GapOverlap: Difference between revisions

Revision as of 05:46, 20 April 2017

methods

The measurements are taken from the gapOverlap.bed[.gz] file in /hive/data/genomes/<db>/bed/gapOverlap/gapOverlap.bed[.gz] The score column in the bed file (column 5) is the size of the duplicated sequence. The gap size between the duplicated sequence is calculated from: end - start + 2 * score

The size of the duplicated sequence is between 30 bases and 1000 bases, we are not checking for sizes outside that range.

The item total is the sum of the sizes of the duplicated sequences. Not both sides though, just one side. This indicates how much sequence is duplicated. Multiply this by 2 to see total amount of sequence involved in these repeats for both sides.

The gap total is the sum of the sizes of all the gaps involved.

table features

The table columns can be sorted, click on the up/down arrow icon in the column header. The 'year' is what we have in the dbDb table as indicated from the assembly information files for the date of the assembly. A few do not have dates (set to 1880), and do not have database genome browsers The example item is a worst case example, where the ratio of dup sequence size to gap size is the highest, i.e. smallest gap with largest dup size

These ends were found by taking 1,000 bases on each side of any run of N's in the sequence, thus any gap, and aligned with the blat command:

 blat -q=dna -minIdentity=95 -repMatch=10 upstream.fa downstream.fa

Filtering the PSL output for a perfect match, no mis-matches, and therefore of equal size matching sequence, where the alignment ends exactly at the end of the upstream sequence before the gap and begins exactly at the start of the downstream sequence after the gap.

gapOverlap table statistics

count	year	dbName	ncbiAsmId	assembly method	item count	item median	item total	gap median	gap total	example item dup size, gap size, link	scatter plot dup size vs. gap size
001	2016	GCA_001624835.1_WSB_EiJ_v1	GCA_001624835.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	11455	236	3524308	25	10785288	994, 1, chrX:58921651-58923639	plot GCA_001624835.1_WSB_EiJ_v1
002	2016	GCA_001624215.1_A_J_v1	GCA_001624215.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	38843	80	6428892	25	14025482	1000, 1, chr17:63064911-63066911	plot GCA_001624215.1_A_J_v1
003	2016	GCA_001624475.1_CBA_J_v1	GCA_001624475.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	24180	279.5	7933814	26	26736971	999, 1, chr16:100093490-100095488	plot GCA_001624475.1_CBA_J_v1
004	2016	GCA_900094665.1_CAROLI_EIJ_v1	GCA_900094665.1	tbd	6469	70	484857	1	599072	945, 1, chr1:145228793-145230683	plot GCA_900094665.1_CAROLI_EIJ_v1
005	2016	GCA_001632615.1_LP_J_v1	GCA_001632615.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	18175	98	5185817	25	13674278	997, 1, chr12:42758762-42760756	plot GCA_001632615.1_LP_J_v1
006	2016	GCA_001632525.1_BALB_cJ_v1	GCA_001632525.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	15793	363	5543975	25	10053337	999, 1, chr4:59636957-59638955	plot GCA_001632525.1_BALB_cJ_v1
007	2016	GCA_900095145.1_PAHARI_EIJ_v1	GCA_900095145.1	tbd	6365	69	479534	1	675789	1000, 1, chr7:107557946-107559946	plot GCA_900095145.1_PAHARI_EIJ_v1
008	2016	GCA_001624775.1_PWK_PhJ_v1	GCA_001624775.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	246352	65	16823451	25	10585326	1000, 11, chrX:47500642-47502652	plot GCA_001624775.1_PWK_PhJ_v1
009	2016	GCA_001624505.1_DBA_2J_v1	GCA_001624505.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	13245	98	3606947	25	7251641	999, 1, chr10:47277903-47279901	plot GCA_001624505.1_DBA_2J_v1
010	2016	GCA_001624675.1_NOD_ShiLtJ_v1	GCA_001624675.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	36838	172	10515906	26	25076950	1000, 1, chr15:69777938-69779938	plot GCA_001624675.1_NOD_ShiLtJ_v1
011	2016	GCA_001624865.1_SPRET_EiJ_v1	GCA_001624865.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail genomics v. August-2015; Ragout v. 2.0b	17567	516	8157541	100	12022683	1000, 1, chr10:66049175-66051175	plot GCA_001624865.1_SPRET_EiJ_v1
012	2016	GCA_001624745.1_NZO_HlLtJ_v1	GCA_001624745.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	21209	448	8647582	25	14665906	1000, 1, chr10:29328015-29330015	plot GCA_001624745.1_NZO_HlLtJ_v1
013	2016	GCA_001624185.1_129S1_SvImJ_v1	GCA_001624185.1	SGA v. 0.9.19; Ragout v. 2.0b	20479	400	7813478	25	15456883	1000, 1, chr15:34994444-34996444	plot GCA_001624185.1_129S1_SvImJ_v1
014	2016	GCA_001632555.1_C57BL_6NJ_v1	GCA_001632555.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	24698	97	6239791	25	14404336	992, 1, chr10:109927459-109929443	plot GCA_001632555.1_C57BL_6NJ_v1
015	2016	GCA_001624295.1_AKR_J_v1	GCA_001624295.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	18106	335	6717178	25	14468858	1000, 1, chr16:53464467-53466467	plot GCA_001624295.1_AKR_J_v1
016	2016	GCA_001624445.1_CAST_EiJ_v1	GCA_001624445.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail Genomics v. August-2015; Ragout v. 2.0b	14714	324	5063290	100	10013826	1000, 1, chr12:100100159-100102159	plot GCA_001624445.1_CAST_EiJ_v1
017	2016	GCA_001632575.1_C3H_HeJ_v1	GCA_001632575.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	19436	307	6287513	26	12931709	1000, 1, chr1:52782023-52784023	plot GCA_001632575.1_C3H_HeJ_v1
018	2016	GCA_001624535.1_FVB_NJ_v1	GCA_001624535.1	SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b	14811	355	4902432	11	8504942	1000, 1, chr17:22790916-22792916	plot GCA_001624535.1_FVB_NJ_v1
019	2013	CHM1	GCF_000306695.2	SRPRISM v. 2.4.28-alpha; ARGO v. 0.1	85	86	10897	88	65164	319, 10, chr6:108876987-108877634	plot CHM1
020	2014	acaChl1	GCF_000695815.1	SOAPdenovo v. 1.6	5	170	1250	188	2340	722, 188, KK833582:5976-7607	plot acaChl1
023	2009	ailMel1	GCF_000004335.2	tbd	48	104	10594	1193	82504	75, 1, GL192694.1:348745-348895	plot ailMel1
024	2012	allMis1	GCF_000281125.1	Allpaths v. R41313; manual scaffolding	1151	83	273934	1	74939	999, 1, JH739280:136433-138431	plot allMis1
025	2013	allSin1	GCF_000455745.1	SOAPdenovo v. 1.05	95	125	26114	2265	261774	69, 10, KE696011:2095494-2095641	plot allSin1
026	2013	amaVit1	GCA_000332375.1	Ray software v. 3	10099	81	1392334	172	2756641	492, 13, KB238901:2710-3706	plot amaVit1
027	2013	anaPla1	GCF_000355885.1	SOAPdenovo Release v. 1.03	31	251	10663	1660	94318	99, 1, KB742632:907264-907462	plot anaPla1
028	2014	ancCey1	GCA_000688135.1	Velvet v. 1.2.05; BGI GapCloser v. 1.12 (release_2011); HaploMerger v. 20111230; ERANGE v. 3.2	805	154	171926	1	85569	981, 1, JARK01000206v1:43215-45177	plot ancCey1
029	2014	angJap1	GCA_000470695.1	CLC NGS Cell v. 3.2; CLC NGS Cell v. 4.0beta	4539	91	477038	1	610535	588, 1, KI304555:142639-143815	plot angJap1
030	2007	anoCar1	tbd	tbd	20	383.5	8167	537.5	23338	965, 100, scaffold_84:3853690-3855719	plot anoCar1
031	2010	anoCar2	GCF_000090745.1	Arachne v. 3.0.0	25	240	6694	258	26105	318, 100, chr4:54548520-54549255	plot anoCar2
032	2003	anoGam1	tbd	tbd	7	528	3139	1000	21041	1000, 384, chr2L:5019927-5022310	plot anoGam1
033	2013	apaSpi1	GCA_000385615.1	SOAPdenovo v. 1.0.5	607	61	34340	100	56961	86, 10, KB929338:2579176-2579357	plot apaSpi1
035	2004	apiMel1	tbd	tbd	216	50	12150	10	24454	64, 1, Group14.17:517485-517613	plot apiMel1
036	2005	apiMel2	tbd	tbd	133	50	7371	50	19757	168, 50, Group4:4855105-4855490	plot apiMel2
037	2005	apiMel3	tbd	tbd	199	62	16045	50	27354	198, 50, Group15:1672512-1672957	plot apiMel3
038	2010	apiMel4	GCF_000002195.4	Atlas assembly system v. before 2011	226	52.5	13378	50	24561	167, 50, Group14:1674117-1674500	plot apiMel4
039	2008	aplCal1	tbd	tbd	25	77	3383	100	16863	390, 100, scaffold_1802:24095-24974	plot aplCal1
040	2014	aptFor1	GCF_000699145.1	SOAPdenovo v. 1.6	109	147	26798	1575	323838	779, 98, KL225582:135043-136698	plot aptFor1
041	2015	aptMan1	GCF_001039765.1	tbd	15742	124	4653010	1	3331011	1000, 1, NW_013987125v1:2508272-2510272	plot aptMan1
042	2014	aquChr1	GCA_000696035.1	ABySS v. 1.3.6	4592	43	201248	65	16118238	65, 1, KK850461:8872-9002	plot aquChr1
043	2014	aquChr2	GCA_000766835.1	AllPaths-LG v. August 2013	326	82.5	31349	1	143600	1000, 1, KN265664v1:16826772-16828772	plot aquChr2
044	2013	araMac1	GCA_000400695.1	CLC Genomics Workbench v. 4.9	120	48.5	7929	33	27135	241, 2, KE047968:4314-4797	plot araMac1
045	1880	araTha1	GCF_000001735.3	tbd	1	289	289	60	60	289, 60, chr3:13855281-13855918	plot araTha1
046	2012	ascSuu1	GCA_000298755.1	SOAPdenovo v. 1.04	9	404	3688	555	6481	1000, 247, JH879107v1:69728-71974	plot ascSuu1
047	2013	astMex1	GCF_000372685.1	AllPathsLG v. Jan-2013	1385	78	137888	100	1964877	647, 1, KB872443:19678-20972	plot astMex1
048	2013	balAcu1	GCF_000493695.1	SOAPdenovo v. 16-Mar-2012	211	149	57860	821	371511	926, 15, KI537556:2252563-2254429	plot balAcu1
049	2014	balPav1	GCA_000709895.1	SOAPdenovo v. 1.6	5	270	1303	216	1098	391, 46, KL482982:8685-9512	plot balPav1
050	2014	bisBis1	GCA_000754665.1	MaSuRCA v. 2.1.0	8184	72	712109	100	947641	933, 100, KN265089v1:519297-521262	plot bisBis1
052	2011	bosMut1	GCA_000298355.1	SOAPdenovo v. 1.14	139	83	27917	1274	256420	71, 14, JH880933:479978-480133	plot bosMut1
053	2004	bosTau1	tbd	tbd	6550	40	289123	50	609155	200, 50, SCAFFOLD51732:9156-9605	plot bosTau1
054	2005	bosTau2	tbd	tbd	4361	105	564259	50	2525381	997, 50, scaffold4383:34413-36456	plot bosTau2
055	2006	bosTau3	tbd	tbd	411	51	38673	50	270212	1000, 50, chr10:68862764-68864813	plot bosTau3
056	2007	bosTau4	tbd	tbd	437	53	52814	50	376407	1000, 50, chr10:75537624-75539673	plot bosTau4
057	2009	bosTau5	tbd	tbd	435	53	51742	50	376650	1000, 50, chr10:75464684-75466733	plot bosTau5
058	2009	bosTau6	GCF_000003055.5	UMD Overlapper v. 2009; additional processing	789	670	463109	100	87080	923, 1, chr22:31476636-31478482	plot bosTau6
059	2011	bosTau7	tbd	tbd	413	55	39706	50	141131	1000, 50, chr10:75201034-75203083	plot bosTau7
060	2014	bosTau8	GCF_000003055.5	UMD Overlapper v. 2009; additional processing	789	670	463109	100	87080	923, 1, chr22:31476636-31478482	plot bosTau8
061	2009	bosTauMd3	tbd	tbd	789	670	463109	100	87080	923, 1, chr22:31476636-31478482	plot bosTauMd3
062	2006	braFlo1	tbd	tbd	31	484	14260	417	12668	375, 1, chrUn:879323570-879324320	plot braFlo1
063	2008	braFlo2	tbd	tbd	22	439	8529	411	9064	36, 1, Bf_V2_248:1229532-1229604	plot braFlo2
064	1880	braRap1	GCF_000309985.1	SOAPdenovo v. 1.04	12	104	3193	2810	47557	587, 472, chrUn_JH977260:73788-75433	plot braRap1
065	2007	bruMal1	tbd	tbd	55	50	6093	1	18780	87, 1, Bmal_supercontig14387:293-467	plot bruMal1
066	2014	bruMal2	tbd	tbd	46	124.5	12221	431.5	63506	1000, 20, Bmal_v3_scaffold83:22898-24917	plot bruMal2
067	2013	bubBub1	GCF_000471725.1	MaSuRCA v. 1.8.3	2383	163	395268	100	251657	990, 100, KI418684:2409965-2412044	plot bubBub1
068	2014	bucRhi1	GCF_000710305.1	SOAPdenovo v. 1.6	31	114	5089	78	3263	327, 10, KL526600:8925-9588	plot bucRhi1
070	2011	burXyl1	tbd	tbd	65	601	33110	301	19553	977, 300, scaffold00460:102617-104870	plot burXyl1
071	2010	caeAng1	GCA_000165025.1	Velvet v. 0.7.56	414	41	16726	2	1802	46, 2, scafRNAPATH105:2285-2378	plot caeAng1
072	2012	caeAng2	tbd	tbd	461	46	19505	2	1495	46, 2, Cang_2012_03_13_00008:384957-385050	plot caeAng2
073	2008	caeJap1	tbd	tbd	135	58	10431	186	27893	687, 10, chrUn:37794313-37795696	plot caeJap1
074	2009	caeJap2	tbd	tbd	765	103	130030	1018	891958	707, 10, chrUn:150512438-150513861	plot caeJap2
075	1880	caeJap2a	tbd	tbd	764	103	129273	1018	890958	707, 10, Cjap_Contig4853:3969-5392	plot caeJap2a
077	2010	caeJap4	GCA_000147155.1	Celera assembler v. 6.0	16	98.5	3188	20	1468	1000, 20, Scaffold17129:65445-67464	plot caeJap4
078	2007	caePb1	tbd	tbd	115	44	9160	164	37674	476, 10, chrUn:52430125-52431086	plot caePb1
079	2008	caePb2	tbd	tbd	83	37	3814	222	63681	230, 10, chrUn:74484521-74484990	plot caePb2
080	2010	caePb3	GCA_000143925.2	PCAP v. 9/3/04	89	37	4915	222	74680	230, 10, Scfld02_75:384084-384553	plot caePb3
081	2005	caeRem1	tbd	tbd	58	96	10213	133.5	11238	678, 10, SuperCont3:723391-724756	plot caeRem1
082	2006	caeRem2	tbd	tbd	58	96	10213	133.5	11238	678, 10, chrUn:13919319-13920684	plot caeRem2
083	2007	caeRem3	tbd	tbd	46	50	5760	197.5	14178	460, 10, chrUn:27560772-27561701	plot caeRem3
084	2007	caeRem4	GCF_000149515.1	tbd	46	50	5760	197.5	14178	460, 10, Crem_Contig253:25277-26206	plot caeRem4
085	2010	caeSp111	GCA_000186765.1	Celera assembler v. 6.0	4	194.5	760	20	80	333, 20, Scaffold629:32984714-32985399	plot caeSp111
086	2012	caeSp51	tbd	tbd	14	34	730	12.5	894	201, 3, Csp5_scaffold_09411:792-1196	plot caeSp51
087	2010	caeSp71	tbd	tbd	535	47	30250	213	312209	162, 20, Scaffold11:29462-29805	plot caeSp71
088	2010	caeSp91	tbd	tbd	26	217.5	7172	8745	180575	1000, 20, Scaffold7498:303469-305488	plot caeSp91
089	2014	calAnn1	GCF_000699085.1	SOAPdenovo v. 1.6	89	127	16337	1006	168943	440, 38, KL218155:301090-302007	plot calAnn1
090	2007	calJac1	tbd	tbd	1597	42	129367	182	377725	937, 10, Contig4771:110891-112774	plot calJac1
091	2009	calJac3	GCF_000004665.1	PCAP v. 2009	1516	43	116646	183.5	452860	807, 10, chr3:111956760-111958383	plot calJac3
092	2013	calMil1	GCF_000165045.1	Celera v. 6.1	31	123	8335	100	70257	1000, 100, KI635945:3331497-3333596	plot calMil1
093	2011	camFer1	GCF_000311805.1	SOAPdenovo v. V1.05	11	205	2059	129	2031	237, 2, KB018701:319294-319769	plot camFer1
094	2004	canFam1	tbd	tbd	12	153	2669	210.5	8118	104, 1, chr18:45376349-45376557	plot canFam1
095	2005	canFam2	tbd	tbd	32	199.5	8095	1	5245	746, 1, chrUn:76334072-76335564	plot canFam2
096	2011	canFam3	GCF_000002285.3	Arachne v. April 2010	34	175.5	8234	10	4545	746, 10, chrUn_JH374132:3424-4925	plot canFam3
099	2014	capCar1	GCF_000700745.1	SOAPdenovo v. 1.6	4	105	618	48	354	139, 26, KL359104:23556-23859	plot capCar1
100	2012	capHir1	GCF_000317765.1	SOAPdenovo v. 1.03	627	41	71810	100	546475	988, 16, chr16:40339512-40341503	plot capHir1
101	2014	carCri1	GCF_000690535.1	SOAPdenovo v. 1.6	4	161	644	210.5	878	52, 13, KK509558:67998-68114	plot carCri1
102	2005	cavPor2	tbd	tbd	393	427	164744	100	166667	986, 100, scaffold_291164:123135-125206	plot cavPor2
103	2008	cavPor3	GCF_000151735.1	unknown v. before 2008	3	145	552	100	961	313, 100, scaffold_799:9280-10005	plot cavPor3
104	2002	cb1	tbd	tbd	81	163	20408	145	39126	645, 10, chrUn:51532611-51533910	plot cb1
105	2005	cb2	tbd	tbd	86	153	21033	163.5	42461	645, 10, chrI:9244132-9245431	plot cb2
106	2007	cb3	tbd	tbd	80	148.5	19176	166.5	39580	645, 10, chrI:9355978-9357277	plot cb3
107	2011	cb4	tbd	tbd	86	153	20969	151.5	40114	645, 10, chrI:11247250-11248549	plot cb4
118	2012	cerSim1	GCF_000283155.1	ALLPATHS v. R41370	1818	68	129697	100	270005	815, 100, JH767775:6384924-6386653	plot cerSim1
119	2014	chaVoc1	GCF_000708025.1	SOAPdenovo v. 1.6	47	200	13700	1514	133699	780, 257, KL409415:13594818-13596634	plot chaVoc1
120	2014	chaVoc2	GCF_000708025.1	SOAPdenovo v. 1.6	47	200	13700	1514	133699	780, 257, KL873469:13594818-13596634	plot chaVoc2
121	2013	cheMyd1	GCF_000344595.1	SOAPdenovo v. 1.05	129	204	37111	798	277853	314, 27, KB535131:1778822-1779476	plot cheMyd1
122	2012	chiLan1	GCA_000276665.1	ALLPATHS v. R40776	1183	70	101029	100	267937	996, 100, JH721987:2542897-2544988	plot chiLan1
123	2013	chlSab1	tbd	tbd	23634	81	2123928	10	396229	923, 1, chrX:117110178-117112024	plot chlSab1
124	2014	chlSab2	GCF_000409795.2	ALLPATHS and Newbler v. 13-Feb-2013	23631	81	2123656	10	396199	923, 1, chrX:117110178-117112024	plot chlSab2
125	2014	chlUnd1	GCF_000695195.1	SOAPdenovo v. 1.6	5	293	1223	129	617	310, 65, KK747264:28313-28997	plot chlUnd1
126	2008	choHof1	GCA_000164785.1	tbd	104	54.5	14520	145.5	33892	986, 100, scaffold_56240:3133-5204	plot choHof1
127	2012	chrAsi1	GCF_000296735.1	allpaths v. R42316 HAPLOIDIFY=True	3416	76	339291	100	720504	991, 100, JH823765:402000-404081	plot chrAsi1
128	2011	chrPic1	tbd	tbd	7555	79	738667	50	1230115	64, 1, JH584466:5301285-5301413	plot chrPic1
129	2014	chrPic2	GCA_000241765.2	Newbler v. 2.6	6315	77	629230	206	2593694	1000, 10, chrUn_KK083066v1:1300793-1302802	plot chrPic2
130	2002	ci1	GCA_000183065.1	tbd	28	311.5	8955	50	11060	833, 50, Scaffold_7:289989-291704	plot ci1
131	2005	ci2	tbd	tbd	2	472.5	945	173	346	843, 296, scaffold_403:40134-42115	plot ci2
132	2011	ci3	GCF_000224145.1	tbd	22	258.5	6455	50	9493	597, 50, chrUn_NW_004190451v1:5050-6293	plot ci3
133	2003	cioSav1	tbd	tbd	8	124	1554	100	2755	296, 100, ps_146:263977-264668	plot cioSav1
134	2005	cioSav2	tbd	tbd	6	402.5	2394	200	1668	636, 10, reftig_72:2536022-2537303	plot cioSav2
135	2015	colAng1	GCF_000951035.1	AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2	5690	77	626146	50	1472786	996, 50, NW_012119888v1:35718-37759	plot colAng1
136	2013	colLiv1	GCF_000337935.1	SOAPdenovo v. 2.0	19	116	3824	1290	32865	33, 57, KB379196:2050-2172	plot colLiv1
137	2014	colStr1	GCF_000690715.1	SOAPdenovo v. 1.6	5	161	910	308	1203	362, 113, KK530485:3407-4243	plot colStr1
138	2012	conCri1	GCF_000260355.1	AllPaths v. 2012	1110	72	108033	100	233431	924, 100, JH655880:49229854-49231801	plot conCri1
139	2014	corBra1	GCF_000691975.1	SOAPdenovo v. 1.6	41	90	7520	1445	112176	259, 28, KK718436:193091-193636	plot corBra1
140	2014	corCor1	GCF_000738735.1	AllPaths v. Allpaths-LG version 41687	21	81	2189	1027	27602	81, 1, KL997637:955359-955521	plot corCor1
141	2013	cotJap1	GCA_000511605.1	Soapdenovo v. 1.0.5b; bwa v. 0.5.9; SSPACE v. 1.2	1122	33	38101	68	67651	214, 1, DF262918:84572-85000	plot cotJap1
142	2013	criGri1	GCF_000419365.1	SOAPdenovo v. 2.2	588	217	196516	1481.5	1359815	422, 10, KE379019:554914-555767	plot criGri1
143	2011	criGriChoV1	GCF_000223135.1	SOAPdenovo v. 1.05	213	162	53736	1526	472877	369, 10, NW_003615838v1:158557-159304	plot criGriChoV1
144	2014	cucCan1	GCF_000709325.1	SOAPdenovo v. 1.6	113	242	41656	972	203191	961, 69, KL448150:311854-313844	plot cucCan1
145	2014	cynSem1	GCF_000523025.1	SOAPdenovo v. April-2011	78	311.5	27891	935.5	165198	568, 38, chr11:13981930-13983103	plot cynSem1
146	2014	cypVar1	GCA_000732505.1	AllPaths v. May 2014	3240	89	423504	1	2210432	1000, 1, KL653732:89449-91449	plot cypVar1
147	2003	danRer1	tbd	tbd	1280	57	186413	10	322061	1000, 10, chr25:16217228-16219237	plot danRer1
148	2014	danRer10	GCF_000002035.5	tbd	575	174	105525	10	17550	484, 10, chr5:1032421-1033398	plot danRer10
149	2004	danRer2	tbd	tbd	1150	58	191859	10	223764	1000, 10, chr10:26174984-26176993	plot danRer2
150	2005	danRer3	tbd	tbd	819	58	88143	10	121196	776, 10, chrUn:112388525-112390086	plot danRer3
151	2006	danRer4	tbd	tbd	726	65.5	121967	14	135012	705, 11, chr25:30060270-30061690	plot danRer4
152	2007	danRer5	tbd	tbd	1559	170	288298	100	155702	73, 1, chr21:35548773-35548919	plot danRer5
153	2008	danRer6	tbd	tbd	1421	133	225674	100	142101	1000, 100, Zv8_scaffold431:54613-56712	plot danRer6
154	2010	danRer7	GCF_000002035.4	tbd	1245	164	217595	100	124500	900, 100, chr22:2241720-2243619	plot danRer7
155	2005	dasNov1	tbd	tbd	55	123	12971	111	31368	681, 100, scaffold_3005:3743-5204	plot dasNov1
156	2008	dasNov2	tbd	tbd	109	136	25865	100	58752	836, 100, scaffold_3394:70496-72267	plot dasNov2
157	2011	dasNov3	GCF_000208655.1	Celera Assembler v. 6.0; Atlas-Link; Atlas-Gap-Fill	239	46	16270	50	94236	677, 50, JH564516:24848-26251	plot dasNov3
158	2014	dicLab1	GCA_000689215.1	tbd	275	423	116519	203	134149	994, 20, HG916850:2956140-2958147	plot dicLab1
159	2008	dipOrd1	GCA_000151885.1	tbd	219	46	46012	379	102683	1000, 100, scaffold_2463:9467-11566	plot dipOrd1
160	2013	dirImm1	tbd	tbd	505	175	132528	2	32073	999, 1, nDi_2_2_scaf00035:47420-49418	plot dirImm1
161	2003	dm1	tbd	tbd	9	252	2984	20	1237	604, 20, chrU:5250525-5251752	plot dm1
162	2004	dm2	tbd	tbd	8	362	2818	20	1217	604, 20, chrU:5250525-5251752	plot dm2
163	2006	dm3	tbd	tbd	20	286	4907	100	423940	276, 20, chrU:4943122-4943693	plot dm3
164	2014	dm6	GCF_000001215.4	tbd	15	333	4828	100	1340	276, 20, chrUn_DS483709v1:12934-13505	plot dm6
165	2003	dp2	tbd	tbd	113	64	11633	10	9049	784, 10, Contig4969_Contig4496:202614-204191	plot dp2
166	2004	dp3	tbd	tbd	136	79.5	17354	79.5	14988	485, 11, chrU:7044759-7045739	plot dp3
167	2006	dp4	tbd	tbd	183	81	19720	50	18528	798, 50, chrXL_group1e:8376310-8377955	plot dp4
168	2012	droAlb1	GCA_000298335.1	SOAPdenovo v. 1.04	4360	30	131320	22	152454	76, 1, JH853217:889-1041	plot droAlb1
169	2004	droAna1	tbd	tbd	103	252	28853	100	10300	943, 100, 2448822:95133-97118	plot droAna1
170	2005	droAna2	tbd	tbd	32	160	7905	701	72786	791, 25, scaffold_13266:420335-421941	plot droAna2
171	2006	droAna3	GCF_000005115.1	tbd	35	143	8663	671	75001	707, 25, scaffold_13230:483470-484908	plot droAna3
172	2013	droBia2	GCA_000233415.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	14	116.5	2103	20	294	447, 20, KB462730:148150-149063	plot droBia2
173	2013	droBip2	GCA_000236285.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_calland_upgrade.pl v. 1.0	26	103.5	3925	20	520	409, 20, KB464242:790791-791628	plot droBip2
174	2013	droEle2	GCA_000224195.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATKv. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	22	205	4879	20	440	480, 20, KB458480:1051747-1052726	plot droEle2
175	2005	droEre1	tbd	tbd	8	86.5	1545	731	6855	773, 25, scaffold_4784:23686196-23687766	plot droEre1
176	2006	droEre2	GCF_000005135.1	tbd	14	221	4384	239	7433	763, 25, scaffold_4784:18133045-18134595	plot droEre2
177	2013	droEug2	GCA_000236325.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	17	52	1627	20	237	72, 1, AFPQ02002129:815-959	plot droEug2
178	2013	droFic2	GCA_000220665.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	11	352	3277	20	220	424, 20, KB457328:1582-2449	plot droFic2
179	2005	droGri1	tbd	tbd	17	76	2908	444	11143	734, 312, scaffold_24659:1579-3358	plot droGri1
180	2006	droGri2	GCF_000005155.2	tbd	48	60.5	5904	430.5	52107	774, 25, scaffold_15245:16809148-16810720	plot droGri2
181	2013	droKik2	GCA_000224215.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	12	102	1812	20	1721	361, 20, KB458730:24774-25515	plot droKik2
182	2013	droMir2	GCA_000269505.2	Newbler v. 2.6	122	72	16465	10	57520	1000, 10, chr2:9770771-9772780	plot droMir2
184	2005	droMoj2	tbd	tbd	22	219.5	7748	366.5	30847	969, 25, scaffold_6496:4573125-4575087	plot droMoj2
185	2006	droMoj3	GCF_000005175.2	tbd	16	343	6118	426	29359	859, 25, scaffold_6496:14181729-14183471	plot droMoj3
186	2005	droPer1	GCF_000005195.2	tbd	28	402	10502	100	10914	937, 100, super_12:105769-107742	plot droPer1
187	2013	droPse3	GCF_000001765.3	PBJelly v. 12.8.2; Atlas genome assembly	12	51	1309	86	3307	718, 50, chr3:13529933-13531418	plot droPse3
188	2013	droRho2	GCA_000236305.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	35	167	7228	20	1286	454, 20, KB451407:7018-7945	plot droRho2
189	2005	droSec1	GCA_000005215.1	tbd	17	399	6822	100	5318	765, 100, super_59:77146-78775	plot droSec1
190	2005	droSim1	tbd	tbd	109	106	23001	298	40703	801, 10, chr2L:4623692-4625303	plot droSim1
191	2014	droSim2	GCF_000754195.2	Velvet v. 1.1.04	104	58	5999	10	1818	359, 8, chr2R:7425888-7426613	plot droSim2
192	2013	droSuz1	GCA_000472105.1	SOAPdenovo v. 2	71	185	16489	1565	196054	364, 76, KI420423:11753-12556	plot droSuz1
193	2013	droTak2	GCA_000224235.2	Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0	13	102	2070	20	260	472, 20, KB461286:709634-710597	plot droTak2
194	2004	droVir1	tbd	tbd	48	328.5	15839	25	16648	698, 25, scaffold_10:2740496-2741916	plot droVir1
195	2005	droVir2	tbd	tbd	13	232	3421	1415	46365	503, 25, scaffold_13324:149342-150372	plot droVir2
196	2006	droVir3	GCF_000005245.1	tbd	12	341	4206	1536.5	45200	423, 25, scaffold_13324:149231-150101	plot droVir3
197	2006	droWil1	GCF_000005925.1	tbd	23	248	8712	1330	51159	759, 50, scaffold_181150:697726-699293	plot droWil1
198	2006	droWil2	GCF_000005925.1	tbd	23	248	8712	1330	51159	759, 50, CH964291:697726-699293	plot droWil2
199	2004	droYak1	tbd	tbd	65	340	25549	250	24358	955, 50, chrU:40768288-40770247	plot droYak1
200	2005	droYak2	tbd	tbd	99	170	26922	54	37713	684, 10, chr2L:22155365-22156742	plot droYak2
201	2006	droYak3	GCF_000005975.2	tbd	85	143	20479	10	23713	684, 10, chr2L:22155365-22156742	plot droYak3
204	2005	echTel1	tbd	tbd	89	83	17114	100	22024	805, 100, scaffold_272928:13200-14909	plot echTel1
205	2012	echTel2	GCF_000313985.1	ALLPATHS v. R37599	3871	93	620444	100	656358	998, 100, JH980317:1376657-1378752	plot echTel2
206	2014	egrGar1	GCF_000687185.1	SOAPdenovo v. 1.6	112	213.5	33121	1093.5	229589	998, 134, KK502338:445846-447975	plot egrGar1
207	2013	eidHel1	GCA_000465285.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	27	45	1294	1	186	68, 1, KE769079:2720-2856	plot eidHel1
208	2012	eleEdw1	GCF_000299155.1	allpaths v. R42301 HAPLOIDIFY=True	1643	71	141553	100	311199	1000, 100, JH947463:2106240-2108339	plot eleEdw1
209	2012	eptFus1	GCF_000308155.1	ALLPATHS v. R40371	1641	75	188916	100	378407	988, 100, JH977647:11513546-11515621	plot eptFus1
210	2007	equCab1	tbd	tbd	17	457	5982	100	6200	715, 100, chr2:10720193-10721722	plot equCab1
211	2007	equCab2	tbd	tbd	4	160.5	610	1909	18507	258, 295, chr22:17653073-17653883	plot equCab2
212	2014	equPrz1	GCA_000696695.1	SOAPdenovo v. 1.05	39	49	5163	49	12408	78, 11, KK955445:38997-39163	plot equPrz1
213	2006	eriEur1	tbd	tbd	343	435	146738	100	209198	1000, 100, scaffold_366352:52823-54922	plot eriEur1
214	2012	eriEur2	GCF_000296755.1	allpaths v. R41008	3596	70	265454	100	1205265	1000, 100, JH835375:3514396-3516495	plot eriEur2
215	2014	esoLuc1	GCA_000721915.1	AllPaths v. 43500	9785	81	734131	15	1227519	950, 10, LG19:14032217-14034126	plot esoLuc1
217	2014	eurHel1	GCF_000690775.1	SOAPdenovo v. 1.6	2	89.5	179	436	872	113, 451, KK569808:53808-54484	plot eurHel1
219	2013	falChe1	GCF_000337975.1	SOAPdenovo v. 1.4	27	206	7614	685	35918	51, 10, KB397780:7020361-7020472	plot falChe1
220	2013	falPer1	GCF_000337955.1	SOAPdenovo v. 1.4	6	48.5	530	631.5	4836	36, 10, KB391040:3398436-3398517	plot falPer1
221	1880	felCat1	tbd	tbd	1343	353	504058	874	2708782	1000, 100, scaffold_217423:45453-47552	plot felCat1
222	2006	felCat3	tbd	tbd	1343	353	504058	874	2708782	1000, 100, scaffold_217423:45453-47552	plot felCat3
223	2008	felCat4	GCA_000003115.1	tbd	9736	503	4582767	10	9398414	1000, 10, chrA2:8725380-8727389	plot felCat4
224	2011	felCat5	GCF_000181335.1	Celera Assembler v. 6.1	27	72	6437	20	100569	488, 20, chrB2:22462351-22463346	plot felCat5
225	2014	felCat8	GCF_000181335.2	CABOG v. 6.2; MaSuRCA assembler v. 8.0; GAA v. 1.0	630	55	50300	10	89447	895, 14, chrB3:27250577-27252380	plot felCat8
226	2013	ficAlb2	GCF_000247815.1	SOAPdenovo v. 1.05	632	77	75592	40.5	206854	982, 1, chr7:28154426-28156390	plot ficAlb2
227	2002	fr1	tbd	tbd	76	155.5	19306	50	16684	71, 1, chrUn:149577204-149577346	plot fr1
228	2004	fr2	tbd	tbd	5	313	1682	512	2231	47, 1, chrUn:336404518-336404612	plot fr2
229	2011	fr3	GCF_000180615.1	tbd	6	229	1827	286	2291	47, 1, HE592038:5063-5157	plot fr3
230	2014	fulGla1	GCF_000690835.1	SOAPdenovo v. 1.6	8	336.5	2583	103.5	1637	450, 20, KK597768:8602-9521	plot fulGla1
231	2010	gadMor1	GCA_000231765.1	tbd	168	53	11363	270	70748	51, 1, CAEA01526699:46-148	plot gadMor1
232	2004	galGal2	tbd	tbd	114	40	12930	124	17674	778, 21, chr3:68417113-68418689	plot galGal2
233	2006	galGal3	tbd	tbd	729	37	34199	500	325853	479, 10, chrUn_random:55035794-55036761	plot galGal3
234	2011	galGal4	GCF_000002315.3	Celera Assembler v. 5.4	55	401	22946	100	31537	805, 100, chr19:3903221-3904930	plot galGal4
235	2015	galGal5	GCF_000002315.4	MHAP/PBcR v. 8.2beta	1	33	33	795	795	33, 795, chrUn_NT_465606v1:9086-9946	plot galGal5
236	2014	galVar1	GCF_000696425.1	SOAPdenovo2 v. April 2014	58964	61	5626241	419	24866346	997, 1, NW_007727116v1:311725-313719	plot galVar1
237	2006	gasAcu1	tbd	tbd	8	46.5	1970	117.5	2520	841, 100, chrUn:38727446-38729227	plot gasAcu1
239	2009	gavGan0	tbd	tbd	30236	134	5187944	5000	145799649	915, 10, scaffold24725:12789-14628	plot gavGan0
240	2014	gavSte1	GCF_000690875.1	SOAPdenovo v. 1.6	5	164	848	318	2312	269, 245, KK640233:828-1610	plot gavSte1
241	2012	geoFor1	GCF_000277835.1	SOAPdenovo v. 2.01	32	105.5	4877	945.5	51025	617, 11, JH739922:1318693-1319937	plot geoFor1
243	2009	gorGor2	tbd	tbd	6585	247	2365617	10	499615	1000, 10, chr10_101645027_418909:206049-208058	plot gorGor2
244	2011	gorGor3	GCF_000151905.1	tbd	6926	246	2475426	10	533805	1000, 10, chr10:101539188-101541197	plot gorGor3
245	2014	gorGor4	GCA_000151905.3	tbd	8691	94	1514940	25	982883	246, 1, chr9:24397320-24397812	plot gorGor4
247	2009	haeCon1	tbd	tbd	25	39	1031	10	1745	58, 10, Hcon_Contig0056815:13389-13514	plot haeCon1
248	2013	haeCon2	tbd	tbd	5378	149	831727	55	351011	700, 1, scaffold_63:260903-262303	plot haeCon2
249	2014	halAlb1	GCF_000691405.1	SOAPdenovo v. 1.6	11	126	1936	370	3807	466, 102, KK641449:26277-27310	plot halAlb1
250	2014	halLeu1	GCF_000737465.1	SOAPdenovo2 v. May 2014	14	280	4342	95	1676	194, 10, KL869356:8708537-8708934	plot halLeu1
251	2011	hapBur1	GCF_000239415.1	ALLPATHS-LG v. R35951	965	95	135908	20	374038	975, 20, JH425754:7557-9526	plot hapBur1
252	2011	hetBac1	GCA_000223415.1	Celera assembler v. 6.0	3	228	1282	20	60	1000, 20, GL996479v1:885362-887381	plot hetBac1
253	2011	hetGla1	tbd	tbd	743	313	285174	1994	2914751	785, 43, JH165660:4306-5918	plot hetGla1
254	2012	hetGla2	GCF_000247695.1	AllPaths v. R39605	595	70	44604	100	201552	1000, 100, JH602085:17402968-17405067	plot hetGla2
255	2009	hg19	tbd	tbd	1	200	200	3000000	3000000	200, 3000000, chrY:10104354-13104753	plot hg19
256	2013	hg38	GCF_000001405.26	tbd	12	78	974	440	56689	125, 20, chrUn_KI270442v1:175618-175887	plot hg38
259	2012	jacJac1	GCF_000280705.1	ALLPATHS v. R41689 HAPLOIDIFY=True	2666	63	196366	100	569918	1000, 100, JH725440:52488719-52490818	plot jacJac1
260	2011	latCha1	GCF_000225785.1	AllPaths v. R36819	2038	77	159059	100	504858	955, 100, JH127253:476850-478859	plot latCha1
262	2014	lepDis1	GCF_000691785.1	SOAPdenovo v. 1.6	1	50	50	229	229	50, 229, KK681583:9399-9727	plot lepDis1
263	2011	lepOcu1	GCF_000242695.1	AllPaths v. R38293	2079	95	232474	100	466733	1000, 100, chrLG4:37780111-37782210	plot lepOcu1
264	2013	lepWed1	GCF_000349705.1	allpaths v. R41856 HAPLOIDIFY=True	2022	63	135843	100	1218867	1000, 100, KB715312:1023296-1025395	plot lepWed1
265	2013	letCam1	GCA_000466285.1	Newbler v. 2.7	1453	69	123952	100	739039	280, 39, KE994354:70338-70936	plot letCam1
266	1880	linHum0	GCF_000217595.1	CABOG v. 5.3	179	48	10176	100	20986	480, 100, NW_012159984:28893-29952	plot linHum0
267	2013	lipVex1	GCF_000442215.1	SOAPdenovo v. 2.01	292	92	66483	985.5	386576	876, 10, KE557659:158624-160385	plot lipVex1
268	2012	loaLoa1	GCA_000183805.3	Newbler v. 2.1-PreRelease-4/28/2009	376	382	123384	215	94547	604, 20, JH712068v1:803529-804756	plot loaLoa1
269	2005	loxAfr1	tbd	tbd	79	44	11426	206	80801	687, 284, scaffold_10531:71539-73196	plot loxAfr1
270	2008	loxAfr2	tbd	tbd	78	165.5	20735	1078	180887	989, 100, scaffold_3386:17920-19997	plot loxAfr2
271	2009	loxAfr3	GCF_000001905.1	tbd	11	45	1924	398	9784	731, 100, scaffold_211:333226-334787	plot loxAfr3
272	2007	macEug1	tbd	tbd	7319	57	504656	10	562759	146, 1, Scaffold27901:25044-25336	plot macEug1
273	2009	macEug2	GCA_000004035.1	tbd	11689	55	752361	50	1102638	146, 1, GL058785:13153-13445	plot macEug2
274	2013	macFas5	GCF_000364345.1	SOAPdenovo v. 1.0.5, SRPRISM v. 2.4; ARGO v. 0.1	1138	106.5	145024	204.5	1039415	849, 10, chr14:81860376-81862083	plot macFas5
275	2015	macNem1	GCF_000956065.1	AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2; PBJelly2 v. 14.9.9	1828	95	237662	50	834836	982, 25, NW_012016132v1:18826350-18828338	plot macNem1
276	2014	manPen1	GCA_000738955.1	SOAPdenovo v. May 2014	37129	101	5536376	1	13090743	1000, 1, KN006700:349054-351054	plot manPen1
277	2014	manVit1	GCF_000692015.1	SOAPdenovo v. 1.6	25	231	8844	1303	65245	701, 296, KK732740:655429-657126	plot manVit1
279	2012	mayZeb1	GCF_000238955.1	AllPaths v. R37043	1831	95	241336	100	682313	1000, 100, JH720538:3252564-3254663	plot mayZeb1
280	2013	megLyr1	GCA_000465345.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	33	38	1716	1	185	83, 1, KI087181:1999-2165	plot megLyr1
281	2009	melGal1	tbd	tbd	834	127	136229	100	661041	169, 1, chr3:54352580-54352918	plot melGal1
282	2014	melGal5	GCF_000146605.2	MaSuRCA v. 1.9.2	84	181	17431	100	76065	724, 100, chrZ:7873702-7875249	plot melGal5
285	2008	melInc2	tbd	tbd	3	77	211	201	513	98, 201, MiV1ctg3:286050-286446	plot melInc2
286	2011	melUnd1	GCF_000238935.1	Celera v. 6.1	39	89	5925	41	36796	334, 20, JH556232:114057-114744	plot melUnd1
287	2014	merNub1	GCF_000691845.1	SOAPdenovo v. 1.6	2	154.5	309	361	722	245, 311, KK701714:10568-11368	plot merNub1
288	2013	mesAur1	GCF_000349665.1	allpaths v. R44683	3589	71	248381	100	755166	212, 100, KB708269:3930600-3931123	plot mesAur1
289	2014	mesUni1	GCF_000695765.1	SOAPdenovo v. 1.6	4	347	1434	124.5	451	332, 23, KK817080:7082-7768	plot mesUni1
290	1880	micMur0	tbd	tbd	295	256	90483	780	749299	997, 100, GeneScaffold_4747:166512-168605	plot micMur0
291	2007	micMur1	GCA_000165445.1	tbd	124	124.5	33320	952.5	207469	969, 100, scaffold_5185:107104-109141	plot micMur1
292	2015	micMur2	GCF_000165445.1	AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9	774	90	85250	50	267164	999, 25, KQ057470v1:2292330-2294352	plot micMur2
293	2017	micMur3	GCF_000165445.2	AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9; Lachesis v. shendurelab-LACHESIS-2151de9; BioNano IrysSolve v. 2.1	325	95	73918	50	262987	898, 10, chr2:108635511-108637316	plot micMur3
294	2012	micOch1	GCF_000317375.1	allpaths v. R41985 HAPLOIDIFY=True SPRS_WRITE_SEPS=True	6788	65	483435	100	1507707	993, 100, chr6:54381083-54383168	plot micOch1
295	2011	mm10	tbd	tbd	2	390.5	781	25879.5	51759	477, 1759, chrX_GL456233_random:239940-242652	plot mm10
296	1880	mm5	tbd	tbd	204	48.5	30180	100	76884	921, 100, chr6:132460596-132462537	plot mm5
297	2005	mm6	tbd	tbd	117	48	17647	100	48212	768, 100, chr14:100566071-100567706	plot mm6
298	2005	mm7	tbd	tbd	45	48	5475	100	64491	451, 100, chr15:68974498-68975499	plot mm7
299	2006	mm8	tbd	tbd	6	161	1257	162.5	50878	520, 353, chr14:87009574-87010966	plot mm8
300	2007	mm9	tbd	tbd	2	390.5	781	25879.5	51759	477, 1759, chrX_random:239940-242652	plot mm9
301	2004	monDom1	tbd	tbd	18	53.5	1891	127	11341	696, 100, scaffold_14754:178069-179560	plot monDom1
302	2005	monDom2	tbd	tbd	5	428	2012	100	520	870, 100, scaffold_38:23849795-23851634	plot monDom2
303	2006	monDom4	tbd	tbd	9	183	3070	1000	21732	870, 1, chr1:400420041-400421781	plot monDom4
304	2006	monDom5	tbd	tbd	9	183	3070	1000	21732	870, 1, chr1:424248968-424250708	plot monDom5
305	2013	musDom2	GCF_000371365.1	AllPathsLG v. September 2012	1284	85	165577	1	473996	1000, 1, KB855954:134298-136298	plot musDom2
306	2011	musFur1	GCA_000215625.1	ALLPATHS-LG v. R36167	1009	84	107706	44	286510	1000, 20, GL897138:9717-11736	plot musFur1
307	2013	myoBra1	GCF_000412655.1	SOAP de novo v. 2.04	356	119	85889	1109	766318	1000, 31, KE163605:2655193-2657223	plot myoBra1
308	2012	myoDav1	GCF_000327345.1	SOAPdenovo v. 1.06	303	151	56967	1283	942238	502, 19, KB106370:3092722-3093744	plot myoDav1
309	2006	myoLuc1	tbd	tbd	42	47	6392	1551	125787	388, 100, scaffold_150441:136761-137636	plot myoLuc1
310	2010	myoLuc2	GCF_000147115.1	Arachne v. Dev. Jan 2010	7	39	357	410	3363	75, 119, GL429781:8032929-8033197	plot myoLuc2
311	2014	nanGal1	GCF_000622305.1	SOAPdenovo v. 2.04.4	730	126	149781	902.5	980462	740, 12, KL200152:4088120-4089611	plot nanGal1
312	2015	nanPar1	GCA_000935625.1	SOAPdenovo v. 1.06	1716	194	477991	974	2590489	552, 12, KN907832v1:31307-32422	plot nanPar1
313	2014	nasLar1	GCA_000772465.1	phredPhrap v. 1.080812	614	43	93736	7	126885	117, 1, chr1:6190345-6190579	plot nasLar1
314	2013	necAme1	GCF_000507365.1	Newbler v. MapAsmResearch-04/19/2010-patch-08/17/2010	459	54	28538	100	92887	366, 100, KI657476v1:37386-38217	plot necAme1
315	2007	nemVec1	tbd	tbd	25	378	10288	829	17106	769, 1, scaffold_3968:6459-7997	plot nemVec1
316	2011	neoBri1	GCF_000239395.1	ALLPATHS-LG v. R36800	5040	95	1321574	20	665865	998, 20, JH422308:3325010-3327025	plot neoBri1
317	2014	nipNip1	GCF_000708225.1	SOAPdenovo v. 1.6	41	154	11937	1090	77358	514, 15, KL411148:2104426-2105468	plot nipNip1
318	2010	nomLeu1	tbd	tbd	859	141	220161	532	1139352	999, 100, GL397299:16863535-16865632	plot nomLeu1
319	2011	nomLeu2	tbd	tbd	859	141	220161	532	1139352	999, 100, GL397299:16863535-16865632	plot nomLeu2
320	2012	nomLeu3	GCA_000146795.3	tbd	861	141	220464	519	1139552	999, 100, chr5:41669854-41671951	plot nomLeu3
321	2014	notCor1	GCF_000735185.1	Celera Assembler v. 7.0	174	91.5	17942	51	21717	407, 1, KL665414:596304-597118	plot notCor1
322	1880	ochPri0	tbd	tbd	569	101	138948	1065	1840608	994, 100, GeneScaffold_4726:276480-278567	plot ochPri0
323	2008	ochPri2	GCA_000164825.1	tbd	313	55	35317	1365	1110261	967, 100, scaffold_3914:61889-63922	plot ochPri2
324	2012	ochPri3	GCF_000292845.1	Allpaths v. R41206	1958	69	148238	100	499781	890, 100, JH802177:1348834-1350713	plot ochPri3
325	2012	octDeg1	GCF_000260255.1	allpaths v. R40507 LITTLE_HELPS_BIG=False	2582	68	231489	100	464548	985, 100, JH651571:12809669-12811738	plot octDeg1
326	2013	odoRosDiv1	GCA_000321225.1	AllPaths v. 41070; Atlas-link v. 1.0; Atlas-gapfill v. 2.2	2581	68	180258	50	263661	970, 50, KB229427:1083192-1085181	plot odoRosDiv1
327	2013	oncVol1	GCA_000499405.1	tbd	10	89.5	2046	1	18211	739, 1, HG738137v1:12037947-12039425	plot oncVol1
328	2014	opiHoa1	GCF_000692075.1	SOAPdenovo v. 1.6	80	170.5	23360	1723.5	216549	855, 28, KK733898:82987-84724	plot opiHoa1
329	2013	orcOrc1	GCF_000331955.2	AllPaths v. 41070; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2	2677	66	181922	50	357696	943, 50, NW_004438742v1:126518-128453	plot orcOrc1
330	2011	oreNil1	tbd	tbd	1903	93	208888	20	734264	969, 20, GL831201:3474999-3476956	plot oreNil1
331	2007	ornAna1	GCF_000002275.2	tbd	793	49	70053	103	148119	718, 10, Contig3645:38619-40064	plot ornAna1
332	2007	ornAna2	GCA_000002275.2	tbd	793	49	70053	103	148119	718, 10, chrUn_DS182721v1:38619-40064	plot ornAna2
333	2012	oryAfe1	GCF_000298275.1	allpaths v. R40776 LITTLE_HELPS_BIG=False	3595	65	293465	100	691489	998, 100, JH863829:9451309-9453404	plot oryAfe1
334	2005	oryCun1	tbd	tbd	122	278.5	44566	462.5	91832	978, 100, scaffold_172390:787-2842	plot oryCun1
335	2009	oryCun2	GCF_000003625.3	tbd	12	44.5	836	446	9055	327, 185, chr13:6520795-6521633	plot oryCun2
336	2006	oryLat1	tbd	tbd	141	144	25310	10	215389	561, 10, chrUn:20300712-20301843	plot oryLat1
337	2005	oryLat2	tbd	tbd	141	144	25310	10	253399	445, 10, ultracontig221:437957-438856	plot oryLat2
339	2011	otoGar3	GCF_000181295.1	ALLPATHS-LG v. R35710	3569	86	332700	39	663694	985, 20, GL873641:2218538-2220527	plot otoGar3
340	2010	oviAri1	GCA_000005525.1	tbd	5934	53	394316	37	1966190	264, 1, chr15:8985870-8986398	plot oviAri1
341	2012	oviAri3	GCF_000298735.1	SOAPdenovo v. 1.03	149	193	51933	215	178445	46, 3, chr3:3466521-3466615	plot oviAri3
342	2015	oxyTri2	tbd	tbd	523	37	30028	50	25856	186, 1, chrMACsb310:15510646-15511018	plot oxyTri2
343	2013	panHod1	GCF_000400835.1	SOAPdenovo v. 2.1	321	129	65178	1092	702884	628, 10, KE118776:1218541-1219806	plot panHod1
344	2012	panPan1	GCF_000258655.1	Celera Assembler v. 5.4.3	63	133	11209	20	22114	33, 1, JH650468:842203-842269	plot panPan1
345	2015	panPan2	tbd	tbd	70	160	13388	20	1045522	35, 1, chr4:127787143-127787213	plot panPan2
346	2013	panRed1	GCA_000341325.1	Velvet v. 1.2.07	123	56	6626	10	3069	62, 10, KB454926:42673-42806	plot panRed1
347	2013	panTig1	GCF_000464555.1	SOAPdenovo v. 08-Jul-2011	59	111	12591	700	69429	398, 9, KE721804:6447970-6448774	plot panTig1
348	2003	panTro1	tbd	tbd	5719	388	2244063	100	3504041	998, 100, chr6:137473031-137475126	plot panTro1
349	2006	panTro2	tbd	tbd	692	52	62006	240	238273	717, 10, chr10_random:5205395-5206838	plot panTro2
350	2010	panTro3	tbd	tbd	472	54	44241	238.5	180280	908, 10, chr2B:124438762-124440587	plot panTro3
351	2011	panTro4	GCF_000001515.6	tbd	472	54	44241	238.5	180280	908, 10, chr2B:124438762-124440587	plot panTro4
352	2016	panTro5	GCF_000001515.7	DiscoVar v. 51280; PBJelly v. 14.9.9	2937	199	537385	100	3625772	199, 10, chr12_NW_015974005v1_random:1130-1537	plot panTro5
353	2012	papAnu2	GCF_000264685.1	CABOG v. 6.1; ATLAS-LINK v. 1.0; ATLAS-GAPFILL v. 2.0	727	138	144060	50	96682	46, 1, chr4:20965571-20965663	plot papAnu2
354	2008	papHam1	tbd	tbd	22041	56	1338445	50	2303596	376, 50, scaffold4259:86690-87491	plot papHam1
355	2014	pelCri1	GCF_000687375.1	SOAPdenovo v. 1.6	3	72	517	186	808	386, 173, KK471910:16412-17356	plot pelCri1
356	2011	pelSin1	GCF_000230535.1	SOAPdenovo v. 1.05	126	138	35062	411.5	167243	398, 10, JH212629:287260-288065	plot pelSin1
357	2013	perManBai1	GCF_000500345.1	Newbler v. 2.3 and 2.5; AllPaths v. 41070; ATLAS-gapfill v. 2.2; ATLAS-link v. 1.0	7908	80	846184	50	1552640	1000, 50, KI615759:2266069-2268118	plot perManBai1
358	2007	petMar1	tbd	tbd	542	47	48234	10	42185	746, 10, Contig3178:18125-19626	plot petMar1
359	2010	petMar2	GCA_000148955.1	Arachne v. 3.2	31	86	5681	732	39461	617, 100, GL479790:15647-16980	plot petMar2
360	2014	phaCar1	GCF_000708925.1	SOAPdenovo v. 1.6	2	206	412	79	158	261, 100, KL416242:66648-67269	plot phaCar1
361	2014	phaLep1	GCF_000687285.1	SOAPdenovo v. 1.6	14	179	2930	310	4227	343, 85, KK448216:3226-3996	plot phaLep1
362	2014	phoRub1	GCA_000687265.1	SOAPdenovo v. 1.6	4	288.5	1016	195.5	823	373, 83, KK425162:48893-49721	plot phoRub1
363	2013	phyCat1	GCF_000472045.1	AllPaths-LG v. January 2013	684	82.5	86555	100	130377	1000, 1, KI402232:538054-540054	plot phyCat1
364	2014	picPub1	GCF_000699005.1	SOAPdenovo v. 1.6	59	83	12175	970	106482	111, 28, KL217012:74310-74559	plot picPub1
365	2013	poeFor1	GCF_000485575.1	AllPaths-LG v. July 2013	848	75	84492	1	328834	972, 1, KI520524:847-2791	plot poeFor1
366	2014	poeRet1	tbd	tbd	1124	87	157426	1	421252	988, 1, chrLG12:26078504-26080480	plot poeRet1
367	1880	ponAbe1	tbd	tbd	1528	40	90824	133.5	275853	662, 10, Contig208:1185633-1186966	plot ponAbe1
368	2007	ponAbe2	tbd	tbd	2239	54	444541	100	829820	769, 1, chr11:46659515-46661053	plot ponAbe2
369	2014	priExs1	tbd	tbd	49	121	12100	1773	95166	181, 38, scaffold470:42605-43004	plot priExs1
370	2007	priPac1	tbd	tbd	121	49	10688	209	31254	90, 1, chrUn:114913780-114913960	plot priPac1
372	2014	priPac3	tbd	tbd	168	49.5	13153	274.5	50322	90, 1, Ppa_Contig2432:805-985	plot priPac3
373	2008	proCap1	GCA_000152225.1	Arachne v. before 2009	116	38	5205	534.5	65619	53, 100, scaffold_8867:32393-32598	plot proCap1
374	2013	pseHum1	GCF_000331425.1	SOAPdenovo v. 1.5	775	142	173055	10	547111	1000, 10, KB221227:5459003-5461012	plot pseHum1
375	2012	pteAle1	GCA_000325575.1	SOAPdenovo v. 1.06	97	127	19728	1023	161616	421, 16, KB031157:14150143-14151000	plot pteAle1
376	2014	pteGut1	GCF_000699245.1	SOAPdenovo v. 1.6	1	282	282	720	720	282, 720, KL237369:530-1813	plot pteGut1
377	2013	ptePar1	GCA_000465405.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	3	31	102	1	3	40, 1, KE827285:1815-1895	plot ptePar1
378	2008	pteVam1	GCA_000151845.1	tbd	68	43.5	9173	301.5	27212	971, 100, scaffold_4327:120126-122167	plot pteVam1
379	2011	punNye1	GCF_000239375.1	ALLPATHS-LG v. R37016	1574	95	242736	20	332782	992, 20, JH419321:67178-69181	plot punNye1
380	2014	pygAde1	GCA_000699105.1	SOAPdenovo v. 1.6	42	113	7740	1160.5	93198	78, 17, KL224983:2418932-2419104	plot pygAde1
381	2013	pytBiv1	GCF_000186305.1	Soap deNovo v. March 2012	21222	101	2315791	99	2845128	649, 10, KE957835:3697-5004	plot pytBiv1
386	2005	rheMac1	tbd	tbd	2816	39	116369	50	214725	205, 50, SCAFFOLD120616:17732-18191	plot rheMac1
387	2010	rheMac3	GCA_000230795.1	SOAPdenovo v. 1.0	288	192.5	71777	1140.5	887215	949, 27, chr15:33329332-33331256	plot rheMac3
388	2015	rheMac8	GCF_000772875.2	MaSuRCA v. 1.8.3; PBJelly2 v. 14.9.9	80	99.5	20122	917	437685	823, 20, chr7:1436259-1437924	plot rheMac8
389	2016	rhiBie1	GCF_001698545.1	Newbler v. 71; Anytag v. 70; GOBOND v. 69; GapCloser v. 1.12	4262	228	1007049	1	2148972	965, 1, NW_016817388v1:689035-690965	plot rhiBie1
390	2013	rhiFer1	GCA_000465495.1	CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05	2	42.5	85	1	2	45, 1, KI143993:8550-8640	plot rhiFer1
391	2014	rhiRox1	GCF_000769185.1	SOAPdenovo v. 2013.04	187	158	50999	529	184770	584, 11, KN296100v1:378785-379963	plot rhiRox1
392	1880	ricCom1	GCF_000151685.1	tbd	41	332	13808	738	38675	787, 3, EQ973819:99412-100988	plot ricCom1
393	2003	rn3	tbd	tbd	574	143	146802	50	425043	72, 1, chr4:1247786-1247930	plot rn3
394	2004	rn4	tbd	tbd	567	141	142452	50	424693	72, 1, chr4:1247786-1247930	plot rn4
395	2012	rn5	tbd	tbd	64	516	32231	50	28921	712, 1, chr3:45275318-45276742	plot rn5
396	2014	rn6	GCF_000001895.5	Atlas Assembly suite v. 2.0; CLCbio v. 1.0; Velvet v. 1.0; PBjelly v. 2.0	719	290	280406	50	1258566	712, 1, chr3:40184108-40185532	plot rn6
401	2011	saiBol1	GCA_000235385.1	AllPaths v. R37830	1541	77	139356	100	303093	1000, 100, JH378136:528784-530883	plot saiBol1
403	2011	sarHar1	GCF_000189315.1	Phusion2 v. 1.0	17494	220	2993318	158	6574378	958, 10, chr1_GL834475_random:882665-884590	plot sarHar1
404	2013	sebNig1	GCA_000475235.1	tbd	168	55.5	11782	54.5	11235	82, 2, KI499294:4621-4786	plot sebNig1
405	2013	sebRub1	GCA_000475215.1	SOAPdenovo v. 1.05	119	55	9711	51	8253	142, 1, KI444651:3586-3870	plot sebRub1
406	2014	serCan1	GCF_000534875.1	tbd	213	97	36640	20	33876	971, 1, HG009242:4536330-4538272	plot serCan1
407	2006	sorAra1	tbd	tbd	229	330	79670	100	75086	895, 100, scaffold_247593:25660-27549	plot sorAra1
408	2008	sorAra2	GCF_000181275.1	Allpaths v. R41070	3389	75	359891	100	822102	992, 100, JH798160:15867029-15869112	plot sorAra2
409	2008	speTri1	tbd	tbd	99	46	12167	879	197520	835, 100, scaffold_1259:158788-160557	plot speTri1
410	2011	speTri2	GCF_000236235.1	ALLPATHS v. R37591	2964	95	353556	100	565083	1000, 100, JH393486:3045059-3047158	plot speTri2
411	2014	stePar1	GCF_000690725.1	ALLPATHS-LG v. August 2013	554	65	47063	1	120402	952, 1, KK580894:321554-323458	plot stePar1
412	1880	strCam0	tbd	tbd	20	243	7267	836.5	40260	184, 13, superscaffold45:7169362-7169742	plot strCam0
413	2014	strCam1	GCF_000698965.1	SOAPdenovo v. 1.6	19	246	7125	759	39346	184, 13, KL206666:4120006-4120386	plot strCam1
414	2005	strPur1	tbd	tbd	1291	153	303896	50	238579	89, 1, Scaffold16400:576-754	plot strPur1
415	2006	strPur2	tbd	tbd	367	55	25281	50	79238	35, 1, Scaffold12735:108654-108724	plot strPur2
416	2009	strPur3	tbd	tbd	989	56	64991	96	187408	35, 1, Scaffold740:110486-110556	plot strPur3
417	2011	strPur4	GCF_000002235.3	Atlas v. WGS for Sanger Assembly, Atlas-Link and Atlas-GapFill for SOLiD and Illumina improvement	1612	100	326953	50	206009	425, 3, Scaffold112:361603-362455	plot strPur4
419	2014	strRat2	GCA_001040885.1	tbd	2	54.5	109	6	12	67, 1, chrUn_LN609483v1:243-377	plot strRat2
421	2009	susScr1	tbd	tbd	371	43	34151	100	66500	986, 100, chr2:139016697-139018768	plot susScr1
422	2009	susScr2	tbd	tbd	371	43	34151	100	66500	986, 100, chr2:139016697-139018768	plot susScr2
423	1880	taeGut0	tbd	tbd	212	45	20495	442	116920	624, 10, Contig233:50949-52206	plot taeGut0
424	2008	taeGut1	tbd	tbd	223	45	22373	100	22300	689, 100, chr21_random:54357-55834	plot taeGut1
425	2013	taeGut2	GCF_000151805.1	PCAP v. 2008	219	44	21273	100	21900	624, 100, chr27:56676-58023	plot taeGut2
427	2013	takFla1	GCA_000400755.1	HAPs v. 0.2.2	365	241	91817	788	407496	503, 1, KE121297:329-1335	plot takFla1
428	2013	tarIhg38	tbd	tbd	12	78	974	440	56689	125, 20, chrUn_KI270442v1:175618-175887	plot tarIhg38
429	2008	tarSyr1	tbd	tbd	331	70	45530	191	102767	892, 100, scaffold_111889:3660-5543	plot tarSyr1
430	2013	tarSyr2	GCF_000164805.1	Celera v. DEC-2012	189	56	17645	20	9572	1000, 20, KE939253v1:939796-941815	plot tarSyr2
431	2014	tauEry1	GCF_000709365.1	SOAPdenovo v. 1.6	1	50	50	394	394	50, 394, KL466072:20829-21322	plot tauEry1
432	2004	tetNig1	tbd	tbd	64	272.5	21868	1000	53904	336, 59, chr5:807217-807947	plot tetNig1
433	2007	tetNig2	tbd	tbd	70	298	25569	500	32404	336, 59, chr5:799217-799947	plot tetNig2
434	2014	tinGut1	GCF_000705375.1	SOAPdenovo v. 1.6	18	96	3855	1086	21982	519, 68, KL400865:236113-237218	plot tinGut1
435	2014	tinGut2	GCF_000705375.1	SOAPdenovo v. 1.6	18	96	3855	1086	21982	519, 68, KL895544:236113-237218	plot tinGut2
436	2005	triCas1	tbd	tbd	75	100	8201	50	6900	214, 50, Contig5855_Contig1469:226794-227271	plot triCas1
437	2005	triCas2	tbd	tbd	63	62	5442	50	313244	412, 50, chrUn_46:283716-284589	plot triCas2
438	2011	triMan1	GCF_000243295.1	AllPaths v. R38542	5748	75	527972	100	726640	1000, 100, JH594622:8537918-8540017	plot triMan1
439	2011	triSpi1	GCF_000181795.1	PCAP v. January 12, 2007	3	55	806	10	230	705, 10, GL622790v1:172202-173621	plot triSpi1
440	2014	triSui1	GCA_000701005.1	SOAPdenovo v. 2	37	138	7959	1449	82883	120, 68, KL363219v1:83933-84240	plot triSui1
442	2013	tupChi1	GCF_000334495.1	SOAPdenovo v. 1.05	914	220.5	290632	987.5	1823897	861, 16, KB320907:3306581-3308318	plot tupChi1
443	2008	turTru1	tbd	tbd	112	41.5	15556	388	52461	993, 100, scaffold_108458:6669-8754	plot turTru1
444	2011	turTru2	GCF_000151865.2	Atlas, Atlas-Link, Atlas-GapFill v. June 2011	5612	70	466776	188.5	1979352	44, 1, JH496197:2095-2183	plot turTru2
445	2014	tytAlb1	GCF_000687205.1	SOAPdenovo v. 1.6	2	170	340	326	652	289, 220, KK379918:2163-2960	plot tytAlb1
446	2014	ursMar1	GCF_000687225.1	SOAPdenovo v. 1.05	205	41	12130	3384	708704	711, 49, KK498595:3401141-3402611	plot ursMar1
447	2007	venter1	tbd	tbd	64	411.5	26995	100	64592	862, 20, chr2:102870978-102872721	plot venter1
448	2008	vicPac1	tbd	tbd	221	251	71912	276	310711	993, 100, scaffold_812:411693-413778	plot vicPac1
449	2013	vicPac2	GCF_000164845.1	Newbler v. May-2012	1245	69	115488	369	430947	685, 20, KB632527:971889-973278	plot vicPac2
450	1880	vicVic1	tbd	tbd	218	252.5	71401	263	309237	993, 100, scaffold_812:411693-413778	plot vicVic1
451	2016	xenLae2	GCF_001663975.1	Meraculous v. May-2013	2660	43	112843	265	1906995	50, 10, chr6S:105116072-105116181	plot xenLae2
452	2004	xenTro1	tbd	tbd	140	177.5	37717	889.5	437093	94, 1, scaffold_26179:153-341	plot xenTro1
453	2005	xenTro2	tbd	tbd	116	229.5	33928	806.5	320973	83, 1, scaffold_13788:6263-6429	plot xenTro2
454	2009	xenTro3	tbd	tbd	116	229.5	33928	806.5	320973	83, 1, GL185958:6263-6429	plot xenTro3
455	2012	xenTro7	GCF_000004195.2	ARACHNE v. 20071016_modified	98	82.5	16149	201	69741	775, 100, KB022861:7377-9026	plot xenTro7
456	2016	xenTro9	GCF_000004195.3	Meraculous v. May-2013	172	105.5	27368	100	99243	775, 100, chrUn_NW_016684502v1:7377-9026	plot xenTro9
457	2012	xipMac1	GCF_000241075.1	PCAP v. 3/30/09; Newbler v. MapAsmResearch-02/17/2010	548	50	32896	131	334271	30, 1, JH556915:15756-15816	plot xipMac1
459	2013	zonAlb1	GCF_000385455.1	Allpaths-LG v. Feb-2013	538	79	50834	1	134738	990, 1, KB913055:7474487-7476467	plot zonAlb1

assemblies with zero duplicate gap sequences

count	year	dbName	ncbiAsmId	number of gaps	assembly method
001	2012	aciBauTYTH_1	GCF_000302575.1	4	tbd
002	2006	afrOth13	tbd	220	tbd
003	2014	apaVit1	GCF_000703405.1	50921	SOAPdenovo v. 1.6
004	2006	borEut13	tbd	0	tbd
005	2014	bunEbo1	GCF_000889155.1	0	tbd
006	2010	caeJap3	tbd	0	tbd
007	2003	canFamPoodle1	GCA_000181415.1	0	tbd
008	2005	canHg12	tbd	0	tbd
009	2010	ce10	tbd	0	tbd
010	2013	ce11	GCF_000002985.6	0	tbd
011	2004	ce2	tbd	5	tbd
012	2005	ce3	tbd	0	tbd
013	2007	ce4	tbd	0	tbd
014	2007	ce5	tbd	0	tbd
015	2008	ce6	tbd	0	tbd
016	2009	ce7	tbd	0	tbd
017	2009	ce8	tbd	0	tbd
018	2010	ce9	tbd	0	tbd
019	2004	droMoj1	tbd	0	tbd
020	2014	eboVir1	tbd	2	tbd
021	2014	eboVir3	tbd	0	tbd
022	2006	euaGli13	tbd	19510	tbd
023	2006	eutHer13	tbd	304	tbd
024	1880	gasAsc0	GCA_000180675.1	0	tbd
025	2006	gliRes13	tbd	39623	tbd
026	2016	gorGor5	tbd	0	tbd
027	2006	homIni14	tbd	0	tbd
028	1880	homNea0	tbd	872	tbd
029	2006	lauRas13	tbd	31794	tbd
030	2014	marVir1	tbd	0	tbd
031	2008	melHap1	GCA_000172435.1	0	tbd
032	2008	melInc1	GCA_000180415.1	0	tbd
033	2006	otoGar1	tbd	0	tbd
034	2008	priPac2	GCA_000180635.1	59	tbd
035	2012	repBase0	tbd	2137	tbd
036	2012	repBase1	tbd	3623	tbd
037	1880	repBase2	tbd	3237	tbd
038	2014	resEbo1	GCF_000854085.1	0	tbd
039	2016	rouAeg1	GCF_001466805.2	638	SparseAssembler v. OCTOBER-2015; DBG2OLC v. OCTOBER-2015; LINKS v. 1.5.1; L_RNA_Scaffolder v. OCTOBER-2015; SSPACE v. 3.0
040	2003	sacCer1	tbd	0	tbd
041	2008	sacCer2	tbd	0	tbd
042	2011	sacCer3	GCF_000146045.2	0	tbd
043	1880	salMan0	tbd	0	tbd
044	2011	strRat1	tbd	3207	tbd
045	2014	sudEbo1	GCF_000855585.1	0	tbd
046	2014	taiEbo1	GCF_000888475.1	0	tbd
047	2006	tupBel1	tbd	0	tbd
048	2014	zaiEbo1	GCF_000848505.1	0	tbd

GapOverlap: Difference between revisions

Revision as of 05:46, 20 April 2017

Contents

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table features

gapOverlap table statistics

assemblies with zero duplicate gap sequences

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@@ Line 1: / Line 1: @@
-== bugs ==
-Need to add a column to indicate correspondence between UCSC db
-name and the NCBI assembly name.  That information is known, just
-need to add the column.
-Trying to add a column to indicate assembly software
-Also need to indicate assemblies that do not have this difficulty.
 == methods ==
 The measurements are taken from the gapOverlap.bed[.gz] file in
@@ Line 50: / Line 40: @@
 ! style='text-align:left;'| count
 ! year
-! dbName
+! style='text-align:center;'| dbName
+! style='text-align:center;'| ncbiAsmId
+! style='text-align:center;'| assembly method
 ! item
 count
@@ Line 69: / Line 61: @@
 | 001
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=WSB_EiJ GCA_001624835.1_WSB_EiJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=WSB_EiJ GCA_001624835.1_WSB_EiJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624835.1/ GCA_001624835.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 11455
 | style='text-align:right'| 236
@@ Line 81: / Line 75: @@
 | 002
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=A_J GCA_001624215.1_A_J_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=A_J GCA_001624215.1_A_J_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624215.1/ GCA_001624215.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 38843
 | style='text-align:right'| 80
@@ Line 93: / Line 89: @@
 | 003
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CBA_J GCA_001624475.1_CBA_J_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CBA_J GCA_001624475.1_CBA_J_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624475.1/ GCA_001624475.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 24180
 | style='text-align:right'| 279.5
@@ Line 105: / Line 103: @@
 | 004
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAROLI_EIJ GCA_900094665.1_CAROLI_EIJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAROLI_EIJ GCA_900094665.1_CAROLI_EIJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_900094665.1/ GCA_900094665.1]
+| tbd
 | style='text-align:right'| 6469
 | style='text-align:right'| 70
@@ Line 117: / Line 117: @@
 | 005
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=LP_J GCA_001632615.1_LP_J_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=LP_J GCA_001632615.1_LP_J_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632615.1/ GCA_001632615.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 18175
 | style='text-align:right'| 98
@@ Line 129: / Line 131: @@
 | 006
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=BALB_cJ GCA_001632525.1_BALB_cJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=BALB_cJ GCA_001632525.1_BALB_cJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632525.1/ GCA_001632525.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 15793
 | style='text-align:right'| 363
@@ Line 141: / Line 145: @@
 | 007
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PAHARI_EIJ GCA_900095145.1_PAHARI_EIJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PAHARI_EIJ GCA_900095145.1_PAHARI_EIJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_900095145.1/ GCA_900095145.1]
+| tbd
 | style='text-align:right'| 6365
 | style='text-align:right'| 69
@@ Line 153: / Line 159: @@
 | 008
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PWK_PhJ GCA_001624775.1_PWK_PhJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=PWK_PhJ GCA_001624775.1_PWK_PhJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624775.1/ GCA_001624775.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 246352
 | style='text-align:right'| 65
@@ Line 165: / Line 173: @@
 | 009
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=DBA_2J GCA_001624505.1_DBA_2J_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=DBA_2J GCA_001624505.1_DBA_2J_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624505.1/ GCA_001624505.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 13245
 | style='text-align:right'| 98
@@ Line 177: / Line 187: @@
 | 010
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NOD_ShiLtJ GCA_001624675.1_NOD_ShiLtJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NOD_ShiLtJ GCA_001624675.1_NOD_ShiLtJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624675.1/ GCA_001624675.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 36838
 | style='text-align:right'| 172
@@ Line 189: / Line 201: @@
 | 011
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=SPRET_EiJ GCA_001624865.1_SPRET_EiJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=SPRET_EiJ GCA_001624865.1_SPRET_EiJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624865.1/ GCA_001624865.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail genomics v. August-2015; Ragout v. 2.0b
 | style='text-align:right'| 17567
 | style='text-align:right'| 516
@@ Line 201: / Line 215: @@
 | 012
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NZO_HlLtJ GCA_001624745.1_NZO_HlLtJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=NZO_HlLtJ GCA_001624745.1_NZO_HlLtJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624745.1/ GCA_001624745.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 21209
 | style='text-align:right'| 448
@@ Line 213: / Line 229: @@
 | 013
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=129S1_SvImJ GCA_001624185.1_129S1_SvImJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=129S1_SvImJ GCA_001624185.1_129S1_SvImJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624185.1/ GCA_001624185.1]
+| SGA v. 0.9.19; Ragout v. 2.0b
 | style='text-align:right'| 20479
 | style='text-align:right'| 400
@@ Line 225: / Line 243: @@
 | 014
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C57BL_6NJ GCA_001632555.1_C57BL_6NJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C57BL_6NJ GCA_001632555.1_C57BL_6NJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632555.1/ GCA_001632555.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 24698
 | style='text-align:right'| 97
@@ Line 237: / Line 257: @@
 | 015
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=AKR_J GCA_001624295.1_AKR_J_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=AKR_J GCA_001624295.1_AKR_J_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624295.1/ GCA_001624295.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 18106
 | style='text-align:right'| 335
@@ Line 249: / Line 271: @@
 | 016
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAST_EiJ GCA_001624445.1_CAST_EiJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=CAST_EiJ GCA_001624445.1_CAST_EiJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624445.1/ GCA_001624445.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Dovetail Genomics v. August-2015; Ragout v. 2.0b
 | style='text-align:right'| 14714
 | style='text-align:right'| 324
@@ Line 261: / Line 285: @@
 | 017
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C3H_HeJ GCA_001632575.1_C3H_HeJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=C3H_HeJ GCA_001632575.1_C3H_HeJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001632575.1/ GCA_001632575.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 19436
 | style='text-align:right'| 307
@@ Line 273: / Line 299: @@
 | 018
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=FVB_NJ GCA_001624535.1_FVB_NJ_v1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgGateway?hubUrl=http://genome-test.cse.ucsc.edu/hubs/mouseStrains/hub.txt&genome=FVB_NJ GCA_001624535.1_FVB_NJ_v1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001624535.1/ GCA_001624535.1]
+| SGA v. 0.9.19; SOAP denovo2 v. r240; Ragout v. 2.0b
 | style='text-align:right'| 14811
 | style='text-align:right'| 355
@@ Line 285: / Line 313: @@
 | 019
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=CHM1 CHM1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000306695.2/ GCF_000306695.2]
+| SRPRISM v. 2.4.28-alpha; ARGO v. 0.1
 | style='text-align:right'| 85
 | style='text-align:right'| 86
@@ Line 297: / Line 327: @@
 | 020
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1 acaChl1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=acaChl1 acaChl1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000695815.1/ GCF_000695815.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 5
 | style='text-align:right'| 170
@@ Line 309: / Line 341: @@
 | 023
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ailMel1 ailMel1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000004335.2/ GCF_000004335.2]
+| tbd
 | style='text-align:right'| 48
 | style='text-align:right'| 104
@@ Line 321: / Line 355: @@
 | 024
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allMis1 allMis1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000281125.1/ GCF_000281125.1]
+| Allpaths v. R41313; manual scaffolding
 | style='text-align:right'| 1151
 | style='text-align:right'| 83
@@ Line 333: / Line 369: @@
 | 025
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=allSin1 allSin1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000455745.1/ GCF_000455745.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 95
 | style='text-align:right'| 125
@@ Line 345: / Line 383: @@
 | 026
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1 amaVit1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=amaVit1 amaVit1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000332375.1/ GCA_000332375.1]
+| Ray software v. 3
 | style='text-align:right'| 10099
 | style='text-align:right'| 81
@@ Line 357: / Line 397: @@
 | 027
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anaPla1 anaPla1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000355885.1/ GCF_000355885.1]
+| SOAPdenovo Release v. 1.03
 | style='text-align:right'| 31
 | style='text-align:right'| 251
@@ Line 369: / Line 411: @@
 | 028
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1 ancCey1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1 ancCey1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000688135.1/ GCA_000688135.1]
+| Velvet v. 1.2.05; BGI GapCloser v. 1.12 (release_2011); HaploMerger v. 20111230; ERANGE v. 3.2
 | style='text-align:right'| 805
 | style='text-align:right'| 154
@@ Line 381: / Line 425: @@
 | 029
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=angJap1 angJap1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=angJap1 angJap1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000470695.1/ GCA_000470695.1]
+| CLC NGS Cell v. 3.2; CLC NGS Cell v. 4.0beta
 | style='text-align:right'| 4539
 | style='text-align:right'| 91
@@ Line 393: / Line 439: @@
 | 030
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar1 anoCar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar1 anoCar1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 20
 | style='text-align:right'| 383.5
@@ Line 405: / Line 453: @@
 | 031
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoCar2 anoCar2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000090745.1/ GCF_000090745.1]
+| Arachne v. 3.0.0
 | style='text-align:right'| 25
 | style='text-align:right'| 240
@@ Line 417: / Line 467: @@
 | 032
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoGam1 anoGam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=anoGam1 anoGam1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 7
 | style='text-align:right'| 528
@@ Line 429: / Line 481: @@
 | 033
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1 apaSpi1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaSpi1 apaSpi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000385615.1/ GCA_000385615.1]
+| SOAPdenovo v. 1.0.5
 | style='text-align:right'| 607
 | style='text-align:right'| 61
@@ Line 441: / Line 495: @@
 | 035
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel1 apiMel1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel1 apiMel1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 216
 | style='text-align:right'| 50
@@ Line 453: / Line 509: @@
 | 036
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel2 apiMel2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel2 apiMel2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 133
 | style='text-align:right'| 50
@@ Line 465: / Line 523: @@
 | 037
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel3 apiMel3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel3 apiMel3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 199
 | style='text-align:right'| 62
@@ Line 477: / Line 537: @@
 | 038
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apiMel4 apiMel4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002195.4/ GCF_000002195.4]
+| Atlas assembly system v. before 2011
 | style='text-align:right'| 226
 | style='text-align:right'| 52.5
@@ Line 489: / Line 551: @@
 | 039
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aplCal1 aplCal1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aplCal1 aplCal1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 25
 | style='text-align:right'| 77
@@ Line 501: / Line 565: @@
 | 040
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptFor1 aptFor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000699145.1/ GCF_000699145.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 109
 | style='text-align:right'| 147
@@ Line 513: / Line 579: @@
 | 041
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptMan1 aptMan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aptMan1 aptMan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_001039765.1/ GCF_001039765.1]
+| tbd
 | style='text-align:right'| 15742
 | style='text-align:right'| 124
@@ Line 525: / Line 593: @@
 | 042
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr1 aquChr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr1 aquChr1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000696035.1/ GCA_000696035.1]
+| ABySS v. 1.3.6
 | style='text-align:right'| 4592
 | style='text-align:right'| 43
@@ Line 537: / Line 607: @@
 | 043
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2 aquChr2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aquChr2 aquChr2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000766835.1/ GCA_000766835.1]
+| AllPaths-LG v. August 2013
 | style='text-align:right'| 326
 | style='text-align:right'| 82.5
@@ Line 549: / Line 621: @@
 | 044
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1 araMac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=araMac1 araMac1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000400695.1/ GCA_000400695.1]
+| CLC Genomics Workbench v. 4.9
 | style='text-align:right'| 120
 | style='text-align:right'| 48.5
@@ Line 561: / Line 635: @@
 | 045
 | 1880
-| araTha1
+| style='text-align:center;'| araTha1
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001735.3/ GCF_000001735.3]
+| tbd
 | style='text-align:right'| 1
 | style='text-align:right'| 289
@@ Line 573: / Line 649: @@
 | 046
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1 ascSuu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1 ascSuu1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000298755.1/ GCA_000298755.1]
+| SOAPdenovo v. 1.04
 | style='text-align:right'| 9
 | style='text-align:right'| 404
@@ Line 585: / Line 663: @@
 | 047
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=astMex1 astMex1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000372685.1/ GCF_000372685.1]
+| AllPathsLG v. Jan-2013
 | style='text-align:right'| 1385
 | style='text-align:right'| 78
@@ Line 597: / Line 677: @@
 | 048
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balAcu1 balAcu1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000493695.1/ GCF_000493695.1]
+| SOAPdenovo v. 16-Mar-2012
 | style='text-align:right'| 211
 | style='text-align:right'| 149
@@ Line 609: / Line 691: @@
 | 049
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balPav1 balPav1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=balPav1 balPav1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000709895.1/ GCA_000709895.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 5
 | style='text-align:right'| 270
@@ Line 621: / Line 705: @@
 | 050
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1 bisBis1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bisBis1 bisBis1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000754665.1/ GCA_000754665.1]
+| MaSuRCA v. 2.1.0
 | style='text-align:right'| 8184
 | style='text-align:right'| 72
@@ Line 633: / Line 719: @@
 | 052
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1 bosMut1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosMut1 bosMut1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000298355.1/ GCA_000298355.1]
+| SOAPdenovo v. 1.14
 | style='text-align:right'| 139
 | style='text-align:right'| 83
@@ Line 645: / Line 733: @@
 | 053
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau1 bosTau1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau1 bosTau1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 6550
 | style='text-align:right'| 40
@@ Line 657: / Line 747: @@
 | 054
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau2 bosTau2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau2 bosTau2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 4361
 | style='text-align:right'| 105
@@ Line 669: / Line 761: @@
 | 055
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau3 bosTau3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau3 bosTau3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 411
 | style='text-align:right'| 51
@@ Line 681: / Line 775: @@
 | 056
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau4 bosTau4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau4 bosTau4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 437
 | style='text-align:right'| 53
@@ Line 693: / Line 789: @@
 | 057
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau5 bosTau5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau5 bosTau5]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 435
 | style='text-align:right'| 53
@@ Line 705: / Line 803: @@
 | 058
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 bosTau6]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau6 bosTau6]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.5/ GCF_000003055.5]
+| UMD Overlapper v. 2009; additional processing
 | style='text-align:right'| 789
 | style='text-align:right'| 670
@@ Line 717: / Line 817: @@
 | 059
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 bosTau7]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau7 bosTau7]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 413
 | style='text-align:right'| 55
@@ Line 729: / Line 831: @@
 | 060
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTau8 bosTau8]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.5/ GCF_000003055.5]
+| UMD Overlapper v. 2009; additional processing
 | style='text-align:right'| 789
 | style='text-align:right'| 670
@@ Line 741: / Line 845: @@
 | 061
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTauMd3 bosTauMd3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bosTauMd3 bosTauMd3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 789
 | style='text-align:right'| 670
@@ Line 753: / Line 859: @@
 | 062
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo1 braFlo1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo1 braFlo1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 31
 | style='text-align:right'| 484
@@ Line 765: / Line 873: @@
 | 063
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo2 braFlo2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=braFlo2 braFlo2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 22
 | style='text-align:right'| 439
@@ Line 777: / Line 887: @@
 | 064
 | 1880
-| braRap1
+| style='text-align:center;'| braRap1
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000309985.1/ GCF_000309985.1]
+| SOAPdenovo v. 1.04
 | style='text-align:right'| 12
 | style='text-align:right'| 104
@@ Line 789: / Line 901: @@
 | 065
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal1 bruMal1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal1 bruMal1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 55
 | style='text-align:right'| 50
@@ Line 801: / Line 915: @@
 | 066
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2 bruMal2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2 bruMal2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 46
 | style='text-align:right'| 124.5
@@ Line 813: / Line 929: @@
 | 067
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bubBub1 bubBub1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bubBub1 bubBub1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000471725.1/ GCF_000471725.1]
+| MaSuRCA v. 1.8.3
 | style='text-align:right'| 2383
 | style='text-align:right'| 163
@@ Line 825: / Line 943: @@
 | 068
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bucRhi1 bucRhi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000710305.1/ GCF_000710305.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 31
 | style='text-align:right'| 114
@@ Line 837: / Line 957: @@
 | 070
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1 burXyl1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1 burXyl1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 65
 | style='text-align:right'| 601
@@ Line 849: / Line 971: @@
 | 071
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng1 caeAng1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng1 caeAng1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000165025.1/ GCA_000165025.1]
+| Velvet v. 0.7.56
 | style='text-align:right'| 414
 | style='text-align:right'| 41
@@ Line 861: / Line 985: @@
 | 072
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2 caeAng2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2 caeAng2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 461
 | style='text-align:right'| 46
@@ Line 873: / Line 999: @@
 | 073
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap1 caeJap1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap1 caeJap1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 135
 | style='text-align:right'| 58
@@ Line 885: / Line 1,013: @@
 | 074
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2 caeJap2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap2 caeJap2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 765
 | style='text-align:right'| 103
@@ Line 897: / Line 1,027: @@
 | 075
 | 1880
-| caeJap2a
+| style='text-align:center;'| caeJap2a
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 764
 | style='text-align:right'| 103
@@ Line 909: / Line 1,041: @@
 | 077
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4 caeJap4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4 caeJap4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000147155.1/ GCA_000147155.1]
+| Celera assembler v. 6.0
 | style='text-align:right'| 16
 | style='text-align:right'| 98.5
@@ Line 921: / Line 1,055: @@
 | 078
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb1 caePb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb1 caePb1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 115
 | style='text-align:right'| 44
@@ Line 933: / Line 1,069: @@
 | 079
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb2 caePb2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb2 caePb2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 83
 | style='text-align:right'| 37
@@ Line 945: / Line 1,083: @@
 | 080
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3 caePb3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3 caePb3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000143925.2/ GCA_000143925.2]
+| PCAP v. 9/3/04
 | style='text-align:right'| 89
 | style='text-align:right'| 37
@@ Line 957: / Line 1,097: @@
 | 081
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem1 caeRem1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem1 caeRem1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 58
 | style='text-align:right'| 96
@@ Line 969: / Line 1,111: @@
 | 082
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem2 caeRem2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem2 caeRem2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 58
 | style='text-align:right'| 96
@@ Line 981: / Line 1,125: @@
 | 083
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem3 caeRem3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem3 caeRem3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 46
 | style='text-align:right'| 50
@@ Line 993: / Line 1,139: @@
 | 084
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeRem4 caeRem4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000149515.1/ GCF_000149515.1]
+| tbd
 | style='text-align:right'| 46
 | style='text-align:right'| 50
@@ Line 1,005: / Line 1,153: @@
 | 085
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111 caeSp111]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111 caeSp111]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000186765.1/ GCA_000186765.1]
+| Celera assembler v. 6.0
 | style='text-align:right'| 4
 | style='text-align:right'| 194.5
@@ Line 1,017: / Line 1,167: @@
 | 086
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51 caeSp51]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51 caeSp51]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 14
 | style='text-align:right'| 34
@@ Line 1,029: / Line 1,181: @@
 | 087
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp71 caeSp71]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp71 caeSp71]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 535
 | style='text-align:right'| 47
@@ Line 1,041: / Line 1,195: @@
 | 088
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp91 caeSp91]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp91 caeSp91]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 26
 | style='text-align:right'| 217.5
@@ Line 1,053: / Line 1,209: @@
 | 089
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calAnn1 calAnn1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000699085.1/ GCF_000699085.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 89
 | style='text-align:right'| 127
@@ Line 1,065: / Line 1,223: @@
 | 090
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac1 calJac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac1 calJac1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1597
 | style='text-align:right'| 42
@@ Line 1,077: / Line 1,237: @@
 | 091
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calJac3 calJac3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000004665.1/ GCF_000004665.1]
+| PCAP v. 2009
 | style='text-align:right'| 1516
 | style='text-align:right'| 43
@@ Line 1,089: / Line 1,251: @@
 | 092
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=calMil1 calMil1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000165045.1/ GCF_000165045.1]
+| Celera v. 6.1
 | style='text-align:right'| 31
 | style='text-align:right'| 123
@@ Line 1,101: / Line 1,265: @@
 | 093
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1 camFer1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=camFer1 camFer1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000311805.1/ GCF_000311805.1]
+| SOAPdenovo v. V1.05
 | style='text-align:right'| 11
 | style='text-align:right'| 205
@@ Line 1,113: / Line 1,279: @@
 | 094
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam1 canFam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam1 canFam1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 12
 | style='text-align:right'| 153
@@ Line 1,125: / Line 1,293: @@
 | 095
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam2 canFam2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam2 canFam2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 32
 | style='text-align:right'| 199.5
@@ Line 1,137: / Line 1,307: @@
 | 096
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFam3 canFam3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ GCF_000002285.3]
+| Arachne v. April 2010
 | style='text-align:right'| 34
 | style='text-align:right'| 175.5
@@ Line 1,149: / Line 1,321: @@
 | 099
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capCar1 capCar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000700745.1/ GCF_000700745.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 4
 | style='text-align:right'| 105
@@ Line 1,161: / Line 1,335: @@
 | 100
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1 capHir1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=capHir1 capHir1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000317765.1/ GCF_000317765.1]
+| SOAPdenovo v. 1.03
 | style='text-align:right'| 627
 | style='text-align:right'| 41
@@ Line 1,173: / Line 1,349: @@
 | 101
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=carCri1 carCri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690535.1/ GCF_000690535.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 4
 | style='text-align:right'| 161
@@ Line 1,185: / Line 1,363: @@
 | 102
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor2 cavPor2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor2 cavPor2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 393
 | style='text-align:right'| 427
@@ Line 1,197: / Line 1,377: @@
 | 103
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cavPor3 cavPor3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000151735.1/ GCF_000151735.1]
+| unknown v. before 2008
 | style='text-align:right'| 3
 | style='text-align:right'| 145
@@ Line 1,209: / Line 1,391: @@
 | 104
 | 2002
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb1 cb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb1 cb1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 81
 | style='text-align:right'| 163
@@ Line 1,221: / Line 1,405: @@
 | 105
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb2 cb2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb2 cb2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 86
 | style='text-align:right'| 153
@@ Line 1,233: / Line 1,419: @@
 | 106
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb3 cb3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb3 cb3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 80
 | style='text-align:right'| 148.5
@@ Line 1,245: / Line 1,433: @@
 | 107
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb4 cb4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cb4 cb4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 86
 | style='text-align:right'| 153
@@ Line 1,257: / Line 1,447: @@
 | 118
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cerSim1 cerSim1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000283155.1/ GCF_000283155.1]
+| ALLPATHS v. R41370
 | style='text-align:right'| 1818
 | style='text-align:right'| 68
@@ Line 1,269: / Line 1,461: @@
 | 119
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc1 chaVoc1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc1 chaVoc1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000708025.1/ GCF_000708025.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 47
 | style='text-align:right'| 200
@@ Line 1,281: / Line 1,475: @@
 | 120
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chaVoc2 chaVoc2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000708025.1/ GCF_000708025.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 47
 | style='text-align:right'| 200
@@ Line 1,293: / Line 1,489: @@
 | 121
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cheMyd1 cheMyd1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000344595.1/ GCF_000344595.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 129
 | style='text-align:right'| 204
@@ Line 1,305: / Line 1,503: @@
 | 122
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chiLan1 chiLan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000276665.1/ GCA_000276665.1]
+| ALLPATHS v. R40776
 | style='text-align:right'| 1183
 | style='text-align:right'| 70
@@ Line 1,317: / Line 1,517: @@
 | 123
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab1 chlSab1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab1 chlSab1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 23634
 | style='text-align:right'| 81
@@ Line 1,329: / Line 1,531: @@
 | 124
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2 chlSab2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlSab2 chlSab2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000409795.2/ GCF_000409795.2]
+| ALLPATHS and Newbler v. 13-Feb-2013
 | style='text-align:right'| 23631
 | style='text-align:right'| 81
@@ Line 1,341: / Line 1,545: @@
 | 125
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chlUnd1 chlUnd1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000695195.1/ GCF_000695195.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 5
 | style='text-align:right'| 293
@@ Line 1,353: / Line 1,559: @@
 | 126
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1 choHof1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=choHof1 choHof1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000164785.1/ GCA_000164785.1]
+| tbd
 | style='text-align:right'| 104
 | style='text-align:right'| 54.5
@@ Line 1,365: / Line 1,573: @@
 | 127
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1 chrAsi1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrAsi1 chrAsi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000296735.1/ GCF_000296735.1]
+| allpaths v. R42316 HAPLOIDIFY=True
 | style='text-align:right'| 3416
 | style='text-align:right'| 76
@@ Line 1,377: / Line 1,587: @@
 | 128
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic1 chrPic1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic1 chrPic1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 7555
 | style='text-align:right'| 79
@@ Line 1,389: / Line 1,601: @@
 | 129
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=chrPic2 chrPic2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000241765.2/ GCA_000241765.2]
+| Newbler v. 2.6
 | style='text-align:right'| 6315
 | style='text-align:right'| 77
@@ Line 1,401: / Line 1,615: @@
 | 130
 | 2002
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1 ci1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci1 ci1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000183065.1/ GCA_000183065.1]
+| tbd
 | style='text-align:right'| 28
 | style='text-align:right'| 311.5
@@ Line 1,413: / Line 1,629: @@
 | 131
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci2 ci2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci2 ci2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 2
 | style='text-align:right'| 472.5
@@ Line 1,425: / Line 1,643: @@
 | 132
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ci3 ci3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000224145.1/ GCF_000224145.1]
+| tbd
 | style='text-align:right'| 22
 | style='text-align:right'| 258.5
@@ Line 1,437: / Line 1,657: @@
 | 133
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav1 cioSav1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav1 cioSav1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 8
 | style='text-align:right'| 124
@@ Line 1,449: / Line 1,671: @@
 | 134
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav2 cioSav2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cioSav2 cioSav2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 6
 | style='text-align:right'| 402.5
@@ Line 1,461: / Line 1,685: @@
 | 135
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colAng1 colAng1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000951035.1/ GCF_000951035.1]
+| AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2
 | style='text-align:right'| 5690
 | style='text-align:right'| 77
@@ Line 1,473: / Line 1,699: @@
 | 136
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colLiv1 colLiv1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000337935.1/ GCF_000337935.1]
+| SOAPdenovo v. 2.0
 | style='text-align:right'| 19
 | style='text-align:right'| 116
@@ Line 1,485: / Line 1,713: @@
 | 137
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=colStr1 colStr1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690715.1/ GCF_000690715.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 5
 | style='text-align:right'| 161
@@ Line 1,497: / Line 1,727: @@
 | 138
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=conCri1 conCri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000260355.1/ GCF_000260355.1]
+| AllPaths v. 2012
 | style='text-align:right'| 1110
 | style='text-align:right'| 72
@@ Line 1,509: / Line 1,741: @@
 | 139
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corBra1 corBra1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000691975.1/ GCF_000691975.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 41
 | style='text-align:right'| 90
@@ Line 1,521: / Line 1,755: @@
 | 140
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=corCor1 corCor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000738735.1/ GCF_000738735.1]
+| AllPaths v. Allpaths-LG version 41687
 | style='text-align:right'| 21
 | style='text-align:right'| 81
@@ Line 1,533: / Line 1,769: @@
 | 141
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cotJap1 cotJap1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cotJap1 cotJap1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000511605.1/ GCA_000511605.1]
+| Soapdenovo v. 1.0.5b; bwa v. 0.5.9; SSPACE v. 1.2
 | style='text-align:right'| 1122
 | style='text-align:right'| 33
@@ Line 1,545: / Line 1,783: @@
 | 142
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGri1 criGri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000419365.1/ GCF_000419365.1]
+| SOAPdenovo v. 2.2
 | style='text-align:right'| 588
 | style='text-align:right'| 217
@@ Line 1,557: / Line 1,797: @@
 | 143
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGriChoV1 criGriChoV1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=criGriChoV1 criGriChoV1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000223135.1/ GCF_000223135.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 213
 | style='text-align:right'| 162
@@ Line 1,569: / Line 1,811: @@
 | 144
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cucCan1 cucCan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000709325.1/ GCF_000709325.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 113
 | style='text-align:right'| 242
@@ Line 1,581: / Line 1,825: @@
 | 145
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cynSem1 cynSem1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000523025.1/ GCF_000523025.1]
+| SOAPdenovo v. April-2011
 | style='text-align:right'| 78
 | style='text-align:right'| 311.5
@@ Line 1,593: / Line 1,839: @@
 | 146
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=cypVar1 cypVar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000732505.1/ GCA_000732505.1]
+| AllPaths v. May 2014
 | style='text-align:right'| 3240
 | style='text-align:right'| 89
@@ Line 1,605: / Line 1,853: @@
 | 147
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer1 danRer1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer1 danRer1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1280
 | style='text-align:right'| 57
@@ Line 1,617: / Line 1,867: @@
 | 148
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer10 danRer10]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002035.5/ GCF_000002035.5]
+| tbd
 | style='text-align:right'| 575
 | style='text-align:right'| 174
@@ Line 1,629: / Line 1,881: @@
 | 149
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer2 danRer2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer2 danRer2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1150
 | style='text-align:right'| 58
@@ Line 1,641: / Line 1,895: @@
 | 150
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer3 danRer3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer3 danRer3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 819
 | style='text-align:right'| 58
@@ Line 1,653: / Line 1,909: @@
 | 151
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer4 danRer4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer4 danRer4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 726
 | style='text-align:right'| 65.5
@@ Line 1,665: / Line 1,923: @@
 | 152
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer5 danRer5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer5 danRer5]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1559
 | style='text-align:right'| 170
@@ Line 1,677: / Line 1,937: @@
 | 153
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer6 danRer6]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer6 danRer6]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1421
 | style='text-align:right'| 133
@@ Line 1,689: / Line 1,951: @@
 | 154
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=danRer7 danRer7]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002035.4/ GCF_000002035.4]
+| tbd
 | style='text-align:right'| 1245
 | style='text-align:right'| 164
@@ Line 1,701: / Line 1,965: @@
 | 155
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov1 dasNov1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov1 dasNov1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 55
 | style='text-align:right'| 123
@@ Line 1,713: / Line 1,979: @@
 | 156
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov2 dasNov2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov2 dasNov2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 109
 | style='text-align:right'| 136
@@ Line 1,725: / Line 1,993: @@
 | 157
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dasNov3 dasNov3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000208655.1/ GCF_000208655.1]
+| Celera Assembler v. 6.0; Atlas-Link; Atlas-Gap-Fill
 | style='text-align:right'| 239
 | style='text-align:right'| 46
@@ Line 1,737: / Line 2,007: @@
 | 158
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1 dicLab1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dicLab1 dicLab1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000689215.1/ GCA_000689215.1]
+| tbd
 | style='text-align:right'| 275
 | style='text-align:right'| 423
@@ Line 1,749: / Line 2,021: @@
 | 159
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1 dipOrd1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dipOrd1 dipOrd1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000151885.1/ GCA_000151885.1]
+| tbd
 | style='text-align:right'| 219
 | style='text-align:right'| 46
@@ Line 1,761: / Line 2,035: @@
 | 160
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1 dirImm1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1 dirImm1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 505
 | style='text-align:right'| 175
@@ Line 1,773: / Line 2,049: @@
 | 161
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm1 dm1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm1 dm1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 9
 | style='text-align:right'| 252
@@ Line 1,785: / Line 2,063: @@
 | 162
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm2 dm2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm2 dm2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 8
 | style='text-align:right'| 362
@@ Line 1,797: / Line 2,077: @@
 | 163
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm3 dm3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm3 dm3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 20
 | style='text-align:right'| 286
@@ Line 1,809: / Line 2,091: @@
 | 164
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dm6 dm6]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001215.4/ GCF_000001215.4]
+| tbd
 | style='text-align:right'| 15
 | style='text-align:right'| 333
@@ Line 1,821: / Line 2,105: @@
 | 165
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp2 dp2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp2 dp2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 113
 | style='text-align:right'| 64
@@ Line 1,833: / Line 2,119: @@
 | 166
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp3 dp3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp3 dp3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 136
 | style='text-align:right'| 79.5
@@ Line 1,845: / Line 2,133: @@
 | 167
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp4 dp4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dp4 dp4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 183
 | style='text-align:right'| 81
@@ Line 1,857: / Line 2,147: @@
 | 168
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1 droAlb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAlb1 droAlb1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000298335.1/ GCA_000298335.1]
+| SOAPdenovo v. 1.04
 | style='text-align:right'| 4360
 | style='text-align:right'| 30
@@ Line 1,869: / Line 2,161: @@
 | 169
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna1 droAna1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna1 droAna1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 103
 | style='text-align:right'| 252
@@ Line 1,881: / Line 2,175: @@
 | 170
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna2 droAna2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna2 droAna2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 32
 | style='text-align:right'| 160
@@ Line 1,893: / Line 2,189: @@
 | 171
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droAna3 droAna3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005115.1/ GCF_000005115.1]
+| tbd
 | style='text-align:right'| 35
 | style='text-align:right'| 143
@@ Line 1,905: / Line 2,203: @@
 | 172
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBia2 droBia2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000233415.2/ GCA_000233415.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 14
 | style='text-align:right'| 116.5
@@ Line 1,917: / Line 2,217: @@
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 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droBip2 droBip2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000236285.2/ GCA_000236285.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_calland_upgrade.pl v. 1.0
 | style='text-align:right'| 26
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-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEle2 droEle2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000224195.2/ GCA_000224195.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATKv. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 22
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 | 175
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre1 droEre1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre1 droEre1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 8
 | style='text-align:right'| 86.5
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 | 176
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEre2 droEre2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005135.1/ GCF_000005135.1]
+| tbd
 | style='text-align:right'| 14
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 | 177
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-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droEug2 droEug2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000236325.2/ GCA_000236325.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 17
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-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droFic2 droFic2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000220665.2/ GCA_000220665.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 11
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@@ Line 1,989: / Line 2,301: @@
 | 179
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-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri1 droGri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri1 droGri1]
+| style='text-align:center;'| tbd
+| tbd
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@@ Line 2,001: / Line 2,315: @@
 | 180
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droGri2 droGri2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005155.2/ GCF_000005155.2]
+| tbd
 | style='text-align:right'| 48
 | style='text-align:right'| 60.5
@@ Line 2,013: / Line 2,329: @@
 | 181
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droKik2 droKik2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000224215.2/ GCA_000224215.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 12
 | style='text-align:right'| 102
@@ Line 2,025: / Line 2,343: @@
 | 182
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMir2 droMir2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000269505.2/ GCA_000269505.2]
+| Newbler v. 2.6
 | style='text-align:right'| 122
 | style='text-align:right'| 72
@@ Line 2,037: / Line 2,357: @@
 | 184
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj2 droMoj2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj2 droMoj2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 22
 | style='text-align:right'| 219.5
@@ Line 2,049: / Line 2,371: @@
 | 185
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj3 droMoj3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005175.2/ GCF_000005175.2]
+| tbd
 | style='text-align:right'| 16
 | style='text-align:right'| 343
@@ Line 2,061: / Line 2,385: @@
 | 186
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPer1 droPer1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005195.2/ GCF_000005195.2]
+| tbd
 | style='text-align:right'| 28
 | style='text-align:right'| 402
@@ Line 2,073: / Line 2,399: @@
 | 187
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPse3 droPse3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droPse3 droPse3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001765.3/ GCF_000001765.3]
+| PBJelly v. 12.8.2; Atlas genome assembly
 | style='text-align:right'| 12
 | style='text-align:right'| 51
@@ Line 2,085: / Line 2,413: @@
 | 188
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droRho2 droRho2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000236305.2/ GCA_000236305.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 35
 | style='text-align:right'| 167
@@ Line 2,097: / Line 2,427: @@
 | 189
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1 droSec1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSec1 droSec1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000005215.1/ GCA_000005215.1]
+| tbd
 | style='text-align:right'| 17
 | style='text-align:right'| 399
@@ Line 2,109: / Line 2,441: @@
 | 190
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim1 droSim1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim1 droSim1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 109
 | style='text-align:right'| 106
@@ Line 2,121: / Line 2,455: @@
 | 191
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim2 droSim2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSim2 droSim2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000754195.2/ GCF_000754195.2]
+| Velvet v. 1.1.04
 | style='text-align:right'| 104
 | style='text-align:right'| 58
@@ Line 2,133: / Line 2,469: @@
 | 192
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droSuz1 droSuz1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000472105.1/ GCA_000472105.1]
+| SOAPdenovo v. 2
 | style='text-align:right'| 71
 | style='text-align:right'| 185
@@ Line 2,145: / Line 2,483: @@
 | 193
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droTak2 droTak2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000224235.2/ GCA_000224235.2]
+| Celera Assembler v. 6.1; BWA v. 0.6.0; Samtools v. 0.1.14; GATK v. 1.1-9; Indel_call_and_upgrade.pl v. 1.0
 | style='text-align:right'| 13
 | style='text-align:right'| 102
@@ Line 2,157: / Line 2,497: @@
 | 194
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir1 droVir1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir1 droVir1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 48
 | style='text-align:right'| 328.5
@@ Line 2,169: / Line 2,511: @@
 | 195
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir2 droVir2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir2 droVir2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 13
 | style='text-align:right'| 232
@@ Line 2,181: / Line 2,525: @@
 | 196
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droVir3 droVir3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005245.1/ GCF_000005245.1]
+| tbd
 | style='text-align:right'| 12
 | style='text-align:right'| 341
@@ Line 2,193: / Line 2,539: @@
 | 197
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil1 droWil1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil1 droWil1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005925.1/ GCF_000005925.1]
+| tbd
 | style='text-align:right'| 23
 | style='text-align:right'| 248
@@ Line 2,205: / Line 2,553: @@
 | 198
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droWil2 droWil2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005925.1/ GCF_000005925.1]
+| tbd
 | style='text-align:right'| 23
 | style='text-align:right'| 248
@@ Line 2,217: / Line 2,567: @@
 | 199
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak1 droYak1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak1 droYak1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 65
 | style='text-align:right'| 340
@@ Line 2,229: / Line 2,581: @@
 | 200
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak2 droYak2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak2 droYak2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 99
 | style='text-align:right'| 170
@@ Line 2,241: / Line 2,595: @@
 | 201
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droYak3 droYak3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000005975.2/ GCF_000005975.2]
+| tbd
 | style='text-align:right'| 85
 | style='text-align:right'| 143
@@ Line 2,251: / Line 2,607: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=droYak3 plot droYak3]
 |-
-| 205
+| 204
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel1 echTel1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel1 echTel1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 89
 | style='text-align:right'| 83
@@ Line 2,263: / Line 2,621: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=echTel1 plot echTel1]
 |-
-| 206
+| 205
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=echTel2 echTel2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000313985.1/ GCF_000313985.1]
+| ALLPATHS v. R37599
 | style='text-align:right'| 3871
 | style='text-align:right'| 93
@@ Line 2,275: / Line 2,635: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=echTel2 plot echTel2]
 |-
-| 207
+| 206
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=egrGar1 egrGar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000687185.1/ GCF_000687185.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 112
 | style='text-align:right'| 213.5
@@ Line 2,287: / Line 2,649: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=egrGar1 plot egrGar1]
 |-
-| 208
+| 207
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1 eidHel1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eidHel1 eidHel1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000465285.1/ GCA_000465285.1]
+| CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05
 | style='text-align:right'| 27
 | style='text-align:right'| 45
@@ Line 2,299: / Line 2,663: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eidHel1 plot eidHel1]
 |-
-| 209
+| 208
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1 eleEdw1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eleEdw1 eleEdw1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000299155.1/ GCF_000299155.1]
+| allpaths v. R42301 HAPLOIDIFY=True
 | style='text-align:right'| 1643
 | style='text-align:right'| 71
@@ Line 2,311: / Line 2,677: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eleEdw1 plot eleEdw1]
 |-
-| 210
+| 209
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eptFus1 eptFus1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000308155.1/ GCF_000308155.1]
+| ALLPATHS v. R40371
 | style='text-align:right'| 1641
 | style='text-align:right'| 75
@@ Line 2,323: / Line 2,691: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eptFus1 plot eptFus1]
 |-
-| 211
+| 210
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab1 equCab1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab1 equCab1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 17
 | style='text-align:right'| 457
@@ Line 2,335: / Line 2,705: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=equCab1 plot equCab1]
 |-
-| 212
+| 211
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equCab2 equCab2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 4
 | style='text-align:right'| 160.5
@@ Line 2,347: / Line 2,719: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=equCab2 plot equCab2]
 |-
-| 213
+| 212
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=equPrz1 equPrz1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000696695.1/ GCA_000696695.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 39
 | style='text-align:right'| 49
@@ Line 2,359: / Line 2,733: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=equPrz1 plot equPrz1]
 |-
-| 214
+| 213
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur1 eriEur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur1 eriEur1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 343
 | style='text-align:right'| 435
@@ Line 2,371: / Line 2,747: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eriEur1 plot eriEur1]
 |-
-| 215
+| 214
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eriEur2 eriEur2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000296755.1/ GCF_000296755.1]
+| allpaths v. R41008
 | style='text-align:right'| 3596
 | style='text-align:right'| 70
@@ Line 2,383: / Line 2,761: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eriEur2 plot eriEur2]
 |-
-| 216
+| 215
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=esoLuc1 esoLuc1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000721915.1/ GCA_000721915.1]
+| AllPaths v. 43500
 | style='text-align:right'| 9785
 | style='text-align:right'| 81
@@ Line 2,395: / Line 2,775: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=esoLuc1 plot esoLuc1]
 |-
-| 218
+| 217
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eurHel1 eurHel1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690775.1/ GCF_000690775.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 2
 | style='text-align:right'| 89.5
@@ Line 2,407: / Line 2,789: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=eurHel1 plot eurHel1]
 |-
-| 220
+| 219
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falChe1 falChe1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000337975.1/ GCF_000337975.1]
+| SOAPdenovo v. 1.4
 | style='text-align:right'| 27
 | style='text-align:right'| 206
@@ Line 2,419: / Line 2,803: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=falChe1 plot falChe1]
 |-
-| 221
+| 220
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=falPer1 falPer1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000337955.1/ GCF_000337955.1]
+| SOAPdenovo v. 1.4
 | style='text-align:right'| 6
 | style='text-align:right'| 48.5
@@ Line 2,431: / Line 2,817: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=falPer1 plot falPer1]
 |-
-| 222
+| 221
 | 1880
-| felCat1
+| style='text-align:center;'| felCat1
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1343
 | style='text-align:right'| 353
@@ Line 2,443: / Line 2,831: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=felCat1 plot felCat1]
 |-
-| 223
+| 222
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat3 felCat3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat3 felCat3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1343
 | style='text-align:right'| 353
@@ Line 2,455: / Line 2,845: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=felCat3 plot felCat3]
 |-
-| 224
+| 223
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat4 felCat4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat4 felCat4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000003115.1/ GCA_000003115.1]
+| tbd
 | style='text-align:right'| 9736
 | style='text-align:right'| 503
@@ Line 2,467: / Line 2,859: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=felCat4 plot felCat4]
 |-
-| 225
+| 224
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat5 felCat5]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.1/ GCF_000181335.1]
+| Celera Assembler v. 6.1
 | style='text-align:right'| 27
 | style='text-align:right'| 72
@@ Line 2,479: / Line 2,873: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=felCat5 plot felCat5]
 |-
-| 226
+| 225
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=felCat8 felCat8]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181335.2/ GCF_000181335.2]
+| CABOG v. 6.2;  MaSuRCA assembler v. 8.0; GAA v. 1.0
 | style='text-align:right'| 630
 | style='text-align:right'| 55
@@ Line 2,491: / Line 2,887: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=felCat8 plot felCat8]
 |-
-| 227
+| 226
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ficAlb2 ficAlb2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000247815.1/ GCF_000247815.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 632
 | style='text-align:right'| 77
@@ Line 2,503: / Line 2,901: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ficAlb2 plot ficAlb2]
 |-
-| 228
+| 227
 | 2002
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr1 fr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr1 fr1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 76
 | style='text-align:right'| 155.5
@@ Line 2,515: / Line 2,915: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=fr1 plot fr1]
 |-
-| 229
+| 228
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr2 fr2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr2 fr2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 5
 | style='text-align:right'| 313
@@ Line 2,527: / Line 2,929: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=fr2 plot fr2]
 |-
-| 230
+| 229
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fr3 fr3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000180615.1/ GCF_000180615.1]
+| tbd
 | style='text-align:right'| 6
 | style='text-align:right'| 229
@@ Line 2,539: / Line 2,943: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=fr3 plot fr3]
 |-
-| 231
+| 230
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=fulGla1 fulGla1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690835.1/ GCF_000690835.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 8
 | style='text-align:right'| 336.5
@@ Line 2,551: / Line 2,957: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=fulGla1 plot fulGla1]
 |-
-| 232
+| 231
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1 gadMor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gadMor1 gadMor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000231765.1/ GCA_000231765.1]
+| tbd
 | style='text-align:right'| 168
 | style='text-align:right'| 53
@@ Line 2,563: / Line 2,971: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gadMor1 plot gadMor1]
 |-
-| 233
+| 232
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal2 galGal2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal2 galGal2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 114
 | style='text-align:right'| 40
@@ Line 2,575: / Line 2,985: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=galGal2 plot galGal2]
 |-
-| 234
+| 233
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal3 galGal3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal3 galGal3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 729
 | style='text-align:right'| 37
@@ Line 2,587: / Line 2,999: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=galGal3 plot galGal3]
 |-
-| 235
+| 234
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal4 galGal4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002315.3/ GCF_000002315.3]
+| Celera Assembler v. 5.4
 | style='text-align:right'| 55
 | style='text-align:right'| 401
@@ Line 2,599: / Line 3,013: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=galGal4 plot galGal4]
 |-
-| 236
+| 235
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galGal5 galGal5]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002315.4/ GCF_000002315.4]
+| MHAP/PBcR v. 8.2beta
 | style='text-align:right'| 1
 | style='text-align:right'| 33
@@ Line 2,611: / Line 3,027: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=galGal5 plot galGal5]
 |-
-| 237
+| 236
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=galVar1 galVar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000696425.1/ GCF_000696425.1]
+| SOAPdenovo2 v. April 2014
 | style='text-align:right'| 58964
 | style='text-align:right'| 61
@@ Line 2,623: / Line 3,041: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=galVar1 plot galVar1]
 |-
-| 238
+| 237
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1 gasAcu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gasAcu1 gasAcu1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 8
 | style='text-align:right'| 46.5
@@ Line 2,635: / Line 3,055: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gasAcu1 plot gasAcu1]
 |-
-| 240
+| 239
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavGan0 gavGan0]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavGan0 gavGan0]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 30236
 | style='text-align:right'| 134
@@ Line 2,647: / Line 3,069: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gavGan0 plot gavGan0]
 |-
-| 241
+| 240
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gavSte1 gavSte1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690875.1/ GCF_000690875.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 5
 | style='text-align:right'| 164
@@ Line 2,659: / Line 3,083: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gavSte1 plot gavSte1]
 |-
-| 242
+| 241
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=geoFor1 geoFor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000277835.1/ GCF_000277835.1]
+| SOAPdenovo v. 2.01
 | style='text-align:right'| 32
 | style='text-align:right'| 105.5
@@ Line 2,671: / Line 3,097: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=geoFor1 plot geoFor1]
 |-
-| 244
+| 243
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor2 gorGor2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor2 gorGor2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 6585
 | style='text-align:right'| 247
@@ Line 2,683: / Line 3,111: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gorGor2 plot gorGor2]
 |-
-| 245
+| 244
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 gorGor3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor3 gorGor3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000151905.1/ GCF_000151905.1]
+| tbd
 | style='text-align:right'| 6926
 | style='text-align:right'| 246
@@ Line 2,695: / Line 3,125: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gorGor3 plot gorGor3]
 |-
-| 246
+| 245
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor4 gorGor4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor4 gorGor4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000151905.3/ GCA_000151905.3]
+| tbd
 | style='text-align:right'| 8691
 | style='text-align:right'| 94
@@ Line 2,707: / Line 3,139: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=gorGor4 plot gorGor4]
 |-
-| 248
+| 247
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon1 haeCon1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon1 haeCon1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 25
 | style='text-align:right'| 39
@@ Line 2,719: / Line 3,153: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=haeCon1 plot haeCon1]
 |-
-| 249
+| 248
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2 haeCon2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2 haeCon2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 5378
 | style='text-align:right'| 149
@@ Line 2,731: / Line 3,167: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=haeCon2 plot haeCon2]
 |-
-| 250
+| 249
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halAlb1 halAlb1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000691405.1/ GCF_000691405.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 11
 | style='text-align:right'| 126
@@ Line 2,743: / Line 3,181: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=halAlb1 plot halAlb1]
 |-
-| 251
+| 250
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=halLeu1 halLeu1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000737465.1/ GCF_000737465.1]
+| SOAPdenovo2 v. May 2014
 | style='text-align:right'| 14
 | style='text-align:right'| 280
@@ Line 2,755: / Line 3,195: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=halLeu1 plot halLeu1]
 |-
-| 252
+| 251
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hapBur1 hapBur1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000239415.1/ GCF_000239415.1]
+| ALLPATHS-LG v. R35951
 | style='text-align:right'| 965
 | style='text-align:right'| 95
@@ Line 2,767: / Line 3,209: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hapBur1 plot hapBur1]
 |-
-| 253
+| 252
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1 hetBac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1 hetBac1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000223415.1/ GCA_000223415.1]
+| Celera assembler v. 6.0
 | style='text-align:right'| 3
 | style='text-align:right'| 228
@@ Line 2,779: / Line 3,223: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hetBac1 plot hetBac1]
 |-
-| 254
+| 253
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla1 hetGla1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla1 hetGla1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 743
 | style='text-align:right'| 313
@@ Line 2,791: / Line 3,237: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hetGla1 plot hetGla1]
 |-
-| 255
+| 254
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetGla2 hetGla2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000247695.1/ GCF_000247695.1]
+| AllPaths v. R39605
 | style='text-align:right'| 595
 | style='text-align:right'| 70
@@ Line 2,803: / Line 3,251: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hetGla2 plot hetGla2]
 |-
-| 256
+| 255
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg19 hg19]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg19 hg19]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1
 | style='text-align:right'| 200
@@ Line 2,815: / Line 3,265: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hg19 plot hg19]
 |-
-| 261
+| 256
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hg38 hg38]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26/ GCF_000001405.26]
+| tbd
 | style='text-align:right'| 12
 | style='text-align:right'| 78
@@ Line 2,827: / Line 3,279: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=hg38 plot hg38]
 |-
-| 270
+| 259
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=jacJac1 jacJac1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000280705.1/ GCF_000280705.1]
+| ALLPATHS v. R41689 HAPLOIDIFY=True
 | style='text-align:right'| 2666
 | style='text-align:right'| 63
@@ Line 2,839: / Line 3,293: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=jacJac1 plot jacJac1]
 |-
-| 271
+| 260
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=latCha1 latCha1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000225785.1/ GCF_000225785.1]
+| AllPaths v. R36819
 | style='text-align:right'| 2038
 | style='text-align:right'| 77
@@ Line 2,851: / Line 3,307: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=latCha1 plot latCha1]
 |-
-| 273
+| 262
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepDis1 lepDis1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000691785.1/ GCF_000691785.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 1
 | style='text-align:right'| 50
@@ Line 2,863: / Line 3,321: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=lepDis1 plot lepDis1]
 |-
-| 274
+| 263
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepOcu1 lepOcu1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000242695.1/ GCF_000242695.1]
+| AllPaths v. R38293
 | style='text-align:right'| 2079
 | style='text-align:right'| 95
@@ Line 2,875: / Line 3,335: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=lepOcu1 plot lepOcu1]
 |-
-| 275
+| 264
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1 lepWed1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lepWed1 lepWed1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000349705.1/ GCF_000349705.1]
+| allpaths v. R41856 HAPLOIDIFY=True
 | style='text-align:right'| 2022
 | style='text-align:right'| 63
@@ Line 2,887: / Line 3,349: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=lepWed1 plot lepWed1]
 |-
-| 276
+| 265
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=letCam1 letCam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=letCam1 letCam1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000466285.1/ GCA_000466285.1]
+| Newbler v. 2.7
 | style='text-align:right'| 1453
 | style='text-align:right'| 69
@@ Line 2,899: / Line 3,363: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=letCam1 plot letCam1]
 |-
-| 277
+| 266
 | 1880
-| linHum0
+| style='text-align:center;'| linHum0
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000217595.1/ GCF_000217595.1]
+| CABOG v. 5.3
 | style='text-align:right'| 179
 | style='text-align:right'| 48
@@ Line 2,911: / Line 3,377: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=linHum0 plot linHum0]
 |-
-| 278
+| 267
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lipVex1 lipVex1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lipVex1 lipVex1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000442215.1/ GCF_000442215.1]
+| SOAPdenovo v. 2.01
 | style='text-align:right'| 292
 | style='text-align:right'| 92
@@ Line 2,923: / Line 3,391: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=lipVex1 plot lipVex1]
 |-
-| 279
+| 268
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1 loaLoa1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1 loaLoa1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000183805.3/ GCA_000183805.3]
+| Newbler v. 2.1-PreRelease-4/28/2009
 | style='text-align:right'| 376
 | style='text-align:right'| 382
@@ Line 2,935: / Line 3,405: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=loaLoa1 plot loaLoa1]
 |-
-| 280
+| 269
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr1 loxAfr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr1 loxAfr1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 79
 | style='text-align:right'| 44
@@ Line 2,947: / Line 3,419: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=loxAfr1 plot loxAfr1]
 |-
-| 281
+| 270
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr2 loxAfr2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr2 loxAfr2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 78
 | style='text-align:right'| 165.5
@@ Line 2,959: / Line 3,433: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=loxAfr2 plot loxAfr2]
 |-
-| 282
+| 271
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loxAfr3 loxAfr3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001905.1/ GCF_000001905.1]
+| tbd
 | style='text-align:right'| 11
 | style='text-align:right'| 45
@@ Line 2,971: / Line 3,447: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=loxAfr3 plot loxAfr3]
 |-
-| 283
+| 272
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug1 macEug1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug1 macEug1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 7319
 | style='text-align:right'| 57
@@ Line 2,983: / Line 3,461: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=macEug1 plot macEug1]
 |-
-| 284
+| 273
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macEug2 macEug2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000004035.1/ GCA_000004035.1]
+| tbd
 | style='text-align:right'| 11689
 | style='text-align:right'| 55
@@ Line 2,995: / Line 3,475: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=macEug2 plot macEug2]
 |-
-| 285
+| 274
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macFas5 macFas5]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000364345.1/ GCF_000364345.1]
+| SOAPdenovo v. 1.0.5, SRPRISM v. 2.4; ARGO v. 0.1
 | style='text-align:right'| 1138
 | style='text-align:right'| 106.5
@@ Line 3,007: / Line 3,489: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=macFas5 plot macFas5]
 |-
-| 286
+| 275
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macNem1 macNem1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=macNem1 macNem1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000956065.1/ GCF_000956065.1]
+| AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2; PBJelly2 v. 14.9.9
 | style='text-align:right'| 1828
 | style='text-align:right'| 95
@@ Line 3,019: / Line 3,503: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=macNem1 plot macNem1]
 |-
-| 287
+| 276
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manPen1 manPen1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manPen1 manPen1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000738955.1/ GCA_000738955.1]
+| SOAPdenovo v. May 2014
 | style='text-align:right'| 37129
 | style='text-align:right'| 101
@@ Line 3,031: / Line 3,517: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=manPen1 plot manPen1]
 |-
-| 288
+| 277
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=manVit1 manVit1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000692015.1/ GCF_000692015.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 25
 | style='text-align:right'| 231
@@ Line 3,043: / Line 3,531: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=manVit1 plot manVit1]
 |-
-| 290
+| 279
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mayZeb1 mayZeb1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000238955.1/ GCF_000238955.1]
+| AllPaths v. R37043
 | style='text-align:right'| 1831
 | style='text-align:right'| 95
@@ Line 3,055: / Line 3,545: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mayZeb1 plot mayZeb1]
 |-
-| 291
+| 280
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1 megLyr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=megLyr1 megLyr1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000465345.1/ GCA_000465345.1]
+| CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05
 | style='text-align:right'| 33
 | style='text-align:right'| 38
@@ Line 3,067: / Line 3,559: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=megLyr1 plot megLyr1]
 |-
-| 292
+| 281
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal1 melGal1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 834
 | style='text-align:right'| 127
@@ Line 3,079: / Line 3,573: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=melGal1 plot melGal1]
 |-
-| 293
+| 282
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal5 melGal5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melGal5 melGal5]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000146605.2/ GCF_000146605.2]
+| MaSuRCA v. 1.9.2
 | style='text-align:right'| 84
 | style='text-align:right'| 181
@@ Line 3,091: / Line 3,587: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=melGal5 plot melGal5]
 |-
-| 296
+| 285
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2 melInc2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2 melInc2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 3
 | style='text-align:right'| 77
@@ Line 3,103: / Line 3,601: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=melInc2 plot melInc2]
 |-
-| 297
+| 286
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melUnd1 melUnd1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000238935.1/ GCF_000238935.1]
+| Celera v. 6.1
 | style='text-align:right'| 39
 | style='text-align:right'| 89
@@ Line 3,115: / Line 3,615: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=melUnd1 plot melUnd1]
 |-
-| 298
+| 287
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=merNub1 merNub1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000691845.1/ GCF_000691845.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 2
 | style='text-align:right'| 154.5
@@ Line 3,127: / Line 3,629: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=merNub1 plot merNub1]
 |-
-| 299
+| 288
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesAur1 mesAur1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000349665.1/ GCF_000349665.1]
+| allpaths v. R44683
 | style='text-align:right'| 3589
 | style='text-align:right'| 71
@@ Line 3,139: / Line 3,643: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mesAur1 plot mesAur1]
 |-
-| 300
+| 289
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mesUni1 mesUni1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000695765.1/ GCF_000695765.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 4
 | style='text-align:right'| 347
@@ Line 3,151: / Line 3,657: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mesUni1 plot mesUni1]
 |-
-| 301
+| 290
 | 1880
-| micMur0
+| style='text-align:center;'| micMur0
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 295
 | style='text-align:right'| 256
@@ Line 3,163: / Line 3,671: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=micMur0 plot micMur0]
 |-
-| 302
+| 291
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1 micMur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur1 micMur1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000165445.1/ GCA_000165445.1]
+| tbd
 | style='text-align:right'| 124
 | style='text-align:right'| 124.5
@@ Line 3,175: / Line 3,685: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=micMur1 plot micMur1]
 |-
-| 303
+| 292
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2 micMur2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur2 micMur2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000165445.1/ GCF_000165445.1]
+| AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9
 | style='text-align:right'| 774
 | style='text-align:right'| 90
@@ Line 3,187: / Line 3,699: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=micMur2 plot micMur2]
 |-
-| 304
+| 293
 | 2017
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur3 micMur3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micMur3 micMur3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000165445.2/ GCF_000165445.2]
+| AllPathsLG v. 41070; Atlas Link v. 1.0; Atlas GapFill v. 2.0; PBJelly2 v. 14.9.9; Lachesis v. shendurelab-LACHESIS-2151de9; BioNano IrysSolve v. 2.1
 | style='text-align:right'| 325
 | style='text-align:right'| 95
@@ Line 3,199: / Line 3,713: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=micMur3 plot micMur3]
 |-
-| 305
+| 294
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=micOch1 micOch1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000317375.1/ GCF_000317375.1]
+| allpaths v. R41985 HAPLOIDIFY=True SPRS_WRITE_SEPS=True
 | style='text-align:right'| 6788
 | style='text-align:right'| 65
@@ Line 3,211: / Line 3,727: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=micOch1 plot micOch1]
 |-
-| 306
+| 295
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm10 mm10]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 2
 | style='text-align:right'| 390.5
@@ Line 3,223: / Line 3,741: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm10 plot mm10]
 |-
-| 310
+| 296
 | 1880
-| mm5
+| style='text-align:center;'| mm5
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 204
 | style='text-align:right'| 48.5
@@ Line 3,235: / Line 3,755: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm5 plot mm5]
 |-
-| 311
+| 297
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm6 mm6]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm6 mm6]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 117
 | style='text-align:right'| 48
@@ Line 3,247: / Line 3,769: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm6 plot mm6]
 |-
-| 312
+| 298
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm7 mm7]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm7 mm7]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 45
 | style='text-align:right'| 48
@@ Line 3,259: / Line 3,783: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm7 plot mm7]
 |-
-| 313
+| 299
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm8 mm8]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm8 mm8]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 6
 | style='text-align:right'| 161
@@ Line 3,271: / Line 3,797: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm8 plot mm8]
 |-
-| 314
+| 300
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm9 mm9]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=mm9 mm9]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 2
 | style='text-align:right'| 390.5
@@ Line 3,283: / Line 3,811: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=mm9 plot mm9]
 |-
-| 315
+| 301
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom1 monDom1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom1 monDom1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 18
 | style='text-align:right'| 53.5
@@ Line 3,295: / Line 3,825: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=monDom1 plot monDom1]
 |-
-| 316
+| 302
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom2 monDom2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom2 monDom2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 5
 | style='text-align:right'| 428
@@ Line 3,307: / Line 3,839: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=monDom2 plot monDom2]
 |-
-| 317
+| 303
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom4 monDom4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom4 monDom4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 9
 | style='text-align:right'| 183
@@ Line 3,319: / Line 3,853: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=monDom4 plot monDom4]
 |-
-| 318
+| 304
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=monDom5 monDom5]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 9
 | style='text-align:right'| 183
@@ Line 3,331: / Line 3,867: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=monDom5 plot monDom5]
 |-
-| 319
+| 305
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musDom2 musDom2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musDom2 musDom2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000371365.1/ GCF_000371365.1]
+| AllPathsLG v. September 2012
 | style='text-align:right'| 1284
 | style='text-align:right'| 85
@@ Line 3,343: / Line 3,881: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=musDom2 plot musDom2]
 |-
-| 320
+| 306
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1 musFur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=musFur1 musFur1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000215625.1/ GCA_000215625.1]
+| ALLPATHS-LG v. R36167
 | style='text-align:right'| 1009
 | style='text-align:right'| 84
@@ Line 3,355: / Line 3,895: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=musFur1 plot musFur1]
 |-
-| 321
+| 307
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoBra1 myoBra1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoBra1 myoBra1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000412655.1/ GCF_000412655.1]
+| SOAP de novo v. 2.04
 | style='text-align:right'| 356
 | style='text-align:right'| 119
@@ Line 3,367: / Line 3,909: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=myoBra1 plot myoBra1]
 |-
-| 322
+| 308
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1 myoDav1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoDav1 myoDav1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000327345.1/ GCF_000327345.1]
+| SOAPdenovo v. 1.06
 | style='text-align:right'| 303
 | style='text-align:right'| 151
@@ Line 3,379: / Line 3,923: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=myoDav1 plot myoDav1]
 |-
-| 323
+| 309
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc1 myoLuc1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc1 myoLuc1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 42
 | style='text-align:right'| 47
@@ Line 3,391: / Line 3,937: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=myoLuc1 plot myoLuc1]
 |-
-| 324
+| 310
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=myoLuc2 myoLuc2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000147115.1/ GCF_000147115.1]
+| Arachne v. Dev. Jan 2010
 | style='text-align:right'| 7
 | style='text-align:right'| 39
@@ Line 3,403: / Line 3,951: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=myoLuc2 plot myoLuc2]
 |-
-| 325
+| 311
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanGal1 nanGal1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanGal1 nanGal1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000622305.1/ GCF_000622305.1]
+| SOAPdenovo v. 2.04.4
 | style='text-align:right'| 730
 | style='text-align:right'| 126
@@ Line 3,415: / Line 3,965: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nanGal1 plot nanGal1]
 |-
-| 326
+| 312
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1 nanPar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nanPar1 nanPar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000935625.1/ GCA_000935625.1]
+| SOAPdenovo v. 1.06
 | style='text-align:right'| 1716
 | style='text-align:right'| 194
@@ Line 3,427: / Line 3,979: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nanPar1 plot nanPar1]
 |-
-| 327
+| 313
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nasLar1 nasLar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nasLar1 nasLar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000772465.1/ GCA_000772465.1]
+| phredPhrap v. 1.080812
 | style='text-align:right'| 614
 | style='text-align:right'| 43
@@ Line 3,439: / Line 3,993: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nasLar1 plot nasLar1]
 |-
-| 328
+| 314
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1 necAme1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1 necAme1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000507365.1/ GCF_000507365.1]
+| Newbler v. MapAsmResearch-04/19/2010-patch-08/17/2010
 | style='text-align:right'| 459
 | style='text-align:right'| 54
@@ Line 3,451: / Line 4,007: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=necAme1 plot necAme1]
 |-
-| 329
+| 315
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nemVec1 nemVec1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nemVec1 nemVec1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 25
 | style='text-align:right'| 378
@@ Line 3,463: / Line 4,021: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nemVec1 plot nemVec1]
 |-
-| 330
+| 316
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=neoBri1 neoBri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000239395.1/ GCF_000239395.1]
+| ALLPATHS-LG v. R36800
 | style='text-align:right'| 5040
 | style='text-align:right'| 95
@@ Line 3,475: / Line 4,035: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=neoBri1 plot neoBri1]
 |-
-| 331
+| 317
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nipNip1 nipNip1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000708225.1/ GCF_000708225.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 41
 | style='text-align:right'| 154
@@ Line 3,487: / Line 4,049: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nipNip1 plot nipNip1]
 |-
-| 332
+| 318
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu1 nomLeu1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu1 nomLeu1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 859
 | style='text-align:right'| 141
@@ Line 3,499: / Line 4,063: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nomLeu1 plot nomLeu1]
 |-
-| 333
+| 319
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu2 nomLeu2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu2 nomLeu2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 859
 | style='text-align:right'| 141
@@ Line 3,511: / Line 4,077: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nomLeu2 plot nomLeu2]
 |-
-| 334
+| 320
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=nomLeu3 nomLeu3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000146795.3/ GCA_000146795.3]
+| tbd
 | style='text-align:right'| 861
 | style='text-align:right'| 141
@@ Line 3,523: / Line 4,091: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=nomLeu3 plot nomLeu3]
 |-
-| 335
+| 321
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=notCor1 notCor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000735185.1/ GCF_000735185.1]
+| Celera Assembler v. 7.0
 | style='text-align:right'| 174
 | style='text-align:right'| 91.5
@@ Line 3,535: / Line 4,105: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=notCor1 plot notCor1]
 |-
-| 336
+| 322
 | 1880
-| ochPri0
+| style='text-align:center;'| ochPri0
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 569
 | style='text-align:right'| 101
@@ Line 3,547: / Line 4,119: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ochPri0 plot ochPri0]
 |-
-| 337
+| 323
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2 ochPri2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri2 ochPri2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000164825.1/ GCA_000164825.1]
+| tbd
 | style='text-align:right'| 313
 | style='text-align:right'| 55
@@ Line 3,559: / Line 4,133: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ochPri2 plot ochPri2]
 |-
-| 338
+| 324
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ochPri3 ochPri3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000292845.1/ GCF_000292845.1]
+| Allpaths v. R41206
 | style='text-align:right'| 1958
 | style='text-align:right'| 69
@@ Line 3,571: / Line 4,147: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ochPri3 plot ochPri3]
 |-
-| 339
+| 325
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=octDeg1 octDeg1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000260255.1/ GCF_000260255.1]
+| allpaths v. R40507 LITTLE_HELPS_BIG=False
 | style='text-align:right'| 2582
 | style='text-align:right'| 68
@@ Line 3,583: / Line 4,161: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=octDeg1 plot octDeg1]
 |-
-| 340
+| 326
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=odoRosDiv1 odoRosDiv1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000321225.1/ GCA_000321225.1]
+| AllPaths v. 41070; Atlas-link v. 1.0; Atlas-gapfill v. 2.2
 | style='text-align:right'| 2581
 | style='text-align:right'| 68
@@ Line 3,595: / Line 4,175: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=odoRosDiv1 plot odoRosDiv1]
 |-
-| 341
+| 327
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1 oncVol1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1 oncVol1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000499405.1/ GCA_000499405.1]
+| tbd
 | style='text-align:right'| 10
 | style='text-align:right'| 89.5
@@ Line 3,607: / Line 4,189: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oncVol1 plot oncVol1]
 |-
-| 342
+| 328
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=opiHoa1 opiHoa1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000692075.1/ GCF_000692075.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 80
 | style='text-align:right'| 170.5
@@ Line 3,619: / Line 4,203: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=opiHoa1 plot opiHoa1]
 |-
-| 343
+| 329
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1 orcOrc1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=orcOrc1 orcOrc1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000331955.2/ GCF_000331955.2]
+| AllPaths v. 41070; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2
 | style='text-align:right'| 2677
 | style='text-align:right'| 66
@@ Line 3,631: / Line 4,217: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=orcOrc1 plot orcOrc1]
 |-
-| 344
+| 330
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil1 oreNil1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oreNil1 oreNil1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1903
 | style='text-align:right'| 93
@@ Line 3,643: / Line 4,231: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oreNil1 plot oreNil1]
 |-
-| 345
+| 331
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna1 ornAna1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002275.2/ GCF_000002275.2]
+| tbd
 | style='text-align:right'| 793
 | style='text-align:right'| 49
@@ Line 3,655: / Line 4,245: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ornAna1 plot ornAna1]
 |-
-| 346
+| 332
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ornAna2 ornAna2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000002275.2/ GCA_000002275.2]
+| tbd
 | style='text-align:right'| 793
 | style='text-align:right'| 49
@@ Line 3,667: / Line 4,259: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ornAna2 plot ornAna2]
 |-
-| 347
+| 333
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryAfe1 oryAfe1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000298275.1/ GCF_000298275.1]
+| allpaths v. R40776 LITTLE_HELPS_BIG=False
 | style='text-align:right'| 3595
 | style='text-align:right'| 65
@@ Line 3,679: / Line 4,273: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oryAfe1 plot oryAfe1]
 |-
-| 348
+| 334
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun1 oryCun1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun1 oryCun1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 122
 | style='text-align:right'| 278.5
@@ Line 3,691: / Line 4,287: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oryCun1 plot oryCun1]
 |-
-| 349
+| 335
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryCun2 oryCun2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000003625.3/ GCF_000003625.3]
+| tbd
 | style='text-align:right'| 12
 | style='text-align:right'| 44.5
@@ Line 3,703: / Line 4,301: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oryCun2 plot oryCun2]
 |-
-| 350
+| 336
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat1 oryLat1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat1 oryLat1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 141
 | style='text-align:right'| 144
@@ Line 3,715: / Line 4,315: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oryLat1 plot oryLat1]
 |-
-| 351
+| 337
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2 oryLat2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oryLat2 oryLat2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 141
 | style='text-align:right'| 144
@@ Line 3,727: / Line 4,329: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oryLat2 plot oryLat2]
 |-
-| 353
+| 339
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar3 otoGar3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181295.1/ GCF_000181295.1]
+| ALLPATHS-LG v. R35710
 | style='text-align:right'| 3569
 | style='text-align:right'| 86
@@ Line 3,739: / Line 4,343: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=otoGar3 plot otoGar3]
 |-
-| 354
+| 340
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri1 oviAri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri1 oviAri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000005525.1/ GCA_000005525.1]
+| tbd
 | style='text-align:right'| 5934
 | style='text-align:right'| 53
@@ Line 3,751: / Line 4,357: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oviAri1 plot oviAri1]
 |-
-| 355
+| 341
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oviAri3 oviAri3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000298735.1/ GCF_000298735.1]
+| SOAPdenovo v. 1.03
 | style='text-align:right'| 149
 | style='text-align:right'| 193
@@ Line 3,763: / Line 4,371: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oviAri3 plot oviAri3]
 |-
-| 356
+| 342
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oxyTri2 oxyTri2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oxyTri2 oxyTri2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 523
 | style='text-align:right'| 37
@@ Line 3,775: / Line 4,385: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=oxyTri2 plot oxyTri2]
 |-
-| 357
+| 343
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1 panHod1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panHod1 panHod1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000400835.1/ GCF_000400835.1]
+| SOAPdenovo v. 2.1
 | style='text-align:right'| 321
 | style='text-align:right'| 129
@@ Line 3,787: / Line 4,399: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panHod1 plot panHod1]
 |-
-| 358
+| 344
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1 panPan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan1 panPan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000258655.1/ GCF_000258655.1]
+| Celera Assembler v. 5.4.3
 | style='text-align:right'| 63
 | style='text-align:right'| 133
@@ Line 3,799: / Line 4,413: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panPan1 plot panPan1]
 |-
-| 359
+| 345
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan2 panPan2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panPan2 panPan2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 70
 | style='text-align:right'| 160
@@ Line 3,811: / Line 4,427: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panPan2 plot panPan2]
 |-
-| 360
+| 346
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1 panRed1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1 panRed1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000341325.1/ GCA_000341325.1]
+| Velvet v. 1.2.07
 | style='text-align:right'| 123
 | style='text-align:right'| 56
@@ Line 3,823: / Line 4,441: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panRed1 plot panRed1]
 |-
-| 361
+| 347
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTig1 panTig1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000464555.1/ GCF_000464555.1]
+| SOAPdenovo v. 08-Jul-2011
 | style='text-align:right'| 59
 | style='text-align:right'| 111
@@ Line 3,835: / Line 4,455: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTig1 plot panTig1]
 |-
-| 362
+| 348
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro1 panTro1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro1 panTro1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 5719
 | style='text-align:right'| 388
@@ Line 3,847: / Line 4,469: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTro1 plot panTro1]
 |-
-| 363
+| 349
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro2 panTro2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro2 panTro2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 692
 | style='text-align:right'| 52
@@ Line 3,859: / Line 4,483: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTro2 plot panTro2]
 |-
-| 364
+| 350
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro3 panTro3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 472
 | style='text-align:right'| 54
@@ Line 3,871: / Line 4,497: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTro3 plot panTro3]
 |-
-| 365
+| 351
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4 panTro4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro4 panTro4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001515.6/ GCF_000001515.6]
+| tbd
 | style='text-align:right'| 472
 | style='text-align:right'| 54
@@ Line 3,883: / Line 4,511: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTro4 plot panTro4]
 |-
-| 366
+| 352
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro5 panTro5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panTro5 panTro5]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001515.7/ GCF_000001515.7]
+| DiscoVar v. 51280; PBJelly v. 14.9.9
 | style='text-align:right'| 2937
 | style='text-align:right'| 199
@@ Line 3,895: / Line 4,525: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=panTro5 plot panTro5]
 |-
-| 367
+| 353
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papAnu2 papAnu2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000264685.1/ GCF_000264685.1]
+| CABOG v. 6.1; ATLAS-LINK v. 1.0; ATLAS-GAPFILL v. 2.0
 | style='text-align:right'| 727
 | style='text-align:right'| 138
@@ Line 3,907: / Line 4,539: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=papAnu2 plot papAnu2]
 |-
-| 368
+| 354
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papHam1 papHam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=papHam1 papHam1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 22041
 | style='text-align:right'| 56
@@ Line 3,919: / Line 4,553: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=papHam1 plot papHam1]
 |-
-| 369
+| 355
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelCri1 pelCri1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000687375.1/ GCF_000687375.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 3
 | style='text-align:right'| 72
@@ Line 3,931: / Line 4,567: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pelCri1 plot pelCri1]
 |-
-| 370
+| 356
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pelSin1 pelSin1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000230535.1/ GCF_000230535.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 126
 | style='text-align:right'| 138
@@ Line 3,943: / Line 4,581: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pelSin1 plot pelSin1]
 |-
-| 371
+| 357
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=perManBai1 perManBai1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000500345.1/ GCF_000500345.1]
+| Newbler v. 2.3 and 2.5; AllPaths v. 41070; ATLAS-gapfill v. 2.2; ATLAS-link v. 1.0
 | style='text-align:right'| 7908
 | style='text-align:right'| 80
@@ Line 3,955: / Line 4,595: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=perManBai1 plot perManBai1]
 |-
-| 372
+| 358
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar1 petMar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar1 petMar1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 542
 | style='text-align:right'| 47
@@ Line 3,967: / Line 4,609: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=petMar1 plot petMar1]
 |-
-| 373
+| 359
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2 petMar2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=petMar2 petMar2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000148955.1/ GCA_000148955.1]
+| Arachne v. 3.2
 | style='text-align:right'| 31
 | style='text-align:right'| 86
@@ Line 3,979: / Line 4,623: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=petMar2 plot petMar2]
 |-
-| 374
+| 360
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaCar1 phaCar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000708925.1/ GCF_000708925.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 2
 | style='text-align:right'| 206
@@ Line 3,991: / Line 4,637: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=phaCar1 plot phaCar1]
 |-
-| 375
+| 361
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phaLep1 phaLep1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000687285.1/ GCF_000687285.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 14
 | style='text-align:right'| 179
@@ Line 4,003: / Line 4,651: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=phaLep1 plot phaLep1]
 |-
-| 376
+| 362
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phoRub1 phoRub1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phoRub1 phoRub1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000687265.1/ GCA_000687265.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 4
 | style='text-align:right'| 288.5
@@ Line 4,015: / Line 4,665: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=phoRub1 plot phoRub1]
 |-
-| 377
+| 363
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phyCat1 phyCat1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=phyCat1 phyCat1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000472045.1/ GCF_000472045.1]
+| AllPaths-LG v. January 2013
 | style='text-align:right'| 684
 | style='text-align:right'| 82.5
@@ Line 4,027: / Line 4,679: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=phyCat1 plot phyCat1]
 |-
-| 378
+| 364
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=picPub1 picPub1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000699005.1/ GCF_000699005.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 59
 | style='text-align:right'| 83
@@ Line 4,039: / Line 4,693: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=picPub1 plot picPub1]
 |-
-| 379
+| 365
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeFor1 poeFor1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000485575.1/ GCF_000485575.1]
+| AllPaths-LG v. July 2013
 | style='text-align:right'| 848
 | style='text-align:right'| 75
@@ Line 4,051: / Line 4,707: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=poeFor1 plot poeFor1]
 |-
-| 380
+| 366
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=poeRet1 poeRet1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1124
 | style='text-align:right'| 87
@@ Line 4,063: / Line 4,721: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=poeRet1 plot poeRet1]
 |-
-| 381
+| 367
 | 1880
-| ponAbe1
+| style='text-align:center;'| ponAbe1
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1528
 | style='text-align:right'| 40
@@ Line 4,075: / Line 4,735: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ponAbe1 plot ponAbe1]
 |-
-| 382
+| 368
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe2 ponAbe2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ponAbe2 ponAbe2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 2239
 | style='text-align:right'| 54
@@ Line 4,087: / Line 4,749: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ponAbe2 plot ponAbe2]
 |-
-| 383
+| 369
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1 priExs1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1 priExs1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 49
 | style='text-align:right'| 121
@@ Line 4,099: / Line 4,763: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=priExs1 plot priExs1]
 |-
-| 384
+| 370
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac1 priPac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac1 priPac1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 121
 | style='text-align:right'| 49
@@ Line 4,111: / Line 4,777: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=priPac1 plot priPac1]
 |-
-| 386
+| 372
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3 priPac3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3 priPac3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 168
 | style='text-align:right'| 49.5
@@ Line 4,123: / Line 4,791: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=priPac3 plot priPac3]
 |-
-| 387
+| 373
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1 proCap1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=proCap1 proCap1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000152225.1/ GCA_000152225.1]
+| Arachne v. before 2009
 | style='text-align:right'| 116
 | style='text-align:right'| 38
@@ Line 4,135: / Line 4,805: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=proCap1 plot proCap1]
 |-
-| 388
+| 374
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pseHum1 pseHum1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000331425.1/ GCF_000331425.1]
+| SOAPdenovo v. 1.5
 | style='text-align:right'| 775
 | style='text-align:right'| 142
@@ Line 4,147: / Line 4,819: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pseHum1 plot pseHum1]
 |-
-| 389
+| 375
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteAle1 pteAle1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000325575.1/ GCA_000325575.1]
+| SOAPdenovo v. 1.06
 | style='text-align:right'| 97
 | style='text-align:right'| 127
@@ Line 4,159: / Line 4,833: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pteAle1 plot pteAle1]
 |-
-| 390
+| 376
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteGut1 pteGut1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000699245.1/ GCF_000699245.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 1
 | style='text-align:right'| 282
@@ Line 4,171: / Line 4,847: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pteGut1 plot pteGut1]
 |-
-| 391
+| 377
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1 ptePar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ptePar1 ptePar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000465405.1/ GCA_000465405.1]
+| CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05
 | style='text-align:right'| 3
 | style='text-align:right'| 31
@@ Line 4,183: / Line 4,861: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ptePar1 plot ptePar1]
 |-
-| 392
+| 378
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pteVam1 pteVam1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000151845.1/ GCA_000151845.1]
+| tbd
 | style='text-align:right'| 68
 | style='text-align:right'| 43.5
@@ Line 4,195: / Line 4,875: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pteVam1 plot pteVam1]
 |-
-| 393
+| 379
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=punNye1 punNye1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000239375.1/ GCF_000239375.1]
+| ALLPATHS-LG v. R37016
 | style='text-align:right'| 1574
 | style='text-align:right'| 95
@@ Line 4,207: / Line 4,889: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=punNye1 plot punNye1]
 |-
-| 394
+| 380
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pygAde1 pygAde1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000699105.1/ GCA_000699105.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 42
 | style='text-align:right'| 113
@@ Line 4,219: / Line 4,903: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pygAde1 plot pygAde1]
 |-
-| 395
+| 381
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=pytBiv1 pytBiv1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000186305.1/ GCF_000186305.1]
+| Soap deNovo v. March 2012
 | style='text-align:right'| 21222
 | style='text-align:right'| 101
@@ Line 4,231: / Line 4,917: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=pytBiv1 plot pytBiv1]
 |-
-| 400
+| 386
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac1 rheMac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac1 rheMac1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 2816
 | style='text-align:right'| 39
@@ Line 4,243: / Line 4,931: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rheMac1 plot rheMac1]
 |-
-| 401
+| 387
 | 2010
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3 rheMac3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac3 rheMac3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000230795.1/ GCA_000230795.1]
+| SOAPdenovo v. 1.0
 | style='text-align:right'| 288
 | style='text-align:right'| 192.5
@@ Line 4,255: / Line 4,945: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rheMac3 plot rheMac3]
 |-
-| 402
+| 388
 | 2015
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 rheMac8]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rheMac8 rheMac8]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000772875.2/ GCF_000772875.2]
+| MaSuRCA v. 1.8.3; PBJelly2 v. 14.9.9
 | style='text-align:right'| 80
 | style='text-align:right'| 99.5
@@ Line 4,267: / Line 4,959: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rheMac8 plot rheMac8]
 |-
-| 403
+| 389
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiBie1 rhiBie1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiBie1 rhiBie1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_001698545.1/ GCF_001698545.1]
+| Newbler v. 71; Anytag v. 70; GOBOND v. 69; GapCloser v. 1.12
 | style='text-align:right'| 4262
 | style='text-align:right'| 228
@@ Line 4,279: / Line 4,973: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rhiBie1 plot rhiBie1]
 |-
-| 404
+| 390
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiFer1 rhiFer1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiFer1 rhiFer1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000465495.1/ GCA_000465495.1]
+| CLC NGS Cell v. 3.20.50819; SOAPdenovo v. 1.05
 | style='text-align:right'| 2
 | style='text-align:right'| 42.5
@@ Line 4,291: / Line 4,987: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rhiFer1 plot rhiFer1]
 |-
-| 405
+| 391
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiRox1 rhiRox1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rhiRox1 rhiRox1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000769185.1/ GCF_000769185.1]
+| SOAPdenovo v. 2013.04
 | style='text-align:right'| 187
 | style='text-align:right'| 158
@@ Line 4,303: / Line 5,001: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rhiRox1 plot rhiRox1]
 |-
-| 406
+| 392
 | 1880
-| ricCom1
+| style='text-align:center;'| ricCom1
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000151685.1/ GCF_000151685.1]
+| tbd
 | style='text-align:right'| 41
 | style='text-align:right'| 332
@@ Line 4,315: / Line 5,015: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ricCom1 plot ricCom1]
 |-
-| 407
+| 393
 | 2003
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn3 rn3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn3 rn3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 574
 | style='text-align:right'| 143
@@ Line 4,327: / Line 5,029: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rn3 plot rn3]
 |-
-| 408
+| 394
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn4 rn4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn4 rn4]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 567
 | style='text-align:right'| 141
@@ Line 4,339: / Line 5,043: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rn4 plot rn4]
 |-
-| 409
+| 395
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn5 rn5]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn5 rn5]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 64
 | style='text-align:right'| 516
@@ Line 4,351: / Line 5,057: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rn5 plot rn5]
 |-
-| 410
+| 396
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rn6 rn6]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000001895.5/ GCF_000001895.5]
+| Atlas Assembly suite v. 2.0; CLCbio v. 1.0; Velvet v. 1.0; PBjelly v. 2.0
 | style='text-align:right'| 719
 | style='text-align:right'| 290
@@ Line 4,363: / Line 5,071: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=rn6 plot rn6]
 |-
-| 415
+| 401
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=saiBol1 saiBol1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000235385.1/ GCA_000235385.1]
+| AllPaths v. R37830
 | style='text-align:right'| 1541
 | style='text-align:right'| 77
@@ Line 4,375: / Line 5,085: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=saiBol1 plot saiBol1]
 |-
-| 417
+| 403
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sarHar1 sarHar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000189315.1/ GCF_000189315.1]
+| Phusion2 v. 1.0
 | style='text-align:right'| 17494
 | style='text-align:right'| 220
@@ Line 4,387: / Line 5,099: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=sarHar1 plot sarHar1]
 |-
-| 418
+| 404
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1 sebNig1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebNig1 sebNig1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000475235.1/ GCA_000475235.1]
+| tbd
 | style='text-align:right'| 168
 | style='text-align:right'| 55.5
@@ Line 4,399: / Line 5,113: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=sebNig1 plot sebNig1]
 |-
-| 419
+| 405
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1 sebRub1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sebRub1 sebRub1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000475215.1/ GCA_000475215.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 119
 | style='text-align:right'| 55
@@ Line 4,411: / Line 5,127: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=sebRub1 plot sebRub1]
 |-
-| 420
+| 406
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=serCan1 serCan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000534875.1/ GCF_000534875.1]
+| tbd
 | style='text-align:right'| 213
 | style='text-align:right'| 97
@@ Line 4,423: / Line 5,141: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=serCan1 plot serCan1]
 |-
-| 421
+| 407
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra1 sorAra1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra1 sorAra1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 229
 | style='text-align:right'| 330
@@ Line 4,435: / Line 5,155: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=sorAra1 plot sorAra1]
 |-
-| 422
+| 408
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sorAra2 sorAra2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181275.1/ GCF_000181275.1]
+| Allpaths v. R41070
 | style='text-align:right'| 3389
 | style='text-align:right'| 75
@@ Line 4,447: / Line 5,169: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=sorAra2 plot sorAra2]
 |-
-| 423
+| 409
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri1 speTri1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri1 speTri1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 99
 | style='text-align:right'| 46
@@ Line 4,459: / Line 5,183: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=speTri1 plot speTri1]
 |-
-| 424
+| 410
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=speTri2 speTri2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000236235.1/ GCF_000236235.1]
+| ALLPATHS v. R37591
 | style='text-align:right'| 2964
 | style='text-align:right'| 95
@@ Line 4,471: / Line 5,197: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=speTri2 plot speTri2]
 |-
-| 425
+| 411
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=stePar1 stePar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000690725.1/ GCF_000690725.1]
+| ALLPATHS-LG v. August 2013
 | style='text-align:right'| 554
 | style='text-align:right'| 65
@@ Line 4,483: / Line 5,211: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=stePar1 plot stePar1]
 |-
-| 426
+| 412
 | 1880
-| strCam0
+| style='text-align:center;'| strCam0
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 20
 | style='text-align:right'| 243
@@ Line 4,495: / Line 5,225: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strCam0 plot strCam0]
 |-
-| 427
+| 413
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strCam1 strCam1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000698965.1/ GCF_000698965.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 19
 | style='text-align:right'| 246
@@ Line 4,507: / Line 5,239: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strCam1 plot strCam1]
 |-
-| 428
+| 414
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur1 strPur1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur1 strPur1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 1291
 | style='text-align:right'| 153
@@ Line 4,519: / Line 5,253: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strPur1 plot strPur1]
 |-
-| 429
+| 415
 | 2006
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur2 strPur2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur2 strPur2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 367
 | style='text-align:right'| 55
@@ Line 4,531: / Line 5,267: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strPur2 plot strPur2]
 |-
-| 430
+| 416
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur3 strPur3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur3 strPur3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 989
 | style='text-align:right'| 56
@@ Line 4,543: / Line 5,281: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strPur3 plot strPur3]
 |-
-| 431
+| 417
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strPur4 strPur4]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002235.3/ GCF_000002235.3]
+| Atlas v. WGS for Sanger Assembly, Atlas-Link and Atlas-GapFill for SOLiD and Illumina improvement
 | style='text-align:right'| 1612
 | style='text-align:right'| 100
@@ Line 4,555: / Line 5,295: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strPur4 plot strPur4]
 |-
-| 433
+| 419
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_001040885.1/ GCA_001040885.1]
+| tbd
 | style='text-align:right'| 2
 | style='text-align:right'| 54.5
@@ Line 4,567: / Line 5,309: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=strRat2 plot strRat2]
 |-
-| 435
+| 421
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr1 susScr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr1 susScr1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 371
 | style='text-align:right'| 43
@@ Line 4,579: / Line 5,323: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=susScr1 plot susScr1]
 |-
-| 436
+| 422
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr2 susScr2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=susScr2 susScr2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 371
 | style='text-align:right'| 43
@@ Line 4,591: / Line 5,337: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=susScr2 plot susScr2]
 |-
-| 437
+| 423
 | 1880
-| taeGut0
+| style='text-align:center;'| taeGut0
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 212
 | style='text-align:right'| 45
@@ Line 4,603: / Line 5,351: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=taeGut0 plot taeGut0]
 |-
-| 438
+| 424
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut1 taeGut1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut1 taeGut1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 223
 | style='text-align:right'| 45
@@ Line 4,615: / Line 5,365: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=taeGut1 plot taeGut1]
 |-
-| 439
+| 425
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taeGut2 taeGut2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000151805.1/ GCF_000151805.1]
+| PCAP v. 2008
 | style='text-align:right'| 219
 | style='text-align:right'| 44
@@ Line 4,627: / Line 5,379: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=taeGut2 plot taeGut2]
 |-
-| 441
+| 427
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1 takFla1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=takFla1 takFla1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000400755.1/ GCA_000400755.1]
+| HAPs v. 0.2.2
 | style='text-align:right'| 365
 | style='text-align:right'| 241
@@ Line 4,639: / Line 5,393: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=takFla1 plot takFla1]
 |-
-| 442
+| 428
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarIhg38 tarIhg38]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarIhg38 tarIhg38]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 12
 | style='text-align:right'| 78
@@ Line 4,651: / Line 5,407: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tarIhg38 plot tarIhg38]
 |-
-| 443
+| 429
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr1 tarSyr1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr1 tarSyr1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 331
 | style='text-align:right'| 70
@@ Line 4,663: / Line 5,421: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tarSyr1 plot tarSyr1]
 |-
-| 444
+| 430
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tarSyr2 tarSyr2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000164805.1/ GCF_000164805.1]
+| Celera v. DEC-2012
 | style='text-align:right'| 189
 | style='text-align:right'| 56
@@ Line 4,675: / Line 5,435: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tarSyr2 plot tarSyr2]
 |-
-| 445
+| 431
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tauEry1 tauEry1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000709365.1/ GCF_000709365.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 1
 | style='text-align:right'| 50
@@ Line 4,687: / Line 5,449: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tauEry1 plot tauEry1]
 |-
-| 446
+| 432
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig1 tetNig1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig1 tetNig1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 64
 | style='text-align:right'| 272.5
@@ Line 4,699: / Line 5,463: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tetNig1 plot tetNig1]
 |-
-| 447
+| 433
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2 tetNig2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tetNig2 tetNig2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 70
 | style='text-align:right'| 298
@@ Line 4,711: / Line 5,477: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tetNig2 plot tetNig2]
 |-
-| 448
+| 434
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut1 tinGut1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut1 tinGut1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000705375.1/ GCF_000705375.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 18
 | style='text-align:right'| 96
@@ Line 4,723: / Line 5,491: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tinGut1 plot tinGut1]
 |-
-| 449
+| 435
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tinGut2 tinGut2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000705375.1/ GCF_000705375.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 18
 | style='text-align:right'| 96
@@ Line 4,735: / Line 5,505: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tinGut2 plot tinGut2]
 |-
-| 450
+| 436
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas1 triCas1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas1 triCas1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 75
 | style='text-align:right'| 100
@@ Line 4,747: / Line 5,519: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=triCas1 plot triCas1]
 |-
-| 451
+| 437
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas2 triCas2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triCas2 triCas2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 63
 | style='text-align:right'| 62
@@ Line 4,759: / Line 5,533: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=triCas2 plot triCas2]
 |-
-| 452
+| 438
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triMan1 triMan1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000243295.1/ GCF_000243295.1]
+| AllPaths v. R38542
 | style='text-align:right'| 5748
 | style='text-align:right'| 75
@@ Line 4,771: / Line 5,547: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=triMan1 plot triMan1]
 |-
-| 453
+| 439
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1 triSpi1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1 triSpi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000181795.1/ GCF_000181795.1]
+| PCAP v. January 12, 2007
 | style='text-align:right'| 3
 | style='text-align:right'| 55
@@ Line 4,783: / Line 5,561: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=triSpi1 plot triSpi1]
 |-
-| 454
+| 440
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000701005.1/ GCA_000701005.1]
+| SOAPdenovo v. 2
 | style='text-align:right'| 37
 | style='text-align:right'| 138
@@ Line 4,795: / Line 5,575: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=triSui1 plot triSui1]
 |-
-| 456
+| 442
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupChi1 tupChi1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000334495.1/ GCF_000334495.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 914
 | style='text-align:right'| 220.5
@@ Line 4,807: / Line 5,589: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tupChi1 plot tupChi1]
 |-
-| 457
+| 443
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru1 turTru1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru1 turTru1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 112
 | style='text-align:right'| 41.5
@@ Line 4,819: / Line 5,603: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=turTru1 plot turTru1]
 |-
-| 458
+| 444
 | 2011
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=turTru2 turTru2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000151865.2/ GCF_000151865.2]
+| Atlas, Atlas-Link, Atlas-GapFill v. June 2011
 | style='text-align:right'| 5612
 | style='text-align:right'| 70
@@ Line 4,831: / Line 5,617: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=turTru2 plot turTru2]
 |-
-| 459
+| 445
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tytAlb1 tytAlb1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000687205.1/ GCF_000687205.1]
+| SOAPdenovo v. 1.6
 | style='text-align:right'| 2
 | style='text-align:right'| 170
@@ Line 4,843: / Line 5,631: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=tytAlb1 plot tytAlb1]
 |-
-| 460
+| 446
 | 2014
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1 ursMar1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ursMar1 ursMar1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000687225.1/ GCF_000687225.1]
+| SOAPdenovo v. 1.05
 | style='text-align:right'| 205
 | style='text-align:right'| 41
@@ Line 4,855: / Line 5,645: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=ursMar1 plot ursMar1]
 |-
-| 461
+| 447
 | 2007
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=venter1 venter1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=venter1 venter1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 64
 | style='text-align:right'| 411.5
@@ Line 4,867: / Line 5,659: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=venter1 plot venter1]
 |-
-| 462
+| 448
 | 2008
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac1 vicPac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac1 vicPac1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 221
 | style='text-align:right'| 251
@@ Line 4,879: / Line 5,673: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=vicPac1 plot vicPac1]
 |-
-| 463
+| 449
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=vicPac2 vicPac2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000164845.1/ GCF_000164845.1]
+| Newbler v. May-2012
 | style='text-align:right'| 1245
 | style='text-align:right'| 69
@@ Line 4,891: / Line 5,687: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=vicPac2 plot vicPac2]
 |-
-| 464
+| 450
 | 1880
-| vicVic1
+| style='text-align:center;'| vicVic1
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 218
 | style='text-align:right'| 252.5
@@ Line 4,903: / Line 5,701: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=vicVic1 plot vicVic1]
 |-
-| 465
+| 451
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenLae2 xenLae2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenLae2 xenLae2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_001663975.1/ GCF_001663975.1]
+| Meraculous v. May-2013
 | style='text-align:right'| 2660
 | style='text-align:right'| 43
@@ Line 4,915: / Line 5,715: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenLae2 plot xenLae2]
 |-
-| 466
+| 452
 | 2004
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro1 xenTro1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro1 xenTro1]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 140
 | style='text-align:right'| 177.5
@@ Line 4,927: / Line 5,729: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenTro1 plot xenTro1]
 |-
-| 467
+| 453
 | 2005
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro2 xenTro2]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro2 xenTro2]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 116
 | style='text-align:right'| 229.5
@@ Line 4,939: / Line 5,743: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenTro2 plot xenTro2]
 |-
-| 468
+| 454
 | 2009
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro3 xenTro3]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro3 xenTro3]
+| style='text-align:center;'| tbd
+| tbd
 | style='text-align:right'| 116
 | style='text-align:right'| 229.5
@@ Line 4,951: / Line 5,757: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenTro3 plot xenTro3]
 |-
-| 469
+| 455
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro7 xenTro7]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.2/ GCF_000004195.2]
+| ARACHNE v. 20071016_modified
 | style='text-align:right'| 98
 | style='text-align:right'| 82.5
@@ Line 4,963: / Line 5,771: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenTro7 plot xenTro7]
 |-
-| 470
+| 456
 | 2016
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro9 xenTro9]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xenTro9 xenTro9]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000004195.3/ GCF_000004195.3]
+| Meraculous v. May-2013
 | style='text-align:right'| 172
 | style='text-align:right'| 105.5
@@ Line 4,975: / Line 5,785: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xenTro9 plot xenTro9]
 |-
-| 471
+| 457
 | 2012
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=xipMac1 xipMac1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000241075.1/ GCF_000241075.1]
+| PCAP v. 3/30/09; Newbler v. MapAsmResearch-02/17/2010
 | style='text-align:right'| 548
 | style='text-align:right'| 50
@@ Line 4,987: / Line 5,799: @@
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=xipMac1 plot xipMac1]
 |-
-| 473
+| 459
 | 2013
-| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1 zonAlb1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000385455.1/ GCF_000385455.1]
+| Allpaths-LG v. Feb-2013
 | style='text-align:right'| 538
 | style='text-align:right'| 79
@@ Line 4,998: / Line 5,812: @@
 | 990,	1,	[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zonAlb1&position=KB913055:7474487-7476467 KB913055:7474487-7476467]
 | [http://hgwdev-hiram.cse.ucsc.edu/cgi-bin/gapOverlap?db=zonAlb1 plot zonAlb1]
+|}
+== assemblies with zero duplicate gap sequences ==
+{| border='1' style='border-collapse:collapse' class='wikitable sortable'
+|-
+! style='text-align:left;'| count
+! year
+! style='text-align:center;'| dbName
+! style='text-align:center;'| ncbiAsmId
+! style='text-align:center;'| number of gaps
+! style='text-align:center;'| assembly method
+|-
+| 001
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=aciBauTYTH_1 aciBauTYTH_1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000302575.1/ GCF_000302575.1]
+| style='text-align:right;'| 4
+| style='text-align:center;'| tbd
+|-
+| 002
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=afrOth13 afrOth13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 220
+| style='text-align:center;'| tbd
+|-
+| 003
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=apaVit1 apaVit1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000703405.1/ GCF_000703405.1]
+| style='text-align:right;'| 50921
+| style='text-align:center;'| SOAPdenovo v. 1.6
+|-
+| 004
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=borEut13 borEut13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 005
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bunEbo1 bunEbo1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000889155.1/ GCF_000889155.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 006
+| 2010
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap3 caeJap3]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 007
+| 2003
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canFamPoodle1 canFamPoodle1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000181415.1/ GCA_000181415.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 008
+| 2005
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=canHg12 canHg12]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 009
+| 2010
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce10 ce10]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 010
+| 2013
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000002985.6/ GCF_000002985.6]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 011
+| 2004
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce2 ce2]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 5
+| style='text-align:center;'| tbd
+|-
+| 012
+| 2005
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce3 ce3]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 013
+| 2007
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce4 ce4]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 014
+| 2007
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce5 ce5]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 015
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce6 ce6]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 016
+| 2009
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce7 ce7]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 017
+| 2009
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce8 ce8]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 018
+| 2010
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce9 ce9]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 019
+| 2004
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=droMoj1 droMoj1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 020
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eboVir1 eboVir1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 2
+| style='text-align:center;'| tbd
+|-
+| 021
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eboVir3 eboVir3]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 022
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=euaGli13 euaGli13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 19510
+| style='text-align:center;'| tbd
+|-
+| 023
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=eutHer13 eutHer13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 304
+| style='text-align:center;'| tbd
+|-
+| 024
+| 1880
+| style='text-align:center;'| gasAsc0
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000180675.1/ GCA_000180675.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 025
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gliRes13 gliRes13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 39623
+| style='text-align:center;'| tbd
+|-
+| 026
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=gorGor5 gorGor5]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 027
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=homIni14 homIni14]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 028
+| 1880
+| style='text-align:center;'| homNea0
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 872
+| style='text-align:center;'| tbd
+|-
+| 029
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=lauRas13 lauRas13]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 31794
+| style='text-align:center;'| tbd
+|-
+| 030
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=marVir1 marVir1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 031
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1 melHap1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000172435.1/ GCA_000172435.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 032
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc1 melInc1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000180415.1/ GCA_000180415.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 033
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=otoGar1 otoGar1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 034
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac2 priPac2]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCA_000180635.1/ GCA_000180635.1]
+| style='text-align:right;'| 59
+| style='text-align:center;'| tbd
+|-
+| 035
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase0 repBase0]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 2137
+| style='text-align:center;'| tbd
+|-
+| 036
+| 2012
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=repBase1 repBase1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 3623
+| style='text-align:center;'| tbd
+|-
+| 037
+| 1880
+| style='text-align:center;'| repBase2
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 3237
+| style='text-align:center;'| tbd
+|-
+| 038
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=resEbo1 resEbo1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000854085.1/ GCF_000854085.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 039
+| 2016
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=rouAeg1 rouAeg1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_001466805.2/ GCF_001466805.2]
+| style='text-align:right;'| 638
+| style='text-align:center;'| SparseAssembler v. OCTOBER-2015; DBG2OLC v. OCTOBER-2015; LINKS v. 1.5.1; L_RNA_Scaffolder v. OCTOBER-2015; SSPACE v. 3.0
+|-
+| 040
+| 2003
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer1 sacCer1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 041
+| 2008
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer2 sacCer2]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 042
+| 2011
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sacCer3 sacCer3]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000146045.2/ GCF_000146045.2]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 043
+| 1880
+| style='text-align:center;'| salMan0
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 044
+| 2011
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat1 strRat1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 3207
+| style='text-align:center;'| tbd
+|-
+| 045
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=sudEbo1 sudEbo1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000855585.1/ GCF_000855585.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 046
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=taiEbo1 taiEbo1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000888475.1/ GCF_000888475.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 047
+| 2006
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=tupBel1 tupBel1]
+| style='text-align:center;'| tbd
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
+|-
+| 048
+| 2014
+| style='text-align:center;'| [http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=zaiEbo1 zaiEbo1]
+| style='text-align:center;'| [https://www.ncbi.nlm.nih.gov/assembly/GCF_000848505.1/ GCF_000848505.1]
+| style='text-align:right;'| 0
+| style='text-align:center;'| tbd
 |}