Hg19 Genome size statistics

see also

• Hg19 conservation alignment
• Hg19 conservation lastz parameters
• Hg18 44way alignment
• Hg18 44way blastz parameters
• Hg18 genome size statistics

statistics collected from UCSC 2bit files

• N bases == unknown bases in the assembly marked by 'N'
• non-N bases == called bases in the assembly
• total size == all bases in assembly, N and non-N
• % masked == masked either with WindowMasker or RepeatMasker plus TRF simple repeats
• % of hg19 matched (chainLink table) == featureBits hg19 chain<Db>Link == alignment coverage