High Throughput Genome Builds: Difference between revisions
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==Input Requirements== | ==Input Requirements== | ||
AGP File | AGP File, Sequence | ||
Sequence | |||
==Output Tracks== | ==Output Tracks== | ||
Gap | Gap. Gold, ChromInfo, GC5 | ||
==Then Repeat Masking/Window Masker and trfBig== | |||
Produces rmsk/windowMask and simpleRepeats track | |||
==Early Tracks== | |||
Genscan, Genbank Scripts, CpG Islands | |||
==Map Closest protein set (human mostly)== | |||
==Comparative Genomics== | |||
human and mouse | |||
Revision as of 21:42, 30 May 2006
Input Requirements
AGP File, Sequence
Output Tracks
Gap. Gold, ChromInfo, GC5
Then Repeat Masking/Window Masker and trfBig
Produces rmsk/windowMask and simpleRepeats track
Early Tracks
Genscan, Genbank Scripts, CpG Islands
Map Closest protein set (human mostly)
Comparative Genomics
human and mouse
