CGI Testing: Difference between revisions
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(New page: ==hgTracks, hgTrackUi, hgc== # The TrackCheck robot checks this pretty thoroughly # manually check anything that has been an issue during the past 2-week release cycle # to check hgTrackUi...) |
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# using the Table Browser, choose "CDS FASTA" as the output format | # using the Table Browser, choose "CDS FASTA" as the output format | ||
==hgBlat | ==hgBlat== | ||
# | # perform both a nucleotide and a protein search with default settings | ||
# | # make sure colors listed in description section are right | ||
# | # zoom in on an alignment and test "View details of parts of alignment within browser window" | ||
# | # try different sorts and output types | ||
# make sure all the buttons work, including uploading a file | |||
==hgPcr== | |||
# test some perfectly matching primers | |||
# vary settings and input primers and see if results make sense | |||
# for human and mouse browsers, test the "UCSC Genes" target | |||
==hgLiftOver, hgConvert== | ==hgLiftOver, hgConvert== |
Revision as of 19:33, 5 March 2010
hgTracks, hgTrackUi, hgc
- The TrackCheck robot checks this pretty thoroughly
- manually check anything that has been an issue during the past 2-week release cycle
- to check hgTrackUis, start from the "Track/Assebmly Overview" from the QA portal here (don't forget to click on the number of the machine that you are testing)
- click on random tracks to check them
hgGene
- Heather has a robot to check this CGI
- test one known gene - click off-site, check entire page
- test all possible paths among KG, PB, GS, VG (not that you wind up in mouse VG and need to use "Other Species" to get back to human.)
hgNear
- use the test protocol for Gene Sorter from the QA portal
hgCustom
- Test all three methods of entering a CT: typed in, uploaded by file, URL.
- Test editing, deleting, adding, updating, HTML docs, etc.
- Test CTs in relation to the Table Browser.
hgVisiGene
- test the search box by entering a gene name
- check the zoom buttons
- check that the "Gene" link opens the correct gene details page, and that that "visiGene" link in that gene details page retrieves the correct images in visiGene
- pick an image and check all of the links for that page
- for images composed of several smaller images, check that the pane descriptions are displaying correctly
- (Note: the images from Mahoney are a subset of the MGI/Jax images. The Mahoney images should list two sources and should show two sets of acknowledgements.)
hgTables
- check all drop-downs
- press on summary/stats button
- do an intersection with a couple of different output formats
- create a custom track in the browser
hgPal
- check a "Protein FASTA" click-through from a UCSC Gene details page
- check a "CDS FASTA" click-through from a RefSeq Genes details page
- using the Table Browser, choose "CDS FASTA" as the output format
hgBlat
- perform both a nucleotide and a protein search with default settings
- make sure colors listed in description section are right
- zoom in on an alignment and test "View details of parts of alignment within browser window"
- try different sorts and output types
- make sure all the buttons work, including uploading a file
hgPcr
- test some perfectly matching primers
- vary settings and input primers and see if results make sense
- for human and mouse browsers, test the "UCSC Genes" target
hgLiftOver, hgConvert
- Test cases available in the database on hgwdev: qa.liftOverTestCases
pbGateway, pbGlobal, pbTracks
- general testing; click around
- enter a protein symbol
- review results page
- click into pbGlobal and check display
hgSession
hgGenome
cartDump, cartReset
- check cart
- reset cart
- check cart again
See also: cart test protocol