User:Kate: Difference between revisions
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== Current Projects == | == Current Projects == | ||
* [http://genome.ucsc.edu/ENCODE ENCODE at UCSC] – I'm the UCSC staff point-person for the [http://www.genome.gov/10005107 ENCODE Project] | * [http://genome.ucsc.edu/ENCODE ENCODE at UCSC] – I'm the UCSC staff point-person for the [http://www.genome.gov/10005107 ENCODE Project] [[Image:encodelogo.gif|right|px 50]] | ||
* Custom tracks management interface – allows users to add/remove/update/doc | * Custom tracks management interface – allows users to add/remove/update/doc | ||
* Comparative genomics track enhancements - chain/net mega-tracks, alternate conseravation scores | * Comparative genomics track enhancements - chain/net mega-tracks, alternate conseravation scores | ||
Revision as of 01:27, 1 September 2006
I've been a UCSC staff genome browser software developer since April 2003. Before that, I worked in the software industry for several decades, working primarily in scientific and technological applications areas. It's great to be able to apply my Unix/C/programming expertise to my favorite application area -- Human Biology (which was actually my major in college). Unfortunately, we didn't have introns then... Kate Rosenbloom
Current Projects
- ENCODE at UCSC – I'm the UCSC staff point-person for the ENCODE Project
- Custom tracks management interface – allows users to add/remove/update/doc
- Comparative genomics track enhancements - chain/net mega-tracks, alternate conseravation scores
- ENCODE MSA tracks – 23-species aligned with 3 algorithms, nearly ready to release
- Composite track features – multiple configuration panels for mixed-types
Past Projects
- Chimpanzee genome browsers
- Composite track implementation
- Multiple alignments and conservation scoring
- ENCODE orthologous region sequences
- Coordinate conversion web utility (hgLiftOver)
- Conservation track display
- Fugu genome browser
