Other genome browsers: Difference between revisions
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(→Other genome browsers: added a couple new browsers for Rice and Arabidopsis) |
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* [http://www.gramene.org/ gramene.org] many rice genomes and other grasses | * [http://www.gramene.org/ gramene.org] many rice genomes and other grasses | ||
* [http://www.ricemap.org/ Rice-Map] | |||
* [http://www.genome.arizona.edu/fpc/rice/gbrowse/ RICE FPC Genome Browser] from the Arizona Genomics Institute (AGI) | |||
* [http://eyebrowse.cit.nih.gov/index.html Eyebrowse] specializing in eye tissue sequences | * [http://eyebrowse.cit.nih.gov/index.html Eyebrowse] specializing in eye tissue sequences | ||
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* [http://altair.dartmouth.edu/cgi-bin/hgGateway?org=A.+thaliana&db=araTha9&hgsid=876/ Arabidopsis] genome browser at Dartmouth. | * [http://altair.dartmouth.edu/cgi-bin/hgGateway?org=A.+thaliana&db=araTha9&hgsid=876/ Arabidopsis] genome browser at Dartmouth. | ||
* [http://atensembl.arabidopsis.info/index.html Arabidopsis] Ensembl genome browser | |||
* [http://www.jcvi.org/research/huref/ Craig Venter] genome data release | * [http://www.jcvi.org/research/huref/ Craig Venter] genome data release | ||
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* [http://www.animalgenome.org/ NRSP-8] National Animal Genome Research Program - Bioinformatics Coordination Program | * [http://www.animalgenome.org/ NRSP-8] National Animal Genome Research Program - Bioinformatics Coordination Program | ||
* [http://epigenome.wustl.edu/ Epigenomics] Epigenomics Roadmap mirror at Washington University, St. Louis. | * [http://epigenome.wustl.edu/ Epigenomics] Epigenomics Roadmap mirror at Washington University, St. Louis. | ||
* [http://genome.ccbr.utoronto.ca/ Cannabis sativa] Cannabis browser at U Toronto | * [http://genome.ccbr.utoronto.ca/ Cannabis sativa] Cannabis browser at U Toronto | ||
Revision as of 18:51, 18 June 2012
UCSC Genome mirror sites
- Medical College of Wisconsin Milwaukee, WI
- Duke University Durham, NC
- Cornell University Ithaca, NY
- Aarhus University The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark
- Australia Queensland Facility for Advanced Bioinformatics (QFAB)
Other genome browsers
- gramene.org many rice genomes and other grasses
- RICE FPC Genome Browser from the Arizona Genomics Institute (AGI)
- Eyebrowse specializing in eye tissue sequences
- 1000 Genomes A Deep Catalog of Human Genetic Variation
- NONCODE genome browser. UCSC browser with special tracks for non-coding annotations.
- Jim Watson genome browser at CSHL
- Arabidopsis genome browser at UCLA
- Arabidopsis genome browser at Dartmouth.
- Arabidopsis Ensembl genome browser
- Craig Venter genome data release
- GARFIELD cat genome browser, Federick, MD
- dbRIP - Retroposon Insertions Roswell Park Cancer Institute, MD
- S pombe (fission yeast) at NCI, NIH
- Vista Lawrence Berkeley Lab, CA
- Zea mays Maize Genome Sequencing Project
- Saccharomyces cerevisiae database and genome browser
- Silkworm Bombyx mori, China
- C. intestinalis: UCSC-based, Gbrowse
- Paramecium tetraurelia Genoscope, France
- The JGI-browser for various species: Fugu, C.intestinalis, waterflea, sponge, amphioxus, snail, hydra, etc...
- Bio2Rdf Semantic web atlas of postgenomic knowledge about human and mouse
- JPGV Jena Prokaryotic Genome Browser
- NRSP-8 National Animal Genome Research Program - Bioinformatics Coordination Program
- Epigenomics Epigenomics Roadmap mirror at Washington University, St. Louis.
- Cannabis sativa Cannabis browser at U Toronto
- plants UNLV Las Vegas
