack&position=chrUn_KK085497v1:1941-2479 chrUn_KK085497v1:1941-2479]
+| 269,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2&tanDups=pack&gap=dense&position=chrUn_KK085497v1:1941-2479 chrUn_KK085497v1:1941-2479]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=chrPic2 plot chrPic2]
 |-
-| 125
+| 127
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1 ci1]
@@ Line 1,705: / Line 1,831: @@
 | style='text-align:right'| 626
 | style='text-align:right'| 122189601
-| 486,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1&tanDups=pack&position=Scaffold_604:30085-31057 Scaffold_604:30085-31057]
+| 486,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1&tanDups=pack&gap=dense&position=Scaffold_604:30085-31057 Scaffold_604:30085-31057]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ci1 plot ci1]
 |-
-| 126
+| 128
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci2 ci2]
@@ Line 1,719: / Line 1,845: @@
 | style='text-align:right'| 1961
 | style='text-align:right'| 566064667
-| 358,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci2&tanDups=pack&position=scaffold_83:159982-160698 scaffold_83:159982-160698]
+| 358,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci2&tanDups=pack&gap=dense&position=scaffold_83:159982-160698 scaffold_83:159982-160698]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ci2 plot ci2]
 |-
-| 127
+| 129
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3]
@@ Line 1,733: / Line 1,859: @@
 | style='text-align:right'| 692
 | style='text-align:right'| 149951145
-| 486,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3&tanDups=pack&position=chrUn_NW_004190340v1:65099-66071 chrUn_NW_004190340v1:65099-66071]
+| 486,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3&tanDups=pack&gap=dense&position=chrUn_NW_004190340v1:65099-66071 chrUn_NW_004190340v1:65099-66071]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ci3 plot ci3]
 |-
-| 128
+| 130
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav1 cioSav1]
@@ Line 1,747: / Line 1,873: @@
 | style='text-align:right'| 2503
 | style='text-align:right'| 618224769
-| 189,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav1&tanDups=pack&position=ps_297:30448-30826 ps_297:30448-30826]
+| 189,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav1&tanDups=pack&gap=dense&position=ps_297:30448-30826 ps_297:30448-30826]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cioSav1 plot cioSav1]
 |-
-| 129
+| 131
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav2 cioSav2]
@@ Line 1,761: / Line 1,887: @@
 | style='text-align:right'| 2875
 | style='text-align:right'| 819500559
-| 280,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav2&tanDups=pack&position=reftig_238:125039-125599 reftig_238:125039-125599]
+| 280,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav2&tanDups=pack&gap=dense&position=reftig_238:125039-125599 reftig_238:125039-125599]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cioSav2 plot cioSav2]
 |-
-| 130
+| 132
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1]
@@ Line 1,775: / Line 1,901: @@
 | style='text-align:right'| 6816
 | style='text-align:right'| 5701906030
-| 219,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1&tanDups=pack&position=NW_012114455v1:1212718-1213156 NW_012114455v1:1212718-1213156]
+| 219,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1&tanDups=pack&gap=dense&position=NW_012114455v1:1212718-1213156 NW_012114455v1:1212718-1213156]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=colAng1 plot colAng1]
 |-
-| 131
+| 133
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]
@@ Line 1,789: / Line 1,915: @@
 | style='text-align:right'| 112
 | style='text-align:right'| 419571584
-| 3080,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1&tanDups=pack&position=KB375367:1029739-1035900 KB375367:1029739-1035900]
+| 3080,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1&tanDups=pack&gap=dense&position=KB375367:1029739-1035900 KB375367:1029739-1035900]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=colLiv1 plot colLiv1]
 |-
-| 132
+| 134
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1]
@@ Line 1,803: / Line 1,929: @@
 | style='text-align:right'| 131
 | style='text-align:right'| 154687137
-| 309,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1&tanDups=pack&position=KK533057:6873-7491 KK533057:6873-7491]
+| 309,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1&tanDups=pack&gap=dense&position=KK533057:6873-7491 KK533057:6873-7491]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=colStr1 plot colStr1]
 |-
-| 133
+| 135
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]
@@ Line 1,817: / Line 1,943: @@
 | style='text-align:right'| 7807
 | style='text-align:right'| 2109955223
-| 265,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1&tanDups=pack&position=JH655888:40209348-40209878 JH655888:40209348-40209878]
+| 265,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1&tanDups=pack&gap=dense&position=JH655888:40209348-40209878 JH655888:40209348-40209878]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=conCri1 plot conCri1]
 |-
-| 134
+| 136
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1]
@@ Line 1,831: / Line 1,957: @@
 | style='text-align:right'| 297
 | style='text-align:right'| 248570100
-| 1583,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1&tanDups=pack&position=KK718913:5901493-5904659 KK718913:5901493-5904659]
+| 1583,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1&tanDups=pack&gap=dense&position=KK718913:5901493-5904659 KK718913:5901493-5904659]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=corBra1 plot corBra1]
 |-
-| 135
+| 137
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1]
@@ Line 1,845: / Line 1,971: @@
 | style='text-align:right'| 370
 | style='text-align:right'| 184023111
-| 1935,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1&tanDups=pack&position=KL997525:15617964-15621834 KL997525:15617964-15621834]
+| 1935,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1&tanDups=pack&gap=dense&position=KL997525:15617964-15621834 KL997525:15617964-15621834]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=corCor1 plot corCor1]
 |-
-| 136
+| 138
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cotJap1 cotJap1]
@@ Line 1,859: / Line 1,985: @@
 | style='text-align:right'| 75
 | style='text-align:right'| 2914174
-| 214,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cotJap1&tanDups=pack&position=DF262918:84572-85000 DF262918:84572-85000]
+| 214,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cotJap1&tanDups=pack&gap=dense&position=DF262918:84572-85000 DF262918:84572-85000]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cotJap1 plot cotJap1]
 |-
-| 137
+| 139
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]
@@ Line 1,873: / Line 1,999: @@
 | style='text-align:right'| 4676
 | style='text-align:right'| 2562035140
-| 2419,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1&tanDups=pack&position=KE383702:1200830-1205668 KE383702:1200830-1205668]
+| 2419,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1&tanDups=pack&gap=dense&position=KE383702:1200830-1205668 KE383702:1200830-1205668]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=criGri1 plot criGri1]
 |-
-| 138
+| 140
 | 2017
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGriChoV1 criGriChoV1]
@@ Line 1,887: / Line 2,013: @@
 | style='text-align:right'| 3409
 | style='text-align:right'| 2361128543
-| 2346,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGriChoV1&tanDups=pack&position=NW_003614503v1:231537-236229 NW_003614503v1:231537-236229]
+| 2346,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGriChoV1&tanDups=pack&gap=dense&position=NW_003614503v1:231537-236229 NW_003614503v1:231537-236229]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=criGriChoV1 plot criGriChoV1]
 |-
-| 139
+| 141
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1]
@@ Line 1,901: / Line 2,027: @@
 | style='text-align:right'| 2142
 | style='text-align:right'| 633238955
-| 2278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1&tanDups=pack&position=KL448309:4464943-4469499 KL448309:4464943-4469499]
+| 2278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1&tanDups=pack&gap=dense&position=KL448309:4464943-4469499 KL448309:4464943-4469499]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cucCan1 plot cucCan1]
 |-
-| 140
+| 142
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1]
@@ Line 1,915: / Line 2,041: @@
 | style='text-align:right'| 261
 | style='text-align:right'| 184971677
-| 1536,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1&tanDups=pack&position=chr1:16715796-16718868 chr1:16715796-16718868]
+| 1536,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1&tanDups=pack&gap=dense&position=chr1:16715796-16718868 chr1:16715796-16718868]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cynSem1 plot cynSem1]
 |-
-| 141
+| 143
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1]
@@ Line 1,929: / Line 2,055: @@
 | style='text-align:right'| 1299
 | style='text-align:right'| 502219020
-| 2138,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1&tanDups=pack&position=KL652705:564642-568918 KL652705:564642-568918]
+| 2138,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1&tanDups=pack&gap=dense&position=KL652705:564642-568918 KL652705:564642-568918]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=cypVar1 plot cypVar1]
 |-
-| 142
+| 144
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]
@@ Line 1,943: / Line 2,069: @@
 | style='text-align:right'| 1138
 | style='text-align:right'| 3506165088
-| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10&tanDups=pack&position=chr7:19536660-19538318 chr7:19536660-19538318]
+| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10&tanDups=pack&gap=dense&position=chr7:19536660-19538318 chr7:19536660-19538318]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=danRer10 plot danRer10]
 |-
-| 143
+| 145
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer4 danRer4]
@@ Line 1,957: / Line 2,083: @@
 | style='text-align:right'| 1483
 | style='text-align:right'| -5209059568647030784
-| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer4&tanDups=pack&position=chr7:22863126-22864784 chr7:22863126-22864784]
+| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer4&tanDups=pack&gap=dense&position=chr7:22863126-22864784 chr7:22863126-22864784]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=danRer4 plot danRer4]
 |-
-| 144
+| 146
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer5 danRer5]
@@ Line 1,971: / Line 2,097: @@
 | style='text-align:right'| 1103
 | style='text-align:right'| 3637100049
-| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer5&tanDups=pack&position=chr7:21951036-21952694 chr7:21951036-21952694]
+| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer5&tanDups=pack&gap=dense&position=chr7:21951036-21952694 chr7:21951036-21952694]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=danRer5 plot danRer5]
 |-
-| 145
+| 147
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer6 danRer6]
@@ Line 1,985: / Line 2,111: @@
 | style='text-align:right'| 1381
 | style='text-align:right'| 4517471825
-| 2083,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer6&tanDups=pack&position=chr10:31284766-31288932 chr10:31284766-31288932]
+| 2083,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer6&tanDups=pack&gap=dense&position=chr10:31284766-31288932 chr10:31284766-31288932]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=danRer6 plot danRer6]
 |-
-| 146
+| 148
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7]
@@ Line 1,999: / Line 2,125: @@
 | style='text-align:right'| 1289
 | style='text-align:right'| 3925402743
-| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7&tanDups=pack&position=chr7:20946224-20947882 chr7:20946224-20947882]
+| 829,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7&tanDups=pack&gap=dense&position=chr7:20946224-20947882 chr7:20946224-20947882]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=danRer7 plot danRer7]
 |-
-| 147
+| 149
+| 2005
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov1 dasNov1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 154605
+| style='text-align:right'| 37
+| style='text-align:right'| 7624828
+| &nbsp;
+| style='text-align:right'| 1001
+| style='text-align:right'| 335128473
+| 306,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov1&tanDups=pack&gap=dense&position=scaffold_52384:6155-6767 scaffold_52384:6155-6767]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dasNov1 plot dasNov1]
+|-
+| 150
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov2 dasNov2]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 208970
+| style='text-align:right'| 39
+| style='text-align:right'| 11666796
+| &nbsp;
+| style='text-align:right'| 2156
+| style='text-align:right'| 635204397
+| 306,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov2&tanDups=pack&gap=dense&position=scaffold_34025:7890-8502 scaffold_34025:7890-8502]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dasNov2 plot dasNov2]
+|-
+| 151
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000208655.1/ GCF_000208655.1]
+| Celera Assembler v. 6.0; Atlas-Link; Atlas-Gap-Fill
+| style='text-align:right'| 482246
+| style='text-align:right'| 37
+| style='text-align:right'| 24275809
+| &nbsp;
+| style='text-align:right'| 3870
+| style='text-align:right'| 2851995366
+| 1375,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3&tanDups=pack&gap=dense&position=JH574868:466920-469670 JH574868:466920-469670]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dasNov3 plot dasNov3]
+|-
+| 152
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1 dicLab1]
@@ Line 2,013: / Line 2,181: @@
 | style='text-align:right'| 924
 | style='text-align:right'| 691437386
-| 841,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1&tanDups=pack&position=HG916851:32290203-32291885 HG916851:32290203-32291885]
+| 841,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1&tanDups=pack&gap=dense&position=HG916851:32290203-32291885 HG916851:32290203-32291885]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dicLab1 plot dicLab1]
 |-
-| 148
+| 153
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1 dipOrd1]
@@ Line 2,027: / Line 2,195: @@
 | style='text-align:right'| 2185
 | style='text-align:right'| 7963556509
-| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1&tanDups=pack&position=scaffold_30074:4167-4533 scaffold_30074:4167-4533]
+| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1&tanDups=pack&gap=dense&position=scaffold_30074:4167-4533 scaffold_30074:4167-4533]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dipOrd1 plot dipOrd1]
 |-
-| 149
+| 154
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1 dirImm1]
@@ Line 2,041: / Line 2,209: @@
 | style='text-align:right'| 58
 | style='text-align:right'| 1820327
-| 1613,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1&tanDups=pack&position=nDi_2_2_scaf00284:19002-22228 nDi_2_2_scaf00284:19002-22228]
+| 1613,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1&tanDups=pack&gap=dense&position=nDi_2_2_scaf00284:19002-22228 nDi_2_2_scaf00284:19002-22228]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dirImm1 plot dirImm1]
 |-
-| 150
+| 155
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm1 dm1]
@@ Line 2,055: / Line 2,223: @@
 | style='text-align:right'| 3445
 | style='text-align:right'| 60460276
-| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm1&tanDups=pack&position=chr2L:1894810-1902575 chr2L:1894810-1902575]
+| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm1&tanDups=pack&gap=dense&position=chr2L:1894810-1902575 chr2L:1894810-1902575]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dm1 plot dm1]
 |-
-| 151
+| 156
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm2 dm2]
@@ Line 2,069: / Line 2,237: @@
 | style='text-align:right'| 3723
 | style='text-align:right'| 67342596
-| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm2&tanDups=pack&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
+| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm2&tanDups=pack&gap=dense&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dm2 plot dm2]
 |-
-| 152
+| 157
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm3 dm3]
@@ Line 2,083: / Line 2,251: @@
 | style='text-align:right'| 2412
 | style='text-align:right'| 622002007
-| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm3&tanDups=pack&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
+| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm3&tanDups=pack&gap=dense&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dm3 plot dm3]
 |-
-| 153
+| 158
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6]
@@ Line 2,097: / Line 2,265: @@
 | style='text-align:right'| 3448
 | style='text-align:right'| 254474999
-| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6&tanDups=pack&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
+| 3882,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6&tanDups=pack&gap=dense&position=chr2L:1893145-1900910 chr2L:1893145-1900910]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dm6 plot dm6]
 |-
-| 154
+| 159
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp2 dp2]
@@ Line 2,111: / Line 2,279: @@
 | style='text-align:right'| 926
 | style='text-align:right'| 42217528
-| 227,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp2&tanDups=pack&position=Contig7446_Contig2444:1979445-1979899 Contig7446_Contig2444:1979445-1979899]
+| 227,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp2&tanDups=pack&gap=dense&position=Contig7446_Contig2444:1979445-1979899 Contig7446_Contig2444:1979445-1979899]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dp2 plot dp2]
 |-
-| 155
+| 160
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp3 dp3]
@@ Line 2,125: / Line 2,293: @@
 | style='text-align:right'| 1239
 | style='text-align:right'| 62703720
-| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp3&tanDups=pack&position=chrU:9357988-9358612 chrU:9357988-9358612]
+| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp3&tanDups=pack&gap=dense&position=chrU:9357988-9358612 chrU:9357988-9358612]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dp3 plot dp3]
 |-
-| 156
+| 161
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp4 dp4]
@@ Line 2,139: / Line 2,307: @@
 | style='text-align:right'| 2437
 | style='text-align:right'| 228127096
-| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp4&tanDups=pack&position=Unknown_singleton_2460:32411-33035 Unknown_singleton_2460:32411-33035]
+| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp4&tanDups=pack&gap=dense&position=Unknown_singleton_2460:32411-33035 Unknown_singleton_2460:32411-33035]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=dp4 plot dp4]
 |-
-| 157
+| 162
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1 droAlb1]
@@ Line 2,153: / Line 2,321: @@
 | style='text-align:right'| 70
 | style='text-align:right'| 35343627
-| 76,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1&tanDups=pack&position=JH853217:889-1041 JH853217:889-1041]
+| 76,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1&tanDups=pack&gap=dense&position=JH853217:889-1041 JH853217:889-1041]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droAlb1 plot droAlb1]
 |-
-| 158
+| 163
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna1 droAna1]
@@ Line 2,167: / Line 2,335: @@
 | style='text-align:right'| 697
 | style='text-align:right'| 196198368
-| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna1&tanDups=pack&position=2446670:645-1789 2446670:645-1789]
+| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna1&tanDups=pack&gap=dense&position=2446670:645-1789 2446670:645-1789]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droAna1 plot droAna1]
 |-
-| 159
+| 164
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna2 droAna2]
@@ Line 2,181: / Line 2,349: @@
 | style='text-align:right'| 918
 | style='text-align:right'| 748771139
-| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna2&tanDups=pack&position=scaffold_13499:1095908-1097052 scaffold_13499:1095908-1097052]
+| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna2&tanDups=pack&gap=dense&position=scaffold_13499:1095908-1097052 scaffold_13499:1095908-1097052]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droAna2 plot droAna2]
 |-
-| 160
+| 165
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3]
@@ Line 2,195: / Line 2,363: @@
 | style='text-align:right'| 927
 | style='text-align:right'| 745835855
-| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3&tanDups=pack&position=scaffold_13499:1092668-1093812 scaffold_13499:1092668-1093812]
+| 572,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3&tanDups=pack&gap=dense&position=scaffold_13499:1092668-1093812 scaffold_13499:1092668-1093812]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droAna3 plot droAna3]
 |-
-| 161
+| 166
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2]
@@ Line 2,209: / Line 2,377: @@
 | style='text-align:right'| 2591
 | style='text-align:right'| 175612579
-| 2241,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2&tanDups=pack&position=AFFD02006372:54233-58717 AFFD02006372:54233-58717]
+| 2241,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2&tanDups=pack&gap=dense&position=AFFD02006372:54233-58717 AFFD02006372:54233-58717]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droBia2 plot droBia2]
 |-
-| 162
+| 167
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2]
@@ Line 2,223: / Line 2,391: @@
 | style='text-align:right'| 1371
 | style='text-align:right'| 204354268
-| 179,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2&tanDups=pack&position=KB463958:131929-132287 KB463958:131929-132287]
+| 179,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2&tanDups=pack&gap=dense&position=KB463958:131929-132287 KB463958:131929-132287]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droBip2 plot droBip2]
 |-
-| 163
+| 168
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2]
@@ Line 2,237: / Line 2,405: @@
 | style='text-align:right'| 2187
 | style='text-align:right'| 135919965
-| 270,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2&tanDups=pack&position=KB458613:1953986-1954526 KB458613:1953986-1954526]
+| 270,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2&tanDups=pack&gap=dense&position=KB458613:1953986-1954526 KB458613:1953986-1954526]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droEle2 plot droEle2]
 |-
-| 164
+| 169
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre1 droEre1]
@@ Line 2,251: / Line 2,419: @@
 | style='text-align:right'| 674
 | style='text-align:right'| 191777516
-| 359,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre1&tanDups=pack&position=scaffold_1301:371-1089 scaffold_1301:371-1089]
+| 359,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre1&tanDups=pack&gap=dense&position=scaffold_1301:371-1089 scaffold_1301:371-1089]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droEre1 plot droEre1]
 |-
-| 165
+| 170
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2]
@@ Line 2,265: / Line 2,433: @@
 | style='text-align:right'| 676
 | style='text-align:right'| 190524603
-| 359,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2&tanDups=pack&position=scaffold_1301:371-1089 scaffold_1301:371-1089]
+| 359,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2&tanDups=pack&gap=dense&position=scaffold_1301:371-1089 scaffold_1301:371-1089]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droEre2 plot droEre2]
 |-
-| 166
+| 171
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2]
@@ Line 2,279: / Line 2,447: @@
 | style='text-align:right'| 1518
 | style='text-align:right'| 181127987
-| 141,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2&tanDups=pack&position=KB464979:6084-6366 KB464979:6084-6366]
+| 141,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2&tanDups=pack&gap=dense&position=KB464979:6084-6366 KB464979:6084-6366]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droEug2 plot droEug2]
 |-
-| 167
+| 172
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2]
@@ Line 2,293: / Line 2,461: @@
 | style='text-align:right'| 2380.5
 | style='text-align:right'| 83742114
-| 190,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2&tanDups=pack&position=AFFG02001364:4041-4421 AFFG02001364:4041-4421]
+| 190,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2&tanDups=pack&gap=dense&position=AFFG02001364:4041-4421 AFFG02001364:4041-4421]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droFic2 plot droFic2]
 |-
-| 168
+| 173
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri1 droGri1]
@@ Line 2,307: / Line 2,475: @@
 | style='text-align:right'| 509
 | style='text-align:right'| 538034457
-| 491,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri1&tanDups=pack&position=scaffold_2211:899-1881 scaffold_2211:899-1881]
+| 491,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri1&tanDups=pack&gap=dense&position=scaffold_2211:899-1881 scaffold_2211:899-1881]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droGri1 plot droGri1]
 |-
-| 169
+| 174
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2]
@@ Line 2,321: / Line 2,489: @@
 | style='text-align:right'| 522
 | style='text-align:right'| 418546843
-| 188,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2&tanDups=pack&position=scaffold_6592:1167-1543 scaffold_6592:1167-1543]
+| 188,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2&tanDups=pack&gap=dense&position=scaffold_6592:1167-1543 scaffold_6592:1167-1543]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droGri2 plot droGri2]
 |-
-| 170
+| 175
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2]
@@ Line 2,335: / Line 2,503: @@
 | style='text-align:right'| 1533.5
 | style='text-align:right'| 112074726
-| 117,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2&tanDups=pack&position=KB459586:778466-778700 KB459586:778466-778700]
+| 117,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2&tanDups=pack&gap=dense&position=KB459586:778466-778700 KB459586:778466-778700]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droKik2 plot droKik2]
 |-
-| 171
+| 176
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2]
@@ Line 2,349: / Line 2,517: @@
 | style='text-align:right'| 1747
 | style='text-align:right'| 75101816
-| 140,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2&tanDups=pack&position=chr2:3040735-3041015 chr2:3040735-3041015]
+| 140,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2&tanDups=pack&gap=dense&position=chr2:3040735-3041015 chr2:3040735-3041015]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droMir2 plot droMir2]
 |-
-| 172
+| 177
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj1 droMoj1]
@@ Line 2,363: / Line 2,531: @@
 | style='text-align:right'| 310
 | style='text-align:right'| 78711524
-| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj1&tanDups=pack&position=contig_34282:247-697 contig_34282:247-697]
+| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj1&tanDups=pack&gap=dense&position=contig_34282:247-697 contig_34282:247-697]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droMoj1 plot droMoj1]
 |-
-| 173
+| 178
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj2 droMoj2]
@@ Line 2,377: / Line 2,545: @@
 | style='text-align:right'| 1086
 | style='text-align:right'| 363630258
-| 202,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj2&tanDups=pack&position=scaffold_6540:14391223-14391627 scaffold_6540:14391223-14391627]
+| 202,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj2&tanDups=pack&gap=dense&position=scaffold_6540:14391223-14391627 scaffold_6540:14391223-14391627]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droMoj2 plot droMoj2]
 |-
-| 174
+| 179
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3]
@@ Line 2,391: / Line 2,559: @@
 | style='text-align:right'| 1114
 | style='text-align:right'| 361818537
-| 202,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3&tanDups=pack&position=scaffold_6540:14384339-14384743 scaffold_6540:14384339-14384743]
+| 202,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3&tanDups=pack&gap=dense&position=scaffold_6540:14384339-14384743 scaffold_6540:14384339-14384743]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droMoj3 plot droMoj3]
 |-
-| 175
+| 180
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1]
@@ Line 2,405: / Line 2,573: @@
 | style='text-align:right'| 2595
 | style='text-align:right'| 325634621
-| 580,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1&tanDups=pack&position=super_62:246420-247581 super_62:246420-247581]
+| 580,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1&tanDups=pack&gap=dense&position=super_62:246420-247581 super_62:246420-247581]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droPer1 plot droPer1]
 |-
-| 176
+| 181
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPse3 droPse3]
@@ Line 2,419: / Line 2,587: @@
 | style='text-align:right'| 2480
 | style='text-align:right'| 231367590
-| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPse3&tanDups=pack&position=chrUn_CH674897_1:32411-33035 chrUn_CH674897_1:32411-33035]
+| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPse3&tanDups=pack&gap=dense&position=chrUn_CH674897_1:32411-33035 chrUn_CH674897_1:32411-33035]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droPse3 plot droPse3]
 |-
-| 177
+| 182
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2]
@@ Line 2,433: / Line 2,601: @@
 | style='text-align:right'| 1672
 | style='text-align:right'| 235074913
-| 205,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2&tanDups=pack&position=AFPP02028413:1419-1829 AFPP02028413:1419-1829]
+| 205,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2&tanDups=pack&gap=dense&position=AFPP02028413:1419-1829 AFPP02028413:1419-1829]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droRho2 plot droRho2]
 |-
-| 178
+| 183
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1 droSec1]
@@ Line 2,447: / Line 2,615: @@
 | style='text-align:right'| 465
 | style='text-align:right'| 177925676
-| 360,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1&tanDups=pack&position=super_6483:1086-1806 super_6483:1086-1806]
+| 360,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1&tanDups=pack&gap=dense&position=super_6483:1086-1806 super_6483:1086-1806]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droSec1 plot droSec1]
 |-
-| 179
+| 184
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim1 droSim1]
@@ Line 2,461: / Line 2,629: @@
 | style='text-align:right'| 1400
 | style='text-align:right'| 171101666
-| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim1&tanDups=pack&position=chr3R_random:168062-168496 chr3R_random:168062-168496]
+| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim1&tanDups=pack&gap=dense&position=chr3R_random:168062-168496 chr3R_random:168062-168496]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droSim1 plot droSim1]
 |-
-| 180
+| 185
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim2 droSim2]
@@ Line 2,475: / Line 2,643: @@
 | style='text-align:right'| 466
 | style='text-align:right'| 26120972
-| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim2&tanDups=pack&position=chrUn_NW_015496898v1:4674-5108 chrUn_NW_015496898v1:4674-5108]
+| 217,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim2&tanDups=pack&gap=dense&position=chrUn_NW_015496898v1:4674-5108 chrUn_NW_015496898v1:4674-5108]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droSim2 plot droSim2]
 |-
-| 181
+| 186
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1]
@@ Line 2,489: / Line 2,657: @@
 | style='text-align:right'| 2277
 | style='text-align:right'| 517597655
-| 4939,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1&tanDups=pack&position=KI419149:2637663-2647541 KI419149:2637663-2647541]
+| 4939,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1&tanDups=pack&gap=dense&position=KI419149:2637663-2647541 KI419149:2637663-2647541]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droSuz1 plot droSuz1]
 |-
-| 182
+| 187
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2]
@@ Line 2,503: / Line 2,671: @@
 | style='text-align:right'| 2013
 | style='text-align:right'| 202395837
-| 306,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2&tanDups=pack&position=AFFI02002878:4290-4902 AFFI02002878:4290-4902]
+| 306,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2&tanDups=pack&gap=dense&position=AFFI02002878:4290-4902 AFFI02002878:4290-4902]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droTak2 plot droTak2]
 |-
-| 183
+| 188
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir1 droVir1]
@@ Line 2,517: / Line 2,685: @@
 | style='text-align:right'| 429
 | style='text-align:right'| 239695710
-| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir1&tanDups=pack&position=scaffold_0:5707381-5707869 scaffold_0:5707381-5707869]
+| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir1&tanDups=pack&gap=dense&position=scaffold_0:5707381-5707869 scaffold_0:5707381-5707869]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droVir1 plot droVir1]
 |-
-| 184
+| 189
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir2 droVir2]
@@ Line 2,531: / Line 2,699: @@
 | style='text-align:right'| 481
 | style='text-align:right'| 757905036
-| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir2&tanDups=pack&position=scaffold_13049:18877549-18878037 scaffold_13049:18877549-18878037]
+| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir2&tanDups=pack&gap=dense&position=scaffold_13049:18877549-18878037 scaffold_13049:18877549-18878037]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droVir2 plot droVir2]
 |-
-| 185
+| 190
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3]
@@ Line 2,545: / Line 2,713: @@
 | style='text-align:right'| 495
 | style='text-align:right'| 747769004
-| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3&tanDups=pack&position=scaffold_13049:18848863-18849351 scaffold_13049:18848863-18849351]
+| 244,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3&tanDups=pack&gap=dense&position=scaffold_13049:18848863-18849351 scaffold_13049:18848863-18849351]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droVir3 plot droVir3]
 |-
-| 186
+| 191
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil1 droWil1]
@@ Line 2,559: / Line 2,727: @@
 | style='text-align:right'| 1695
 | style='text-align:right'| 472632964
-| 954,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil1&tanDups=pack&position=scaffold_181130:9135849-9137757 scaffold_181130:9135849-9137757]
+| 954,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil1&tanDups=pack&gap=dense&position=scaffold_181130:9135849-9137757 scaffold_181130:9135849-9137757]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droWil1 plot droWil1]
 |-
-| 187
+| 192
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2]
@@ Line 2,573: / Line 2,741: @@
 | style='text-align:right'| 1695
 | style='text-align:right'| 472142234
-| 954,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2&tanDups=pack&position=CH964272:9135849-9137757 CH964272:9135849-9137757]
+| 954,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2&tanDups=pack&gap=dense&position=CH964272:9135849-9137757 CH964272:9135849-9137757]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droWil2 plot droWil2]
 |-
-| 188
+| 193
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak1 droYak1]
@@ Line 2,587: / Line 2,755: @@
 | style='text-align:right'| 3752
 | style='text-align:right'| 459910434
-| 851,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak1&tanDups=pack&position=chr3L:24830341-24832043 chr3L:24830341-24832043]
+| 851,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak1&tanDups=pack&gap=dense&position=chr3L:24830341-24832043 chr3L:24830341-24832043]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droYak1 plot droYak1]
 |-
-| 189
+| 194
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak2 droYak2]
@@ Line 2,601: / Line 2,769: @@
 | style='text-align:right'| 3518
 | style='text-align:right'| 501527798
-| 1122,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak2&tanDups=pack&position=chrU:731511-733756 chrU:731511-733756]
+| 1122,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak2&tanDups=pack&gap=dense&position=chrU:731511-733756 chrU:731511-733756]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droYak2 plot droYak2]
 |-
-| 190
+| 195
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3]
@@ Line 2,615: / Line 2,783: @@
 | style='text-align:right'| 2641
 | style='text-align:right'| 404384429
-| 1122,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3&tanDups=pack&position=chrUn_CH892674_1:731511-733756 chrUn_CH892674_1:731511-733756]
+| 1122,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3&tanDups=pack&gap=dense&position=chrUn_CH892674_1:731511-733756 chrUn_CH892674_1:731511-733756]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=droYak3 plot droYak3]
 |-
-| 193
+| 198
+| 2005
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel1 echTel1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 116281
+| style='text-align:right'| 36
+| style='text-align:right'| 5131198
+| &nbsp;
+| style='text-align:right'| 673
+| style='text-align:right'| 256369374
+| 229,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel1&tanDups=pack&gap=dense&position=scaffold_292508:7264-7722 scaffold_292508:7264-7722]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=echTel1 plot echTel1]
+|-
+| 199
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]
@@ Line 2,629: / Line 2,811: @@
 | style='text-align:right'| 2860
 | style='text-align:right'| 1049531975
-| 345,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2&tanDups=pack&position=JH980443:629844-630535 JH980443:629844-630535]
+| 345,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2&tanDups=pack&gap=dense&position=JH980443:629844-630535 JH980443:629844-630535]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=echTel2 plot echTel2]
 |-
-| 194
+| 200
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1]
@@ Line 2,643: / Line 2,825: @@
 | style='text-align:right'| 893
 | style='text-align:right'| 271113520
-| 2791,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1&tanDups=pack&position=KK500861:718810-724392 KK500861:718810-724392]
+| 2791,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1&tanDups=pack&gap=dense&position=KK500861:718810-724392 KK500861:718810-724392]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=egrGar1 plot egrGar1]
 |-
-| 195
+| 201
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1 eidHel1]
@@ Line 2,657: / Line 2,839: @@
 | style='text-align:right'| 126
 | style='text-align:right'| 36481318
-| 7647,	43,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1&tanDups=pack&position=AWHC01288168:1-15337 AWHC01288168:1-15337]
+| 7647,	43,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1&tanDups=pack&gap=dense&position=AWHC01288168:1-15337 AWHC01288168:1-15337]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eidHel1 plot eidHel1]
 |-
-| 196
+| 202
 | 2012
-| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1 eleEdw1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000299155.1/ GCF_000299155.1]
+| allpaths v. R42301 HAPLOIDIFY=True
+| style='text-align:right'| 356320
+| style='text-align:right'| 35
+| style='text-align:right'| 16209356
+| &nbsp;
+| style='text-align:right'| 6988
+| style='text-align:right'| 2779337445
+| 408,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1&tanDups=pack&gap=dense&position=JH947532:444932-445748 JH947532:444932-445748]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eleEdw1 plot eleEdw1]
+|-
+| 203
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]
 | style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000308155.1/ GCF_000308155.1]
 | ALLPATHS v. R40371
@@ Line 2,671: / Line 2,867: @@
 | style='text-align:right'| 2177
 | style='text-align:right'| 1173955475
-| 211,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1&tanDups=pack&position=JH977672:6077044-6077466 JH977672:6077044-6077466]
+| 211,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1&tanDups=pack&gap=dense&position=JH977672:6077044-6077466 JH977672:6077044-6077466]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eptFus1 plot eptFus1]
 |-
-| 197
+| 204
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]
@@ Line 2,685: / Line 2,881: @@
 | style='text-align:right'| 2842
 | style='text-align:right'| 2161091933
-| 526,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2&tanDups=pack&position=chr14:85222625-85223677 chr14:85222625-85223677]
+| 526,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2&tanDups=pack&gap=dense&position=chr14:85222625-85223677 chr14:85222625-85223677]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=equCab2 plot equCab2]
 |-
-| 198
+| 205
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1]
@@ Line 2,699: / Line 2,895: @@
 | style='text-align:right'| 107
 | style='text-align:right'| 801082402
-| 1923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1&tanDups=pack&position=KK950139:433764-437610 KK950139:433764-437610]
+| 1923,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1&tanDups=pack&gap=dense&position=KK950139:433764-437610 KK950139:433764-437610]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=equPrz1 plot equPrz1]
 |-
-| 199
+| 206
+| 2007
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur1 eriEur1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 406856
+| style='text-align:right'| 36
+| style='text-align:right'| 19671809
+| &nbsp;
+| style='text-align:right'| 3390
+| style='text-align:right'| 2085450281
+| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur1&tanDups=pack&gap=dense&position=scaffold_334489:6021-6625 scaffold_334489:6021-6625]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eriEur1 plot eriEur1]
+|-
+| 207
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]
@@ Line 2,713: / Line 2,923: @@
 | style='text-align:right'| 7216
 | style='text-align:right'| 6808639747
-| 13780,	5,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2&tanDups=pack&position=JH835378:10400-37964 JH835378:10400-37964]
+| 13780,	5,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2&tanDups=pack&gap=dense&position=JH835378:10400-37964 JH835378:10400-37964]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eriEur2 plot eriEur2]
 |-
-| 200
+| 208
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1]
@@ Line 2,727: / Line 2,937: @@
 | style='text-align:right'| 109
 | style='text-align:right'| 633934424
-| 1803,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1&tanDups=pack&position=KL593524:286555-290161 KL593524:286555-290161]
+| 1803,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1&tanDups=pack&gap=dense&position=KL593524:286555-290161 KL593524:286555-290161]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=esoLuc1 plot esoLuc1]
 |-
-| 201
+| 209
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=euaGli13 euaGli13]
@@ Line 2,741: / Line 2,951: @@
 | style='text-align:right'| 981
 | style='text-align:right'| 360128068
-| 95,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=euaGli13&tanDups=pack&position=4-7:24024058-24024248 4-7:24024058-24024248]
+| 95,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=euaGli13&tanDups=pack&gap=dense&position=4-7:24024058-24024248 4-7:24024058-24024248]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=euaGli13 plot euaGli13]
 |-
-| 202
+| 210
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1]
@@ Line 2,755: / Line 2,965: @@
 | style='text-align:right'| 3690
 | style='text-align:right'| 271468700
-| 462,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1&tanDups=pack&position=KK561721:27808-28732 KK561721:27808-28732]
+| 462,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1&tanDups=pack&gap=dense&position=KK561721:27808-28732 KK561721:27808-28732]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eurHel1 plot eurHel1]
 |-
-| 203
+| 211
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eutHer13 eutHer13]
@@ Line 2,769: / Line 2,979: @@
 | style='text-align:right'| 1220
 | style='text-align:right'| 345926827
-| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eutHer13&tanDups=pack&position=5-6:21163986-21164236 5-6:21163986-21164236]
+| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eutHer13&tanDups=pack&gap=dense&position=5-6:21163986-21164236 5-6:21163986-21164236]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=eutHer13 plot eutHer13]
 |-
-| 204
+| 212
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]
@@ Line 2,783: / Line 2,993: @@
 | style='text-align:right'| 144
 | style='text-align:right'| 71160661
-| 1589,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1&tanDups=pack&position=KB397979:787306-790484 KB397979:787306-790484]
+| 1589,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1&tanDups=pack&gap=dense&position=KB397979:787306-790484 KB397979:787306-790484]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=falChe1 plot falChe1]
 |-
-| 205
+| 213
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]
@@ Line 2,797: / Line 3,007: @@
 | style='text-align:right'| 156
 | style='text-align:right'| 69981752
-| 1888,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1&tanDups=pack&position=KB390863:6987566-6991342 KB390863:6987566-6991342]
+| 1888,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1&tanDups=pack&gap=dense&position=KB390863:6987566-6991342 KB390863:6987566-6991342]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=falPer1 plot falPer1]
 |-
-| 206
+| 214
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat1 felCat1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 403441
+| style='text-align:right'| 42
+| style='text-align:right'| 30873956
+| &nbsp;
+| style='text-align:right'| 930
+| style='text-align:right'| 1162418824
+| 482,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat1&tanDups=pack&gap=dense&position=scaffold_30190:390-1354 scaffold_30190:390-1354]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=felCat1 plot felCat1]
+|-
+| 215
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat3 felCat3]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 403441
+| style='text-align:right'| 42
+| style='text-align:right'| 30873956
+| &nbsp;
+| style='text-align:right'| 930
+| style='text-align:right'| 1162418824
+| 482,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat3&tanDups=pack&gap=dense&position=scaffold_30190:390-1354 scaffold_30190:390-1354]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=felCat3 plot felCat3]
+|-
+| 216
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat4 felCat4]
@@ Line 2,811: / Line 3,049: @@
 | style='text-align:right'| 3301
 | style='text-align:right'| 2364466223
-| 5373,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat4&tanDups=pack&position=chrA1:165589032-165599787 chrA1:165589032-165599787]
+| 5373,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat4&tanDups=pack&gap=dense&position=chrA1:165589032-165599787 chrA1:165589032-165599787]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=felCat4 plot felCat4]
 |-
-| 207
+| 217
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5]
@@ Line 2,825: / Line 3,063: @@
 | style='text-align:right'| 7873
 | style='text-align:right'| 3800500393
-| 238,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5&tanDups=pack&position=chrB2:9942275-9942751 chrB2:9942275-9942751]
+| 238,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5&tanDups=pack&gap=dense&position=chrB2:9942275-9942751 chrB2:9942275-9942751]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=felCat5 plot felCat5]
 |-
-| 208
+| 218
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]
@@ Line 2,839: / Line 3,077: @@
 | style='text-align:right'| 5064
 | style='text-align:right'| 4215814492
-| 482,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8&tanDups=pack&position=chrUn_AANG03063521v1:145-1109 chrUn_AANG03063521v1:145-1109]
+| 482,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8&tanDups=pack&gap=dense&position=chrUn_AANG03063521v1:145-1109 chrUn_AANG03063521v1:145-1109]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=felCat8 plot felCat8]
 |-
-| 209
+| 219
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr1 fr1]
@@ Line 2,853: / Line 3,091: @@
 | style='text-align:right'| 165
 | style='text-align:right'| 124234021
-| 304,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr1&tanDups=pack&position=chrUn:169005183-169005791 chrUn:169005183-169005791]
+| 304,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr1&tanDups=pack&gap=dense&position=chrUn:169005183-169005791 chrUn:169005183-169005791]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=fr1 plot fr1]
 |-
-| 210
+| 220
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr2 fr2]
@@ Line 2,867: / Line 3,105: @@
 | style='text-align:right'| 156
 | style='text-align:right'| 261084207
-| 151,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr2&tanDups=pack&position=chrUn:356162839-356163141 chrUn:356162839-356163141]
+| 151,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr2&tanDups=pack&gap=dense&position=chrUn:356162839-356163141 chrUn:356162839-356163141]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=fr2 plot fr2]
 |-
-| 211
+| 221
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]
@@ Line 2,881: / Line 3,119: @@
 | style='text-align:right'| 157
 | style='text-align:right'| 257018230
-| 151,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3&tanDups=pack&position=HE592488:202-504 HE592488:202-504]
+| 151,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3&tanDups=pack&gap=dense&position=HE592488:202-504 HE592488:202-504]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=fr3 plot fr3]
 |-
-| 212
+| 222
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1]
@@ Line 2,895: / Line 3,133: @@
 | style='text-align:right'| 93
 | style='text-align:right'| 36399474
-| 576,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1&tanDups=pack&position=KK595554:8470-9622 KK595554:8470-9622]
+| 576,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1&tanDups=pack&gap=dense&position=KK595554:8470-9622 KK595554:8470-9622]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=fulGla1 plot fulGla1]
 |-
-| 213
+| 223
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1 gadMor1]
@@ Line 2,909: / Line 3,147: @@
 | style='text-align:right'| 24
 | style='text-align:right'| 573821154
-| 131,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1&tanDups=pack&position=HE571852:62524-62786 HE571852:62524-62786]
+| 131,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1&tanDups=pack&gap=dense&position=HE571852:62524-62786 HE571852:62524-62786]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gadMor1 plot gadMor1]
 |-
-| 214
+| 224
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal2 galGal2]
@@ Line 2,923: / Line 3,161: @@
 | style='text-align:right'| 3723
 | style='text-align:right'| 846924205
-| 208,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal2&tanDups=pack&position=chr2:94743278-94743694 chr2:94743278-94743694]
+| 208,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal2&tanDups=pack&gap=dense&position=chr2:94743278-94743694 chr2:94743278-94743694]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=galGal2 plot galGal2]
 |-
-| 215
+| 225
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal3 galGal3]
@@ Line 2,937: / Line 3,175: @@
 | style='text-align:right'| 3004
 | style='text-align:right'| 1138149811
-| 208,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal3&tanDups=pack&position=chr2:97262115-97262531 chr2:97262115-97262531]
+| 208,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal3&tanDups=pack&gap=dense&position=chr2:97262115-97262531 chr2:97262115-97262531]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=galGal3 plot galGal3]
 |-
-| 216
+| 226
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]
@@ Line 2,951: / Line 3,189: @@
 | style='text-align:right'| 2968
 | style='text-align:right'| 493569103
-| 17591,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4&tanDups=pack&position=chrZ:21320544-21355741 chrZ:21320544-21355741]
+| 17591,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4&tanDups=pack&gap=dense&position=chrZ:21320544-21355741 chrZ:21320544-21355741]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=galGal4 plot galGal4]
 |-
-| 217
+| 227
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5]
@@ Line 2,965: / Line 3,203: @@
 | style='text-align:right'| 1925
 | style='text-align:right'| 3490824745
-| 17591,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5&tanDups=pack&position=chrZ:21461674-21496871 chrZ:21461674-21496871]
+| 17591,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5&tanDups=pack&gap=dense&position=chrZ:21461674-21496871 chrZ:21461674-21496871]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=galGal5 plot galGal5]
 |-
-| 218
+| 228
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]
@@ Line 2,979: / Line 3,217: @@
 | style='text-align:right'| 510
 | style='text-align:right'| 2494777971
-| 1998,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1&tanDups=pack&position=NW_007726895v1:52419-56415 NW_007726895v1:52419-56415]
+| 1998,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1&tanDups=pack&gap=dense&position=NW_007726895v1:52419-56415 NW_007726895v1:52419-56415]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=galVar1 plot galVar1]
 |-
-| 219
+| 229
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1 gasAcu1]
@@ Line 2,993: / Line 3,231: @@
 | style='text-align:right'| 3635
 | style='text-align:right'| 770629287
-| 296,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1&tanDups=pack&position=chrUn:59780312-59780904 chrUn:59780312-59780904]
+| 296,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1&tanDups=pack&gap=dense&position=chrUn:59780312-59780904 chrUn:59780312-59780904]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gasAcu1 plot gasAcu1]
 |-
-| 220
+| 230
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAsc0 gasAsc0]
@@ Line 3,007: / Line 3,245: @@
 | style='text-align:right'| 1417
 | style='text-align:right'| 518945407
-| 316,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAsc0&tanDups=pack&position=contig_16726:674-1306 contig_16726:674-1306]
+| 316,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAsc0&tanDups=pack&gap=dense&position=contig_16726:674-1306 contig_16726:674-1306]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gasAsc0 plot gasAsc0]
 |-
-| 221
+| 231
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavGan0 gavGan0]
@@ Line 3,021: / Line 3,259: @@
 | style='text-align:right'| 5005
 | style='text-align:right'| 732648585
-| 2263,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavGan0&tanDups=pack&position=scaffold7460:20241-24776 scaffold7460:20241-24776]
+| 2263,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavGan0&tanDups=pack&gap=dense&position=scaffold7460:20241-24776 scaffold7460:20241-24776]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gavGan0 plot gavGan0]
 |-
-| 222
+| 232
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1]
@@ Line 3,035: / Line 3,273: @@
 | style='text-align:right'| 75
 | style='text-align:right'| 47417993
-| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1&tanDups=pack&position=KK611813:2739-3343 KK611813:2739-3343]
+| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1&tanDups=pack&gap=dense&position=KK611813:2739-3343 KK611813:2739-3343]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gavSte1 plot gavSte1]
 |-
-| 223
+| 233
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]
@@ Line 3,049: / Line 3,287: @@
 | style='text-align:right'| 204
 | style='text-align:right'| 268468600
-| 1013,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1&tanDups=pack&position=JH739970:2776008-2778034 JH739970:2776008-2778034]
+| 1013,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1&tanDups=pack&gap=dense&position=JH739970:2776008-2778034 JH739970:2776008-2778034]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=geoFor1 plot geoFor1]
 |-
-| 224
+| 234
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gliRes13 gliRes13]
@@ Line 3,063: / Line 3,301: @@
 | style='text-align:right'| 1661
 | style='text-align:right'| 143989628
-| 95,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gliRes13&tanDups=pack&position=4-7:15697982-15698172 4-7:15697982-15698172]
+| 95,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gliRes13&tanDups=pack&gap=dense&position=4-7:15697982-15698172 4-7:15697982-15698172]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gliRes13 plot gliRes13]
 |-
-| 225
+| 235
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor1 gorGor1]
@@ Line 3,077: / Line 3,315: @@
 | style='text-align:right'| 1003
 | style='text-align:right'| 5481108486
-| 368,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor1&tanDups=pack&position=Supercontig_0046707:4946-5682 Supercontig_0046707:4946-5682]
+| 368,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor1&tanDups=pack&gap=dense&position=Supercontig_0046707:4946-5682 Supercontig_0046707:4946-5682]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gorGor1 plot gorGor1]
 |-
-| 226
+| 236
+| 2009
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor2 gorGor2]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 2199951
+| style='text-align:right'| 34
+| style='text-align:right'| 102221723
+| &nbsp;
+| style='text-align:right'| 1655
+| style='text-align:right'| 9056398920
+| 6680,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor2&tanDups=pack&gap=dense&position=chr11_104921458_1199196:710959-724328 chr11_104921458_1199196:710959-724328]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gorGor2 plot gorGor2]
+|-
+| 237
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor5 gorGor5]
@@ Line 3,091: / Line 3,343: @@
 | style='text-align:right'| 4102
 | style='text-align:right'| 21270991545
-| 338,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor5&tanDups=pack&position=CYUI01005848v1:13590-14266 CYUI01005848v1:13590-14266]
+| 338,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor5&tanDups=pack&gap=dense&position=CYUI01005848v1:13590-14266 CYUI01005848v1:13590-14266]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=gorGor5 plot gorGor5]
 |-
-| 227
+| 238
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon1 haeCon1]
@@ Line 3,105: / Line 3,357: @@
 | style='text-align:right'| 1251.5
 | style='text-align:right'| 319005845
-| 196,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon1&tanDups=pack&position=Hcon_Contig0025586:3955-4347 Hcon_Contig0025586:3955-4347]
+| 196,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon1&tanDups=pack&gap=dense&position=Hcon_Contig0025586:3955-4347 Hcon_Contig0025586:3955-4347]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=haeCon1 plot haeCon1]
 |-
-| 228
+| 239
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2 haeCon2]
@@ Line 3,119: / Line 3,371: @@
 | style='text-align:right'| 570
 | style='text-align:right'| 187299643
-| 2147,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2&tanDups=pack&position=scaffold_1557:10532-14826 scaffold_1557:10532-14826]
+| 2147,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2&tanDups=pack&gap=dense&position=scaffold_1557:10532-14826 scaffold_1557:10532-14826]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=haeCon2 plot haeCon2]
 |-
-| 229
+| 240
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1]
@@ Line 3,133: / Line 3,385: @@
 | style='text-align:right'| 301
 | style='text-align:right'| 41720730
-| 548,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1&tanDups=pack&position=KK653364:30569-31666 KK653364:30569-31666]
+| 548,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1&tanDups=pack&gap=dense&position=KK653364:30569-31666 KK653364:30569-31666]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=halAlb1 plot halAlb1]
 |-
-| 230
+| 241
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1]
@@ Line 3,147: / Line 3,399: @@
 | style='text-align:right'| 4586
 | style='text-align:right'| 98353830
-| 79,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1&tanDups=pack&position=KL869431:1084034-1084192 KL869431:1084034-1084192]
+| 79,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1&tanDups=pack&gap=dense&position=KL869431:1084034-1084192 KL869431:1084034-1084192]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=halLeu1 plot halLeu1]
 |-
-| 231
+| 242
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]
@@ Line 3,161: / Line 3,413: @@
 | style='text-align:right'| 3524.5
 | style='text-align:right'| 202958431
-| 10390,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1&tanDups=pack&position=JH425331:1373378-1394177 JH425331:1373378-1394177]
+| 10390,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1&tanDups=pack&gap=dense&position=JH425331:1373378-1394177 JH425331:1373378-1394177]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hapBur1 plot hapBur1]
 |-
-| 232
+| 243
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1 hetBac1]
@@ Line 3,175: / Line 3,427: @@
 | style='text-align:right'| 673
 | style='text-align:right'| 12041725
-| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1&tanDups=pack&position=GL996135v1:102345-102979 GL996135v1:102345-102979]
+| 317,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1&tanDups=pack&gap=dense&position=GL996135v1:102345-102979 GL996135v1:102345-102979]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hetBac1 plot hetBac1]
 |-
-| 233
+| 244
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla1 hetGla1]
@@ Line 3,189: / Line 3,441: @@
 | style='text-align:right'| 3329
 | style='text-align:right'| 1244942735
-| 3930,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla1&tanDups=pack&position=JH170644:110745-118605 JH170644:110745-118605]
+| 3930,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla1&tanDups=pack&gap=dense&position=JH170644:110745-118605 JH170644:110745-118605]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hetGla1 plot hetGla1]
 |-
-| 234
+| 245
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]
@@ Line 3,203: / Line 3,455: @@
 | style='text-align:right'| 6941
 | style='text-align:right'| 791605735
-| 158,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2&tanDups=pack&position=JH602100:6973404-6973720 JH602100:6973404-6973720]
+| 158,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2&tanDups=pack&gap=dense&position=JH602100:6973404-6973720 JH602100:6973404-6973720]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hetGla2 plot hetGla2]
 |-
-| 235
+| 246
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg19 hg19]
@@ Line 3,217: / Line 3,469: @@
 | style='text-align:right'| 7299
 | style='text-align:right'| 8376915441
-| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg19&tanDups=pack&position=chr13:80531634-80532084 chr13:80531634-80532084]
+| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg19&tanDups=pack&gap=dense&position=chr13:80531634-80532084 chr13:80531634-80532084]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hg19 plot hg19]
 |-
-| 236
+| 247
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]
@@ Line 3,231: / Line 3,483: @@
 | style='text-align:right'| 7485
 | style='text-align:right'| 11152418001
-| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38&tanDups=pack&position=chr13:79957499-79957949 chr13:79957499-79957949]
+| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38&tanDups=pack&gap=dense&position=chr13:79957499-79957949 chr13:79957499-79957949]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=hg38 plot hg38]
 |-
-| 237
+| 248
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homIni14 homIni14]
@@ Line 3,245: / Line 3,497: @@
 | style='text-align:right'| 7838
 | style='text-align:right'| 8265721353
-| 294,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homIni14&tanDups=pack&position=chr20:9839450-9840038 chr20:9839450-9840038]
+| 294,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homIni14&tanDups=pack&gap=dense&position=chr20:9839450-9840038 chr20:9839450-9840038]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=homIni14 plot homIni14]
 |-
-| 238
+| 249
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homNea0 homNea0]
@@ Line 3,259: / Line 3,511: @@
 | style='text-align:right'| 14.5
 | style='text-align:right'| 2669
-| 37,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homNea0&tanDups=pack&position=151586_3339_2553:20-94 151586_3339_2553:20-94]
+| 37,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homNea0&tanDups=pack&gap=dense&position=151586_3339_2553:20-94 151586_3339_2553:20-94]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=homNea0 plot homNea0]
 |-
-| 240
+| 251
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]
@@ Line 3,273: / Line 3,525: @@
 | style='text-align:right'| 6295
 | style='text-align:right'| 3230508925
-| 276,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1&tanDups=pack&position=JH725590:3244288-3244840 JH725590:3244288-3244840]
+| 276,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1&tanDups=pack&gap=dense&position=JH725590:3244288-3244840 JH725590:3244288-3244840]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=jacJac1 plot jacJac1]
 |-
-| 241
+| 252
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]
@@ Line 3,287: / Line 3,539: @@
 | style='text-align:right'| 1038
 | style='text-align:right'| 1285603914
-| 182,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1&tanDups=pack&position=JH128998:42125-42489 JH128998:42125-42489]
+| 182,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1&tanDups=pack&gap=dense&position=JH128998:42125-42489 JH128998:42125-42489]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=latCha1 plot latCha1]
 |-
-| 242
+| 253
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lauRas13 lauRas13]
@@ Line 3,301: / Line 3,553: @@
 | style='text-align:right'| 1493
 | style='text-align:right'| 210427636
-| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lauRas13&tanDups=pack&position=5-6:22761072-22761322 5-6:22761072-22761322]
+| 125,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lauRas13&tanDups=pack&gap=dense&position=5-6:22761072-22761322 5-6:22761072-22761322]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=lauRas13 plot lauRas13]
 |-
-| 243
+| 254
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1]
@@ Line 3,315: / Line 3,567: @@
 | style='text-align:right'| 94
 | style='text-align:right'| 31438992
-| 199,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1&tanDups=pack&position=JJRK01010260:4452-4850 JJRK01010260:4452-4850]
+| 199,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1&tanDups=pack&gap=dense&position=JJRK01010260:4452-4850 JJRK01010260:4452-4850]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=lepDis1 plot lepDis1]
 |-
-| 244
+| 255
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]
@@ Line 3,329: / Line 3,581: @@
 | style='text-align:right'| 1084
 | style='text-align:right'| 350156295
-| 488,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1&tanDups=pack&position=chrLG5:14840992-14841969 chrLG5:14840992-14841969]
+| 488,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1&tanDups=pack&gap=dense&position=chrLG5:14840992-14841969 chrLG5:14840992-14841969]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=lepOcu1 plot lepOcu1]
 |-
-| 245
+| 256
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1 lepWed1]
@@ Line 3,343: / Line 3,595: @@
 | style='text-align:right'| 7787
 | style='text-align:right'| 2911858141
-| 168,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1&tanDups=pack&position=KB716722:387801-388137 KB716722:387801-388137]
+| 168,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1&tanDups=pack&gap=dense&position=KB716722:387801-388137 KB716722:387801-388137]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=lepWed1 plot lepWed1]
 |-
-| 246
+| 257
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=letCam1 letCam1]
@@ Line 3,357: / Line 3,609: @@
 | style='text-align:right'| 153
 | style='text-align:right'| 1525909318
-| 207,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=letCam1&tanDups=pack&position=KE997215:997-1411 KE997215:997-1411]
+| 207,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=letCam1&tanDups=pack&gap=dense&position=KE997215:997-1411 KE997215:997-1411]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=letCam1 plot letCam1]
 |-
-| 247
+| 258
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=linHum0 linHum0]
@@ Line 3,371: / Line 3,623: @@
 | style='text-align:right'| 5018
 | style='text-align:right'| 259661061
-| 101,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=linHum0&tanDups=pack&position=NW_012160424:64875-65077 NW_012160424:64875-65077]
+| 101,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=linHum0&tanDups=pack&gap=dense&position=NW_012160424:64875-65077 NW_012160424:64875-65077]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=linHum0 plot linHum0]
 |-
-| 248
+| 259
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lipVex1 lipVex1]
@@ Line 3,385: / Line 3,637: @@
 | style='text-align:right'| 8421
 | style='text-align:right'| 4503138248
-| 6076,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lipVex1&tanDups=pack&position=KE559913:905157-917309 KE559913:905157-917309]
+| 6076,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lipVex1&tanDups=pack&gap=dense&position=KE559913:905157-917309 KE559913:905157-917309]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=lipVex1 plot lipVex1]
 |-
-| 249
+| 260
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1 loaLoa1]
@@ Line 3,399: / Line 3,651: @@
 | style='text-align:right'| 188
 | style='text-align:right'| 16478676
-| 109,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1&tanDups=pack&position=JH717180v1:404-622 JH717180v1:404-622]
+| 109,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1&tanDups=pack&gap=dense&position=JH717180v1:404-622 JH717180v1:404-622]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=loaLoa1 plot loaLoa1]
 |-
-| 250
+| 261
-| 2009
+| 2005
-| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr1 loxAfr1]
-| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 357658
+| style='text-align:right'| 40
+| style='text-align:right'| 19137870
+| &nbsp;
+| style='text-align:right'| 2747
+| style='text-align:right'| 1623517964
+| 191,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr1&tanDups=pack&gap=dense&position=scaffold_68013:5261-5643 scaffold_68013:5261-5643]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=loxAfr1 plot loxAfr1]
+|-
+| 262
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr2 loxAfr2]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 452605
+| style='text-align:right'| 42
+| style='text-align:right'| 26444359
+| &nbsp;
+| style='text-align:right'| 3136
+| style='text-align:right'| 2138902576
+| 191,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr2&tanDups=pack&gap=dense&position=scaffold_2221:111993-112375 scaffold_2221:111993-112375]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=loxAfr2 plot loxAfr2]
+|-
+| 263
+| 2009
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1]
 | tbd
 | style='text-align:right'| 417305
@@ Line 3,413: / Line 3,693: @@
 | style='text-align:right'| 7538
 | style='text-align:right'| 3438092453
-| 223,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3&tanDups=pack&position=scaffold_12:19769054-19769500 scaffold_12:19769054-19769500]
+| 223,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3&tanDups=pack&gap=dense&position=scaffold_12:19769054-19769500 scaffold_12:19769054-19769500]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=loxAfr3 plot loxAfr3]
 |-
-| 251
+| 264
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug1 macEug1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 165545
+| style='text-align:right'| 37
+| style='text-align:right'| 7960226
+| &nbsp;
+| style='text-align:right'| 131
+| style='text-align:right'| 298753576
+| 227,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug1&tanDups=pack&gap=dense&position=Scaffold4099:16828-17282 Scaffold4099:16828-17282]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=macEug1 plot macEug1]
+|-
+| 265
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]
@@ Line 3,427: / Line 3,721: @@
 | style='text-align:right'| 242
 | style='text-align:right'| 580939886
-| 216,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2&tanDups=pack&position=GL085287:42394-42826 GL085287:42394-42826]
+| 216,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2&tanDups=pack&gap=dense&position=GL085287:42394-42826 GL085287:42394-42826]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=macEug2 plot macEug2]
 |-
-| 252
+| 266
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]
@@ Line 3,441: / Line 3,735: @@
 | style='text-align:right'| 5488
 | style='text-align:right'| 8623449917
-| 215,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5&tanDups=pack&position=chr12:93264384-93264814 chr12:93264384-93264814]
+| 215,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5&tanDups=pack&gap=dense&position=chr12:93264384-93264814 chr12:93264384-93264814]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=macFas5 plot macFas5]
 |-
-| 253
+| 267
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macNem1 macNem1]
@@ Line 3,455: / Line 3,749: @@
 | style='text-align:right'| 5927
 | style='text-align:right'| 6575951123
-| 2580,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macNem1&tanDups=pack&position=NW_012015577v1:7214313-7219476 NW_012015577v1:7214313-7219476]
+| 2580,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macNem1&tanDups=pack&gap=dense&position=NW_012015577v1:7214313-7219476 NW_012015577v1:7214313-7219476]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=macNem1 plot macNem1]
 |-
-| 254
+| 268
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manPen1 manPen1]
@@ Line 3,469: / Line 3,763: @@
 | style='text-align:right'| 853
 | style='text-align:right'| 887951462
-| 4944,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manPen1&tanDups=pack&position=KN012191:2418-12306 KN012191:2418-12306]
+| 4944,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manPen1&tanDups=pack&gap=dense&position=KN012191:2418-12306 KN012191:2418-12306]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=manPen1 plot manPen1]
 |-
-| 255
+| 269
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1]
@@ Line 3,483: / Line 3,777: @@
 | style='text-align:right'| 206
 | style='text-align:right'| 245456943
-| 5268,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1&tanDups=pack&position=KK733349:4046063-4056599 KK733349:4046063-4056599]
+| 5268,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1&tanDups=pack&gap=dense&position=KK733349:4046063-4056599 KK733349:4046063-4056599]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=manVit1 plot manVit1]
 |-
-| 257
+| 271
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]
@@ Line 3,497: / Line 3,791: @@
 | style='text-align:right'| 4159
 | style='text-align:right'| 307830483
-| 9605,	105,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1&tanDups=pack&position=JH720664:938440-957754 JH720664:938440-957754]
+| 9605,	105,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1&tanDups=pack&gap=dense&position=JH720664:938440-957754 JH720664:938440-957754]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mayZeb1 plot mayZeb1]
 |-
-| 258
+| 272
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1 megLyr1]
@@ Line 3,511: / Line 3,805: @@
 | style='text-align:right'| 112
 | style='text-align:right'| 35852812
-| 149,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1&tanDups=pack&position=KI041466:2479-2777 KI041466:2479-2777]
+| 149,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1&tanDups=pack&gap=dense&position=KI041466:2479-2777 KI041466:2479-2777]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=megLyr1 plot megLyr1]
 |-
-| 259
+| 273
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]
@@ Line 3,525: / Line 3,819: @@
 | style='text-align:right'| 2825
 | style='text-align:right'| 133788059
-| 169,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1&tanDups=pack&position=chr3:54352580-54352918 chr3:54352580-54352918]
+| 169,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1&tanDups=pack&gap=dense&position=chr3:54352580-54352918 chr3:54352580-54352918]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melGal1 plot melGal1]
 |-
-| 260
+| 274
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal5 melGal5]
@@ Line 3,539: / Line 3,833: @@
 | style='text-align:right'| 197
 | style='text-align:right'| 188019328
-| 173,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal5&tanDups=pack&position=chrUn_NW_011217171v1:1-347 chrUn_NW_011217171v1:1-347]
+| 173,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal5&tanDups=pack&gap=dense&position=chrUn_NW_011217171v1:1-347 chrUn_NW_011217171v1:1-347]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melGal5 plot melGal5]
 |-
-| 261
+| 275
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1 melHap1]
@@ Line 3,553: / Line 3,847: @@
 | style='text-align:right'| 375
 | style='text-align:right'| 21806223
-| 157,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1&tanDups=pack&position=MhA1_Contig2844:850-1164 MhA1_Contig2844:850-1164]
+| 157,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1&tanDups=pack&gap=dense&position=MhA1_Contig2844:850-1164 MhA1_Contig2844:850-1164]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melHap1 plot melHap1]
 |-
-| 262
+| 276
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc1 melInc1]
@@ Line 3,567: / Line 3,861: @@
 | style='text-align:right'| 558
 | style='text-align:right'| 47252172
-| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc1&tanDups=pack&position=Minc_Contig6373:3669-4035 Minc_Contig6373:3669-4035]
+| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc1&tanDups=pack&gap=dense&position=Minc_Contig6373:3669-4035 Minc_Contig6373:3669-4035]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melInc1 plot melInc1]
 |-
-| 263
+| 277
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2 melInc2]
@@ Line 3,581: / Line 3,875: @@
 | style='text-align:right'| 1067
 | style='text-align:right'| 83086394
-| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2&tanDups=pack&position=MiV1ctg2756:3669-4035 MiV1ctg2756:3669-4035]
+| 183,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2&tanDups=pack&gap=dense&position=MiV1ctg2756:3669-4035 MiV1ctg2756:3669-4035]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melInc2 plot melInc2]
 |-
-| 264
+| 278
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]
@@ Line 3,595: / Line 3,889: @@
 | style='text-align:right'| 6271
 | style='text-align:right'| 754338919
-| 120,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1&tanDups=pack&position=JH556605:5210251-5210491 JH556605:5210251-5210491]
+| 120,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1&tanDups=pack&gap=dense&position=JH556605:5210251-5210491 JH556605:5210251-5210491]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=melUnd1 plot melUnd1]
 |-
-| 265
+| 279
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1]
@@ Line 3,609: / Line 3,903: @@
 | style='text-align:right'| 174
 | style='text-align:right'| 103616988
-| 543,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1&tanDups=pack&position=KK705997:21022-22108 KK705997:21022-22108]
+| 543,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1&tanDups=pack&gap=dense&position=KK705997:21022-22108 KK705997:21022-22108]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=merNub1 plot merNub1]
 |-
-| 266
+| 280
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]
@@ Line 3,623: / Line 3,917: @@
 | style='text-align:right'| 3099
 | style='text-align:right'| 1465851012
-| 529,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1&tanDups=pack&position=KB708261:1360324-1361383 KB708261:1360324-1361383]
+| 529,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1&tanDups=pack&gap=dense&position=KB708261:1360324-1361383 KB708261:1360324-1361383]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mesAur1 plot mesAur1]
 |-
-| 267
+| 281
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1]
@@ Line 3,637: / Line 3,931: @@
 | style='text-align:right'| 257
 | style='text-align:right'| 120590969
-| 271,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1&tanDups=pack&position=JJRI01098248:16372-16914 JJRI01098248:16372-16914]
+| 271,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1&tanDups=pack&gap=dense&position=JJRI01098248:16372-16914 JJRI01098248:16372-16914]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mesUni1 plot mesUni1]
 |-
-| 268
+| 282
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur0 micMur0]
@@ Line 3,651: / Line 3,945: @@
 | style='text-align:right'| 3493
 | style='text-align:right'| 1863320468
-| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur0&tanDups=pack&position=scaffold_11535:27481-28085 scaffold_11535:27481-28085]
+| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur0&tanDups=pack&gap=dense&position=scaffold_11535:27481-28085 scaffold_11535:27481-28085]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=micMur0 plot micMur0]
 |-
-| 269
+| 283
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1 micMur1]
@@ Line 3,665: / Line 3,959: @@
 | style='text-align:right'| 3194
 | style='text-align:right'| 1669326577
-| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1&tanDups=pack&position=scaffold_11535:27481-28085 scaffold_11535:27481-28085]
+| 302,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1&tanDups=pack&gap=dense&position=scaffold_11535:27481-28085 scaffold_11535:27481-28085]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=micMur1 plot micMur1]
 |-
-| 270
+| 284
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2 micMur2]
@@ Line 3,679: / Line 3,973: @@
 | style='text-align:right'| 7563
 | style='text-align:right'| 8957944918
-| 3388,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2&tanDups=pack&position=KQ058422v1:91440-98218 KQ058422v1:91440-98218]
+| 3388,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2&tanDups=pack&gap=dense&position=KQ058422v1:91440-98218 KQ058422v1:91440-98218]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=micMur2 plot micMur2]
 |-
-| 271
+| 285
 | 2017
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur3 micMur3]
@@ Line 3,693: / Line 3,987: @@
 | style='text-align:right'| 7729
 | style='text-align:right'| 9630726519
-| 185,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur3&tanDups=pack&position=chr5:43933509-43933879 chr5:43933509-43933879]
+| 185,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur3&tanDups=pack&gap=dense&position=chr5:43933509-43933879 chr5:43933509-43933879]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=micMur3 plot micMur3]
 |-
-| 272
+| 286
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]
@@ Line 3,707: / Line 4,001: @@
 | style='text-align:right'| 2433
 | style='text-align:right'| 1838809952
-| 278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1&tanDups=pack&position=chrLG5:33413026-33413582 chrLG5:33413026-33413582]
+| 278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1&tanDups=pack&gap=dense&position=chrLG5:33413026-33413582 chrLG5:33413026-33413582]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=micOch1 plot micOch1]
 |-
-| 273
+| 287
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm5 mm5]
@@ Line 3,721: / Line 4,015: @@
 | style='text-align:right'| 5464
 | style='text-align:right'| 5947046883
-| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm5&tanDups=pack&position=chr11:108081652-108082650 chr11:108081652-108082650]
+| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm5&tanDups=pack&gap=dense&position=chr11:108081652-108082650 chr11:108081652-108082650]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mm5 plot mm5]
 |-
-| 274
+| 288
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm6 mm6]
@@ Line 3,735: / Line 4,029: @@
 | style='text-align:right'| 5669
 | style='text-align:right'| 6168390266
-| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm6&tanDups=pack&position=chr11:108231617-108232615 chr11:108231617-108232615]
+| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm6&tanDups=pack&gap=dense&position=chr11:108231617-108232615 chr11:108231617-108232615]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mm6 plot mm6]
 |-
-| 275
+| 289
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm7 mm7]
@@ Line 3,749: / Line 4,043: @@
 | style='text-align:right'| 6053
 | style='text-align:right'| 5781640680
-| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm7&tanDups=pack&position=chr11:108519568-108520566 chr11:108519568-108520566]
+| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm7&tanDups=pack&gap=dense&position=chr11:108519568-108520566 chr11:108519568-108520566]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mm7 plot mm7]
 |-
-| 276
+| 290
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm8 mm8]
@@ Line 3,763: / Line 4,057: @@
 | style='text-align:right'| 6175
 | style='text-align:right'| 5992918402
-| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm8&tanDups=pack&position=chr11:108226617-108227615 chr11:108226617-108227615]
+| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm8&tanDups=pack&gap=dense&position=chr11:108226617-108227615 chr11:108226617-108227615]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mm8 plot mm8]
 |-
-| 277
+| 291
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm9 mm9]
@@ Line 3,777: / Line 4,071: @@
 | style='text-align:right'| 6202
 | style='text-align:right'| 6169636600
-| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm9&tanDups=pack&position=chr11:108271841-108272839 chr11:108271841-108272839]
+| 499,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm9&tanDups=pack&gap=dense&position=chr11:108271841-108272839 chr11:108271841-108272839]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=mm9 plot mm9]
 |-
-| 278
+| 292
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom1 monDom1]
@@ Line 3,791: / Line 4,085: @@
 | style='text-align:right'| 4462
 | style='text-align:right'| 3384507689
-| 487,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom1&tanDups=pack&position=scaffold_14964:3383335-3384309 scaffold_14964:3383335-3384309]
+| 487,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom1&tanDups=pack&gap=dense&position=scaffold_14964:3383335-3384309 scaffold_14964:3383335-3384309]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=monDom1 plot monDom1]
 |-
-| 279
+| 293
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom2 monDom2]
@@ Line 3,805: / Line 4,099: @@
 | style='text-align:right'| 4132
 | style='text-align:right'| 4182097432
-| 685,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom2&tanDups=pack&position=scaffold_47:13428470-13429840 scaffold_47:13428470-13429840]
+| 685,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom2&tanDups=pack&gap=dense&position=scaffold_47:13428470-13429840 scaffold_47:13428470-13429840]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=monDom2 plot monDom2]
 |-
-| 280
+| 294
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musDom2 musDom2]
@@ Line 3,819: / Line 4,113: @@
 | style='text-align:right'| 1941
 | style='text-align:right'| 2513509860
-| 2028,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musDom2&tanDups=pack&position=KB856326:64184-68240 KB856326:64184-68240]
+| 2028,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musDom2&tanDups=pack&gap=dense&position=KB856326:64184-68240 KB856326:64184-68240]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=musDom2 plot musDom2]
 |-
-| 281
+| 295
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1 musFur1]
@@ Line 3,833: / Line 4,127: @@
 | style='text-align:right'| 8370
 | style='text-align:right'| 2709245222
-| 446,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1&tanDups=pack&position=GL896951:5218180-5219072 GL896951:5218180-5219072]
+| 446,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1&tanDups=pack&gap=dense&position=GL896951:5218180-5219072 GL896951:5218180-5219072]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=musFur1 plot musFur1]
 |-
-| 282
+| 296
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoBra1 myoBra1]
@@ Line 3,847: / Line 4,141: @@
 | style='text-align:right'| 1070
 | style='text-align:right'| 2100859228
-| 3719,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoBra1&tanDups=pack&position=KE163224:7566116-7573554 KE163224:7566116-7573554]
+| 3719,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoBra1&tanDups=pack&gap=dense&position=KE163224:7566116-7573554 KE163224:7566116-7573554]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=myoBra1 plot myoBra1]
 |-
-| 283
+| 297
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1 myoDav1]
@@ Line 3,861: / Line 4,155: @@
 | style='text-align:right'| 2186
 | style='text-align:right'| 1562115676
-| 595,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1&tanDups=pack&position=KB109238:3742816-3744006 KB109238:3742816-3744006]
+| 595,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1&tanDups=pack&gap=dense&position=KB109238:3742816-3744006 KB109238:3742816-3744006]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=myoDav1 plot myoDav1]
 |-
-| 284
+| 298
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc1 myoLuc1]
@@ Line 3,875: / Line 4,169: @@
 | style='text-align:right'| 2605
 | style='text-align:right'| 1175238045
-| 253,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc1&tanDups=pack&position=scaffold_116983:3336-3842 scaffold_116983:3336-3842]
+| 253,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc1&tanDups=pack&gap=dense&position=scaffold_116983:3336-3842 scaffold_116983:3336-3842]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=myoLuc1 plot myoLuc1]
 |-
-| 285
+| 299
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]
@@ Line 3,889: / Line 4,183: @@
 | style='text-align:right'| 5420
 | style='text-align:right'| 2827568613
-| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2&tanDups=pack&position=GL430179:150290-150914 GL430179:150290-150914]
+| 312,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2&tanDups=pack&gap=dense&position=GL430179:150290-150914 GL430179:150290-150914]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=myoLuc2 plot myoLuc2]
 |-
-| 286
+| 300
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanGal1 nanGal1]
@@ Line 3,903: / Line 4,197: @@
 | style='text-align:right'| 3120.5
 | style='text-align:right'| 3348487653
-| 767,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanGal1&tanDups=pack&position=KL200570:476406-477940 KL200570:476406-477940]
+| 767,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanGal1&tanDups=pack&gap=dense&position=KL200570:476406-477940 KL200570:476406-477940]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nanGal1 plot nanGal1]
 |-
-| 287
+| 301
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1 nanPar1]
@@ Line 3,917: / Line 4,211: @@
 | style='text-align:right'| 248
 | style='text-align:right'| 1815148366
-| 7565,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1&tanDups=pack&position=KN905954v1:74233-89363 KN905954v1:74233-89363]
+| 7565,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1&tanDups=pack&gap=dense&position=KN905954v1:74233-89363 KN905954v1:74233-89363]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nanPar1 plot nanPar1]
 |-
-| 288
+| 302
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nasLar1 nasLar1]
@@ Line 3,931: / Line 4,225: @@
 | style='text-align:right'| 5276
 | style='text-align:right'| 1979226063
-| 5956,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nasLar1&tanDups=pack&position=chrX:51509450-51521363 chrX:51509450-51521363]
+| 5956,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nasLar1&tanDups=pack&gap=dense&position=chrX:51509450-51521363 chrX:51509450-51521363]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nasLar1 plot nasLar1]
 |-
-| 289
+| 303
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1 necAme1]
@@ Line 3,945: / Line 4,239: @@
 | style='text-align:right'| 1580
 | style='text-align:right'| 123448969
-| 93,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1&tanDups=pack&position=KI659398v1:132-318 KI659398v1:132-318]
+| 93,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1&tanDups=pack&gap=dense&position=KI659398v1:132-318 KI659398v1:132-318]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=necAme1 plot necAme1]
 |-
-| 290
+| 304
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nemVec1 nemVec1]
@@ Line 3,959: / Line 4,253: @@
 | style='text-align:right'| 589
 | style='text-align:right'| 1501673463
-| 353,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nemVec1&tanDups=pack&position=scaffold_201:423580-424286 scaffold_201:423580-424286]
+| 353,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nemVec1&tanDups=pack&gap=dense&position=scaffold_201:423580-424286 scaffold_201:423580-424286]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nemVec1 plot nemVec1]
 |-
-| 291
+| 305
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]
@@ Line 3,973: / Line 4,267: @@
 | style='text-align:right'| 1655
 | style='text-align:right'| 274117853
-| 8242,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1&tanDups=pack&position=JH422273:8382583-8399086 JH422273:8382583-8399086]
+| 8242,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1&tanDups=pack&gap=dense&position=JH422273:8382583-8399086 JH422273:8382583-8399086]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=neoBri1 plot neoBri1]
 |-
-| 292
+| 306
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1]
@@ Line 3,987: / Line 4,281: @@
 | style='text-align:right'| 251
 | style='text-align:right'| 104452416
-| 1496,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1&tanDups=pack&position=KL409846:432608-435600 KL409846:432608-435600]
+| 1496,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1&tanDups=pack&gap=dense&position=KL409846:432608-435600 KL409846:432608-435600]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nipNip1 plot nipNip1]
 |-
-| 293
+| 307
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu1 nomLeu1]
@@ Line 4,001: / Line 4,295: @@
 | style='text-align:right'| 2770
 | style='text-align:right'| 8727221218
-| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu1&tanDups=pack&position=GL397370:1321325-1322179 GL397370:1321325-1322179]
+| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu1&tanDups=pack&gap=dense&position=GL397370:1321325-1322179 GL397370:1321325-1322179]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nomLeu1 plot nomLeu1]
 |-
-| 294
+| 308
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu2 nomLeu2]
@@ Line 4,015: / Line 4,309: @@
 | style='text-align:right'| 2770
 | style='text-align:right'| 8727221218
-| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu2&tanDups=pack&position=GL397370:1321325-1322179 GL397370:1321325-1322179]
+| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu2&tanDups=pack&gap=dense&position=GL397370:1321325-1322179 GL397370:1321325-1322179]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nomLeu2 plot nomLeu2]
 |-
-| 295
+| 309
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3]
@@ Line 4,029: / Line 4,323: @@
 | style='text-align:right'| 2776
 | style='text-align:right'| 8748833073
-| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3&tanDups=pack&position=chr17:28153188-28154042 chr17:28153188-28154042]
+| 427,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3&tanDups=pack&gap=dense&position=chr17:28153188-28154042 chr17:28153188-28154042]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=nomLeu3 plot nomLeu3]
 |-
-| 296
+| 310
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1]
@@ Line 4,043: / Line 4,337: @@
 | style='text-align:right'| 199
 | style='text-align:right'| 393266432
-| 407,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1&tanDups=pack&position=KL665414:596304-597118 KL665414:596304-597118]
+| 407,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1&tanDups=pack&gap=dense&position=KL665414:596304-597118 KL665414:596304-597118]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=notCor1 plot notCor1]
 |-
-| 297
+| 311
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri0 ochPri0]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 1112332
+| style='text-align:right'| 39
+| style='text-align:right'| 56228146
+| &nbsp;
+| style='text-align:right'| 978
+| style='text-align:right'| 3230892899
+| 340,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri0&tanDups=pack&gap=dense&position=scaffold_108746:3869-4549 scaffold_108746:3869-4549]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ochPri0 plot ochPri0]
+|-
+| 312
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2 ochPri2]
@@ Line 4,057: / Line 4,365: @@
 | style='text-align:right'| 967
 | style='text-align:right'| 3107510489
-| 340,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2&tanDups=pack&position=scaffold_108746:3869-4549 scaffold_108746:3869-4549]
+| 340,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2&tanDups=pack&gap=dense&position=scaffold_108746:3869-4549 scaffold_108746:3869-4549]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ochPri2 plot ochPri2]
 |-
-| 298
+| 313
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]
@@ Line 4,071: / Line 4,379: @@
 | style='text-align:right'| 6664
 | style='text-align:right'| 2042363947
-| 5916,	11,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3&tanDups=pack&position=JH802070:23930294-23942136 JH802070:23930294-23942136]
+| 5916,	11,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3&tanDups=pack&gap=dense&position=JH802070:23930294-23942136 JH802070:23930294-23942136]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ochPri3 plot ochPri3]
 |-
-| 299
+| 314
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]
@@ Line 4,085: / Line 4,393: @@
 | style='text-align:right'| 6219
 | style='text-align:right'| 2321422433
-| 538,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1&tanDups=pack&position=JH651588:2148235-2149311 JH651588:2148235-2149311]
+| 538,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1&tanDups=pack&gap=dense&position=JH651588:2148235-2149311 JH651588:2148235-2149311]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=octDeg1 plot octDeg1]
 |-
-| 300
+| 315
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]
@@ Line 4,099: / Line 4,407: @@
 | style='text-align:right'| 7248
 | style='text-align:right'| 3092233269
-| 336,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1&tanDups=pack&position=KB228946:1914846-1915518 KB228946:1914846-1915518]
+| 336,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1&tanDups=pack&gap=dense&position=KB228946:1914846-1915518 KB228946:1914846-1915518]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=odoRosDiv1 plot odoRosDiv1]
 |-
-| 301
+| 316
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1 oncVol1]
@@ Line 4,113: / Line 4,421: @@
 | style='text-align:right'| 2124
 | style='text-align:right'| 28089581
-| 739,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1&tanDups=pack&position=HG738137v1:12037947-12039425 HG738137v1:12037947-12039425]
+| 739,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1&tanDups=pack&gap=dense&position=HG738137v1:12037947-12039425 HG738137v1:12037947-12039425]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oncVol1 plot oncVol1]
 |-
-| 302
+| 317
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1]
@@ Line 4,127: / Line 4,435: @@
 | style='text-align:right'| 4083
 | style='text-align:right'| 456471575
-| 1119,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1&tanDups=pack&position=KK734928:246587-248825 KK734928:246587-248825]
+| 1119,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1&tanDups=pack&gap=dense&position=KK734928:246587-248825 KK734928:246587-248825]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=opiHoa1 plot opiHoa1]
 |-
-| 303
+| 318
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1 orcOrc1]
@@ Line 4,141: / Line 4,449: @@
 | style='text-align:right'| 8151
 | style='text-align:right'| 3040130649
-| 4550,	14,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1&tanDups=pack&position=NW_004438537v1:3574224-3583337 NW_004438537v1:3574224-3583337]
+| 4550,	14,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1&tanDups=pack&gap=dense&position=NW_004438537v1:3574224-3583337 NW_004438537v1:3574224-3583337]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=orcOrc1 plot orcOrc1]
 |-
-| 304
+| 319
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil1 oreNil1]
@@ Line 4,155: / Line 4,463: @@
 | style='text-align:right'| 6067
 | style='text-align:right'| 586359236
-| 9755,	32,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil1&tanDups=pack&position=GL831139:3510855-3530396 GL831139:3510855-3530396]
+| 9755,	32,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil1&tanDups=pack&gap=dense&position=GL831139:3510855-3530396 GL831139:3510855-3530396]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oreNil1 plot oreNil1]
 |-
-| 305
+| 320
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]
@@ Line 4,169: / Line 4,477: @@
 | style='text-align:right'| 2857
 | style='text-align:right'| 4750437899
-| 279,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1&tanDups=pack&position=Contig10711:4568-5126 Contig10711:4568-5126]
+| 279,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1&tanDups=pack&gap=dense&position=Contig10711:4568-5126 Contig10711:4568-5126]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ornAna1 plot ornAna1]
 |-
-| 306
+| 321
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2]
@@ Line 4,183: / Line 4,491: @@
 | style='text-align:right'| 2857
 | style='text-align:right'| 4750437899
-| 279,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2&tanDups=pack&position=chrUn_DS187984v1:4568-5126 chrUn_DS187984v1:4568-5126]
+| 279,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2&tanDups=pack&gap=dense&position=chrUn_DS187984v1:4568-5126 chrUn_DS187984v1:4568-5126]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ornAna2 plot ornAna2]
 |-
-| 307
+| 322
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1]
+| allpaths v. R40776 LITTLE_HELPS_BIG=False
+| style='text-align:right'| 723185
+| style='text-align:right'| 34
+| style='text-align:right'| 29823049
+| &nbsp;
+| style='text-align:right'| 7910
+| style='text-align:right'| 6135084152
+| 201,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1&tanDups=pack&gap=dense&position=JH863815:9524393-9524795 JH863815:9524393-9524795]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oryAfe1 plot oryAfe1]
+|-
+| 323
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun1 oryCun1]
@@ Line 4,197: / Line 4,519: @@
 | style='text-align:right'| 1631
 | style='text-align:right'| 1966576432
-| 355,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun1&tanDups=pack&position=scaffold_215240:74823-75533 scaffold_215240:74823-75533]
+| 355,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun1&tanDups=pack&gap=dense&position=scaffold_215240:74823-75533 scaffold_215240:74823-75533]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oryCun1 plot oryCun1]
 |-
-| 308
+| 324
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]
@@ Line 4,211: / Line 4,533: @@
 | style='text-align:right'| 7982
 | style='text-align:right'| 8671655620
-| 355,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2&tanDups=pack&position=chrX:61423000-61423710 chrX:61423000-61423710]
+| 355,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2&tanDups=pack&gap=dense&position=chrX:61423000-61423710 chrX:61423000-61423710]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oryCun2 plot oryCun2]
 |-
-| 309
+| 325
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat1 oryLat1]
@@ Line 4,225: / Line 4,547: @@
 | style='text-align:right'| 1210
 | style='text-align:right'| 620191379
-| 379,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat1&tanDups=pack&position=chr9:5041681-5042439 chr9:5041681-5042439]
+| 379,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat1&tanDups=pack&gap=dense&position=chr9:5041681-5042439 chr9:5041681-5042439]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oryLat1 plot oryLat1]
 |-
-| 310
+| 326
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2 oryLat2]
@@ Line 4,239: / Line 4,561: @@
 | style='text-align:right'| 1234
 | style='text-align:right'| 592910738
-| 379,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2&tanDups=pack&position=chr9:5041681-5042439 chr9:5041681-5042439]
+| 379,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2&tanDups=pack&gap=dense&position=chr9:5041681-5042439 chr9:5041681-5042439]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oryLat2 plot oryLat2]
 |-
-| 311
+| 327
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar1 otoGar1]
@@ Line 4,253: / Line 4,575: @@
 | style='text-align:right'| 3169
 | style='text-align:right'| 1564679906
-| 371,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar1&tanDups=pack&position=scaffold_95742.1-347136:293478-294220 scaffold_95742.1-347136:293478-294220]
+| 371,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar1&tanDups=pack&gap=dense&position=scaffold_95742.1-347136:293478-294220 scaffold_95742.1-347136:293478-294220]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=otoGar1 plot otoGar1]
 |-
-| 312
+| 328
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]
@@ Line 4,267: / Line 4,589: @@
 | style='text-align:right'| 5408
 | style='text-align:right'| 2796782144
-| 7275,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3&tanDups=pack&position=GL873525:45030822-45045391 GL873525:45030822-45045391]
+| 7275,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3&tanDups=pack&gap=dense&position=GL873525:45030822-45045391 GL873525:45030822-45045391]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=otoGar3 plot otoGar3]
 |-
-| 313
+| 329
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri1 oviAri1]
@@ Line 4,281: / Line 4,603: @@
 | style='text-align:right'| 214
 | style='text-align:right'| 36573585
-| 264,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri1&tanDups=pack&position=chr15:8985870-8986398 chr15:8985870-8986398]
+| 264,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri1&tanDups=pack&gap=dense&position=chr15:8985870-8986398 chr15:8985870-8986398]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oviAri1 plot oviAri1]
 |-
-| 314
+| 330
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]
@@ Line 4,295: / Line 4,617: @@
 | style='text-align:right'| 7004
 | style='text-align:right'| 6099422199
-| 7782,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3&tanDups=pack&position=chr21:31441666-31457230 chr21:31441666-31457230]
+| 7782,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3&tanDups=pack&gap=dense&position=chr21:31441666-31457230 chr21:31441666-31457230]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=oviAri3 plot oviAri3]
 |-
-| 315
+| 331
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1 panHod1]
@@ Line 4,309: / Line 4,631: @@
 | style='text-align:right'| 8191
 | style='text-align:right'| 4466818919
-| 3120,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1&tanDups=pack&position=KE108970:1986445-1992685 KE108970:1986445-1992685]
+| 3120,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1&tanDups=pack&gap=dense&position=KE108970:1986445-1992685 KE108970:1986445-1992685]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panHod1 plot panHod1]
 |-
-| 316
+| 332
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1 panPan1]
@@ Line 4,323: / Line 4,645: @@
 | style='text-align:right'| 7453
 | style='text-align:right'| 5965856446
-| 156,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1&tanDups=pack&position=JH650446:7527934-7528246 JH650446:7527934-7528246]
+| 156,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1&tanDups=pack&gap=dense&position=JH650446:7527934-7528246 JH650446:7527934-7528246]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panPan1 plot panPan1]
 |-
-| 317
+| 333
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan2 panPan2]
@@ Line 4,337: / Line 4,659: @@
 | style='text-align:right'| 7450
 | style='text-align:right'| 5967745842
-| 167,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan2&tanDups=pack&position=chr19:49401130-49401464 chr19:49401130-49401464]
+| 167,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan2&tanDups=pack&gap=dense&position=chr19:49401130-49401464 chr19:49401130-49401464]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panPan2 plot panPan2]
 |-
-| 318
+| 334
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1 panRed1]
@@ Line 4,351: / Line 4,673: @@
 | style='text-align:right'| 1396
 | style='text-align:right'| 66559726
-| 101,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1&tanDups=pack&position=KB454925:8492-8694 KB454925:8492-8694]
+| 101,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1&tanDups=pack&gap=dense&position=KB454925:8492-8694 KB454925:8492-8694]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panRed1 plot panRed1]
 |-
-| 319
+| 335
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1]
@@ Line 4,365: / Line 4,687: @@
 | style='text-align:right'| 7625
 | style='text-align:right'| 2368098055
-| 1135,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1&tanDups=pack&position=KE721593:7259595-7261865 KE721593:7259595-7261865]
+| 1135,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1&tanDups=pack&gap=dense&position=KE721593:7259595-7261865 KE721593:7259595-7261865]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTig1 plot panTig1]
 |-
-| 320
+| 336
+| 2003
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro1 panTro1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 808650
+| style='text-align:right'| 33
+| style='text-align:right'| 35210172
+| &nbsp;
+| style='text-align:right'| 5887
+| style='text-align:right'| 5843608490
+| 200,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro1&tanDups=pack&gap=dense&position=chr2:110339092-110339492 chr2:110339092-110339492]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTro1 plot panTro1]
+|-
+| 337
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro2 panTro2]
@@ Line 4,379: / Line 4,715: @@
 | style='text-align:right'| 4272
 | style='text-align:right'| 9139837465
-| 200,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro2&tanDups=pack&position=chr3:111771142-111771542 chr3:111771142-111771542]
+| 200,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro2&tanDups=pack&gap=dense&position=chr3:111771142-111771542 chr3:111771142-111771542]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTro2 plot panTro2]
 |-
-| 321
+| 338
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3]
@@ Line 4,393: / Line 4,729: @@
 | style='text-align:right'| 4651
 | style='text-align:right'| 8652075091
-| 15941,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3&tanDups=pack&position=chrX:43654981-43686878 chrX:43654981-43686878]
+| 15941,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3&tanDups=pack&gap=dense&position=chrX:43654981-43686878 chrX:43654981-43686878]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTro3 plot panTro3]
 |-
-| 322
+| 339
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4 panTro4]
@@ Line 4,407: / Line 4,743: @@
 | style='text-align:right'| 4652
 | style='text-align:right'| 8665203604
-| 15941,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4&tanDups=pack&position=chrX:43654981-43686878 chrX:43654981-43686878]
+| 15941,	16,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4&tanDups=pack&gap=dense&position=chrX:43654981-43686878 chrX:43654981-43686878]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTro4 plot panTro4]
 |-
-| 323
+| 340
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro5 panTro5]
@@ Line 4,421: / Line 4,757: @@
 | style='text-align:right'| 3609
 | style='text-align:right'| 11734910613
-| 4127,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro5&tanDups=pack&position=chr7_NW_015973370v1_random:285172-293435 chr7_NW_015973370v1_random:285172-293435]
+| 4127,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro5&tanDups=pack&gap=dense&position=chr7_NW_015973370v1_random:285172-293435 chr7_NW_015973370v1_random:285172-293435]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=panTro5 plot panTro5]
 |-
-| 324
+| 341
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]
@@ Line 4,435: / Line 4,771: @@
 | style='text-align:right'| 1823
 | style='text-align:right'| 9407152119
-| 616,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2&tanDups=pack&position=chr11:83077338-83078570 chr11:83077338-83078570]
+| 616,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2&tanDups=pack&gap=dense&position=chr11:83077338-83078570 chr11:83077338-83078570]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=papAnu2 plot papAnu2]
 |-
-| 325
+| 342
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papHam1 papHam1]
@@ Line 4,449: / Line 4,785: @@
 | style='text-align:right'| 3309
 | style='text-align:right'| 3807206084
-| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papHam1&tanDups=pack&position=Contig28428:39-723 Contig28428:39-723]
+| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papHam1&tanDups=pack&gap=dense&position=Contig28428:39-723 Contig28428:39-723]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=papHam1 plot papHam1]
 |-
-| 326
+| 343
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1]
@@ Line 4,463: / Line 4,799: @@
 | style='text-align:right'| 265
 | style='text-align:right'| 127612523
-| 574,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1&tanDups=pack&position=KK474798:35527-36675 KK474798:35527-36675]
+| 574,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1&tanDups=pack&gap=dense&position=KK474798:35527-36675 KK474798:35527-36675]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pelCri1 plot pelCri1]
 |-
-| 327
+| 344
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]
@@ Line 4,477: / Line 4,813: @@
 | style='text-align:right'| 2114.5
 | style='text-align:right'| 1334725849
-| 4166,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1&tanDups=pack&position=JH210925:2745573-2753905 JH210925:2745573-2753905]
+| 4166,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1&tanDups=pack&gap=dense&position=JH210925:2745573-2753905 JH210925:2745573-2753905]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pelSin1 plot pelSin1]
 |-
-| 328
+| 345
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1]
@@ Line 4,491: / Line 4,827: @@
 | style='text-align:right'| 3501
 | style='text-align:right'| 4676973953
-| 266,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1&tanDups=pack&position=KI615341:3157564-3158096 KI615341:3157564-3158096]
+| 266,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1&tanDups=pack&gap=dense&position=KI615341:3157564-3158096 KI615341:3157564-3158096]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=perManBai1 plot perManBai1]
 |-
-| 329
+| 346
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar1 petMar1]
@@ Line 4,505: / Line 4,841: @@
 | style='text-align:right'| 201
 | style='text-align:right'| 932728649
-| 362,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar1&tanDups=pack&position=Contig99174:237-961 Contig99174:237-961]
+| 362,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar1&tanDups=pack&gap=dense&position=Contig99174:237-961 Contig99174:237-961]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=petMar1 plot petMar1]
 |-
-| 330
+| 347
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2 petMar2]
@@ Line 4,519: / Line 4,855: @@
 | style='text-align:right'| 692
 | style='text-align:right'| 2324558773
-| 363,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2&tanDups=pack&position=GL498477:1987-2713 GL498477:1987-2713]
+| 363,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2&tanDups=pack&gap=dense&position=GL498477:1987-2713 GL498477:1987-2713]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=petMar2 plot petMar2]
 |-
-| 331
+| 348
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1]
@@ Line 4,533: / Line 4,869: @@
 | style='text-align:right'| 36
 | style='text-align:right'| 26355615
-| 779,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1&tanDups=pack&position=KL418261:30029-31587 KL418261:30029-31587]
+| 779,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1&tanDups=pack&gap=dense&position=KL418261:30029-31587 KL418261:30029-31587]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=phaCar1 plot phaCar1]
 |-
-| 332
+| 349
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1]
@@ Line 4,547: / Line 4,883: @@
 | style='text-align:right'| 216
 | style='text-align:right'| 85779441
-| 1077,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1&tanDups=pack&position=KK455387:47187-49341 KK455387:47187-49341]
+| 1077,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1&tanDups=pack&gap=dense&position=KK455387:47187-49341 KK455387:47187-49341]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=phaLep1 plot phaLep1]
 |-
-| 333
+| 350
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phoRub1 phoRub1]
@@ Line 4,561: / Line 4,897: @@
 | style='text-align:right'| 135
 | style='text-align:right'| 39934970
-| 526,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phoRub1&tanDups=pack&position=KK424259:7588-8640 KK424259:7588-8640]
+| 526,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phoRub1&tanDups=pack&gap=dense&position=KK424259:7588-8640 KK424259:7588-8640]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=phoRub1 plot phoRub1]
 |-
-| 334
+| 351
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phyCat1 phyCat1]
@@ Line 4,575: / Line 4,911: @@
 | style='text-align:right'| 8197
 | style='text-align:right'| 2241115729
-| 5565,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phyCat1&tanDups=pack&position=KI411098:797892-809022 KI411098:797892-809022]
+| 5565,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phyCat1&tanDups=pack&gap=dense&position=KI411098:797892-809022 KI411098:797892-809022]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=phyCat1 plot phyCat1]
 |-
-| 335
+| 352
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1]
@@ Line 4,589: / Line 4,925: @@
 | style='text-align:right'| 7796
 | style='text-align:right'| 3299119050
-| 4915,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1&tanDups=pack&position=KL215520:252741-262573 KL215520:252741-262573]
+| 4915,	3,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1&tanDups=pack&gap=dense&position=KL215520:252741-262573 KL215520:252741-262573]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=picPub1 plot picPub1]
 |-
-| 336
+| 353
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1]
@@ Line 4,603: / Line 4,939: @@
 | style='text-align:right'| 4650
 | style='text-align:right'| 990605574
-| 1886,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1&tanDups=pack&position=KI520679:7484-11256 KI520679:7484-11256]
+| 1886,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1&tanDups=pack&gap=dense&position=KI520679:7484-11256 KI520679:7484-11256]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=poeFor1 plot poeFor1]
 |-
-| 337
+| 354
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1]
@@ Line 4,617: / Line 4,953: @@
 | style='text-align:right'| 1511
 | style='text-align:right'| 343849361
-| 8790,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1&tanDups=pack&position=chrLG5:27506035-27523618 chrLG5:27506035-27523618]
+| 8790,	4,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1&tanDups=pack&gap=dense&position=chrLG5:27506035-27523618 chrLG5:27506035-27523618]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=poeRet1 plot poeRet1]
 |-
-| 338
+| 355
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe1 ponAbe1]
@@ Line 4,631: / Line 4,967: @@
 | style='text-align:right'| 3928
 | style='text-align:right'| 8754202217
-| 285,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe1&tanDups=pack&position=Contig811:16977-17547 Contig811:16977-17547]
+| 285,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe1&tanDups=pack&gap=dense&position=Contig811:16977-17547 Contig811:16977-17547]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ponAbe1 plot ponAbe1]
 |-
-| 339
+| 356
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe2 ponAbe2]
@@ Line 4,645: / Line 4,981: @@
 | style='text-align:right'| 4659
 | style='text-align:right'| 11283067110
-| 769,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe2&tanDups=pack&position=chr11:46659515-46661053 chr11:46659515-46661053]
+| 769,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe2&tanDups=pack&gap=dense&position=chr11:46659515-46661053 chr11:46659515-46661053]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ponAbe2 plot ponAbe2]
 |-
-| 340
+| 357
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1 priExs1]
@@ Line 4,659: / Line 4,995: @@
 | style='text-align:right'| 1128
 | style='text-align:right'| 98936342
-| 1626,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1&tanDups=pack&position=scaffold830:51430-54682 scaffold830:51430-54682]
+| 1626,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1&tanDups=pack&gap=dense&position=scaffold830:51430-54682 scaffold830:51430-54682]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=priExs1 plot priExs1]
 |-
-| 341
+| 358
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac1 priPac1]
@@ Line 4,673: / Line 5,009: @@
 | style='text-align:right'| 448
 | style='text-align:right'| 80615899
-| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac1&tanDups=pack&position=chrUn:71534792-71535792 chrUn:71534792-71535792]
+| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac1&tanDups=pack&gap=dense&position=chrUn:71534792-71535792 chrUn:71534792-71535792]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=priPac1 plot priPac1]
 |-
-| 342
+| 359
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac2 priPac2]
@@ Line 4,687: / Line 5,023: @@
 | style='text-align:right'| 259
 | style='text-align:right'| 25863820
-| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac2&tanDups=pack&position=ABKE01002096:3239-4239 ABKE01002096:3239-4239]
+| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac2&tanDups=pack&gap=dense&position=ABKE01002096:3239-4239 ABKE01002096:3239-4239]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=priPac2 plot priPac2]
 |-
-| 343
+| 360
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3 priPac3]
@@ Line 4,701: / Line 5,037: @@
 | style='text-align:right'| 321
 | style='text-align:right'| 82136541
-| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3&tanDups=pack&position=Ppa_Contig5:941324-942324 Ppa_Contig5:941324-942324]
+| 500,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3&tanDups=pack&gap=dense&position=Ppa_Contig5:941324-942324 Ppa_Contig5:941324-942324]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=priPac3 plot priPac3]
 |-
-| 344
+| 361
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1 proCap1]
@@ Line 4,715: / Line 5,051: @@
 | style='text-align:right'| 935
 | style='text-align:right'| 440411229
-| 254,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1&tanDups=pack&position=scaffold_6350:37640-38148 scaffold_6350:37640-38148]
+| 254,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1&tanDups=pack&gap=dense&position=scaffold_6350:37640-38148 scaffold_6350:37640-38148]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=proCap1 plot proCap1]
 |-
-| 345
+| 362
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]
@@ Line 4,729: / Line 5,065: @@
 | style='text-align:right'| 130
 | style='text-align:right'| 200423267
-| 7517,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1&tanDups=pack&position=KB221191:4083820-4098863 KB221191:4083820-4098863]
+| 7517,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1&tanDups=pack&gap=dense&position=KB221191:4083820-4098863 KB221191:4083820-4098863]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pseHum1 plot pseHum1]
 |-
-| 346
+| 363
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]
@@ Line 4,743: / Line 5,079: @@
 | style='text-align:right'| 223
 | style='text-align:right'| 316324647
-| 1333,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1&tanDups=pack&position=KB031158:55901168-55903834 KB031158:55901168-55903834]
+| 1333,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1&tanDups=pack&gap=dense&position=KB031158:55901168-55903834 KB031158:55901168-55903834]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pteAle1 plot pteAle1]
 |-
-| 347
+| 364
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1]
@@ Line 4,757: / Line 5,093: @@
 | style='text-align:right'| 100
 | style='text-align:right'| 106772284
-| 534,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1&tanDups=pack&position=JMFR01060883:1891-2959 JMFR01060883:1891-2959]
+| 534,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1&tanDups=pack&gap=dense&position=JMFR01060883:1891-2959 JMFR01060883:1891-2959]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pteGut1 plot pteGut1]
 |-
-| 348
+| 365
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1 ptePar1]
@@ Line 4,771: / Line 5,107: @@
 | style='text-align:right'| 268
 | style='text-align:right'| 31185376
-| 1327,	6,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1&tanDups=pack&position=AWGZ01430664:1-2660 AWGZ01430664:1-2660]
+| 1327,	6,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1&tanDups=pack&gap=dense&position=AWGZ01430664:1-2660 AWGZ01430664:1-2660]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ptePar1 plot ptePar1]
 |-
-| 349
+| 366
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]
@@ Line 4,785: / Line 5,121: @@
 | style='text-align:right'| 1547
 | style='text-align:right'| 867093676
-| 194,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1&tanDups=pack&position=scaffold_275:208852-209240 scaffold_275:208852-209240]
+| 194,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1&tanDups=pack&gap=dense&position=scaffold_275:208852-209240 scaffold_275:208852-209240]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pteVam1 plot pteVam1]
 |-
-| 350
+| 367
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]
@@ Line 4,799: / Line 5,135: @@
 | style='text-align:right'| 3630
 | style='text-align:right'| 214952201
-| 5131,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1&tanDups=pack&position=JH419262:1608400-1618681 JH419262:1608400-1618681]
+| 5131,	20,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1&tanDups=pack&gap=dense&position=JH419262:1608400-1618681 JH419262:1608400-1618681]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=punNye1 plot punNye1]
 |-
-| 351
+| 368
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1]
@@ Line 4,813: / Line 5,149: @@
 | style='text-align:right'| 2165.5
 | style='text-align:right'| 202245057
-| 2147,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1&tanDups=pack&position=KL225502:93242-97536 KL225502:93242-97536]
+| 2147,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1&tanDups=pack&gap=dense&position=KL225502:93242-97536 KL225502:93242-97536]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pygAde1 plot pygAde1]
 |-
-| 352
+| 369
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1]
@@ Line 4,827: / Line 5,163: @@
 | style='text-align:right'| 217
 | style='text-align:right'| 396468667
-| 235,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1&tanDups=pack&position=KE953144:259222-259692 KE953144:259222-259692]
+| 235,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1&tanDups=pack&gap=dense&position=KE953144:259222-259692 KE953144:259222-259692]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=pytBiv1 plot pytBiv1]
 |-
-| 353
+| 370
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase0 repBase0]
@@ Line 4,841: / Line 5,177: @@
 | style='text-align:right'| 81.5
 | style='text-align:right'| 7619
-| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase0&tanDups=pack&position=MER51A:232-372 MER51A:232-372]
+| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase0&tanDups=pack&gap=dense&position=MER51A:232-372 MER51A:232-372]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=repBase0 plot repBase0]
 |-
-| 354
+| 371
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase1 repBase1]
@@ Line 4,855: / Line 5,191: @@
 | style='text-align:right'| 77
 | style='text-align:right'| 9691
-| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase1&tanDups=pack&position=MER51A:232-372 MER51A:232-372]
+| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase1&tanDups=pack&gap=dense&position=MER51A:232-372 MER51A:232-372]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=repBase1 plot repBase1]
 |-
-| 355
+| 372
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase2 repBase2]
@@ Line 4,869: / Line 5,205: @@
 | style='text-align:right'| 79
 | style='text-align:right'| 6907
-| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase2&tanDups=pack&position=MER51A:232-372 MER51A:232-372]
+| 70,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase2&tanDups=pack&gap=dense&position=MER51A:232-372 MER51A:232-372]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=repBase2 plot repBase2]
 |-
-| 357
+| 374
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac1 rheMac1]
@@ Line 4,883: / Line 5,219: @@
 | style='text-align:right'| 3903
 | style='text-align:right'| 4022554742
-| 166,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac1&tanDups=pack&position=SCAFFOLD105044:90895-91227 SCAFFOLD105044:90895-91227]
+| 166,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac1&tanDups=pack&gap=dense&position=SCAFFOLD105044:90895-91227 SCAFFOLD105044:90895-91227]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rheMac1 plot rheMac1]
 |-
-| 358
+| 375
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3 rheMac3]
@@ Line 4,897: / Line 5,233: @@
 | style='text-align:right'| 6165
 | style='text-align:right'| 4578985642
-| 1652,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3&tanDups=pack&position=chr7:163447756-163451061 chr7:163447756-163451061]
+| 1652,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3&tanDups=pack&gap=dense&position=chr7:163447756-163451061 chr7:163447756-163451061]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rheMac3 plot rheMac3]
 |-
-| 359
+| 376
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 rheMac8]
@@ Line 4,911: / Line 5,247: @@
 | style='text-align:right'| 652
 | style='text-align:right'| 9828434554
-| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8&tanDups=pack&position=chrUn_NW_014851878v1:101-785 chrUn_NW_014851878v1:101-785]
+| 342,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8&tanDups=pack&gap=dense&position=chrUn_NW_014851878v1:101-785 chrUn_NW_014851878v1:101-785]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rheMac8 plot rheMac8]
 |-
-| 360
+| 377
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiBie1 rhiBie1]
@@ Line 4,925: / Line 5,261: @@
 | style='text-align:right'| 5459
 | style='text-align:right'| 6210031772
-| 1941,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiBie1&tanDups=pack&position=NW_016810765v1:2055509-2059391 NW_016810765v1:2055509-2059391]
+| 1941,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiBie1&tanDups=pack&gap=dense&position=NW_016810765v1:2055509-2059391 NW_016810765v1:2055509-2059391]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rhiBie1 plot rhiBie1]
 |-
-| 361
+| 378
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiFer1 rhiFer1]
@@ Line 4,939: / Line 5,275: @@
 | style='text-align:right'| 174
 | style='text-align:right'| 41741562
-| 172,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiFer1&tanDups=pack&position=AWHA01239258:1699-2043 AWHA01239258:1699-2043]
+| 172,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiFer1&tanDups=pack&gap=dense&position=AWHA01239258:1699-2043 AWHA01239258:1699-2043]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rhiFer1 plot rhiFer1]
 |-
-| 362
+| 379
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiRox1 rhiRox1]
@@ Line 4,953: / Line 5,289: @@
 | style='text-align:right'| 6393
 | style='text-align:right'| 8021193204
-| 11652,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiRox1&tanDups=pack&position=KN294251v1:31824-55128 KN294251v1:31824-55128]
+| 11652,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiRox1&tanDups=pack&gap=dense&position=KN294251v1:31824-55128 KN294251v1:31824-55128]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rhiRox1 plot rhiRox1]
 |-
-| 363
+| 380
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ricCom1 ricCom1]
@@ Line 4,967: / Line 5,303: @@
 | style='text-align:right'| 2948
 | style='text-align:right'| 2156357980
-| 460,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ricCom1&tanDups=pack&position=EQ974418:17730-18650 EQ974418:17730-18650]
+| 460,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ricCom1&tanDups=pack&gap=dense&position=EQ974418:17730-18650 EQ974418:17730-18650]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ricCom1 plot ricCom1]
 |-
-| 364
+| 381
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn3 rn3]
@@ Line 4,981: / Line 5,317: @@
 | style='text-align:right'| 5386
 | style='text-align:right'| 8488809019
-| 230,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn3&tanDups=pack&position=chr1:37917795-37918255 chr1:37917795-37918255]
+| 230,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn3&tanDups=pack&gap=dense&position=chr1:37917795-37918255 chr1:37917795-37918255]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rn3 plot rn3]
 |-
-| 365
+| 382
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn4 rn4]
@@ Line 4,995: / Line 5,331: @@
 | style='text-align:right'| 5409
 | style='text-align:right'| 8492561356
-| 230,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn4&tanDups=pack&position=chr1:37914850-37915310 chr1:37914850-37915310]
+| 230,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn4&tanDups=pack&gap=dense&position=chr1:37914850-37915310 chr1:37914850-37915310]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rn4 plot rn4]
 |-
-| 366
+| 383
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rouAeg1 rouAeg1]
@@ Line 5,009: / Line 5,345: @@
 | style='text-align:right'| 5517
 | style='text-align:right'| 522939887
-| 410,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rouAeg1&tanDups=pack&position=NW_015493119v1:122550-123371 NW_015493119v1:122550-123371]
+| 410,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rouAeg1&tanDups=pack&gap=dense&position=NW_015493119v1:122550-123371 NW_015493119v1:122550-123371]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=rouAeg1 plot rouAeg1]
 |-
-| 367
+| 384
 | 2003
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer1 sacCer1]
@@ Line 5,023: / Line 5,359: @@
 | style='text-align:right'| 1914.5
 | style='text-align:right'| 2711249
-| 50,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer1&tanDups=pack&position=chr7:519107-519207 chr7:519107-519207]
+| 50,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer1&tanDups=pack&gap=dense&position=chr7:519107-519207 chr7:519107-519207]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sacCer1 plot sacCer1]
 |-
-| 368
+| 385
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer2 sacCer2]
@@ Line 5,037: / Line 5,373: @@
 | style='text-align:right'| 1868
 | style='text-align:right'| 2711600
-| 71,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer2&tanDups=pack&position=chrX:120898-121040 chrX:120898-121040]
+| 71,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer2&tanDups=pack&gap=dense&position=chrX:120898-121040 chrX:120898-121040]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sacCer2 plot sacCer2]
 |-
-| 369
+| 386
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3]
@@ Line 5,051: / Line 5,387: @@
 | style='text-align:right'| 1868
 | style='text-align:right'| 2711582
-| 1988,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3&tanDups=pack&position=chrVIII:212266-216251 chrVIII:212266-216251]
+| 1988,	10,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3&tanDups=pack&gap=dense&position=chrVIII:212266-216251 chrVIII:212266-216251]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sacCer3 plot sacCer3]
 |-
-| 370
+| 387
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]
@@ Line 5,065: / Line 5,401: @@
 | style='text-align:right'| 7999
 | style='text-align:right'| 4457057956
-| 278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1&tanDups=pack&position=JH378108:18778847-18779403 JH378108:18778847-18779403]
+| 278,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1&tanDups=pack&gap=dense&position=JH378108:18778847-18779403 JH378108:18778847-18779403]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=saiBol1 plot saiBol1]
 |-
-| 371
+| 388
-| 2013
+| 2017
-| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1 sebNig1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=salMan0 salMan0]
-| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000475235.1/ GCA_000475235.1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 13868435
+| style='text-align:right'| 37
+| style='text-align:right'| 686719420
+| &nbsp;
+| style='text-align:right'| 1377
+| style='text-align:right'| 51891830179
+| 517,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=salMan0&tanDups=pack&gap=dense&position=contig132009:61305-62339 contig132009:61305-62339]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=salMan0 plot salMan0]
+|-
+| 389
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000189315.1/ GCF_000189315.1]
+| Phusion2 v. 1.0
+| style='text-align:right'| 351216
+| style='text-align:right'| 36
+| style='text-align:right'| 19186514
+| &nbsp;
+| style='text-align:right'| 1000
+| style='text-align:right'| 1396676918
+| 169,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1&tanDups=pack&gap=dense&position=chrX_GL868371_random:2134-2472 chrX_GL868371_random:2134-2472]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sarHar1 plot sarHar1]
+|-
+| 390
+| 2013
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1 sebNig1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000475235.1/ GCA_000475235.1]
 | tbd
 | style='text-align:right'| 344468
@@ Line 5,079: / Line 5,443: @@
 | style='text-align:right'| 94
 | style='text-align:right'| 249080272
-| 492,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1&tanDups=pack&position=AUPR01114153:357-1341 AUPR01114153:357-1341]
+| 492,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1&tanDups=pack&gap=dense&position=AUPR01114153:357-1341 AUPR01114153:357-1341]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sebNig1 plot sebNig1]
 |-
-| 372
+| 391
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1 sebRub1]
@@ Line 5,093: / Line 5,457: @@
 | style='text-align:right'| 139
 | style='text-align:right'| 352997550
-| 408,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1&tanDups=pack&position=KI445670:61530-62346 KI445670:61530-62346]
+| 408,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1&tanDups=pack&gap=dense&position=KI445670:61530-62346 KI445670:61530-62346]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sebRub1 plot sebRub1]
 |-
-| 373
+| 392
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1]
@@ Line 5,107: / Line 5,471: @@
 | style='text-align:right'| 157
 | style='text-align:right'| 357279352
-| 3222,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1&tanDups=pack&position=HG009216:7215262-7221706 HG009216:7215262-7221706]
+| 3222,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1&tanDups=pack&gap=dense&position=HG009216:7215262-7221706 HG009216:7215262-7221706]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=serCan1 plot serCan1]
 |-
-| 374
+| 393
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra1 sorAra1]
@@ Line 5,121: / Line 5,485: @@
 | style='text-align:right'| 1696
 | style='text-align:right'| 783418280
-| 167,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra1&tanDups=pack&position=scaffold_138113:4547-4881 scaffold_138113:4547-4881]
+| 167,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra1&tanDups=pack&gap=dense&position=scaffold_138113:4547-4881 scaffold_138113:4547-4881]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sorAra1 plot sorAra1]
 |-
-| 375
+| 394
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]
@@ Line 5,135: / Line 5,499: @@
 | style='text-align:right'| 5940
 | style='text-align:right'| 2962830748
-| 236,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2&tanDups=pack&position=JH798205:592464-592936 JH798205:592464-592936]
+| 236,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2&tanDups=pack&gap=dense&position=JH798205:592464-592936 JH798205:592464-592936]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=sorAra2 plot sorAra2]
 |-
-| 376
+| 395
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri1 speTri1]
@@ Line 5,149: / Line 5,513: @@
 | style='text-align:right'| 1017
 | style='text-align:right'| 2492700168
-| 349,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri1&tanDups=pack&position=scaffold_160520:112228-112926 scaffold_160520:112228-112926]
+| 349,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri1&tanDups=pack&gap=dense&position=scaffold_160520:112228-112926 scaffold_160520:112228-112926]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=speTri1 plot speTri1]
 |-
-| 377
+| 396
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]
@@ Line 5,163: / Line 5,527: @@
 | style='text-align:right'| 2662
 | style='text-align:right'| 1156742500
-| 204,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2&tanDups=pack&position=JH393366:4794989-4795397 JH393366:4794989-4795397]
+| 204,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2&tanDups=pack&gap=dense&position=JH393366:4794989-4795397 JH393366:4794989-4795397]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=speTri2 plot speTri2]
 |-
-| 378
+| 397
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1]
@@ Line 5,177: / Line 5,541: @@
 | style='text-align:right'| 3673
 | style='text-align:right'| 549500672
-| 2624,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1&tanDups=pack&position=KK581067:134955-140203 KK581067:134955-140203]
+| 2624,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1&tanDups=pack&gap=dense&position=KK581067:134955-140203 KK581067:134955-140203]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=stePar1 plot stePar1]
 |-
-| 379
+| 398
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam0 strCam0]
@@ Line 5,191: / Line 5,555: @@
 | style='text-align:right'| 666
 | style='text-align:right'| 94888209
-| 1134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam0&tanDups=pack&position=superscaffold9:6014874-6017142 superscaffold9:6014874-6017142]
+| 1134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam0&tanDups=pack&gap=dense&position=superscaffold9:6014874-6017142 superscaffold9:6014874-6017142]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strCam0 plot strCam0]
 |-
-| 380
+| 399
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1]
@@ Line 5,205: / Line 5,569: @@
 | style='text-align:right'| 646
 | style='text-align:right'| 93976596
-| 1134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1&tanDups=pack&position=KL206988:717376-719644 KL206988:717376-719644]
+| 1134,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1&tanDups=pack&gap=dense&position=KL206988:717376-719644 KL206988:717376-719644]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strCam1 plot strCam1]
 |-
-| 381
+| 400
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur1 strPur1]
@@ Line 5,219: / Line 5,583: @@
 | style='text-align:right'| 847.5
 | style='text-align:right'| 1824767726
-| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur1&tanDups=pack&position=Scaffold18311:2619-4531 Scaffold18311:2619-4531]
+| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur1&tanDups=pack&gap=dense&position=Scaffold18311:2619-4531 Scaffold18311:2619-4531]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strPur1 plot strPur1]
 |-
-| 382
+| 401
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur2 strPur2]
@@ Line 5,233: / Line 5,597: @@
 | style='text-align:right'| 1453
 | style='text-align:right'| 2323533345
-| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur2&tanDups=pack&position=Scaffold47464:201872-203784 Scaffold47464:201872-203784]
+| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur2&tanDups=pack&gap=dense&position=Scaffold47464:201872-203784 Scaffold47464:201872-203784]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strPur2 plot strPur2]
 |-
-| 383
+| 402
 | 2010
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur3 strPur3]
@@ Line 5,247: / Line 5,611: @@
 | style='text-align:right'| 1763
 | style='text-align:right'| 2733632009
-| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur3&tanDups=pack&position=Scaffold85:237230-239142 Scaffold85:237230-239142]
+| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur3&tanDups=pack&gap=dense&position=Scaffold85:237230-239142 Scaffold85:237230-239142]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strPur3 plot strPur3]
 |-
-| 384
+| 403
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4]
@@ Line 5,261: / Line 5,625: @@
 | style='text-align:right'| 2360
 | style='text-align:right'| 3918297070
-| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4&tanDups=pack&position=Scaffold382:244159-246071 Scaffold382:244159-246071]
+| 956,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4&tanDups=pack&gap=dense&position=Scaffold382:244159-246071 Scaffold382:244159-246071]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strPur4 plot strPur4]
 |-
-| 385
+| 404
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat1 strRat1]
@@ Line 5,275: / Line 5,639: @@
 | style='text-align:right'| 1077
 | style='text-align:right'| 26058414
-| 113,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat1&tanDups=pack&position=RATTI_contig_57682:4110-4336 RATTI_contig_57682:4110-4336]
+| 113,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat1&tanDups=pack&gap=dense&position=RATTI_contig_57682:4110-4336 RATTI_contig_57682:4110-4336]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strRat1 plot strRat1]
 |-
-| 386
+| 405
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]
@@ Line 5,289: / Line 5,653: @@
 | style='text-align:right'| 2233
 | style='text-align:right'| 37502032
-| 67,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2&tanDups=pack&position=chrUn_LN609483v1:243-377 chrUn_LN609483v1:243-377]
+| 67,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2&tanDups=pack&gap=dense&position=chrUn_LN609483v1:243-377 chrUn_LN609483v1:243-377]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=strRat2 plot strRat2]
 |-
-| 388
+| 407
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut0 taeGut0]
@@ Line 5,303: / Line 5,667: @@
 | style='text-align:right'| 3833
 | style='text-align:right'| 2936709220
-| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut0&tanDups=pack&position=Contig47:5328655-5329073 Contig47:5328655-5329073]
+| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut0&tanDups=pack&gap=dense&position=Contig47:5328655-5329073 Contig47:5328655-5329073]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=taeGut0 plot taeGut0]
 |-
-| 389
+| 408
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut1 taeGut1]
@@ Line 5,317: / Line 5,681: @@
 | style='text-align:right'| 3557
 | style='text-align:right'| 2849213000
-| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut1&tanDups=pack&position=chrZ:28813941-28814359 chrZ:28813941-28814359]
+| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut1&tanDups=pack&gap=dense&position=chrZ:28813941-28814359 chrZ:28813941-28814359]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=taeGut1 plot taeGut1]
 |-
-| 390
+| 409
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]
@@ Line 5,331: / Line 5,695: @@
 | style='text-align:right'| 3541
 | style='text-align:right'| 2830875406
-| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2&tanDups=pack&position=chrZ:28813941-28814359 chrZ:28813941-28814359]
+| 209,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2&tanDups=pack&gap=dense&position=chrZ:28813941-28814359 chrZ:28813941-28814359]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=taeGut2 plot taeGut2]
 |-
-| 392
+| 411
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1 takFla1]
@@ Line 5,345: / Line 5,709: @@
 | style='text-align:right'| 184
 | style='text-align:right'| 251435705
-| 503,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1&tanDups=pack&position=KE121297:329-1335 KE121297:329-1335]
+| 503,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1&tanDups=pack&gap=dense&position=KE121297:329-1335 KE121297:329-1335]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=takFla1 plot takFla1]
 |-
-| 393
+| 412
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarIhg38 tarIhg38]
@@ Line 5,359: / Line 5,723: @@
 | style='text-align:right'| 7485
 | style='text-align:right'| 11152715153
-| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarIhg38&tanDups=pack&position=chr13:79957499-79957949 chr13:79957499-79957949]
+| 225,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarIhg38&tanDups=pack&gap=dense&position=chr13:79957499-79957949 chr13:79957499-79957949]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tarIhg38 plot tarIhg38]
 |-
-| 394
+| 413
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr1 tarSyr1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 331855
+| style='text-align:right'| 34
+| style='text-align:right'| 14787267
+| &nbsp;
+| style='text-align:right'| 2876
+| style='text-align:right'| 1459380714
+| 448,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr1&tanDups=pack&gap=dense&position=scaffold_66218:7702-8598 scaffold_66218:7702-8598]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tarSyr1 plot tarSyr1]
+|-
+| 414
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1]
+| Celera v. DEC-2012
+| style='text-align:right'| 1116806
+| style='text-align:right'| 34
+| style='text-align:right'| 43244623
+| &nbsp;
+| style='text-align:right'| 7232
+| style='text-align:right'| 9159997506
+| 448,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2&tanDups=pack&gap=dense&position=KE938007v1:127466-128362 KE938007v1:127466-128362]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tarSyr2 plot tarSyr2]
+|-
+| 415
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1]
@@ Line 5,373: / Line 5,765: @@
 | style='text-align:right'| 2194
 | style='text-align:right'| 291694166
-| 227,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1&tanDups=pack&position=JNOY01082112:3268-3722 JNOY01082112:3268-3722]
+| 227,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1&tanDups=pack&gap=dense&position=JNOY01082112:3268-3722 JNOY01082112:3268-3722]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tauEry1 plot tauEry1]
 |-
-| 395
+| 416
 | 2002
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig1 tetNig1]
@@ Line 5,387: / Line 5,779: @@
 | style='text-align:right'| 3055
 | style='text-align:right'| 661840431
-| 413,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig1&tanDups=pack&position=chrUn_random:43732955-43733781 chrUn_random:43732955-43733781]
+| 413,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig1&tanDups=pack&gap=dense&position=chrUn_random:43732955-43733781 chrUn_random:43732955-43733781]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tetNig1 plot tetNig1]
 |-
-| 396
+| 417
 | 2009
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2 tetNig2]
@@ Line 5,401: / Line 5,793: @@
 | style='text-align:right'| 3013
 | style='text-align:right'| 657839855
-| 413,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2&tanDups=pack&position=chrUn_random:35610230-35611056 chrUn_random:35610230-35611056]
+| 413,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2&tanDups=pack&gap=dense&position=chrUn_random:35610230-35611056 chrUn_random:35610230-35611056]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tetNig2 plot tetNig2]
 |-
-| 397
+| 418
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut1 tinGut1]
@@ Line 5,415: / Line 5,807: @@
 | style='text-align:right'| 279
 | style='text-align:right'| 110109614
-| 416,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut1&tanDups=pack&position=KL400833:106660-107492 KL400833:106660-107492]
+| 416,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut1&tanDups=pack&gap=dense&position=KL400833:106660-107492 KL400833:106660-107492]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tinGut1 plot tinGut1]
 |-
-| 398
+| 419
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2]
@@ Line 5,429: / Line 5,821: @@
 | style='text-align:right'| 279
 | style='text-align:right'| 110101482
-| 416,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2&tanDups=pack&position=KL895505:106660-107492 KL895505:106660-107492]
+| 416,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2&tanDups=pack&gap=dense&position=KL895505:106660-107492 KL895505:106660-107492]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tinGut2 plot tinGut2]
 |-
-| 399
+| 420
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas1 triCas1]
@@ Line 5,443: / Line 5,835: @@
 | style='text-align:right'| 794
 | style='text-align:right'| 170185880
-| 307,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas1&tanDups=pack&position=Reptig797:115-729 Reptig797:115-729]
+| 307,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas1&tanDups=pack&gap=dense&position=Reptig797:115-729 Reptig797:115-729]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triCas1 plot triCas1]
 |-
-| 400
+| 421
 | 2005
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas2 triCas2]
@@ Line 5,457: / Line 5,849: @@
 | style='text-align:right'| 885
 | style='text-align:right'| 196279053
-| 192,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas2&tanDups=pack&position=singleUn_1374:29986-30370 singleUn_1374:29986-30370]
+| 192,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas2&tanDups=pack&gap=dense&position=singleUn_1374:29986-30370 singleUn_1374:29986-30370]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triCas2 plot triCas2]
 |-
-| 401
+| 422
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]
 | style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1]
 | AllPaths v. R38542
 | style='text-align:right'| 244060
 | style='text-align:right'| 35
 | style='text-align:right'| 10697421
 | &nbsp;
 | style='text-align:right'| 6090
 | style='text-align:right'| 1795040829
-| 288,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1&tanDups=pack&position=JH594632:5261920-5262496 JH594632:5261920-5262496]
+| 288,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1&tanDups=pack&gap=dense&position=JH594632:5261920-5262496 JH594632:5261920-5262496]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triMan1 plot triMan1]
 |-
-| 402
+| 423
 | 2015
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1 triSpi1]
 | style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181795.1/ GCF_000181795.1]
 | PCAP v. January 12, 2007
 | style='text-align:right'| 11343
 | style='text-align:right'| 54
 | style='text-align:right'| 1176023
+| &nbsp;
+| style='text-align:right'| 4572
+| style='text-align:right'| 74727382
+| 98,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1&tanDups=pack&gap=dense&position=GL622792v1:5540185-5540381 GL622792v1:5540185-5540381]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triSpi1 plot triSpi1]
+|-
+| 424
+| 2015
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000701005.1/ GCA_000701005.1]
+| SOAPdenovo v. 2
+| style='text-align:right'| 17372
+| style='text-align:right'| 45
+| style='text-align:right'| 1593967
+| &nbsp;
+| style='text-align:right'| 2042.5
+| style='text-align:right'| 75416120
+| 501,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1&tanDups=pack&gap=dense&position=KL363185v1:221782-222784 KL363185v1:221782-222784]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triSui1 plot triSui1]
+|-
+| 425
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupBel1 tupBel1]
+| style='text-align:center;'| tbd
+| tbd
+| style='text-align:right'| 598738
+| style='text-align:right'| 38
+| style='text-align:right'| 30146267
 | &nbsp;
-| style='text-align:right'| 4572
+| style='text-align:right'| 3026
-| style='text-align:right'| 74727382
+| style='text-align:right'| 2905815098
-| 98,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1&tanDups=pack&position=GL622792v1:5540185-5540381 GL622792v1:5540185-5540381]
+| 357,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupBel1&tanDups=pack&gap=dense&position=scaffold_113598.1-49138:9741-10455 scaffold_113598.1-49138:9741-10455]
-| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triSpi1 plot triSpi1]
+| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tupBel1 plot tupBel1]
 |-
-| 403
+| 426
-| 2015
-| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]
-| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000701005.1/ GCA_000701005.1]
-| SOAPdenovo v. 2
-| style='text-align:right'| 17372
-| style='text-align:right'| 45
-| style='text-align:right'| 1593967
-| &nbsp;
-| style='text-align:right'| 2042.5
-| style='text-align:right'| 75416120
-| 501,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1&tanDups=pack&position=KL363185v1:221782-222784 KL363185v1:221782-222784]
-| [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=triSui1 plot triSui1]
-|-
-| 404
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]
@@ Line 5,513: / Line 5,919: @@
 | style='text-align:right'| 4569
 | style='text-align:right'| 5345749214
-| 3940,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1&tanDups=pack&position=KB320811:857808-865688 KB320811:857808-865688]
+| 3940,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1&tanDups=pack&gap=dense&position=KB320811:857808-865688 KB320811:857808-865688]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tupChi1 plot tupChi1]
 |-
-| 405
+| 427
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru1 turTru1]
@@ Line 5,527: / Line 5,933: @@
 | style='text-align:right'| 4334
 | style='text-align:right'| 3598266237
-| 726,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru1&tanDups=pack&position=scaffold_99142:224631-226083 scaffold_99142:224631-226083]
+| 726,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru1&tanDups=pack&gap=dense&position=scaffold_99142:224631-226083 scaffold_99142:224631-226083]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=turTru1 plot turTru1]
 |-
-| 406
+| 428
 | 2012
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]
@@ Line 5,541: / Line 5,947: @@
 | style='text-align:right'| 691
 | style='text-align:right'| 2466469760
-| 652,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2&tanDups=pack&position=JH474081:172050-173354 JH474081:172050-173354]
+| 652,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2&tanDups=pack&gap=dense&position=JH474081:172050-173354 JH474081:172050-173354]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=turTru2 plot turTru2]
 |-
-| 407
+| 429
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1]
@@ Line 5,555: / Line 5,961: @@
 | style='text-align:right'| 81
 | style='text-align:right'| 23744286
-| 199,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1&tanDups=pack&position=JJRD01024771:5513-5911 JJRD01024771:5513-5911]
+| 199,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1&tanDups=pack&gap=dense&position=JJRD01024771:5513-5911 JJRD01024771:5513-5911]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=tytAlb1 plot tytAlb1]
 |-
-| 408
+| 430
 | 2014
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1 ursMar1]
@@ Line 5,569: / Line 5,975: @@
 | style='text-align:right'| 7601
 | style='text-align:right'| 2530787255
-| 5007,	6,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1&tanDups=pack&position=KK498603:22100903-22110922 KK498603:22100903-22110922]
+| 5007,	6,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1&tanDups=pack&gap=dense&position=KK498603:22100903-22110922 KK498603:22100903-22110922]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=ursMar1 plot ursMar1]
 |-
-| 409
+| 431
 | 2007
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=venter1 venter1]
@@ Line 5,583: / Line 5,989: @@
 | style='text-align:right'| 7414
 | style='text-align:right'| 7568565462
-| 475,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=venter1&tanDups=pack&position=chr14:54149213-54150163 chr14:54149213-54150163]
+| 475,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=venter1&tanDups=pack&gap=dense&position=chr14:54149213-54150163 chr14:54149213-54150163]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=venter1 plot venter1]
 |-
-| 410
+| 432
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac1 vicPac1]
@@ Line 5,597: / Line 6,003: @@
 | style='text-align:right'| 637
 | style='text-align:right'| 730415397
-| 248,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac1&tanDups=pack&position=scaffold_134438:933-1429 scaffold_134438:933-1429]
+| 248,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac1&tanDups=pack&gap=dense&position=scaffold_134438:933-1429 scaffold_134438:933-1429]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=vicPac1 plot vicPac1]
 |-
-| 411
+| 433
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]
@@ Line 5,611: / Line 6,017: @@
 | style='text-align:right'| 873
 | style='text-align:right'| 480695662
-| 170,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2&tanDups=pack&position=KB632444:13257033-13257373 KB632444:13257033-13257373]
+| 170,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2&tanDups=pack&gap=dense&position=KB632444:13257033-13257373 KB632444:13257033-13257373]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=vicPac2 plot vicPac2]
 |-
-| 412
+| 434
 | 2008
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicVic1 vicVic1]
@@ Line 5,625: / Line 6,031: @@
 | style='text-align:right'| 637
 | style='text-align:right'| 731143924
-| 248,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicVic1&tanDups=pack&position=scaffold_134439:933-1429 scaffold_134439:933-1429]
+| 248,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicVic1&tanDups=pack&gap=dense&position=scaffold_134439:933-1429 scaffold_134439:933-1429]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=vicVic1 plot vicVic1]
 |-
-| 413
+| 435
 | 2017
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenLae2 xenLae2]
@@ Line 5,639: / Line 6,045: @@
 | style='text-align:right'| 793
 | style='text-align:right'| 3038879681
-| 643,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenLae2&tanDups=pack&position=chr4L:85154781-85156068 chr4L:85154781-85156068]
+| 643,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenLae2&tanDups=pack&gap=dense&position=chr4L:85154781-85156068 chr4L:85154781-85156068]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenLae2 plot xenLae2]
 |-
-| 414
+| 436
 | 2004
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro1 xenTro1]
@@ Line 5,653: / Line 6,059: @@
 | style='text-align:right'| 216
 | style='text-align:right'| 2854287515
-| 347,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro1&tanDups=pack&position=scaffold_3418:6326-7020 scaffold_3418:6326-7020]
+| 347,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro1&tanDups=pack&gap=dense&position=scaffold_3418:6326-7020 scaffold_3418:6326-7020]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenTro1 plot xenTro1]
 |-
-| 415
+| 437
 | 2006
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro2 xenTro2]
@@ Line 5,667: / Line 6,073: @@
 | style='text-align:right'| 219
 | style='text-align:right'| 2820134241
-| 548,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro2&tanDups=pack&position=scaffold_68:2539823-2540919 scaffold_68:2539823-2540919]
+| 548,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro2&tanDups=pack&gap=dense&position=scaffold_68:2539823-2540919 scaffold_68:2539823-2540919]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenTro2 plot xenTro2]
 |-
-| 416
+| 438
 | 2011
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro3 xenTro3]
@@ Line 5,681: / Line 6,087: @@
 | style='text-align:right'| 219
 | style='text-align:right'| 2819484140
-| 548,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro3&tanDups=pack&position=GL172704:2539823-2540919 GL172704:2539823-2540919]
+| 548,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro3&tanDups=pack&gap=dense&position=GL172704:2539823-2540919 GL172704:2539823-2540919]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenTro3 plot xenTro3]
 |-
-| 417
+| 439
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
@@ Line 5,695: / Line 6,101: @@
 | style='text-align:right'| 229
 | style='text-align:right'| 2808691507
-| 3560,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7&tanDups=pack&position=KB021656:75384527-75391648 KB021656:75384527-75391648]
+| 3560,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7&tanDups=pack&gap=dense&position=KB021656:75384527-75391648 KB021656:75384527-75391648]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenTro7 plot xenTro7]
 |-
-| 418
+| 440
 | 2016
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro9 xenTro9]
@@ Line 5,709: / Line 6,115: @@
 | style='text-align:right'| 241
 | style='text-align:right'| 2585384269
-| 3560,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro9&tanDups=pack&position=chr6:35780447-35787568 chr6:35780447-35787568]
+| 3560,	2,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro9&tanDups=pack&gap=dense&position=chr6:35780447-35787568 chr6:35780447-35787568]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xenTro9 plot xenTro9]
 |-
-| 419
+| 441
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]
@@ Line 5,723: / Line 6,129: @@
 | style='text-align:right'| 506
 | style='text-align:right'| 136874274
-| 119,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1&tanDups=pack&position=JH557910:3615-3853 JH557910:3615-3853]
+| 119,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1&tanDups=pack&gap=dense&position=JH557910:3615-3853 JH557910:3615-3853]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=xipMac1 plot xipMac1]
 |-
-| 421
+| 443
 | 2013
 | style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]
@@ Line 5,737: / Line 6,143: @@
 | style='text-align:right'| 369
 | style='text-align:right'| 407868591
-| 2060,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1&tanDups=pack&position=KB913045:8123897-8128017 KB913045:8123897-8128017]
+| 2060,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1&tanDups=pack&gap=dense&position=KB913045:8123897-8128017 KB913045:8123897-8128017]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/tandemDups?db=zonAlb1 plot zonAlb1]
 |}