Static Page Protocol

Files Destined for the Round Robin and Mirrors (Public Documents)

• The made files are located in /usr/local/apache/htdocs (this is the path used in push requests)
• These files should only be edited in your checkout of the git kent source tree at $HOME/kent/src/hg/htdocs/
• To view these files: http://hgwdev.cse.ucsc.edu/
• The progression of these files is: hgwdev (http://hgwdev.cse.ucsc.edu/) --> hgwbeta (http://hgwbeta.cse.ucsc.edu/) --> RR (http://genome.ucsc.edu/)

• Make Procedure

1. To view your changes on http://hgwdev.cse.ucsc.edu/ on hgwdev in your /cluster/home/$usr/browser directory type: make alpha from $HOME/kent/src/hg/htdocs/
2. If your changes look good, check them in.
3. To have your changes that you made on hgwdev displayed on hgwbeta (http://hgwbeta.cse.ucsc.edu/ in your /cluster/home/$usr/browser directory type on hgwbeta type: make beta from $HOME/kent/src/hg/htdocs/
4. If your changes are ready to go to the RR, then ask the cluster admins for a push request using the made files located here: /usr/local/apache/htdocs

Large Files either Destined for the Round Robin or are Linked on the Genome Wiki (These files were too large to be checked into the main htdocs repository)

• The types of files that are located here help file examples, tutorial examples, or files that are linked to Genome Wiki.
• The made files are located in /usr/local/apache/htdocs (this is the path used in push requests)
• To edit these files, checkout the htdocsExtras repository in your home directory:

git clone yourlogin@hgwdev.cse.ucsc.edu:/data/git/htdocsExtras.git/ htdocsExtras

• Make Procedure

1. To view your changes on http://hgwdev.cse.ucsc.edu/ on hgwdev in your /cluster/home/$usr/htdocsExtras directory type: make alpha
2. If your changes look good, check them in.
3. To have your changes that you made on hgwdev displayed on hgwbeta (http://hgwbeta.cse.ucsc.edu/ in your /cluster/home/$usr/htdocsExtras directory type on hgwbeta type: make beta
4. If your changes are ready to go to the RR, then ask the cluster admins for a push request.

Files Destined for hgdownload

• These files are located in /usr/local/apache/htdocs-hgdownload (this is the path used in push requests)
• To edit non-data files, checkout the hgdownload repository in your home directory:

git clone yourlogin@hgwdev.cse.ucsc.edu:/data/git/hgdownload.git/ hgdownload

• To view these: http://hgdownload-test.cse.ucsc.edu/downloads.html
• The progression for these files is hgdownload-test (http://hgdownload-test.cse.ucsc.edu/downloads.html) --> hgdownload (http://hgdownload.cse.ucsc.edu/downloads.html)
• Make Procedure

1. To view your changes on hgdownload-test (http://hgdownload-test.cse.ucsc.edu/) on hgwdev in /cluster/home/$usr/hgdownload type: make alpha
2. If the changes look good, check them in.
3. When ready to move to hgdownload, email the the cluster admins with a push request.

Files for Internal Use

• These made files are located in genecats
• To edit these files, checkout the repository in your home directory: git clone yourlogin@hgwdev.cse.ucsc.edu:/data/git/genecats.git/ genecats
• To view these files: http://genecats.cse.ucsc.edu/$directory
• There is currently no index page so you will need to specify the directory (ie. http://genecats.cse.ucsc.edu/qa/)
• Make Procedure

1. To view your changes on http://genecats.cse.ucsc.edu/ in this directory /cluster/home/$user/genecats type: make install
2. If your changes look good, check them in.