User contributions for AngieHinrichs
From genomewiki
Jump to navigationJump to search
20 March 2010
- 00:0600:06, 20 March 2010 diff hist +148 ABRF2010 Tutorial →Steps: Added first image with catch-up link
19 March 2010
- 23:5423:54, 19 March 2010 diff hist +56 N File:ABRF2010 ggData.png checkpoint image for demo/tutorial at ABRF 2010 workshop
- 22:5522:55, 19 March 2010 diff hist +39 ABRF2010 Tutorial →Extra
- 22:3222:32, 19 March 2010 diff hist +11 ABRF2010 Tutorial →Steps
- 22:3022:30, 19 March 2010 diff hist +205 ABRF2010 Tutorial →Tutorial: Viewing sequencing data in the UCSC Genome Browser: credits to Charlie
- 22:1022:10, 19 March 2010 diff hist +280 ABRF2010 Tutorial →Where to learn more: added links
- 22:0522:05, 19 March 2010 diff hist +3,756 ABRF2010 Tutorial →Steps: Added details, session links and b0b's SNP regions.
- 18:3418:34, 19 March 2010 diff hist +881 ABRF2010 Tutorial →Steps
- 18:2318:23, 19 March 2010 diff hist +530 ABRF2010 Tutorial →Steps
- 18:0618:06, 19 March 2010 diff hist +50 ABRF2010 Tutorial →Tutorial: Viewing sequencing data in the UCSC Genome Browser
- 18:0518:05, 19 March 2010 diff hist +619 ABRF2010 Tutorial →Steps: added session links
- 17:4517:45, 19 March 2010 diff hist +1 ABRF2010 Tutorial →Steps
- 17:4417:44, 19 March 2010 diff hist +300 ABRF2010 Tutorial →Transforming .sgr into bedGraph for Genome Browser viewing
- 17:3617:36, 19 March 2010 diff hist 0 ABRF2010 Tutorial →Steps
- 17:3517:35, 19 March 2010 diff hist +1 ABRF2010 Tutorial →Transforming .sgr into bedGraph for Genome Browser viewing
- 17:1717:17, 19 March 2010 diff hist +296 ABRF2010 Tutorial →Comparing with UCSC-hosted data
- 17:1417:14, 19 March 2010 diff hist +2 ABRF2010 Tutorial →Where to learn more
- 17:1317:13, 19 March 2010 diff hist +38 ABRF2010 Tutorial →Tutorial: Viewing sequencing data in the UCSC Genome Browser
- 17:1117:11, 19 March 2010 diff hist +1,001 ABRF2010 Tutorial →Viewing alignments in BAM format
- 16:5116:51, 19 March 2010 diff hist +42 ABRF2010 Tutorial →Viewing alignments in BAM format: <nowiki> for fyi-URL; bold for something they should copy-paste.
- 16:3116:31, 19 March 2010 diff hist −66 ABRF2010 Tutorial →Transforming .sgr into bedGraph for Genome Browser viewing: Make URL-to-paste bold + <nowiki>.
- 16:2716:27, 19 March 2010 diff hist +20 ABRF2010 Tutorial →Genome Graphs with .sgr data: Make URLs bold + <nowiki>
18 March 2010
- 16:5216:52, 18 March 2010 diff hist +112 ABRF2010 Tutorial No edit summary
- 05:5805:58, 18 March 2010 diff hist +1,563 ABRF2010 Tutorial filling in some blanks
- 05:0405:04, 18 March 2010 diff hist +4,254 N ABRF2010 Tutorial skeletal first draft.
26 February 2010
- 23:1223:12, 26 February 2010 diff hist +582 Build Environment Variables →USE_BAM: Added KNETFILE_HOOKS.
25 October 2009
- 03:4403:44, 25 October 2009 diff hist +463 UdcFuse added some impl considerations
20 October 2009
- 22:3322:33, 20 October 2009 diff hist +21 m UdcFuse fixed whitespace for readdir prototype
- 22:3122:31, 20 October 2009 diff hist +1,177 UdcFuse Updated method descriptions.
15 October 2009
- 20:5920:59, 15 October 2009 diff hist −207 UdcFuse unbailing - Mark found that kernel handles seek by passing offset to read function.
13 October 2009
- 00:2200:22, 13 October 2009 diff hist +161 UdcFuse FUSE doesn't do seek... bailing. :(
12 October 2009
- 22:2722:27, 12 October 2009 diff hist +2,475 UdcFuse basics of filesystem structure, FUSE methods
- 19:1319:13, 12 October 2009 diff hist +1,692 N UdcFuse intro
5 October 2009
- 20:4620:46, 5 October 2009 diff hist +720 Make your own virtual space Most hgwdev-$USERs have no need to change the central.* settings from the default in cgi-bin/hg.conf.
4 September 2009
- 23:1523:15, 4 September 2009 diff hist +4,431 N Build Environment Variables Initial purpose was simply to describe USE_*, but expanded to cover other shell env vars that common.mk looks at.
- 21:2721:27, 4 September 2009 diff hist +1 Generic Makefile Use L +=
15 September 2008
- 20:0320:03, 15 September 2008 diff hist +890 Migration to hive Added "Who's responsible?" section.
- 19:5019:50, 15 September 2008 diff hist +195 m Migration to hive →GPFS vs. NFS, or how to move directories: clarifications
- 19:4019:40, 15 September 2008 diff hist +5,086 N Migration to hive Draft guidelines for migrating our files from old NFS servers to the new /hive.
27 August 2008
- 23:5323:53, 27 August 2008 diff hist −107 Presentations →2008: Removed Erich's presentation -- concerns about contents.
- 21:1721:17, 27 August 2008 diff hist +610 Presentations Added a few of my presentations from the past few years.
- 20:5720:57, 27 August 2008 diff hist +169 N File:Browsers CSHL Chicken 2005 05.ppt Presentation about the UCSC Genome Browser and Table Browser, at the Chicken Genome meeting at CSHL in May 2005 (just before the Biology of Genomes mtg, not part of it). current
- 20:5420:54, 27 August 2008 diff hist +91 N File:Automation 2006 09 12 v2.ppt Sep. 21, 2006 Genecats presentation about the scripts that ended up in hg/utils/automation. current
- 20:5120:51, 27 August 2008 diff hist +111 N File:Bejerano Lab 2008 03 31.ppt Crash course on making use of the kent/src tree, presented to Gill Bejerano's group at Stanford March 31, 2008. current
- 20:3920:39, 27 August 2008 diff hist +107 Presentations →2008: Added Erigh's 8/27/08 presentation.
- 20:3820:38, 27 August 2008 diff hist +47 N File:Swarm.ppt Erich's presentation at the 8.27.2008 genecats. current
21 April 2008
- 19:4819:48, 21 April 2008 diff hist −120 PCR on cDNA Updated description of seqTable and extFileTable which are now optional (seqFile can be used instead). current
11 April 2008
- 22:5622:56, 11 April 2008 diff hist −82 m PCR on cDNA No edit summary
- 22:5422:54, 11 April 2008 diff hist +6,553 N PCR on cDNA After-the-fact/in-progress design doc.
9 February 2008
- 00:2200:22, 9 February 2008 diff hist +37 DbSNP Track Notes →Track tables and files: -- updated, having built the extras for human,