User contributions for Hiram
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15 April 2018
- 16:1216:12, 15 April 2018 diff hist +179 N File:OpenStackParaHubSetup.sh.txt Corresponding script to go with OpenStackStartParaHub.sh.txt This script is sent to the machine and used there during startup to configure the machine for parasol hub operations.
- 16:1016:10, 15 April 2018 diff hist +160 N File:OpenStackStartParaHub.sh.txt script to start up an Open Stack parasol hub machine instance Also requires the OpenStackParaHubSetup.sh.txt script which configures the machine upon start up.
12 April 2018
- 19:3319:33, 12 April 2018 diff hist 0 File:Hg38.grcIncidentDb.bb Hiram uploaded a new version of File:Hg38.grcIncidentDb.bb
- 02:1302:13, 12 April 2018 diff hist 0 File:NodeReport.sh.txt Hiram uploaded a new version of File:NodeReport.sh.txt
9 April 2018
- 17:1717:17, 9 April 2018 diff hist +188 Parasol job control system No parasol jobs in parasol jobs
- 17:1517:15, 9 April 2018 diff hist +321 Whole genome alignment howto adding note to reference the doChainNetBlastz.pl script
8 April 2018
- 02:2602:26, 8 April 2018 diff hist 0 112 fly pair wise alignments reorg % location current
- 02:1002:10, 8 April 2018 diff hist +17,405 112 fly pair wise alignments genome and taxId links
7 April 2018
- 23:5923:59, 7 April 2018 diff hist +6,272 112 fly pair wise alignments with accession link
- 23:5523:55, 7 April 2018 diff hist +13,848 N 112 fly pair wise alignments initial contents needs out links
6 April 2018
- 21:1321:13, 6 April 2018 diff hist +1,632 DoBlastzChainNet.pl adding how it works
- 20:5920:59, 6 April 2018 diff hist +1,961 DoBlastzChainNet.pl adding four categories of DEF files
- 20:2420:24, 6 April 2018 diff hist +53 m DoBlastzChainNet.pl use rsync instead of ftp
- 20:2020:20, 6 April 2018 diff hist 0 m DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 20:1320:13, 6 April 2018 diff hist +136 Parasol job control system add bedSingleCover.pl to binaries
- 20:1220:12, 6 April 2018 diff hist +343 DoBlastzChainNet.pl indicate lastz binary is in UCSC downloads, add bedSingleCover.pl
- 20:0820:08, 6 April 2018 diff hist −2 DoBlastzChainNet.pl lastz-1.04.00 binary is now in UCSC downloads
- 16:3316:33, 6 April 2018 diff hist 0 File:Mm9.grcIncidentDb.bb Hiram uploaded a new version of File:Mm9.grcIncidentDb.bb
- 16:3316:33, 6 April 2018 diff hist 0 File:Mm10.grcIncidentDb.bb Hiram uploaded a new version of File:Mm10.grcIncidentDb.bb
- 06:0406:04, 6 April 2018 diff hist −123 m DoBlastzChainNet.pl →PATH setup
- 06:0206:02, 6 April 2018 diff hist +1,487 DoBlastzChainNet.pl note track hub files
- 05:3605:36, 6 April 2018 diff hist +45 m DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 05:3405:34, 6 April 2018 diff hist +30 m DoBlastzChainNet.pl →Obtain genome sequences
- 05:3205:32, 6 April 2018 diff hist +123 m DoBlastzChainNet.pl →Prerequisites
- 05:3105:31, 6 April 2018 diff hist −4 m DoBlastzChainNet.pl →PATH setup
- 05:3005:30, 6 April 2018 diff hist +3,276 DoBlastzChainNet.pl Reciprocal Best
- 05:1005:10, 6 April 2018 diff hist 0 m DoBlastzChainNet.pl →perform alignment
- 05:0705:07, 6 April 2018 diff hist +3,119 DoBlastzChainNet.pl monitor progress
- 04:1004:10, 6 April 2018 diff hist +965 DoBlastzChainNet.pl run alignment
- 04:0404:04, 6 April 2018 diff hist +1,033 DoBlastzChainNet.pl lastz DEF file
- 03:5403:54, 6 April 2018 diff hist +2,390 DoBlastzChainNet.pl →Obtain genome sequences
- 03:0603:06, 6 April 2018 diff hist +403 DoBlastzChainNet.pl adding genome sequences
- 02:5302:53, 6 April 2018 diff hist 0 File:ParasolInstall.sh.txt Hiram uploaded a new version of File:ParasolInstall.sh.txt current
- 02:5102:51, 6 April 2018 diff hist +29 Parasol job control system →PATH setup
- 02:5002:50, 6 April 2018 diff hist +639 DoBlastzChainNet.pl adding working directory
- 02:4102:41, 6 April 2018 diff hist +659 DoBlastzChainNet.pl →PATH setup
- 02:3602:36, 6 April 2018 diff hist +38 m DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 00:5100:51, 6 April 2018 diff hist +4 DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 00:5100:51, 6 April 2018 diff hist +119 DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 00:4900:49, 6 April 2018 diff hist +53 DoBlastzChainNet.pl adding category tags
- 00:4700:47, 6 April 2018 diff hist +14 Parasol job control system →PATH setup
- 00:4600:46, 6 April 2018 diff hist +653 Parasol job control system →Parasol installation
- 00:4000:40, 6 April 2018 diff hist +35 m DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 00:3800:38, 6 April 2018 diff hist +391 DoBlastzChainNet.pl →Install scripts and kent command line utilities
- 00:0300:03, 6 April 2018 diff hist +554 DoBlastzChainNet.pl →Install scripts and kent command line utilities
5 April 2018
- 23:2423:24, 5 April 2018 diff hist +197 DoBlastzChainNet.pl adding parasol mention
- 23:2123:21, 5 April 2018 diff hist +787 N DoBlastzChainNet.pl initial contents
- 20:2320:23, 5 April 2018 diff hist +48 m Parasol job control system →Initialize node instances
- 20:1420:14, 5 April 2018 diff hist +960 Parasol job control system show the nodeReport.sh script
- 16:3316:33, 5 April 2018 diff hist 0 File:Mm9.grcIncidentDb.bb Hiram uploaded a new version of File:Mm9.grcIncidentDb.bb