GeoFor1 conservation alignment
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see also
- Medium ground finch 7-way GeoFor1 Genome size statistics
- Medium ground finch 7-way GeoFor1 conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| URL to assembly sequence |
UCSC db name/ genome-preview browser |
Scientific name/ assembly information |
Common name |
assembly date | source version |
Repeat Masker |
Window Masker |
chain on geoFor1 |
% of geoFor1 matched (chainLink table) |
|---|---|---|---|---|---|---|---|---|---|
| 01 | geoFor1 | Geospiza fortis | Medium ground finch | Apr. 2012 (GeoFor_1.0/geoFor1) | Beijing Genomics Institute | 2012-07-26 | 2012-07-26 | N/A | N/A |
| 02 | taeGut1 | Taeniopygia guttata | Zebra finch | Jul. 2008 (WUGSC 3.2.4/taeGut1) | Washington University taeGut1 | 2009-08-14 | 2009-08-14 | 2012-07-31 | 92.532% |
| 03 | galGal4 | Gallus gallus | Chicken | Nov. 2011 (ICGSC Gallus_gallus-4.0/galGal4) | ICGSC Gallus_gallus-4.0 (GCA_000002315.2) | 2012-01-04 | 2012-01-04 | 2012-07-30 | 70.718% |
| 04 | melGal1 | Meleagris gallopavo | Turkey | Dec. 2009 (TGC Turkey_2.01/melGal1) | TGC (NCBI Project ID: 10805, Accession: GCA_000146605.1) | 2010-11-04 | N/A | 2012-07-29 | 67.079% |
| 05 | melUnd1 | Melopsittacus undulatus | Budgerigar | Sep. 2011 (WUSTL v6.3/melUnd1) | WUSTL Melopsittacus undulatus Budgerigar Version 6.3 (GCA_000238935.1) | 2012-03-27 | 2012-03-28 | 2012-07-29 | 80.650% |
| 06 | hg19 | Homo sapiens | Human | Feb. 2009 (GRCh37/hg19) | GRCh37 Genome Reference Consortium Human Reference 37 (GCA_000001405.1) | 2009-08-15 | 2012-04-19 | 2012-07-29 | 8.504% |
| 07 | mm10 | Mus musculus | Mouse | Dec. 2011 (GRCm38/mm10) | Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) | 2012-02-06 | 2012-02-07 | 2012-07-29 | 7.709% |
