Other genome browsers: Difference between revisions
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=== Yeast Browsers === | === Yeast Browsers === | ||
* [http://www.yeastgenome.org/ Saccharomyces cerevisiae] database and [http://db.yeastgenome.org/cgi-bin/gbrowse/scgenome/ genome browser] | * [http://www.yeastgenome.org/ Saccharomyces cerevisiae] database and [http://db.yeastgenome.org/cgi-bin/gbrowse/scgenome/ genome browser] | ||
* [http://pombe.nci.nih.gov/genome/ S. pombe] (fission yeast) at NCI, NIH | |||
=== Other === | === Other === | ||
Revision as of 20:13, 18 June 2012
UCSC Genome mirror sites
- Medical College of Wisconsin Milwaukee, WI
- Duke University Durham, NC
- Cornell University Ithaca, NY
- Aarhus University The Department of Molecular Medicine (MOMA) at Aarhus University, Denmark
- Australia Queensland Facility for Advanced Bioinformatics (QFAB)
Non-UCSC Mirror Browsers
Animal Browsers
- 1000 Genomes A Deep Catalog of Human Genetic Variation
- NONCODE genome browser. UCSC browser with special tracks for non-coding annotations.
- Jim Watson genome browser at CSHL
- Craig Venter genome data release
- dbRIP - Retroposon Insertions Roswell Park Cancer Institute, MD
- Vista Lawrence Berkeley Lab, CA
- GARFIELD cat genome browser, Federick, MD
- C. intestinalis: UCSC-based, Gbrowse
- The JGI-browser for various species: Fugu, C.intestinalis, waterflea, sponge, amphioxus, snail, hydra, etc...
- Bio2Rdf Semantic web atlas of postgenomic knowledge about human and mouse
- Silkworm Bombyx mori, China
- Epigenomics Epigenomics Roadmap mirror at Washington University, St. Louis.
- Eyebrowse specializing in eye tissue sequences
- NRSP-8 National Animal Genome Research Program - Bioinformatics Coordination Program
Plant Browsers
- Arabidopsis genome browser at UCLA
- Arabidopsis genome browser at Dartmouth.
- Arabidopsis Ensembl genome browser
- UNLV Las Vegas Genome Browser hosting D. melanogaster and several plant genomes: Arabidopsis, rice, sorghum and soybean.
- gramene.org many rice genomes and other grasses
- RICE FPC Genome Browser from the Arizona Genomics Institute (AGI)
- Zea mays Maize Genome Sequencing Project
- Cannabis sativa Cannabis browser at U Toronto
Yeast Browsers
- Saccharomyces cerevisiae database and genome browser
- S. pombe (fission yeast) at NCI, NIH
Other
- Paramecium tetraurelia Genoscope, France
- JPGV Jena Prokaryotic Genome Browser
