Dm6 124-way conservation alignment: Difference between revisions
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==see also== | ==see also== | ||
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<TD>N/A</TD><TD ALIGN=RIGHT>98.737%</TD> | <TD>N/A</TD><TD ALIGN=RIGHT>98.737%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/754/195/GCF_000754195.2_ASM75419v2/ 02]</TH><TH>droSim2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000754195.2/ Drosophila<BR>simulans]</TD><TD>D. simulans</TD> | ||
<TD> | <TD>Sep. 2014 (ASM75419v2/droSim2)</TD> | ||
<TD> | <TD>Princeton University</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>2016-11-01</TD> | ||
<TD ALIGN=RIGHT>2016-11-01</TD> | |||
<TD>2018-09-12</TD><TD ALIGN=RIGHT>82.570%</TD> | |||
</TR><TR> | |||
<TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 03]</TH><TH>droSec1</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/215/GCF_000005215v3_dsec_caf1/ Drosophila<BR>sechellia]</TD><TD>D. sechellia</TD> | |||
<TD>Oct. 2005 (Broad/droSec1)</TD> | |||
<TD>Broad 28 Oct. 2005</TD> | |||
<TD ALIGN=RIGHT>2009-08-14</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>82.561%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 04]</TH><TH>droEre2</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/135/GCF_000005135v1_dere_caf1/ Drosophila<BR>erecta]</TD><TD>D. erecta</TD> | ||
<TD> | <TD>Feb. 2006 (Agencourt CAF1/droEre2)</TD> | ||
<TD> | <TD>Agencourt CAF1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>80.023%</TD> | ||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/005/975/GCA_000005975.1_dyak_caf1/ 05]</TH><TH>droYak3</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000005975.1/ Drosophila<BR>yakuba]</TD><TD>D. yakuba</TD> | |||
<TD>27 Jun 2006 (dyak_caf1/droYak3)</TD> | |||
<TD>FlyBase GCA_000005975.1</TD> | |||
<TD ALIGN=RIGHT>2014-06-17</TD> | |||
<TD ALIGN=RIGHT>2014-06-17</TD> | |||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>80.562%</TD> | |||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/220/665/GCA_000220665.2_Dfic_2.0/ 06]</TH><TH>droFic2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000220665.2/ Drosophila<BR>ficusphila]</TD><TD>D. ficusphila</TD> | ||
<TD> | <TD>04 Mar 2013 (Dfic_2.0/droFic2)</TD> | ||
<TD> | <TD>Baylor College of Medicine GCA_000220665.2</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>74.740%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/325/GCA_000236325.2_Deug_2.0/ 07]</TH><TH>droEug2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000236325.2/ Drosophila<BR>eugracilis]</TD><TD>D. eugracilis</TD> | ||
<TD> | <TD>04 Mar 2013 (Deug_2.0/droEug2)</TD> | ||
<TD>The modENCODE Project | <TD>The modENCODE Project GCA_000236325.2</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>75.265%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/415/GCA_000233415.2_Dbia_2.0/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/233/415/GCA_000233415.2_Dbia_2.0/ 08]</TH><TH>droBia2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000233415.2/ Drosophila<BR>biarmipes]</TD><TD>D. biarmipes</TD> | ||
<TD>04 Mar 2013 (Dbia_2.0/droBia2)</TD> | <TD>04 Mar 2013 (Dbia_2.0/droBia2)</TD> | ||
<TD>Baylor College of Medicine GCA_000233415.2</TD> | <TD>Baylor College of Medicine GCA_000233415.2</TD> | ||
| Line 68: | Line 81: | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>75.042%</TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>75.042%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/472/105/GCA_000472105.1_Dsuzukii.v01/ 09]</TH><TH>droSuz1</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000472105.1/ Drosophila<BR>suzukii]</TD><TD>D. suzukii</TD> | ||
<TD> | <TD>30 Sep 2013 (Dsuzukii.v01/droSuz1)</TD> | ||
<TD> | <TD>BGI GCA_000472105.1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>74.591%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/235/GCA_000224235.2_Dtak_2.0/ 10]</TH><TH>droTak2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000224235.2/ Drosophila<BR>takahashii]</TD><TD>D. takahashii</TD> | ||
<TD> | <TD>04 Mar 2013 (Dtak_2.0/droTak2)</TD> | ||
<TD> | <TD>Baylor College of Medicine GCA_000224235.2</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>75.507%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/195/GCA_000224195.2_Dele_2.0/ 11]</TH><TH>droEle2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000224195.2/ Drosophila<BR>elegans]</TD><TD>D. elegans</TD> | ||
<TD>04 Mar 2013 ( | <TD>04 Mar 2013 (Dele_2.0/droEle2)</TD> | ||
<TD>Baylor College of Medicine | <TD>Baylor College of Medicine GCA_000224195.2</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>75.445%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/305/GCA_000236305.2_Drho_2.0/ 12]</TH><TH>droRho2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000236305.2/ Drosophila<BR>rhopaloa]</TD><TD>D. rhopaloa</TD> | ||
<TD> | <TD>22 Feb 2013 (Drho_2.0/droRho2)</TD> | ||
<TD> | <TD>The modENCODE Project GCA_000236305.2</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>74.940%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/093/755/GCF_002093755.1_Dser1.0/ 13]</TH><TH>D_serrata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_002093755.1/ Drosophila serrata]</TD><TD>D_serrata</TD> | ||
<TD> | <TD>2017-4-14 (GCF_002093755.1)</TD> | ||
<TD> | <TD>The University of Queensland/Dser1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%35.57</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>70.419%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/215/GCA_000224215.2_Dkik_2.0/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/224/215/GCA_000224215.2_Dkik_2.0/ 14]</TH><TH>droKik2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000224215.2/ Drosophila<BR>kikkawai]</TD><TD>D. kikkawai</TD> | ||
<TD>04 Mar 2013 (Dkik_2.0/droKik2)</TD> | <TD>04 Mar 2013 (Dkik_2.0/droKik2)</TD> | ||
<TD>Baylor College of Medicine GCA_000224215.2</TD> | <TD>Baylor College of Medicine GCA_000224215.2</TD> | ||
| Line 110: | Line 123: | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>70.590%</TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>70.590%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 15]</TH><TH>droAna3</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/115/GCF_000005115v1_dana_caf1/ Drosophila<BR>ananassae]</TD><TD>D. ananassae</TD> | ||
<TD> | <TD>Feb. 2006 (Agencourt CAF1/droAna3)</TD> | ||
<TD> | <TD>Agencourt CAF1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>67.282%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/236/285/GCA_000236285.2_Dbip_2.0/ 16]</TH><TH>droBip2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000236285.2/ Drosophila<BR>bipectinata]</TD><TD>D. bipectinata</TD> | ||
<TD>04 Mar 2013 ( | <TD>04 Mar 2013 (Dbip_2.0/droBip2)</TD> | ||
<TD>Baylor College of Medicine | <TD>Baylor College of Medicine GCA_000236285.2</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT>2014-06-18</TD> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>65.865%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/245/395/GCA_001245395.1_D._americana_H5_strain_genome_assembly/ 17]</TH><TH>D_americana</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001245395.1/ Drosophila americana]</TD><TD>D_americana</TD> | ||
<TD>2015- | <TD>2015-10-2 (GCA_001245395.1)</TD> | ||
<TD> | <TD>IBMC/D._americana_H5_strain_genome_assembly</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%27.87</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>45.382%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/285/875/GCA_003285875.1_DnovRS1/ 18]</TH><TH>D_novamexicana</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003285875.1/ Drosophila novamexicana]</TD><TD>D_novamexicana</TD> | ||
<TD> | <TD>2018-7-2 (GCA_003285875.1)</TD> | ||
<TD> | <TD>the University of Chicago/DnovRS1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%32.08</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>48.568%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 19]</TH><TH>droVir3</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/245/GCF_000005245v1_dvir_caf1/ Drosophila<BR>virilis]</TD><TD>D. virilis</TD> | ||
<TD>Feb. 2006 (Agencourt CAF1/droVir3)</TD> | |||
<TD>Agencourt CAF1</TD> | |||
<TD ALIGN=RIGHT>2009-09-02</TD> | |||
<TD> | |||
<TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>51.937%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/086/615/GCA_003086615.1_ASM308661v1/ 20]</TH><TH>D_montana</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003086615.1/ Drosophila montana]</TD><TD>D_montana</TD> | ||
<TD> | <TD>2018-5-2 (GCA_003086615.1)</TD> | ||
<TD> | <TD>University of St. Andrews/ASM308661v1</TD> | ||
<TD ALIGN=RIGHT>%35 | <TD ALIGN=RIGHT>%27.35</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>45.270%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/654/025/GCF_001654025.1_ASM165402v1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/654/025/GCF_001654025.1_ASM165402v1/ 21]</TH><TH>D_arizonae</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001654025.1/ Drosophila arizonae]</TD><TD>D_arizonae</TD> | ||
<TD>2016-5-9 (GCF_001654025.1)</TD> | <TD>2016-5-9 (GCF_001654025.1)</TD> | ||
<TD>Biotechnology Institute of UNAM/ASM165402v1</TD> | <TD>Biotechnology Institute of UNAM/ASM165402v1</TD> | ||
| Line 180: | Line 172: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>41.792%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>41.792%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 22]</TH><TH>droMoj3</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/175/GCF_000005175v2_dmoj_caf1/ Drosophila<BR>mojavensis]</TD><TD>D. mojavensis</TD> | ||
<TD> | <TD>Feb. 2006 (Agencourt CAF1/droMoj3)</TD> | ||
<TD> | <TD>Agencourt CAF1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD ALIGN=RIGHT>2014- | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>50.132%</TD> | ||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/654/015/GCF_001654015.1_ASM165401v1/ 23]</TH><TH>D_navojoa</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001654015.1/ Drosophila navojoa]</TD><TD>D_navojoa</TD> | |||
<TD>2016-5-9 (GCF_001654015.1)</TD> | |||
<TD>Biotechnology Institute of UNAM/ASM165401v1</TD> | |||
<TD ALIGN=RIGHT>%30.77</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>36.286%</TD> | |||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/780/465/GCF_002780465.1_ASM278046v1/ 24]</TH><TH>D_hydei</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_002780465.1/ Drosophila hydei]</TD><TD>D_hydei</TD> | ||
<TD> | <TD>2017-11-16 (GCF_002780465.1)</TD> | ||
<TD> | <TD>University of California Davis/ASM278046v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%28.99</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>45.605%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/277/935/GCF_001277935.1_ASM127793v1/ 25]</TH><TH>D_busckii</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001277935.1/ Drosophila busckii]</TD><TD>D_busckii</TD> | ||
<TD> | <TD>2015-9-2 (GCF_001277935.1)</TD> | ||
<TD> | <TD>University of California, Berkeley/ASM127793v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%33.85</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>42.220%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 26]</TH><TH> | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 26]</TH><TH>droGri2</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/155/GCF_000005155v2_dgri_caf1/ Drosophila<BR>grimshawi]</TD><TD>D. grimshawi</TD> | ||
<TD>Feb. 2006 (Agencourt CAF1/ | <TD>Feb. 2006 (Agencourt CAF1/droGri2)</TD> | ||
<TD>Agencourt CAF1</TD> | <TD>Agencourt CAF1</TD> | ||
<TD ALIGN=RIGHT>2009-09-02</TD> | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>50.979%</TD> | ||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/185/025/GCA_003185025.1_ASM318502v1/ 27]</TH><TH>D_athabasca</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003185025.1/ Drosophila athabasca]</TD><TD>D_athabasca</TD> | |||
<TD>2018-6-8 (GCA_003185025.1)</TD> | |||
<TD>UC Berkeley/ASM318502v1</TD> | |||
<TD ALIGN=RIGHT>%25.05</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>54.625%</TD> | |||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/765/GCF_000001765.3_Dpse_3.0/ 28]</TH><TH>D_pseudoobscura_1</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000001765.3/ Drosophila pseudoobscura pseudoobscura]</TD><TD>D_pseudoobscura_1</TD> | ||
<TD> | <TD>2013-4-11 (GCF_000001765.3)</TD> | ||
<TD> | <TD>Baylor College of Medicine/Dpse_3.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%23.67</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>59.426%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/505/GCA_000269505.2_DroMir_2.2/ 29]</TH><TH>droMir2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000269505.2/ Drosophila<BR>miranda]</TD><TD>D. miranda</TD> | ||
<TD> | <TD>19 Apr 2013 (DroMir_2.2/droMir2)</TD> | ||
<TD> | <TD>University of California, Berkeley GCA_000269505.2</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2014-06-18</TD> | ||
<TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>59.308%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 30]</TH><TH>droPer1</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/195/GCF_000005195v2_dper_caf1/ Drosophila<BR>persimilis]</TD><TD>D. persimilis</TD> | ||
<TD>Oct. 2005 (Broad/ | <TD>Oct. 2005 (Broad/droPer1)</TD> | ||
<TD>Broad 28 Oct. 2005</TD> | <TD>Broad 28 Oct. 2005</TD> | ||
<TD ALIGN=RIGHT>2009-08- | <TD ALIGN=RIGHT>2009-08-15</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>59.049%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/765/GCA_000001765.2_Dpse_3.0/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/765/GCA_000001765.2_Dpse_3.0/ 31]</TH><TH>droPse3</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000001765.2/ Drosophila<BR>pseudoobscura<BR>pseudoobscura]</TD><TD>D. pseudoobscura</TD> | ||
<TD>11 Apr 2013 (Dpse_3.0/droPse3)</TD> | <TD>11 Apr 2013 (Dpse_3.0/droPse3)</TD> | ||
<TD>Baylor College of Medicine GCA_000001765.2</TD> | <TD>Baylor College of Medicine GCA_000001765.2</TD> | ||
| Line 236: | Line 242: | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>59.836%</TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>59.836%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/749/795/GCA_002749795.1_Dsub_1.0/ 32]</TH><TH>D_subobscura</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002749795.1/ Drosophila subobscura]</TD><TD>D_subobscura</TD> | ||
<TD> | <TD>2017-11-3 (GCA_002749795.1)</TD> | ||
<TD> | <TD>Faculdade de Ciencias, Universidade de Lisboa/Dsub_1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%22.71</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>55.249%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/217/835/GCF_002217835.1_Dobs_1.0/ 33]</TH><TH>D_obscura</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_002217835.1/ Drosophila obscura]</TD><TD>D_obscura</TD> | |||
<TD>2017-7-1 (GCF_002217835.1)</TD> | |||
<TD>Laboratory for DNA Data Anaysis, Center for Information Biology, National Institute of Genetics/Dobs_1.0</TD> | |||
<TD ALIGN=RIGHT>%25.96</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>61.561%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/752/445/GCA_001752445.1_ZP_IN_1.0/ 34]</TH><TH>Zaprionus_indianus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001752445.1/ Zaprionus indianus]</TD><TD>Zaprionus_indianus</TD> | |||
<TD>2016-10-4 (GCA_001752445.1)</TD> | |||
<TD>not applicable/ZP_IN_1.0</TD> | |||
<TD ALIGN=RIGHT>%25.45</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>36.928%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/222/885/GCA_002222885.1_ASM222288v1/ 35]</TH><TH>D_nasuta</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002222885.1/ Drosophila nasuta]</TD><TD>D_nasuta</TD> | ||
<TD> | <TD>2017-7-20 (GCA_002222885.1)</TD> | ||
<TD> | <TD>Jaypee Institute of Information Technology/ASM222288v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%30.04</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>39.549%</TD> | ||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/335/GCA_000298335.1_DroAlb_1.0/ 36]</TH><TH>droAlb1</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000298335.1/ Drosophila<BR>albomicans]</TD><TD>D. albomicans</TD> | |||
<TD>21 May 2012 (DroAlb_1.0/droAlb1)</TD> | |||
<TD>Kunming Institute of Zoology, Chinese Academy of Sciences GCA_000298335.1</TD> | |||
<TD ALIGN=RIGHT>2014-06-17</TD> | |||
<TD ALIGN=RIGHT>2014-06-17</TD> | |||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>44.544%</TD> | |||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/285/725/GCA_003285725.1_SlebRS1/ 37]</TH><TH>Scaptodrosophila_lebanonensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003285725.1/ Scaptodrosophila lebanonensis]</TD><TD>Scaptodrosophila_lebanonensis</TD> | ||
<TD> | <TD>2018-7-2 (GCA_003285725.1)</TD> | ||
<TD> | <TD>the University of Chicago/SlebRS1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%32.14</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>42.552%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/415/GCA_001014415.1_ASM101441v1/ 38]</TH><TH>Phortica_variegata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014415.1/ Phortica variegata]</TD><TD>Phortica_variegata</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014415.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101441v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%34.86</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>24.774%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/005/925/GCA_000005925.1_dwil_caf1/ 39]</TH><TH>droWil2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000005925.1/ Drosophila<BR>willistoni]</TD><TD>D. willistoni</TD> | ||
<TD> | <TD>03 Aug 2006 (dwil_caf1/droWil2)</TD> | ||
<TD> | <TD>J. Craig Venter Institute GCA_000005925.1</TD> | ||
<TD ALIGN=RIGHT>2014-06- | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD ALIGN=RIGHT>2014-06- | <TD ALIGN=RIGHT>2014-06-17</TD> | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>51.432%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/935/GCA_001014935.1_ASM101493v1/ 40]</TH><TH>Liriomyza_trifolii</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014935.1/ Liriomyza trifolii]</TD><TD>Liriomyza_trifolii</TD> | ||
<TD> | <TD>2015-5-29 (GCA_001014935.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101493v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%36.26</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>9.358%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/115/GCA_001015115.1_ASM101511v1/ 41]</TH><TH>Eutreta_diana</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015115.1/ Eutreta diana]</TD><TD>Eutreta_diana</TD> | ||
<TD> | <TD>2015-5-29 (GCA_001015115.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101511v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%25.67</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.427%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/665/GCA_001014665.1_ASM101466v1/ 42]</TH><TH>Trupanea_jonesi</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014665.1/ Trupanea jonesi]</TD><TD>Trupanea_jonesi</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014665.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101466v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%26.44</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>7.450%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/515/GCA_001017515.1_ASM101751v1/ 43]</TH><TH>Tephritis_californica</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001017515.1/ Tephritis californica]</TD><TD>Tephritis_californica</TD> | ||
<TD> | <TD>2015-6-1 (GCA_001017515.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101751v1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%30.68</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.995%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/015/335/GCF_001015335.1_Stomoxys_calcitrans-1.0.1/ 44]</TH><TH>Stomoxys_calcitrans</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001015335.1/ Stomoxys calcitrans]</TD><TD>Stomoxys_calcitrans</TD> | ||
<TD> | <TD>2015-5-31 (GCF_001015335.1)</TD> | ||
<TD> | <TD>Glossina Genomes Consortium/Stomoxys_calcitrans-1.0.1</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%56.94</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>18.152%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/425/GCA_001014425.1_ASM101442v1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/425/GCA_001014425.1_ASM101442v1/ 45]</TH><TH>Trichoceridae_BV_2014</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014425.1/ Trichoceridae sp. BV-2014]</TD><TD>Trichoceridae_BV_2014</TD> | ||
<TD>2015-5-28 (GCA_001014425.1)</TD> | <TD>2015-5-28 (GCA_001014425.1)</TD> | ||
<TD>UC Berkeley/ASM101442v1</TD> | <TD>UC Berkeley/ASM101442v1</TD> | ||
| Line 313: | Line 340: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>3.974%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>3.974%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/985/GCA_001932985.1_200kmer_750.trimmed/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/932/985/GCA_001932985.1_200kmer_750.trimmed/ 46]</TH><TH>Proctacanthus_coquilletti</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001932985.1/ Proctacanthus coquilletti]</TD><TD>Proctacanthus_coquilletti</TD> | ||
<TD>2017-1-4 (GCA_001932985.1)</TD> | <TD>2017-1-4 (GCA_001932985.1)</TD> | ||
<TD>Smithsonian Institution, National Museum of Natural History/200kmer_750.trimmed</TD> | <TD>Smithsonian Institution, National Museum of Natural History/200kmer_750.trimmed</TD> | ||
| Line 320: | Line 347: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>14.594%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>14.594%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[http://www.ncbi.nlm.nih.gov/assembly/{otherAccession}/ 47]</TH><TH>triCas2</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/bay/orT/cas/200/baylorTcas20050914_baylor2.0/ Tribolium<BR>castaneum]</TD><TD>T. castaneum</TD> | ||
<TD>2015-5- | <TD>Sep. 2005 (Baylor 2.0/triCas2)</TD> | ||
<TD>UC Berkeley/ | <TD>Baylor</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>2009-09-02</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>14.092%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/505/GCA_001014505.1_ASM101450v1/ 48]</TH><TH>Chironomus_riparius</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014505.1/ Chironomus riparius]</TD><TD>Chironomus_riparius</TD> | |||
<TD>2015-5-28 (GCA_001014505.1)</TD> | |||
<TD>UC Berkeley/ASM101450v1</TD> | |||
<TD ALIGN=RIGHT>%34.64</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>9.683%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/786/525/GCA_000786525.1_CT01/ 49]</TH><TH>Chironomus_tentans</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000786525.1/ Chironomus tentans]</TD><TD>Chironomus_tentans</TD> | |||
<TD>2014-11-7 (GCA_000786525.1)</TD> | |||
<TD>SciLifeLab/CT01</TD> | |||
<TD ALIGN=RIGHT>%38.84</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>9.943%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/005/825/GCA_900005825.1_CLUMA_1.0/ 50]</TH><TH>Clunio_marinus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_900005825.1/ Clunio marinus]</TD><TD>Clunio_marinus</TD> | |||
<TD>2016-11-28 (GCA_900005825.1)</TD> | |||
<TD>MAX F. PERUTZ LABORATORIES/CLUMA_1.0</TD> | |||
<TD ALIGN=RIGHT>%30.83</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>10. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.684%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/265/325/GCA_000265325.1_Llon_1.0/ 51]</TH><TH>Lutzomyia_longipalpis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000265325.1/ Lutzomyia longipalpis]</TD><TD>Lutzomyia_longipalpis</TD> | ||
<TD> | <TD>2012-6-11 (GCA_000265325.1)</TD> | ||
<TD> | <TD>Baylor College of Medicine/Llon_1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%36.09</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.883%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/262/795/GCA_000262795.1_Ppap_1.0/ 52]</TH><TH>Phlebotomus_papatasi</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000262795.1/ Phlebotomus papatasi]</TD><TD>Phlebotomus_papatasi</TD> | ||
<TD> | <TD>2012-5-16 (GCA_000262795.1)</TD> | ||
<TD> | <TD>Washington University Genome Sequencing Center/Ppap_1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%45.25</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.066%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/335/GCA_001014335.1_ASM101433v1/ 53]</TH><TH>Coboldia_fuscipes</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014335.1/ Coboldia fuscipes]</TD><TD>Coboldia_fuscipes</TD> | ||
<TD>2015-5-28 ( | <TD>2015-5-28 (GCA_001014335.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101433v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%34.13</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.908%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/149/185/GCA_000149185.1_Mdes_1.0/ 54]</TH><TH>Mayetiola_destructor</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000149185.1/ Mayetiola destructor]</TD><TD>Mayetiola_destructor</TD> | ||
<TD> | <TD>2010-10-18 (GCA_000149185.1)</TD> | ||
<TD> | <TD>Baylor College of Medicine/Mdes_1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%36.15</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.512%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/945/GCA_001014945.1_ASM101494v1/ 55]</TH><TH>Clogmia_albipunctata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014945.1/ Clogmia albipunctata]</TD><TD>Clogmia_albipunctata</TD> | ||
<TD> | <TD>2015-5-29 (GCA_001014945.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101494v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%43.24</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.098%</TD> | ||
</TR><TR> | |||
<TH>[ 56]</TH><TH>apiMel4</TH><TD>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/invertebrates/Apis_mellifera/Amel_4.5/ Apis<BR>mellifera]</TD><TD>A. mellifera</TD> | |||
<TD>04 Nov 2010 (Amel_4.5/apiMel4)</TD> | |||
<TD>Baylor College of Medicine </TD> | |||
<TD ALIGN=RIGHT>2013-12-02</TD> | |||
<TD ALIGN=RIGHT>2013-12-02</TD> | |||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>8.183%</TD> | |||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/789/215/GCF_000789215.1_ASM78921v2/ 57]</TH><TH>Bactrocera_dorsalis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000789215.1/ Bactrocera dorsalis]</TD><TD>Bactrocera_dorsalis</TD> | ||
<TD> | <TD>2014-12-3 (GCF_000789215.1)</TD> | ||
<TD> | <TD>USDA-ARS/ASM78921v2</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%32.02</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>19.222%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/853/355/GCF_001853355.1_ASM185335v1/ 58]</TH><TH>Bactrocera_latifrons</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001853355.1/ Bactrocera latifrons]</TD><TD>Bactrocera_latifrons</TD> | ||
<TD> | <TD>2016-10-25 (GCF_001853355.1)</TD> | ||
<TD> | <TD>USDA-ARS/ASM185335v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%35.57</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>20.469%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/695/345/GCA_000695345.1_Assembly_2.2_of_Bactrocera_tryoni_genome/ 59]</TH><TH>Bactrocera_tryoni</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000695345.1/ Bactrocera tryoni]</TD><TD>Bactrocera_tryoni</TD> | ||
<TD> | <TD>2014-5-21 (GCA_000695345.1)</TD> | ||
<TD> | <TD>Queensland Fruit Fly Consortium/Assembly_2.2_of_Bactrocera_tryoni_genome</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%37.41</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>19.523%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/188/975/GCF_001188975.1_gapfilled_joined_lt9474.gt500.covgt10/ 60]</TH><TH>Bactrocera_oleae</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001188975.1/ Bactrocera oleae]</TD><TD>Bactrocera_oleae</TD> | ||
<TD>2015- | <TD>2015-7-29 (GCF_001188975.1)</TD> | ||
<TD> | <TD>McGill University/gapfilled_joined_lt9474.gt500.covgt10</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%37.62</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>20.400%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/806/345/GCF_000806345.1_ASM80634v1/ 61]</TH><TH>Zeugodacus_cucurbitae</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000806345.1/ Zeugodacus cucurbitae]</TD><TD>Zeugodacus_cucurbitae</TD> | ||
<TD> | <TD>2014-12-23 (GCF_000806345.1)</TD> | ||
<TD> | <TD>USDA ARS/ASM80634v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%36.97</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>20.252%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/347/755/GCF_000347755.3_Ccap_2.1/ 62]</TH><TH>Ceratitis_capitata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000347755.3/ Ceratitis capitata]</TD><TD>Ceratitis_capitata</TD> | ||
<TD> | <TD>2017-11-6 (GCF_000347755.3)</TD> | ||
<TD> | <TD>The i5k Initiative/Ccap_2.1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%39.93</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>19.997%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/075/GCA_001015075.1_ASM101507v1/ 63]</TH><TH>Cirrula_hians</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015075.1/ Cirrula hians]</TD><TD>Cirrula_hians</TD> | ||
<TD>2015-5- | <TD>2015-5-29 (GCA_001015075.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101507v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%37.21</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.751%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/675/GCA_001014675.1_ASM101467v1/ 64]</TH><TH>Ephydra_gracilis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014675.1/ Ephydra gracilis]</TD><TD>Ephydra_gracilis</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014675.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101467v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%34.53</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>16.643%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/235/GCA_001015235.1_ASM101523v1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/235/GCA_001015235.1_ASM101523v1/ 65]</TH><TH>Sphyracephala_brevicornis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015235.1/ Sphyracephala brevicornis]</TD><TD>Sphyracephala_brevicornis</TD> | ||
<TD>2015-5-29 (GCA_001015235.1)</TD> | <TD>2015-5-29 (GCA_001015235.1)</TD> | ||
<TD>UC Berkeley/ASM101523v1</TD> | <TD>UC Berkeley/ASM101523v1</TD> | ||
| Line 425: | Line 480: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>14.969%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>14.969%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/735/GCA_000688735.1_Glossina_austeni-1.0.3/ 66]</TH><TH>Glossina_austeni</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000688735.1/ Glossina austeni]</TD><TD>Glossina_austeni</TD> | ||
<TD> | <TD>2014-5-12 (GCA_000688735.1)</TD> | ||
<TD> | <TD>Glossina Genomes Consortium/Glossina_austeni-1.0.3</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%34.37</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>16.948%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/515/GCA_001014515.1_ASM101451v1/ 67]</TH><TH>Glossina_morsitans_1</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014515.1/ Glossina morsitans]</TD><TD>Glossina_morsitans_1</TD> | ||
<TD>2015-5- | <TD>2015-5-28 (GCA_001014515.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101451v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%32.41</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>15.733%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/077/435/GCA_001077435.1_ASM107743v1/ 68]</TH><TH>Glossina_morsitans_2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001077435.1/ Glossina morsitans morsitans]</TD><TD>Glossina_morsitans_2</TD> | ||
<TD> | <TD>2014-3-12 (GCA_001077435.1)</TD> | ||
<TD> | <TD>Wellcome Trust Sanger Institute/ASM107743v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%33.60</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>16.954%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/688/715/GCA_000688715.1_Glossina_pallidipes-1.0.3/ 69]</TH><TH>Glossina_pallidipes</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000688715.1/ Glossina pallidipes]</TD><TD>Glossina_pallidipes</TD> | ||
<TD> | <TD>2014-5-12 (GCA_000688715.1)</TD> | ||
<TD> | <TD>Glossina Genomes Consortium/Glossina_pallidipes-1.0.3</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%33.37</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>17.101%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/735/GCA_000671735.1_Glossina_fuscipes-3.0.2/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/735/GCA_000671735.1_Glossina_fuscipes-3.0.2/ 70]</TH><TH>Glossina_fuscipes</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000671735.1/ Glossina fuscipes fuscipes]</TD><TD>Glossina_fuscipes</TD> | ||
<TD>2014-5-8 (GCA_000671735.1)</TD> | <TD>2014-5-8 (GCA_000671735.1)</TD> | ||
<TD>Glossina Genomes Consortium/Glossina_fuscipes-3.0.2</TD> | <TD>Glossina Genomes Consortium/Glossina_fuscipes-3.0.2</TD> | ||
| Line 460: | Line 515: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>17.078%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>17.078%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/775/GCA_000818775.1_Glossina_palpalis_gambiensis-2.0.1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/818/775/GCA_000818775.1_Glossina_palpalis_gambiensis-2.0.1/ 71]</TH><TH>Glossina_palpalis_gambiensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000818775.1/ Glossina palpalis gambiensis]</TD><TD>Glossina_palpalis_gambiensis</TD> | ||
<TD>2015-1-15 (GCA_000818775.1)</TD> | <TD>2015-1-15 (GCA_000818775.1)</TD> | ||
<TD>Glossina Genomes Consortium/Glossina_palpalis_gambiensis-2.0.1</TD> | <TD>Glossina Genomes Consortium/Glossina_palpalis_gambiensis-2.0.1</TD> | ||
| Line 467: | Line 522: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>16.827%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>16.827%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/755/GCA_000671755.1_Glossina_brevipalpis_1.0.3/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/671/755/GCA_000671755.1_Glossina_brevipalpis_1.0.3/ 72]</TH><TH>Glossina_brevipalpis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000671755.1/ Glossina brevipalpis]</TD><TD>Glossina_brevipalpis</TD> | ||
<TD>2014-5-8 (GCA_000671755.1)</TD> | <TD>2014-5-8 (GCA_000671755.1)</TD> | ||
<TD>Glossina Genomes Consortium/Glossina_brevipalpis_1.0.3</TD> | <TD>Glossina Genomes Consortium/Glossina_brevipalpis_1.0.3</TD> | ||
| Line 474: | Line 529: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>17.022%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>17.022%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/455/GCA_001017455.1_ASM101745v1/ 73]</TH><TH>Neobellieria_bullata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001017455.1/ Neobellieria bullata]</TD><TD>Neobellieria_bullata</TD> | ||
<TD> | <TD>2015-6-1 (GCA_001017455.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101745v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%37.56</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>11.431%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/275/GCA_001017275.1_ASM101727v1/ 74]</TH><TH>Calliphora_vicina</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001017275.1/ Calliphora vicina]</TD><TD>Calliphora_vicina</TD> | |||
<TD>2015-6-1 (GCA_001017275.1)</TD> | |||
<TD>UC Berkeley/ASM101727v1</TD> | |||
<TD ALIGN=RIGHT>%41.41</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>15.621%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/699/065/GCF_000699065.1_Lcup_2.0/ 75]</TH><TH>Lucilia_cuprina</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000699065.1/ Lucilia cuprina]</TD><TD>Lucilia_cuprina</TD> | |||
<TD>2017-12-15 (GCF_000699065.1)</TD> | |||
<TD>The i5k Initiative/Lcup_2.0</TD> | |||
<TD ALIGN=RIGHT>%50.16</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>20.785%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/835/GCA_001014835.1_ASM101483v1/ 76]</TH><TH>Lucilia_sericata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014835.1/ Lucilia sericata]</TD><TD>Lucilia_sericata</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014835.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101483v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%45.25</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>15.766%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/875/GCA_001014875.1_ASM101487v1/ 77]</TH><TH>Condylostylus_patibulatus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014875.1/ Condylostylus patibulatus]</TD><TD>Condylostylus_patibulatus</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014875.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101487v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%51.78</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>8.158%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/735/545/GCA_001735545.1_ASM173554v1/ 78]</TH><TH>Phormia_regina</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001735545.1/ Phormia regina]</TD><TD>Phormia_regina</TD> | ||
<TD> | <TD>2016-9-19 (GCA_001735545.1)</TD> | ||
<TD> | <TD>Indiana University-Purdue University Indianapolis (IUPUI)/ASM173554v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%56.85</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>20.199%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/195/GCA_001047195.1_ASM104719v1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/047/195/GCA_001047195.1_ASM104719v1/ 79]</TH><TH>Sarcophagidae_BV_2014</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001047195.1/ Sarcophagidae sp. BV-2014]</TD><TD>Sarcophagidae_BV_2014</TD> | ||
<TD>2015-7-6 (GCA_001047195.1)</TD> | <TD>2015-7-6 (GCA_001047195.1)</TD> | ||
<TD>UC Berkeley/ASM104719v1</TD> | <TD>UC Berkeley/ASM104719v1</TD> | ||
| Line 509: | Line 578: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>10.061%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.061%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/055/125/GCA_003055125.1_ASM305512v1/ 80]</TH><TH>Paykullia_maculata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003055125.1/ Paykullia maculata]</TD><TD>Paykullia_maculata</TD> | ||
<TD> | <TD>2018-4-17 (GCA_003055125.1)</TD> | ||
<TD> | <TD>VU University Amsterdam/ASM305512v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%54.05</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>19.655%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/237/135/GCA_002237135.1_Tel_dalmanni_2A_v1.0/ 81]</TH><TH>Teleopsis_dalmanni</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002237135.1/ Teleopsis dalmanni]</TD><TD>Teleopsis_dalmanni</TD> | ||
<TD> | <TD>2017-7-28 (GCA_002237135.1)</TD> | ||
<TD> | <TD>University of Maryland/Tel_dalmanni_2A_v1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%41.54</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>23.293%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/215/GCA_001015215.1_ASM101521v1/ 82]</TH><TH>Holcocephala_fusca</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015215.1/ Holcocephala fusca]</TD><TD>Holcocephala_fusca</TD> | ||
<TD>2015-5- | <TD>2015-5-29 (GCA_001015215.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101521v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%41.12</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.901%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/175/GCA_001015175.1_ASM101517v1/ 83]</TH><TH>Megaselia_abdita</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015175.1/ Megaselia abdita]</TD><TD>Megaselia_abdita</TD> | ||
<TD> | <TD>2015-5-29 (GCA_001015175.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101517v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%47.66</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>13.126%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/017/535/GCA_001017535.1_ASM101753v1/ 84]</TH><TH>Tipula_oleracea</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001017535.1/ Tipula oleracea]</TD><TD>Tipula_oleracea</TD> | ||
<TD>2015-6-1 ( | <TD>2015-6-1 (GCA_001017535.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101753v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%32.56</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>8.632%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/123/925/GCA_003123925.1_Hi_v1.0/ 85]</TH><TH>Haematobia_irritans</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003123925.1/ Haematobia irritans]</TD><TD>Haematobia_irritans</TD> | ||
<TD> | <TD>2018-5-14 (GCA_003123925.1)</TD> | ||
<TD> | <TD>USDA - Agricultural Research Service, USA/Hi_v1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%48.79</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>14.236%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/365/GCA_000371365.1_Musca_domestica-2.0.2/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/371/365/GCA_000371365.1_Musca_domestica-2.0.2/ 86]</TH><TH>musDom2</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000371365.1/ Musca<BR>domestica]</TD><TD>M. domestica</TD> | ||
<TD>22 Apr 2013 (Musca_domestica-2.0.2/musDom2)</TD> | <TD>22 Apr 2013 (Musca_domestica-2.0.2/musDom2)</TD> | ||
<TD>Glossina Genomes Consortium GCA_000371365.1</TD> | <TD>Glossina Genomes Consortium GCA_000371365.1</TD> | ||
| Line 558: | Line 627: | ||
<TD>2014-08-29</TD><TD ALIGN=RIGHT>19.278%</TD> | <TD>2014-08-29</TD><TD ALIGN=RIGHT>19.278%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/815/GCA_001014815.1_ASM101481v1/ 87]</TH><TH>Chaoborus_trivitattus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014815.1/ Chaoborus trivitattus]</TD><TD>Chaoborus_trivitattus</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014815.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101481v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%55.51</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>8.821%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/258/525/GCA_900258525.2_Cson_Genome_version_2.0/ 88]</TH><TH>Culicoides_sonorensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_900258525.2/ Culicoides sonorensis]</TD><TD>Culicoides_sonorensis</TD> | ||
<TD> | <TD>2018-2-26 (GCA_900258525.2)</TD> | ||
<TD> | <TD>European Bioinformatics Institute (EMBL-EBI)/Cson_Genome_version_2.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%47.09</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.882%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/845/GCA_001014845.1_ASM101484v1/ 89]</TH><TH>Mochlonyx_cinctipes</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014845.1/ Mochlonyx cinctipes]</TD><TD>Mochlonyx_cinctipes</TD> | ||
<TD>2015-5- | <TD>2015-5-28 (GCA_001014845.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101484v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%49.48</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>11. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.607%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/341/915/GCA_000341915.2_ASM34191v2/ 90]</TH><TH>Megaselia_scalaris</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000341915.2/ Megaselia scalaris]</TD><TD>Megaselia_scalaris</TD> | ||
<TD> | <TD>2013-3-26 (GCA_000341915.2)</TD> | ||
<TD> | <TD>EBI/ASM34191v2</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%42.05</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>8.143%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/204/515/GCF_002204515.2_AaegL5.0/ 91]</TH><TH>Aedes_aegypti</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_002204515.2/ Aedes aegypti]</TD><TD>Aedes_aegypti</TD> | ||
<TD> | <TD>2017-6-22 (GCF_002204515.2)</TD> | ||
<TD> | <TD>Aedes aegypti Genome Working Group (AGWG)/AaegL5.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%49.04</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>14.028%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/876/365/GCF_001876365.2_canu_80X_arrow2.2/ 92]</TH><TH>Aedes_albopictus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001876365.2/ Aedes albopictus]</TD><TD>Aedes_albopictus</TD> | ||
<TD> | <TD>2017-1-9 (GCF_001876365.2)</TD> | ||
<TD> | <TD>J. Craig Venter Institute/canu_80X_arrow2.2</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%56.63</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>15.172%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/895/GCA_001014895.1_ASM101489v1/ 93]</TH><TH>Hermetia_illucens</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014895.1/ Hermetia illucens]</TD><TD>Hermetia_illucens</TD> | ||
<TD> | <TD>2015-5-28 (GCA_001014895.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101489v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%24.43</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.575%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/687/245/GCF_001687245.1_Rhagoletis_zephyria_1.0/ 94]</TH><TH>Rhagoletis_zephyria</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_001687245.1/ Rhagoletis zephyria]</TD><TD>Rhagoletis_zephyria</TD> | ||
<TD> | <TD>2016-7-19 (GCF_001687245.1)</TD> | ||
<TD> | <TD>University of Illinois at Urbana-Champaign/Rhagoletis_zephyria_1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%45.05</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>21.196%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/209/185/GCF_000209185.1_CulPip1.0/ 95]</TH><TH>Culex_quinquefasciatus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000209185.1/ Culex quinquefasciatus]</TD><TD>Culex_quinquefasciatus</TD> | ||
<TD> | <TD>2007-4-23 (GCF_000209185.1)</TD> | ||
<TD> | <TD>Broad Institute/CulPip1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%53.31</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>13.421%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/305/GCA_000775305.1_ASM77530v1/ 96]</TH><TH>Belgica_antarctica</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000775305.1/ Belgica antarctica]</TD><TD>Belgica_antarctica</TD> | ||
<TD>2014- | <TD>2014-9-3 (GCA_000775305.1)</TD> | ||
<TD> | <TD>Stanford University/ASM77530v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%21.30</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.737%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/015/145/GCA_001015145.1_ASM101514v1/ 97]</TH><TH>Eristalis_dimidiata</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001015145.1/ Eristalis dimidiata]</TD><TD>Eristalis_dimidiata</TD> | ||
<TD> | <TD>2015-5-29 (GCA_001015145.1)</TD> | ||
<TD> | <TD>UC Berkeley/ASM101514v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%17.57</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>9.259%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/014/575/GCA_001014575.1_ASM101457v1/ 98]</TH><TH>Themira_minor</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_001014575.1/ Themira minor]</TD><TD>Themira_minor</TD> | ||
<TD>2015-5- | <TD>2015-5-28 (GCA_001014575.1)</TD> | ||
<TD>UC Berkeley/ | <TD>UC Berkeley/ASM101457v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%22.44</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>14.206%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/835/GCA_002091835.1_ASM209183v1/ 99]</TH><TH>A_maculatus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002091835.1/ Anopheles maculatus]</TD><TD>A_maculatus</TD> | ||
<TD> | <TD>2017-4-14 (GCA_002091835.1)</TD> | ||
<TD> | <TD>University of Malaya/ASM209183v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%19.04</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>13.114%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/205/GCA_000439205.1_Anili1/ 100]</TH><TH>A_nili</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000439205.1/ Anopheles nili]</TD><TD>A_nili</TD> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/439/205/GCA_000439205.1_Anili1/ | |||
<TD>2013-7-22 (GCA_000439205.1)</TD> | <TD>2013-7-22 (GCA_000439205.1)</TD> | ||
<TD>Virginia Tech/Anili1</TD> | <TD>Virginia Tech/Anili1</TD> | ||
| Line 684: | Line 725: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>9.202%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>9.202%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/375/GCA_000473375.1_Anop_culi_species_A-37_1_V1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/441/895/GCA_000441895.2_AS2/ 101]</TH><TH>A_sinensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000441895.2/ Anopheles sinensis]</TD><TD>A_sinensis</TD> | ||
<TD>2014-7-14 (GCA_000441895.2)</TD> | |||
<TD>Nanjing Medical University/AS2</TD> | |||
<TD ALIGN=RIGHT>%18.43</TD> | |||
<TD ALIGN=RIGHT>N/A</TD> | |||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12.718%</TD> | |||
</TR><TR> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/375/GCA_000473375.1_Anop_culi_species_A-37_1_V1/ 102]</TH><TH>A_culicifacies</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000473375.1/ Anopheles culicifacies]</TD><TD>A_culicifacies</TD> | |||
<TD>2013-9-30 (GCA_000473375.1)</TD> | <TD>2013-9-30 (GCA_000473375.1)</TD> | ||
<TD>Broad Institute/Anop_culi_species_A-37_1_V1</TD> | <TD>Broad Institute/Anop_culi_species_A-37_1_V1</TD> | ||
| Line 691: | Line 739: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>11.996%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.996%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/025/GCA_000349025.1_Anop_mini_MINIMUS1_V1/ 103]</TH><TH>A_minimus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349025.1/ Anopheles minimus]</TD><TD>A_minimus</TD> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/025/GCA_000349025.1_Anop_mini_MINIMUS1_V1/ | |||
<TD>2013-3-28 (GCA_000349025.1)</TD> | <TD>2013-3-28 (GCA_000349025.1)</TD> | ||
<TD>Broad Institute/Anop_mini_MINIMUS1_V1</TD> | <TD>Broad Institute/Anop_mini_MINIMUS1_V1</TD> | ||
| Line 705: | Line 746: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12.353%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.353%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/085/GCA_000349085.1_Anop_fune_FUMOZ_V1/ 104]</TH><TH>A_funestus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349085.1/ Anopheles funestus]</TD><TD>A_funestus</TD> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/085/GCA_000349085.1_Anop_fune_FUMOZ_V1/ | |||
<TD>2013-3-28 (GCA_000349085.1)</TD> | <TD>2013-3-28 (GCA_000349085.1)</TD> | ||
<TD>Broad Institute/Anop_fune_FUMOZ_V1</TD> | <TD>Broad Institute/Anop_fune_FUMOZ_V1</TD> | ||
| Line 733: | Line 753: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12.236%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.236%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/165/GCA_000349165.1_Anop_chri_ACHKN1017_V1/ 105]</TH><TH>A_christyi</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349165.1/ Anopheles christyi]</TD><TD>A_christyi</TD> | |||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/165/GCA_000349165.1_Anop_chri_ACHKN1017_V1/ | |||
<TD>2013-4-2 (GCA_000349165.1)</TD> | <TD>2013-4-2 (GCA_000349165.1)</TD> | ||
<TD>Broad Institute/Anop_chri_ACHKN1017_V1</TD> | <TD>Broad Institute/Anop_chri_ACHKN1017_V1</TD> | ||
| Line 754: | Line 760: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>11.794%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.794%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/185/GCA_000349185.1_Anop_arab_DONG5_A_V1/ 106]</TH><TH>A_arabiensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349185.1/ Anopheles arabiensis]</TD><TD>A_arabiensis</TD> | ||
<TD> | <TD>2013-4-2 (GCA_000349185.1)</TD> | ||
<TD> | <TD>Broad Institute/Anop_arab_DONG5_A_V1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%19.98</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.738%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/150/765/GCA_000150765.1_m5/ 107]</TH><TH>A_coluzzii</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000150765.1/ Anopheles coluzzii]</TD><TD>A_coluzzii</TD> | ||
<TD> | <TD>2008-4-21 (GCA_000150765.1)</TD> | ||
<TD> | <TD>Washington University Genome Sequencing Center/m5</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%20.43</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.160%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/065/GCA_000349065.1_Anop_quad_QUAD4_A_V1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/065/GCA_000349065.1_Anop_quad_QUAD4_A_V1/ 108]</TH><TH>A_quadriannulatus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349065.1/ Anopheles quadriannulatus]</TD><TD>A_quadriannulatus</TD> | ||
<TD>2013-3-28 (GCA_000349065.1)</TD> | <TD>2013-3-28 (GCA_000349065.1)</TD> | ||
<TD>Broad Institute/Anop_quad_QUAD4_A_V1</TD> | <TD>Broad Institute/Anop_quad_QUAD4_A_V1</TD> | ||
| Line 775: | Line 781: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12.514%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.514%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/845/GCA_000473845.2_Anop_meru_MAF_V1/ 109]</TH><TH>A_merus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000473845.2/ Anopheles merus]</TD><TD>A_merus</TD> | ||
<TD>2014-1-17 ( | <TD>2014-1-17 (GCA_000473845.2)</TD> | ||
<TD>Broad Institute/ | <TD>Broad Institute/Anop_meru_MAF_V1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%20.13</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.901%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/575/GCF_000005575.2_AgamP3/ 110]</TH><TH>anoGam3</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000005575.2/ Anopheles<BR>gambiae]</TD><TD>A. gambiae</TD> | ||
<TD> | <TD>Oct. 2006 (AgamP3/anoGam3)</TD> | ||
<TD> | <TD>The International Consortium for the Sequencing of Anopheles Genome</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2017-12-19</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>2017-12-19</TD> | ||
<TD> | <TD>2017-12-20</TD><TD ALIGN=RIGHT>13.776%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/575/GCF_000005575.2_AgamP3/ 111]</TH><TH>A_gambiae_1</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCF_000005575.2/ Anopheles gambiae str. PEST]</TD><TD>A_gambiae_1</TD> | ||
<TD> | <TD>2006-10-16 (GCF_000005575.2)</TD> | ||
<TD> | <TD>The International Consortium for the Sequencing of Anopheles Genome/AgamP3</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%21.75</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>13.328%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/525/GCA_000473525.2_Anop_mela_CM1001059_A_V2/ 112]</TH><TH>A_melas</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000473525.2/ Anopheles melas]</TD><TD>A_melas</TD> | ||
<TD>2014-1-17 ( | <TD>2014-1-17 (GCA_000473525.2)</TD> | ||
<TD>Broad Institute/ | <TD>Broad Institute/Anop_mela_CM1001059_A_V2</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%19.89</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.182%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/105/GCA_000349105.1_Anop_epir_epiroticus2_V1/ 113]</TH><TH>A_epiroticus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349105.1/ Anopheles epiroticus]</TD><TD>A_epiroticus</TD> | ||
<TD> | <TD>2013-3-28 (GCA_000349105.1)</TD> | ||
<TD> | <TD>Broad Institute/Anop_epir_epiroticus2_V1</TD> | ||
<TD ALIGN=RIGHT>%18. | <TD ALIGN=RIGHT>%18.82</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.650%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/091/845/GCA_002091845.1_ASM209184v1/ 114]</TH><TH>A_cracens</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002091845.1/ Anopheles cracens]</TD><TD>A_cracens</TD> | ||
<TD> | <TD>2017-4-14 (GCA_002091845.1)</TD> | ||
<TD> | <TD>University of Malaya/ASM209184v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%17.26</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.692%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/145/GCA_000349145.1_Anop_diru_WRAIR2_V1/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/145/GCA_000349145.1_Anop_diru_WRAIR2_V1/ 115]</TH><TH>A_dirus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349145.1/ Anopheles dirus]</TD><TD>A_dirus</TD> | ||
<TD>2013-3-28 (GCA_000349145.1)</TD> | <TD>2013-3-28 (GCA_000349145.1)</TD> | ||
<TD>Broad Institute/Anop_diru_WRAIR2_V1</TD> | <TD>Broad Institute/Anop_diru_WRAIR2_V1</TD> | ||
| Line 824: | Line 830: | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>12.779%</TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.779%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/448/975/GCA_003448975.1_ASM344897v1/ 116]</TH><TH>A_stephensi</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_003448975.1/ Anopheles stephensi]</TD><TD>A_stephensi</TD> | ||
<TD> | <TD>2018-9-13 (GCA_003448975.1)</TD> | ||
<TD> | <TD>Institute of Bioinformatics and Applied Biotechnology/ASM344897v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%17.59</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>11. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.913%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/445/GCA_000473445.2_Anop_fara_FAR1_V2/ 117]</TH><TH>A_farauti</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000473445.2/ Anopheles farauti]</TD><TD>A_farauti</TD> | ||
<TD>2014-1-17 (GCA_000473445.2)</TD> | |||
<TD>Broad Institute/Anop_fara_FAR1_V2</TD> | |||
<TD ALIGN=RIGHT>%18.58</TD> | |||
<TD> | |||
<TD> | |||
<TD ALIGN=RIGHT>% | |||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11- | <TD>2018-11-20</TD><TD ALIGN=RIGHT>12.374%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/275/GCA_000956275.1_ASM95627v1/ 118]</TH><TH>A_koliensis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000956275.1/ Anopheles koliensis]</TD><TD>A_koliensis</TD> | ||
<TD> | <TD>2015-3-19 (GCA_000956275.1)</TD> | ||
<TD> | <TD>Cleveland Clinic Foundation/ASM95627v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%18.49</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.841%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/215/GCA_000956215.1_ASM95621v1/ 119]</TH><TH>A_farauti_No4</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000956215.1/ Anopheles farauti No. 4]</TD><TD>A_farauti_No4</TD> | ||
<TD> | <TD>2015-3-19 (GCA_000956215.1)</TD> | ||
<TD> | <TD>Cleveland Clinic Foundation/ASM95621v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%18.16</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11- | <TD>2018-11-20</TD><TD ALIGN=RIGHT>11.042%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/956/255/GCA_000956255.1_ASM95625v1/ 120]</TH><TH>A_punctulatus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000956255.1/ Anopheles punctulatus]</TD><TD>A_punctulatus</TD> | ||
<TD> | <TD>2015-3-19 (GCA_000956255.1)</TD> | ||
<TD> | <TD>Cleveland Clinic Foundation/ASM95625v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%18.12</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT>10. | <TD>2018-11-19</TD><TD ALIGN=RIGHT>10.686%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/473/505/GCA_000473505.1_Anop_atro_EBRO_V1/ 121]</TH><TH>A_atroparvus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000473505.1/ Anopheles atroparvus]</TD><TD>A_atroparvus</TD> | ||
<TD> | <TD>2013-9-30 (GCA_000473505.1)</TD> | ||
<TD> | <TD>Broad Institute/Anop_atro_EBRO_V1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%15.90</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>12.705%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/211/455/GCA_000211455.3_A_darlingi_v1/ 122]</TH><TH>A_darlingi</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000211455.3/ Anopheles darlingi]</TD><TD>A_darlingi</TD> | ||
<TD> | <TD>2013-12-20 (GCA_000211455.3)</TD> | ||
<TD> | <TD>LNCC/A_darlingi_v1</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%16.78</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.465%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/846/955/GCA_002846955.1_A_aquasalis_v1.0/ 123]</TH><TH>A_aquasalis</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_002846955.1/ Anopheles aquasalis]</TD><TD>A_aquasalis</TD> | ||
<TD> | <TD>2017-12-21 (GCA_002846955.1)</TD> | ||
<TD> | <TD>Universidade Federal de Minas Gerais/A_aquasalis_v1.0</TD> | ||
<TD ALIGN=RIGHT>% | <TD ALIGN=RIGHT>%16.95</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD>2018-11-19</TD><TD ALIGN=RIGHT> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.625%</TD> | ||
</TR><TR> | </TR><TR> | ||
<TH>[ | <TH>[ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/349/125/GCA_000349125.2_Anop_albi_ALBI9_A_V2/ 124]</TH><TH>A_albimanus</TH><TD>[https://www.ncbi.nlm.nih.gov/assembly/GCA_000349125.2/ Anopheles albimanus]</TD><TD>A_albimanus</TD> | ||
<TD> | <TD>2017-8-1 (GCA_000349125.2)</TD> | ||
<TD> | <TD>Broad Institute/Anop_albi_ALBI9_A_V2</TD> | ||
<TD ALIGN=RIGHT> | <TD ALIGN=RIGHT>%15.54</TD> | ||
<TD ALIGN=RIGHT>N/A</TD> | <TD ALIGN=RIGHT>N/A</TD> | ||
<TD> | <TD>2018-11-19</TD><TD ALIGN=RIGHT>11.850%</TD> | ||
</TR> | </TR> | ||
</TABLE> | </TABLE> | ||
Latest revision as of 00:31, 5 January 2019
see also
- D. melanogaster 124-way Dm6 124-way Genome size statistics
- D. melanogaster 124-way Dm6 124-way conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| URL to assembly sequence |
UCSC db name/ genome-preview browser |
Scientific name/ assembly information |
Common name |
assembly date (version) | source version |
Repeat Masker |
Window Masker |
chain on dm6 |
% of dm6 matched (chainLink table) |
|---|---|---|---|---|---|---|---|---|---|
| 01 | dm6 | Drosophila melanogaster | D. melanogaster | Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6) | The FlyBase Consortium/Berkeley Drosophila Genome Project/Celera Genomics (GCA_000001215.4) | 2014-08-28 | 2014-08-28 | N/A | 98.737% |
| 02 | droSim2 | Drosophila simulans | D. simulans | Sep. 2014 (ASM75419v2/droSim2) | Princeton University | 2016-11-01 | 2016-11-01 | 2018-09-12 | 82.570% |
| 03 | droSec1 | Drosophila sechellia | D. sechellia | Oct. 2005 (Broad/droSec1) | Broad 28 Oct. 2005 | 2009-08-14 | N/A | 2014-08-29 | 82.561% |
| 04 | droEre2 | Drosophila erecta | D. erecta | Feb. 2006 (Agencourt CAF1/droEre2) | Agencourt CAF1 | 2009-09-02 | N/A | 2014-08-29 | 80.023% |
| 05 | droYak3 | Drosophila yakuba | D. yakuba | 27 Jun 2006 (dyak_caf1/droYak3) | FlyBase GCA_000005975.1 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 80.562% |
| 06 | droFic2 | Drosophila ficusphila | D. ficusphila | 04 Mar 2013 (Dfic_2.0/droFic2) | Baylor College of Medicine GCA_000220665.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 74.740% |
| 07 | droEug2 | Drosophila eugracilis | D. eugracilis | 04 Mar 2013 (Deug_2.0/droEug2) | The modENCODE Project GCA_000236325.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 75.265% |
| 08 | droBia2 | Drosophila biarmipes | D. biarmipes | 04 Mar 2013 (Dbia_2.0/droBia2) | Baylor College of Medicine GCA_000233415.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 75.042% |
| 09 | droSuz1 | Drosophila suzukii | D. suzukii | 30 Sep 2013 (Dsuzukii.v01/droSuz1) | BGI GCA_000472105.1 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 74.591% |
| 10 | droTak2 | Drosophila takahashii | D. takahashii | 04 Mar 2013 (Dtak_2.0/droTak2) | Baylor College of Medicine GCA_000224235.2 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 75.507% |
| 11 | droEle2 | Drosophila elegans | D. elegans | 04 Mar 2013 (Dele_2.0/droEle2) | Baylor College of Medicine GCA_000224195.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 75.445% |
| 12 | droRho2 | Drosophila rhopaloa | D. rhopaloa | 22 Feb 2013 (Drho_2.0/droRho2) | The modENCODE Project GCA_000236305.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 74.940% |
| 13 | D_serrata | Drosophila serrata | D_serrata | 2017-4-14 (GCF_002093755.1) | The University of Queensland/Dser1.0 | %35.57 | N/A | 2018-11-19 | 70.419% |
| 14 | droKik2 | Drosophila kikkawai | D. kikkawai | 04 Mar 2013 (Dkik_2.0/droKik2) | Baylor College of Medicine GCA_000224215.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 70.590% |
| 15 | droAna3 | Drosophila ananassae | D. ananassae | Feb. 2006 (Agencourt CAF1/droAna3) | Agencourt CAF1 | 2009-09-02 | 2009-09-02 | 2014-08-29 | 67.282% |
| 16 | droBip2 | Drosophila bipectinata | D. bipectinata | 04 Mar 2013 (Dbip_2.0/droBip2) | Baylor College of Medicine GCA_000236285.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 65.865% |
| 17 | D_americana | Drosophila americana | D_americana | 2015-10-2 (GCA_001245395.1) | IBMC/D._americana_H5_strain_genome_assembly | %27.87 | N/A | 2018-11-19 | 45.382% |
| 18 | D_novamexicana | Drosophila novamexicana | D_novamexicana | 2018-7-2 (GCA_003285875.1) | the University of Chicago/DnovRS1 | %32.08 | N/A | 2018-11-19 | 48.568% |
| 19 | droVir3 | Drosophila virilis | D. virilis | Feb. 2006 (Agencourt CAF1/droVir3) | Agencourt CAF1 | 2009-09-02 | N/A | 2014-08-29 | 51.937% |
| 20 | D_montana | Drosophila montana | D_montana | 2018-5-2 (GCA_003086615.1) | University of St. Andrews/ASM308661v1 | %27.35 | N/A | 2018-11-19 | 45.270% |
| 21 | D_arizonae | Drosophila arizonae | D_arizonae | 2016-5-9 (GCF_001654025.1) | Biotechnology Institute of UNAM/ASM165402v1 | %30.82 | N/A | 2018-11-19 | 41.792% |
| 22 | droMoj3 | Drosophila mojavensis | D. mojavensis | Feb. 2006 (Agencourt CAF1/droMoj3) | Agencourt CAF1 | 2009-09-02 | N/A | 2014-08-29 | 50.132% |
| 23 | D_navojoa | Drosophila navojoa | D_navojoa | 2016-5-9 (GCF_001654015.1) | Biotechnology Institute of UNAM/ASM165401v1 | %30.77 | N/A | 2018-11-19 | 36.286% |
| 24 | D_hydei | Drosophila hydei | D_hydei | 2017-11-16 (GCF_002780465.1) | University of California Davis/ASM278046v1 | %28.99 | N/A | 2018-11-19 | 45.605% |
| 25 | D_busckii | Drosophila busckii | D_busckii | 2015-9-2 (GCF_001277935.1) | University of California, Berkeley/ASM127793v1 | %33.85 | N/A | 2018-11-19 | 42.220% |
| 26 | droGri2 | Drosophila grimshawi | D. grimshawi | Feb. 2006 (Agencourt CAF1/droGri2) | Agencourt CAF1 | 2009-09-02 | N/A | 2014-08-29 | 50.979% |
| 27 | D_athabasca | Drosophila athabasca | D_athabasca | 2018-6-8 (GCA_003185025.1) | UC Berkeley/ASM318502v1 | %25.05 | N/A | 2018-11-19 | 54.625% |
| 28 | D_pseudoobscura_1 | Drosophila pseudoobscura pseudoobscura | D_pseudoobscura_1 | 2013-4-11 (GCF_000001765.3) | Baylor College of Medicine/Dpse_3.0 | %23.67 | N/A | 2018-11-19 | 59.426% |
| 29 | droMir2 | Drosophila miranda | D. miranda | 19 Apr 2013 (DroMir_2.2/droMir2) | University of California, Berkeley GCA_000269505.2 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 59.308% |
| 30 | droPer1 | Drosophila persimilis | D. persimilis | Oct. 2005 (Broad/droPer1) | Broad 28 Oct. 2005 | 2009-08-15 | N/A | 2014-08-29 | 59.049% |
| 31 | droPse3 | Drosophila pseudoobscura pseudoobscura | D. pseudoobscura | 11 Apr 2013 (Dpse_3.0/droPse3) | Baylor College of Medicine GCA_000001765.2 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 59.836% |
| 32 | D_subobscura | Drosophila subobscura | D_subobscura | 2017-11-3 (GCA_002749795.1) | Faculdade de Ciencias, Universidade de Lisboa/Dsub_1.0 | %22.71 | N/A | 2018-11-19 | 55.249% |
| 33 | D_obscura | Drosophila obscura | D_obscura | 2017-7-1 (GCF_002217835.1) | Laboratory for DNA Data Anaysis, Center for Information Biology, National Institute of Genetics/Dobs_1.0 | %25.96 | N/A | 2018-11-19 | 61.561% |
| 34 | Zaprionus_indianus | Zaprionus indianus | Zaprionus_indianus | 2016-10-4 (GCA_001752445.1) | not applicable/ZP_IN_1.0 | %25.45 | N/A | 2018-11-19 | 36.928% |
| 35 | D_nasuta | Drosophila nasuta | D_nasuta | 2017-7-20 (GCA_002222885.1) | Jaypee Institute of Information Technology/ASM222288v1 | %30.04 | N/A | 2018-11-19 | 39.549% |
| 36 | droAlb1 | Drosophila albomicans | D. albomicans | 21 May 2012 (DroAlb_1.0/droAlb1) | Kunming Institute of Zoology, Chinese Academy of Sciences GCA_000298335.1 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 44.544% |
| 37 | Scaptodrosophila_lebanonensis | Scaptodrosophila lebanonensis | Scaptodrosophila_lebanonensis | 2018-7-2 (GCA_003285725.1) | the University of Chicago/SlebRS1 | %32.14 | N/A | 2018-11-19 | 42.552% |
| 38 | Phortica_variegata | Phortica variegata | Phortica_variegata | 2015-5-28 (GCA_001014415.1) | UC Berkeley/ASM101441v1 | %34.86 | N/A | 2018-11-19 | 24.774% |
| 39 | droWil2 | Drosophila willistoni | D. willistoni | 03 Aug 2006 (dwil_caf1/droWil2) | J. Craig Venter Institute GCA_000005925.1 | 2014-06-17 | 2014-06-17 | 2014-08-29 | 51.432% |
| 40 | Liriomyza_trifolii | Liriomyza trifolii | Liriomyza_trifolii | 2015-5-29 (GCA_001014935.1) | UC Berkeley/ASM101493v1 | %36.26 | N/A | 2018-11-19 | 9.358% |
| 41 | Eutreta_diana | Eutreta diana | Eutreta_diana | 2015-5-29 (GCA_001015115.1) | UC Berkeley/ASM101511v1 | %25.67 | N/A | 2018-11-19 | 11.427% |
| 42 | Trupanea_jonesi | Trupanea jonesi | Trupanea_jonesi | 2015-5-28 (GCA_001014665.1) | UC Berkeley/ASM101466v1 | %26.44 | N/A | 2018-11-19 | 7.450% |
| 43 | Tephritis_californica | Tephritis californica | Tephritis_californica | 2015-6-1 (GCA_001017515.1) | UC Berkeley/ASM101751v1 | %30.68 | N/A | 2018-11-19 | 12.995% |
| 44 | Stomoxys_calcitrans | Stomoxys calcitrans | Stomoxys_calcitrans | 2015-5-31 (GCF_001015335.1) | Glossina Genomes Consortium/Stomoxys_calcitrans-1.0.1 | %56.94 | N/A | 2018-11-19 | 18.152% |
| 45 | Trichoceridae_BV_2014 | Trichoceridae sp. BV-2014 | Trichoceridae_BV_2014 | 2015-5-28 (GCA_001014425.1) | UC Berkeley/ASM101442v1 | %37.74 | N/A | 2018-11-19 | 3.974% |
| 46 | Proctacanthus_coquilletti | Proctacanthus coquilletti | Proctacanthus_coquilletti | 2017-1-4 (GCA_001932985.1) | Smithsonian Institution, National Museum of Natural History/200kmer_750.trimmed | %35.51 | N/A | 2018-11-19 | 14.594% |
| 47 | triCas2 | Tribolium castaneum | T. castaneum | Sep. 2005 (Baylor 2.0/triCas2) | Baylor | 2009-09-02 | N/A | 2014-08-29 | 14.092% |
| 48 | Chironomus_riparius | Chironomus riparius | Chironomus_riparius | 2015-5-28 (GCA_001014505.1) | UC Berkeley/ASM101450v1 | %34.64 | N/A | 2018-11-19 | 9.683% |
| 49 | Chironomus_tentans | Chironomus tentans | Chironomus_tentans | 2014-11-7 (GCA_000786525.1) | SciLifeLab/CT01 | %38.84 | N/A | 2018-11-19 | 9.943% |
| 50 | Clunio_marinus | Clunio marinus | Clunio_marinus | 2016-11-28 (GCA_900005825.1) | MAX F. PERUTZ LABORATORIES/CLUMA_1.0 | %30.83 | N/A | 2018-11-19 | 10.684% |
| 51 | Lutzomyia_longipalpis | Lutzomyia longipalpis | Lutzomyia_longipalpis | 2012-6-11 (GCA_000265325.1) | Baylor College of Medicine/Llon_1.0 | %36.09 | N/A | 2018-11-19 | 10.883% |
| 52 | Phlebotomus_papatasi | Phlebotomus papatasi | Phlebotomus_papatasi | 2012-5-16 (GCA_000262795.1) | Washington University Genome Sequencing Center/Ppap_1.0 | %45.25 | N/A | 2018-11-19 | 12.066% |
| 53 | Coboldia_fuscipes | Coboldia fuscipes | Coboldia_fuscipes | 2015-5-28 (GCA_001014335.1) | UC Berkeley/ASM101433v1 | %34.13 | N/A | 2018-11-19 | 11.908% |
| 54 | Mayetiola_destructor | Mayetiola destructor | Mayetiola_destructor | 2010-10-18 (GCA_000149185.1) | Baylor College of Medicine/Mdes_1.0 | %36.15 | N/A | 2018-11-19 | 10.512% |
| 55 | Clogmia_albipunctata | Clogmia albipunctata | Clogmia_albipunctata | 2015-5-29 (GCA_001014945.1) | UC Berkeley/ASM101494v1 | %43.24 | N/A | 2018-11-19 | 12.098% |
| [ 56] | apiMel4 | Apis mellifera | A. mellifera | 04 Nov 2010 (Amel_4.5/apiMel4) | Baylor College of Medicine | 2013-12-02 | 2013-12-02 | 2014-08-29 | 8.183% |
| 57 | Bactrocera_dorsalis | Bactrocera dorsalis | Bactrocera_dorsalis | 2014-12-3 (GCF_000789215.1) | USDA-ARS/ASM78921v2 | %32.02 | N/A | 2018-11-19 | 19.222% |
| 58 | Bactrocera_latifrons | Bactrocera latifrons | Bactrocera_latifrons | 2016-10-25 (GCF_001853355.1) | USDA-ARS/ASM185335v1 | %35.57 | N/A | 2018-11-19 | 20.469% |
| 59 | Bactrocera_tryoni | Bactrocera tryoni | Bactrocera_tryoni | 2014-5-21 (GCA_000695345.1) | Queensland Fruit Fly Consortium/Assembly_2.2_of_Bactrocera_tryoni_genome | %37.41 | N/A | 2018-11-19 | 19.523% |
| 60 | Bactrocera_oleae | Bactrocera oleae | Bactrocera_oleae | 2015-7-29 (GCF_001188975.1) | McGill University/gapfilled_joined_lt9474.gt500.covgt10 | %37.62 | N/A | 2018-11-19 | 20.400% |
| 61 | Zeugodacus_cucurbitae | Zeugodacus cucurbitae | Zeugodacus_cucurbitae | 2014-12-23 (GCF_000806345.1) | USDA ARS/ASM80634v1 | %36.97 | N/A | 2018-11-19 | 20.252% |
| 62 | Ceratitis_capitata | Ceratitis capitata | Ceratitis_capitata | 2017-11-6 (GCF_000347755.3) | The i5k Initiative/Ccap_2.1 | %39.93 | N/A | 2018-11-19 | 19.997% |
| 63 | Cirrula_hians | Cirrula hians | Cirrula_hians | 2015-5-29 (GCA_001015075.1) | UC Berkeley/ASM101507v1 | %37.21 | N/A | 2018-11-19 | 12.751% |
| 64 | Ephydra_gracilis | Ephydra gracilis | Ephydra_gracilis | 2015-5-28 (GCA_001014675.1) | UC Berkeley/ASM101467v1 | %34.53 | N/A | 2018-11-19 | 16.643% |
| 65 | Sphyracephala_brevicornis | Sphyracephala brevicornis | Sphyracephala_brevicornis | 2015-5-29 (GCA_001015235.1) | UC Berkeley/ASM101523v1 | %39.65 | N/A | 2018-11-19 | 14.969% |
| 66 | Glossina_austeni | Glossina austeni | Glossina_austeni | 2014-5-12 (GCA_000688735.1) | Glossina Genomes Consortium/Glossina_austeni-1.0.3 | %34.37 | N/A | 2018-11-19 | 16.948% |
| 67 | Glossina_morsitans_1 | Glossina morsitans | Glossina_morsitans_1 | 2015-5-28 (GCA_001014515.1) | UC Berkeley/ASM101451v1 | %32.41 | N/A | 2018-11-19 | 15.733% |
| 68 | Glossina_morsitans_2 | Glossina morsitans morsitans | Glossina_morsitans_2 | 2014-3-12 (GCA_001077435.1) | Wellcome Trust Sanger Institute/ASM107743v1 | %33.60 | N/A | 2018-11-19 | 16.954% |
| 69 | Glossina_pallidipes | Glossina pallidipes | Glossina_pallidipes | 2014-5-12 (GCA_000688715.1) | Glossina Genomes Consortium/Glossina_pallidipes-1.0.3 | %33.37 | N/A | 2018-11-19 | 17.101% |
| 70 | Glossina_fuscipes | Glossina fuscipes fuscipes | Glossina_fuscipes | 2014-5-8 (GCA_000671735.1) | Glossina Genomes Consortium/Glossina_fuscipes-3.0.2 | %34.16 | N/A | 2018-11-19 | 17.078% |
| 71 | Glossina_palpalis_gambiensis | Glossina palpalis gambiensis | Glossina_palpalis_gambiensis | 2015-1-15 (GCA_000818775.1) | Glossina Genomes Consortium/Glossina_palpalis_gambiensis-2.0.1 | %33.31 | N/A | 2018-11-19 | 16.827% |
| 72 | Glossina_brevipalpis | Glossina brevipalpis | Glossina_brevipalpis | 2014-5-8 (GCA_000671755.1) | Glossina Genomes Consortium/Glossina_brevipalpis_1.0.3 | %39.57 | N/A | 2018-11-19 | 17.022% |
| 73 | Neobellieria_bullata | Neobellieria bullata | Neobellieria_bullata | 2015-6-1 (GCA_001017455.1) | UC Berkeley/ASM101745v1 | %37.56 | N/A | 2018-11-19 | 11.431% |
| 74 | Calliphora_vicina | Calliphora vicina | Calliphora_vicina | 2015-6-1 (GCA_001017275.1) | UC Berkeley/ASM101727v1 | %41.41 | N/A | 2018-11-19 | 15.621% |
| 75 | Lucilia_cuprina | Lucilia cuprina | Lucilia_cuprina | 2017-12-15 (GCF_000699065.1) | The i5k Initiative/Lcup_2.0 | %50.16 | N/A | 2018-11-19 | 20.785% |
| 76 | Lucilia_sericata | Lucilia sericata | Lucilia_sericata | 2015-5-28 (GCA_001014835.1) | UC Berkeley/ASM101483v1 | %45.25 | N/A | 2018-11-19 | 15.766% |
| 77 | Condylostylus_patibulatus | Condylostylus patibulatus | Condylostylus_patibulatus | 2015-5-28 (GCA_001014875.1) | UC Berkeley/ASM101487v1 | %51.78 | N/A | 2018-11-19 | 8.158% |
| 78 | Phormia_regina | Phormia regina | Phormia_regina | 2016-9-19 (GCA_001735545.1) | Indiana University-Purdue University Indianapolis (IUPUI)/ASM173554v1 | %56.85 | N/A | 2018-11-19 | 20.199% |
| 79 | Sarcophagidae_BV_2014 | Sarcophagidae sp. BV-2014 | Sarcophagidae_BV_2014 | 2015-7-6 (GCA_001047195.1) | UC Berkeley/ASM104719v1 | %45.93 | N/A | 2018-11-19 | 10.061% |
| 80 | Paykullia_maculata | Paykullia maculata | Paykullia_maculata | 2018-4-17 (GCA_003055125.1) | VU University Amsterdam/ASM305512v1 | %54.05 | N/A | 2018-11-19 | 19.655% |
| 81 | Teleopsis_dalmanni | Teleopsis dalmanni | Teleopsis_dalmanni | 2017-7-28 (GCA_002237135.1) | University of Maryland/Tel_dalmanni_2A_v1.0 | %41.54 | N/A | 2018-11-19 | 23.293% |
| 82 | Holcocephala_fusca | Holcocephala fusca | Holcocephala_fusca | 2015-5-29 (GCA_001015215.1) | UC Berkeley/ASM101521v1 | %41.12 | N/A | 2018-11-19 | 10.901% |
| 83 | Megaselia_abdita | Megaselia abdita | Megaselia_abdita | 2015-5-29 (GCA_001015175.1) | UC Berkeley/ASM101517v1 | %47.66 | N/A | 2018-11-19 | 13.126% |
| 84 | Tipula_oleracea | Tipula oleracea | Tipula_oleracea | 2015-6-1 (GCA_001017535.1) | UC Berkeley/ASM101753v1 | %32.56 | N/A | 2018-11-19 | 8.632% |
| 85 | Haematobia_irritans | Haematobia irritans | Haematobia_irritans | 2018-5-14 (GCA_003123925.1) | USDA - Agricultural Research Service, USA/Hi_v1.0 | %48.79 | N/A | 2018-11-19 | 14.236% |
| 86 | musDom2 | Musca domestica | M. domestica | 22 Apr 2013 (Musca_domestica-2.0.2/musDom2) | Glossina Genomes Consortium GCA_000371365.1 | 2014-06-18 | 2014-06-18 | 2014-08-29 | 19.278% |
| 87 | Chaoborus_trivitattus | Chaoborus trivitattus | Chaoborus_trivitattus | 2015-5-28 (GCA_001014815.1) | UC Berkeley/ASM101481v1 | %55.51 | N/A | 2018-11-19 | 8.821% |
| 88 | Culicoides_sonorensis | Culicoides sonorensis | Culicoides_sonorensis | 2018-2-26 (GCA_900258525.2) | European Bioinformatics Institute (EMBL-EBI)/Cson_Genome_version_2.0 | %47.09 | N/A | 2018-11-19 | 11.882% |
| 89 | Mochlonyx_cinctipes | Mochlonyx cinctipes | Mochlonyx_cinctipes | 2015-5-28 (GCA_001014845.1) | UC Berkeley/ASM101484v1 | %49.48 | N/A | 2018-11-19 | 11.607% |
| 90 | Megaselia_scalaris | Megaselia scalaris | Megaselia_scalaris | 2013-3-26 (GCA_000341915.2) | EBI/ASM34191v2 | %42.05 | N/A | 2018-11-19 | 8.143% |
| 91 | Aedes_aegypti | Aedes aegypti | Aedes_aegypti | 2017-6-22 (GCF_002204515.2) | Aedes aegypti Genome Working Group (AGWG)/AaegL5.0 | %49.04 | N/A | 2018-11-19 | 14.028% |
| 92 | Aedes_albopictus | Aedes albopictus | Aedes_albopictus | 2017-1-9 (GCF_001876365.2) | J. Craig Venter Institute/canu_80X_arrow2.2 | %56.63 | N/A | 2018-11-19 | 15.172% |
| 93 | Hermetia_illucens | Hermetia illucens | Hermetia_illucens | 2015-5-28 (GCA_001014895.1) | UC Berkeley/ASM101489v1 | %24.43 | N/A | 2018-11-19 | 11.575% |
| 94 | Rhagoletis_zephyria | Rhagoletis zephyria | Rhagoletis_zephyria | 2016-7-19 (GCF_001687245.1) | University of Illinois at Urbana-Champaign/Rhagoletis_zephyria_1.0 | %45.05 | N/A | 2018-11-19 | 21.196% |
| 95 | Culex_quinquefasciatus | Culex quinquefasciatus | Culex_quinquefasciatus | 2007-4-23 (GCF_000209185.1) | Broad Institute/CulPip1.0 | %53.31 | N/A | 2018-11-19 | 13.421% |
| 96 | Belgica_antarctica | Belgica antarctica | Belgica_antarctica | 2014-9-3 (GCA_000775305.1) | Stanford University/ASM77530v1 | %21.30 | N/A | 2018-11-19 | 10.737% |
| 97 | Eristalis_dimidiata | Eristalis dimidiata | Eristalis_dimidiata | 2015-5-29 (GCA_001015145.1) | UC Berkeley/ASM101514v1 | %17.57 | N/A | 2018-11-19 | 9.259% |
| 98 | Themira_minor | Themira minor | Themira_minor | 2015-5-28 (GCA_001014575.1) | UC Berkeley/ASM101457v1 | %22.44 | N/A | 2018-11-19 | 14.206% |
| 99 | A_maculatus | Anopheles maculatus | A_maculatus | 2017-4-14 (GCA_002091835.1) | University of Malaya/ASM209183v1 | %19.04 | N/A | 2018-11-19 | 13.114% |
| 100 | A_nili | Anopheles nili | A_nili | 2013-7-22 (GCA_000439205.1) | Virginia Tech/Anili1 | %13.72 | N/A | 2018-11-19 | 9.202% |
| 101 | A_sinensis | Anopheles sinensis | A_sinensis | 2014-7-14 (GCA_000441895.2) | Nanjing Medical University/AS2 | %18.43 | N/A | 2018-11-19 | 12.718% |
| 102 | A_culicifacies | Anopheles culicifacies | A_culicifacies | 2013-9-30 (GCA_000473375.1) | Broad Institute/Anop_culi_species_A-37_1_V1 | %18.38 | N/A | 2018-11-19 | 11.996% |
| 103 | A_minimus | Anopheles minimus | A_minimus | 2013-3-28 (GCA_000349025.1) | Broad Institute/Anop_mini_MINIMUS1_V1 | %18.24 | N/A | 2018-11-19 | 12.353% |
| 104 | A_funestus | Anopheles funestus | A_funestus | 2013-3-28 (GCA_000349085.1) | Broad Institute/Anop_fune_FUMOZ_V1 | %20.93 | N/A | 2018-11-19 | 12.236% |
| 105 | A_christyi | Anopheles christyi | A_christyi | 2013-4-2 (GCA_000349165.1) | Broad Institute/Anop_chri_ACHKN1017_V1 | %19.17 | N/A | 2018-11-19 | 11.794% |
| 106 | A_arabiensis | Anopheles arabiensis | A_arabiensis | 2013-4-2 (GCA_000349185.1) | Broad Institute/Anop_arab_DONG5_A_V1 | %19.98 | N/A | 2018-11-19 | 12.738% |
| 107 | A_coluzzii | Anopheles coluzzii | A_coluzzii | 2008-4-21 (GCA_000150765.1) | Washington University Genome Sequencing Center/m5 | %20.43 | N/A | 2018-11-19 | 12.160% |
| 108 | A_quadriannulatus | Anopheles quadriannulatus | A_quadriannulatus | 2013-3-28 (GCA_000349065.1) | Broad Institute/Anop_quad_QUAD4_A_V1 | %20.09 | N/A | 2018-11-19 | 12.514% |
| 109 | A_merus | Anopheles merus | A_merus | 2014-1-17 (GCA_000473845.2) | Broad Institute/Anop_meru_MAF_V1 | %20.13 | N/A | 2018-11-19 | 12.901% |
| 110 | anoGam3 | Anopheles gambiae | A. gambiae | Oct. 2006 (AgamP3/anoGam3) | The International Consortium for the Sequencing of Anopheles Genome | 2017-12-19 | 2017-12-19 | 2017-12-20 | 13.776% |
| 111 | A_gambiae_1 | Anopheles gambiae str. PEST | A_gambiae_1 | 2006-10-16 (GCF_000005575.2) | The International Consortium for the Sequencing of Anopheles Genome/AgamP3 | %21.75 | N/A | 2018-11-19 | 13.328% |
| 112 | A_melas | Anopheles melas | A_melas | 2014-1-17 (GCA_000473525.2) | Broad Institute/Anop_mela_CM1001059_A_V2 | %19.89 | N/A | 2018-11-19 | 12.182% |
| 113 | A_epiroticus | Anopheles epiroticus | A_epiroticus | 2013-3-28 (GCA_000349105.1) | Broad Institute/Anop_epir_epiroticus2_V1 | %18.82 | N/A | 2018-11-19 | 12.650% |
| 114 | A_cracens | Anopheles cracens | A_cracens | 2017-4-14 (GCA_002091845.1) | University of Malaya/ASM209184v1 | %17.26 | N/A | 2018-11-19 | 11.692% |
| 115 | A_dirus | Anopheles dirus | A_dirus | 2013-3-28 (GCA_000349145.1) | Broad Institute/Anop_diru_WRAIR2_V1 | %17.15 | N/A | 2018-11-19 | 12.779% |
| 116 | A_stephensi | Anopheles stephensi | A_stephensi | 2018-9-13 (GCA_003448975.1) | Institute of Bioinformatics and Applied Biotechnology/ASM344897v1 | %17.59 | N/A | 2018-11-19 | 11.913% |
| 117 | A_farauti | Anopheles farauti | A_farauti | 2014-1-17 (GCA_000473445.2) | Broad Institute/Anop_fara_FAR1_V2 | %18.58 | N/A | 2018-11-20 | 12.374% |
| 118 | A_koliensis | Anopheles koliensis | A_koliensis | 2015-3-19 (GCA_000956275.1) | Cleveland Clinic Foundation/ASM95627v1 | %18.49 | N/A | 2018-11-19 | 10.841% |
| 119 | A_farauti_No4 | Anopheles farauti No. 4 | A_farauti_No4 | 2015-3-19 (GCA_000956215.1) | Cleveland Clinic Foundation/ASM95621v1 | %18.16 | N/A | 2018-11-20 | 11.042% |
| 120 | A_punctulatus | Anopheles punctulatus | A_punctulatus | 2015-3-19 (GCA_000956255.1) | Cleveland Clinic Foundation/ASM95625v1 | %18.12 | N/A | 2018-11-19 | 10.686% |
| 121 | A_atroparvus | Anopheles atroparvus | A_atroparvus | 2013-9-30 (GCA_000473505.1) | Broad Institute/Anop_atro_EBRO_V1 | %15.90 | N/A | 2018-11-19 | 12.705% |
| 122 | A_darlingi | Anopheles darlingi | A_darlingi | 2013-12-20 (GCA_000211455.3) | LNCC/A_darlingi_v1 | %16.78 | N/A | 2018-11-19 | 11.465% |
| 123 | A_aquasalis | Anopheles aquasalis | A_aquasalis | 2017-12-21 (GCA_002846955.1) | Universidade Federal de Minas Gerais/A_aquasalis_v1.0 | %16.95 | N/A | 2018-11-19 | 11.625% |
| 124 | A_albimanus | Anopheles albimanus | A_albimanus | 2017-8-1 (GCA_000349125.2) | Broad Institute/Anop_albi_ALBI9_A_V2 | %15.54 | N/A | 2018-11-19 | 11.850% |
