112 fly pair wise alignments: Difference between revisions

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(with accession link)
Line 13: Line 13:
|-
|-
! 1
! 1
| GCF_000001215.4
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001215.4/ GCF_000001215.4]
| Release_6_plus_ISO1_MT
| Release_6_plus_ISO1_MT
| fruit fly
| fruit fly
Line 24: Line 24:
|-
|-
! 2
! 2
| GCF_000005215.3
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005215.3/ GCF_000005215.3]
| dsec_caf1
| dsec_caf1
| flies
| flies
Line 35: Line 35:
|-
|-
! 3
! 3
| GCF_000754195.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000754195.2/ GCF_000754195.2]
| ASM75419v2
| ASM75419v2
| flies
| flies
Line 46: Line 46:
|-
|-
! 4
! 4
| GCF_000005975.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005975.2/ GCF_000005975.2]
| dyak_caf1
| dyak_caf1
| flies
| flies
Line 57: Line 57:
|-
|-
! 5
! 5
| GCF_000005135.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005135.1/ GCF_000005135.1]
| dere_caf1
| dere_caf1
| flies
| flies
Line 68: Line 68:
|-
|-
! 6
! 6
| GCF_000224235.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224235.1/ GCF_000224235.1]
| Dtak_2.0
| Dtak_2.0
| flies
| flies
Line 79: Line 79:
|-
|-
! 7
! 7
| GCF_000224195.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224195.1/ GCF_000224195.1]
| Dele_2.0
| Dele_2.0
| flies
| flies
Line 90: Line 90:
|-
|-
! 8
! 8
| GCF_000236325.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236325.1/ GCF_000236325.1]
| Deug_2.0
| Deug_2.0
| flies
| flies
Line 101: Line 101:
|-
|-
! 9
! 9
| GCF_000233415.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000233415.1/ GCF_000233415.1]
| Dbia_2.0
| Dbia_2.0
| flies
| flies
Line 112: Line 112:
|-
|-
! 10
! 10
| GCF_000236305.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236305.1/ GCF_000236305.1]
| Drho_2.0
| Drho_2.0
| flies
| flies
Line 123: Line 123:
|-
|-
! 11
! 11
| GCF_000220665.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000220665.1/ GCF_000220665.1]
| Dfic_2.0
| Dfic_2.0
| flies
| flies
Line 134: Line 134:
|-
|-
! 12
! 12
| GCF_000472105.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000472105.1/ GCF_000472105.1]
| Dsuzukii.v01
| Dsuzukii.v01
| flies
| flies
Line 145: Line 145:
|-
|-
! 13
! 13
| GCF_002093755.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_002093755.1/ GCF_002093755.1]
| Dser1.0
| Dser1.0
| flies
| flies
Line 156: Line 156:
|-
|-
! 14
! 14
| GCF_000224215.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000224215.1/ GCF_000224215.1]
| Dkik_2.0
| Dkik_2.0
| flies
| flies
Line 167: Line 167:
|-
|-
! 15
! 15
| GCF_000005115.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005115.1/ GCF_000005115.1]
| dana_caf1
| dana_caf1
| flies
| flies
Line 178: Line 178:
|-
|-
! 16
! 16
| GCF_000236285.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000236285.1/ GCF_000236285.1]
| Dbip_2.0
| Dbip_2.0
| flies
| flies
Line 189: Line 189:
|-
|-
! 17
! 17
| GCF_002217835.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_002217835.1/ GCF_002217835.1]
| Dobs_1.0
| Dobs_1.0
| flies
| flies
Line 200: Line 200:
|-
|-
! 18
! 18
| GCF_000001765.3
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000001765.3/ GCF_000001765.3]
| Dpse_3.0
| Dpse_3.0
| flies
| flies
Line 211: Line 211:
|-
|-
! 19
! 19
| GCF_000269505.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000269505.1/ GCF_000269505.1]
| DroMir_2.2
| DroMir_2.2
| flies
| flies
Line 222: Line 222:
|-
|-
! 20
! 20
| GCF_000005195.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005195.2/ GCF_000005195.2]
| dper_caf1
| dper_caf1
| flies
| flies
Line 233: Line 233:
|-
|-
! 21
! 21
| GCA_002749795.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002749795.1/ GCA_002749795.1]
| Dsub_1.0
| Dsub_1.0
| flies
| flies
Line 244: Line 244:
|-
|-
! 22
! 22
| GCF_000005925.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005925.1/ GCF_000005925.1]
| dwil_caf1
| dwil_caf1
| flies
| flies
Line 255: Line 255:
|-
|-
! 23
! 23
| GCF_000005245.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005245.1/ GCF_000005245.1]
| dvir_caf1
| dvir_caf1
| flies
| flies
Line 266: Line 266:
|-
|-
! 24
! 24
| GCF_000005155.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005155.2/ GCF_000005155.2]
| dgri_caf1
| dgri_caf1
| flies
| flies
Line 277: Line 277:
|-
|-
! 25
! 25
| GCF_000005175.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005175.2/ GCF_000005175.2]
| dmoj_caf1
| dmoj_caf1
| flies
| flies
Line 288: Line 288:
|-
|-
! 26
! 26
| GCF_002780465.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_002780465.1/ GCF_002780465.1]
| ASM278046v1
| ASM278046v1
| flies
| flies
Line 299: Line 299:
|-
|-
! 27
! 27
| GCA_001245395.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001245395.1/ GCA_001245395.1]
| D._americana_H5_strain_genome_assembly
| D._americana_H5_strain_genome_assembly
| flies
| flies
Line 310: Line 310:
|-
|-
! 28
! 28
| GCA_000298335.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000298335.1/ GCA_000298335.1]
| DroAlb_1.0
| DroAlb_1.0
| flies
| flies
Line 321: Line 321:
|-
|-
! 29
! 29
| GCF_001277935.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001277935.1/ GCF_001277935.1]
| ASM127793v1
| ASM127793v1
| flies
| flies
Line 332: Line 332:
|-
|-
! 30
! 30
| GCF_001654025.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001654025.1/ GCF_001654025.1]
| ASM165402v1
| ASM165402v1
| flies
| flies
Line 343: Line 343:
|-
|-
! 31
! 31
| GCA_002222885.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002222885.1/ GCA_002222885.1]
| ASM222288v1
| ASM222288v1
| flies
| flies
Line 354: Line 354:
|-
|-
! 32
! 32
| GCA_001752445.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001752445.1/ GCA_001752445.1]
| ZP_IN_1.0
| ZP_IN_1.0
| flies
| flies
Line 365: Line 365:
|-
|-
! 33
! 33
| GCF_001654015.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001654015.1/ GCF_001654015.1]
| ASM165401v1
| ASM165401v1
| flies
| flies
Line 376: Line 376:
|-
|-
! 34
! 34
| GCA_001014445.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014445.1/ GCA_001014445.1]
| ASM101444v1
| ASM101444v1
| flies
| flies
Line 387: Line 387:
|-
|-
! 35
! 35
| GCA_001014415.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014415.1/ GCA_001014415.1]
| ASM101441v1
| ASM101441v1
| flies
| flies
Line 398: Line 398:
|-
|-
! 36
! 36
| GCA_002237135.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002237135.1/ GCA_002237135.1]
| Tel_dalmanni_2A_v1.0
| Tel_dalmanni_2A_v1.0
| flies
| flies
Line 409: Line 409:
|-
|-
! 37
! 37
| GCF_001687245.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001687245.1/ GCF_001687245.1]
| Rhagoletis_zephyria_1.0
| Rhagoletis_zephyria_1.0
| snowberry fruit fly
| snowberry fruit fly
Line 420: Line 420:
|-
|-
! 38
! 38
| GCF_000699065.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000699065.1/ GCF_000699065.1]
| Lcup_2.0
| Lcup_2.0
| Australian sheep blowfly
| Australian sheep blowfly
Line 431: Line 431:
|-
|-
! 39
! 39
| GCF_001853355.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001853355.1/ GCF_001853355.1]
| ASM185335v1
| ASM185335v1
| flies
| flies
Line 442: Line 442:
|-
|-
! 40
! 40
| GCF_001188975.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001188975.1/ GCF_001188975.1]
| gapfilled_joined_lt9474.gt500.covgt10
| gapfilled_joined_lt9474.gt500.covgt10
| olive fruit fly
| olive fruit fly
Line 453: Line 453:
|-
|-
! 41
! 41
| GCF_000806345.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000806345.1/ GCF_000806345.1]
| ASM80634v1
| ASM80634v1
| melon fly
| melon fly
Line 464: Line 464:
|-
|-
! 42
! 42
| GCA_001735585.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001735585.1/ GCA_001735585.1]
| ASM173558v1
| ASM173558v1
| black blowfly
| black blowfly
Line 475: Line 475:
|-
|-
! 43
! 43
| GCF_000347755.3
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000347755.3/ GCF_000347755.3]
| Ccap_2.1
| Ccap_2.1
| Mediterranean fruit fly
| Mediterranean fruit fly
Line 486: Line 486:
|-
|-
! 44
! 44
| GCA_000695345.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000695345.1/ GCA_000695345.1]
| Assembly_2.2_of_Bactrocera_tryoni_genome
| Assembly_2.2_of_Bactrocera_tryoni_genome
| Queensland fruit fly
| Queensland fruit fly
Line 497: Line 497:
|-
|-
! 45
! 45
| GCF_000789215.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000789215.1/ GCF_000789215.1]
| ASM78921v2
| ASM78921v2
| oriental fruit fly
| oriental fruit fly
Line 508: Line 508:
|-
|-
! 46
! 46
| GCF_001015335.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001015335.1/ GCF_001015335.1]
| Stomoxys_calcitrans-1.0.1
| Stomoxys_calcitrans-1.0.1
| stable fly
| stable fly
Line 519: Line 519:
|-
|-
! 47
! 47
| GCA_000688715.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000688715.1/ GCA_000688715.1]
| Glossina_pallidipes-1.0.3
| Glossina_pallidipes-1.0.3
| tsetse fly
| tsetse fly
Line 530: Line 530:
|-
|-
! 48
! 48
| GCA_000671735.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000671735.1/ GCA_000671735.1]
| Glossina_fuscipes-3.0.2
| Glossina_fuscipes-3.0.2
| tsetse fly
| tsetse fly
Line 541: Line 541:
|-
|-
! 49
! 49
| GCA_000671755.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000671755.1/ GCA_000671755.1]
| Glossina_brevipalpis_1.0.3
| Glossina_brevipalpis_1.0.3
| tsetse fly
| tsetse fly
Line 552: Line 552:
|-
|-
! 50
! 50
| GCA_001077435.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001077435.1/ GCA_001077435.1]
| ASM107743v1
| ASM107743v1
| tsetse fly
| tsetse fly
Line 563: Line 563:
|-
|-
! 51
! 51
| GCA_000688735.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000688735.1/ GCA_000688735.1]
| Glossina_austeni-1.0.3
| Glossina_austeni-1.0.3
| tsetse fly
| tsetse fly
Line 574: Line 574:
|-
|-
! 52
! 52
| GCA_000818775.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000818775.1/ GCA_000818775.1]
| Glossina_palpalis_gambiensis-2.0.1
| Glossina_palpalis_gambiensis-2.0.1
| tsetse fly
| tsetse fly
Line 585: Line 585:
|-
|-
! 53
! 53
| GCA_001014675.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014675.1/ GCA_001014675.1]
| ASM101467v1
| ASM101467v1
| flies
| flies
Line 596: Line 596:
|-
|-
! 54
! 54
| GCA_001014835.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014835.1/ GCA_001014835.1]
| ASM101483v1
| ASM101483v1
| common green bottle fly
| common green bottle fly
Line 607: Line 607:
|-
|-
! 55
! 55
| GCA_001014515.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014515.1/ GCA_001014515.1]
| ASM101451v1
| ASM101451v1
| tsetse fly
| tsetse fly
Line 618: Line 618:
|-
|-
! 56
! 56
| GCA_001017275.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001017275.1/ GCA_001017275.1]
| ASM101727v1
| ASM101727v1
| urban bluebottle blowfly
| urban bluebottle blowfly
Line 629: Line 629:
|-
|-
! 57
! 57
| GCF_001876365.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_001876365.2/ GCF_001876365.2]
| canu_80X_arrow2.2
| canu_80X_arrow2.2
| Asian tiger mosquito
| Asian tiger mosquito
Line 640: Line 640:
|-
|-
! 58
! 58
| GCA_001015235.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001015235.1/ GCA_001015235.1]
| ASM101523v1
| ASM101523v1
| flies
| flies
Line 651: Line 651:
|-
|-
! 59
! 59
| GCA_001932985.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001932985.1/ GCA_001932985.1]
| 200kmer_750.trimmed
| 200kmer_750.trimmed
| flies
| flies
Line 662: Line 662:
|-
|-
! 60
! 60
| GCA_001014575.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014575.1/ GCA_001014575.1]
| ASM101457v1
| ASM101457v1
| flies
| flies
Line 673: Line 673:
|-
|-
! 61
! 61
| GCF_002204515.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_002204515.2/ GCF_002204515.2]
| AaegL5.0
| AaegL5.0
| yellow fever mosquito
| yellow fever mosquito
Line 684: Line 684:
|-
|-
! 62
! 62
| GCF_000209185.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000209185.1/ GCF_000209185.1]
| CulPip1.0
| CulPip1.0
| southern house mosquito
| southern house mosquito
Line 695: Line 695:
|-
|-
! 63
! 63
| GCA_001542645.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001542645.1/ GCA_001542645.1]
| ASM154264v1
| ASM154264v1
| African malaria mosquito
| African malaria mosquito
Line 706: Line 706:
|-
|-
! 64
! 64
| GCF_000005575.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCF_000005575.2/ GCF_000005575.2]
| AgamP3
| AgamP3
| African malaria mosquito
| African malaria mosquito
Line 717: Line 717:
|-
|-
! 65
! 65
| GCA_001015175.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001015175.1/ GCA_001015175.1]
| ASM101517v1
| ASM101517v1
| flies
| flies
Line 728: Line 728:
|-
|-
! 66
! 66
| GCA_002091835.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002091835.1/ GCA_002091835.1]
| ASM209183v1
| ASM209183v1
| mosquitos
| mosquitos
Line 739: Line 739:
|-
|-
! 67
! 67
| GCA_001017515.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001017515.1/ GCA_001017515.1]
| ASM101751v1
| ASM101751v1
| flies
| flies
Line 750: Line 750:
|-
|-
! 68
! 68
| GCA_000473845.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000473845.2/ GCA_000473845.2]
| Anop_meru_MAF_V1
| Anop_meru_MAF_V1
| mosquitos
| mosquitos
Line 761: Line 761:
|-
|-
! 69
! 69
| GCA_000349145.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349145.1/ GCA_000349145.1]
| Anop_diru_WRAIR2_V1
| Anop_diru_WRAIR2_V1
| mosquitos
| mosquitos
Line 772: Line 772:
|-
|-
! 70
! 70
| GCA_000349185.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349185.1/ GCA_000349185.1]
| Anop_arab_DONG5_A_V1
| Anop_arab_DONG5_A_V1
| mosquitos
| mosquitos
Line 783: Line 783:
|-
|-
! 71
! 71
| GCA_000473505.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000473505.1/ GCA_000473505.1]
| Anop_atro_EBRO_V1
| Anop_atro_EBRO_V1
| mosquitos
| mosquitos
Line 794: Line 794:
|-
|-
! 72
! 72
| GCA_000349105.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349105.1/ GCA_000349105.1]
| Anop_epir_epiroticus2_V1
| Anop_epir_epiroticus2_V1
| mosquitos
| mosquitos
Line 805: Line 805:
|-
|-
! 73
! 73
| GCA_000349065.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349065.1/ GCA_000349065.1]
| Anop_quad_QUAD4_A_V1
| Anop_quad_QUAD4_A_V1
| mosquitos
| mosquitos
Line 816: Line 816:
|-
|-
! 74
! 74
| GCA_000300775.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000300775.2/ GCA_000300775.2]
| ASM30077v2
| ASM30077v2
| Asian malaria mosquito
| Asian malaria mosquito
Line 827: Line 827:
|-
|-
! 75
! 75
| GCA_000473445.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000473445.2/ GCA_000473445.2]
| Anop_fara_FAR1_V2
| Anop_fara_FAR1_V2
| mosquitos
| mosquitos
Line 838: Line 838:
|-
|-
! 76
! 76
| GCA_000349025.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349025.1/ GCA_000349025.1]
| Anop_mini_MINIMUS1_V1
| Anop_mini_MINIMUS1_V1
| mosquitos
| mosquitos
Line 849: Line 849:
|-
|-
! 77
! 77
| GCA_000349085.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349085.1/ GCA_000349085.1]
| Anop_fune_FUMOZ_V1
| Anop_fune_FUMOZ_V1
| African malaria mosquito
| African malaria mosquito
Line 860: Line 860:
|-
|-
! 78
! 78
| GCA_000473525.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000473525.2/ GCA_000473525.2]
| Anop_mela_CM1001059_A_V2
| Anop_mela_CM1001059_A_V2
| mosquitos
| mosquitos
Line 871: Line 871:
|-
|-
! 79
! 79
| GCA_000150765.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000150765.1/ GCA_000150765.1]
| m5
| m5
| African malaria mosquito
| African malaria mosquito
Line 882: Line 882:
|-
|-
! 80
! 80
| GCA_001014945.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014945.1/ GCA_001014945.1]
| ASM101494v1
| ASM101494v1
| mothmidge
| mothmidge
Line 893: Line 893:
|-
|-
! 81
! 81
| GCA_000472065.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000472065.2/ GCA_000472065.2]
| Anop_sine_SINENSIS_V1
| Anop_sine_SINENSIS_V1
| mosquitos
| mosquitos
Line 904: Line 904:
|-
|-
! 82
! 82
| GCA_000262795.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000262795.1/ GCA_000262795.1]
| Ppap_1.0
| Ppap_1.0
| flies
| flies
Line 915: Line 915:
|-
|-
! 83
! 83
| GCA_000473375.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000473375.1/ GCA_000473375.1]
| Anop_culi_species_A-37_1_V1
| Anop_culi_species_A-37_1_V1
| mosquitos
| mosquitos
Line 926: Line 926:
|-
|-
! 84
! 84
| GCA_001014335.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014335.1/ GCA_001014335.1]
| ASM101433v1
| ASM101433v1
| flies
| flies
Line 937: Line 937:
|-
|-
! 85
! 85
| GCA_900258525.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_900258525.2/ GCA_900258525.2]
| Cson_Genome_version_2.0
| Cson_Genome_version_2.0
| flies
| flies
Line 948: Line 948:
|-
|-
! 86
! 86
| GCA_000349125.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349125.2/ GCA_000349125.2]
| Anop_albi_ALBI9_A_V2
| Anop_albi_ALBI9_A_V2
| mosquitos
| mosquitos
Line 959: Line 959:
|-
|-
! 87
! 87
| GCA_000349165.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000349165.1/ GCA_000349165.1]
| Anop_chri_ACHKN1017_V1
| Anop_chri_ACHKN1017_V1
| mosquitos
| mosquitos
Line 970: Line 970:
|-
|-
! 88
! 88
| GCA_002091845.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002091845.1/ GCA_002091845.1]
| ASM209184v1
| ASM209184v1
| mosquitos
| mosquitos
Line 981: Line 981:
|-
|-
! 89
! 89
| GCA_002846955.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_002846955.1/ GCA_002846955.1]
| A_aquasalis_v1.0
| A_aquasalis_v1.0
| mosquitos
| mosquitos
Line 992: Line 992:
|-
|-
! 90
! 90
| GCA_001014895.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014895.1/ GCA_001014895.1]
| ASM101489v1
| ASM101489v1
| flies
| flies
Line 1,003: Line 1,003:
|-
|-
! 91
! 91
| GCA_000211455.3
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000211455.3/ GCA_000211455.3]
| A_darlingi_v1
| A_darlingi_v1
| American malaria mosquito
| American malaria mosquito
Line 1,014: Line 1,014:
|-
|-
! 92
! 92
| GCA_001017455.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001017455.1/ GCA_001017455.1]
| ASM101745v1
| ASM101745v1
| grey fleshfly
| grey fleshfly
Line 1,025: Line 1,025:
|-
|-
! 93
! 93
| GCA_001015115.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001015115.1/ GCA_001015115.1]
| ASM101511v1
| ASM101511v1
| flies
| flies
Line 1,036: Line 1,036:
|-
|-
! 94
! 94
| GCA_000956215.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000956215.1/ GCA_000956215.1]
| ASM95621v1
| ASM95621v1
| mosquitos
| mosquitos
Line 1,047: Line 1,047:
|-
|-
! 95
! 95
| GCA_001015215.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001015215.1/ GCA_001015215.1]
| ASM101521v1
| ASM101521v1
| flies
| flies
Line 1,058: Line 1,058:
|-
|-
! 96
! 96
| GCA_000956275.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000956275.1/ GCA_000956275.1]
| ASM95627v1
| ASM95627v1
| mosquitos
| mosquitos
Line 1,069: Line 1,069:
|-
|-
! 97
! 97
| GCA_000775305.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000775305.1/ GCA_000775305.1]
| ASM77530v1
| ASM77530v1
| flies
| flies
Line 1,080: Line 1,080:
|-
|-
! 98
! 98
| GCA_000956255.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000956255.1/ GCA_000956255.1]
| ASM95625v1
| ASM95625v1
| mosquitos
| mosquitos
Line 1,091: Line 1,091:
|-
|-
! 99
! 99
| GCA_900005825.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_900005825.1/ GCA_900005825.1]
| CLUMA_1.0
| CLUMA_1.0
| flies
| flies
Line 1,102: Line 1,102:
|-
|-
! 100
! 100
| GCA_000149185.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000149185.1/ GCA_000149185.1]
| Mdes_1.0
| Mdes_1.0
| Hessian fly
| Hessian fly
Line 1,113: Line 1,113:
|-
|-
! 101
! 101
| GCA_001047195.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001047195.1/ GCA_001047195.1]
| ASM104719v1
| ASM104719v1
| flies
| flies
Line 1,124: Line 1,124:
|-
|-
! 102
! 102
| GCA_000786525.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000786525.1/ GCA_000786525.1]
| CT01
| CT01
| flies
| flies
Line 1,135: Line 1,135:
|-
|-
! 103
! 103
| GCA_001014505.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014505.1/ GCA_001014505.1]
| ASM101450v1
| ASM101450v1
| flies
| flies
Line 1,146: Line 1,146:
|-
|-
! 104
! 104
| GCA_001014935.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014935.1/ GCA_001014935.1]
| ASM101493v1
| ASM101493v1
| celery leafminer
| celery leafminer
Line 1,157: Line 1,157:
|-
|-
! 105
! 105
| GCA_001015145.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001015145.1/ GCA_001015145.1]
| ASM101514v1
| ASM101514v1
| flies
| flies
Line 1,168: Line 1,168:
|-
|-
! 106
! 106
| GCA_000439205.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000439205.1/ GCA_000439205.1]
| Anili1
| Anili1
| mosquitos
| mosquitos
Line 1,179: Line 1,179:
|-
|-
! 107
! 107
| GCA_001014815.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014815.1/ GCA_001014815.1]
| ASM101481v1
| ASM101481v1
| flies
| flies
Line 1,190: Line 1,190:
|-
|-
! 108
! 108
| GCA_001017535.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001017535.1/ GCA_001017535.1]
| ASM101753v1
| ASM101753v1
| flies
| flies
Line 1,201: Line 1,201:
|-
|-
! 109
! 109
| GCA_001014875.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014875.1/ GCA_001014875.1]
| ASM101487v1
| ASM101487v1
| flies
| flies
Line 1,212: Line 1,212:
|-
|-
! 110
! 110
| GCA_000341915.2
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_000341915.2/ GCA_000341915.2]
| ASM34191v2
| ASM34191v2
| flies
| flies
Line 1,223: Line 1,223:
|-
|-
! 111
! 111
| GCA_001014665.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014665.1/ GCA_001014665.1]
| ASM101466v1
| ASM101466v1
| flies
| flies
Line 1,234: Line 1,234:
|-
|-
! 112
! 112
| GCA_001014425.1
| [http://www.ncbi.nlm.nih.gov/assembly/GCA_001014425.1/ GCA_001014425.1]
| ASM101442v1
| ASM101442v1
| flies
| flies

Revision as of 23:59, 7 April 2018

112 fly pair-wise alignments to D. melanogaster/dm6
order
count 		accession assembly
name 		common
name 		scientific
name 		clade taxId coverage reciprocal best
coverage 		syntenic
coverage
1 GCF_000001215.4 Release_6_plus_ISO1_MT fruit fly Drosophila melanogaster Drosophila 7227 98.737 98.643 97.667
2 GCF_000005215.3 dsec_caf1 flies Drosophila sechellia Drosophila 7238 82.016 76.817 74.497
3 GCF_000754195.2 ASM75419v2 flies Drosophila simulans Drosophila 7240 81.926 76.897 75.562
4 GCF_000005975.2 dyak_caf1 flies Drosophila yakuba Drosophila 7245 79.951 75.423 72.041
5 GCF_000005135.1 dere_caf1 flies Drosophila erecta Drosophila 7220 79.216 74.711 73.011
6 GCF_000224235.1 Dtak_2.0 flies Drosophila takahashii Drosophila 29030 74.939 71.163 68.355
7 GCF_000224195.1 Dele_2.0 flies Drosophila elegans Drosophila 30023 74.867 71.190 67.623
8 GCF_000236325.1 Deug_2.0 flies Drosophila eugracilis Drosophila 29029 74.686 71.266 69.625
9 GCF_000233415.1 Dbia_2.0 flies Drosophila biarmipes Drosophila 125945 74.478 70.862 65.245
10 GCF_000236305.1 Drho_2.0 flies Drosophila rhopaloa Drosophila 1041015 74.383 70.404 62.588
11 GCF_000220665.1 Dfic_2.0 flies Drosophila ficusphila Drosophila 30025 74.168 70.423 68.704
12 GCF_000472105.1 Dsuzukii.v01 flies Drosophila suzukii Drosophila 28584 74.036 70.127 62.212
13 GCF_002093755.1 Dser1.0 flies Drosophila serrata Drosophila 7274 70.419 67.226 61.397
14 GCF_000224215.1 Dkik_2.0 flies Drosophila kikkawai Drosophila 30033 70.073 66.396 62.887
15 GCF_000005115.1 dana_caf1 flies Drosophila ananassae Drosophila 7217 65.806 62.422 57.253
16 GCF_000236285.1 Dbip_2.0 flies Drosophila bipectinata Drosophila 42026 65.394 62.053 57.596
17 GCF_002217835.1 Dobs_1.0 flies Drosophila obscura Drosophila 7282 61.561 58.325 54.856
18 GCF_000001765.3 Dpse_3.0 flies Drosophila pseudoobscura pseudoobscura Drosophila 46245 59.426 56.346 50.672
19 GCF_000269505.1 DroMir_2.2 flies Drosophila miranda Drosophila 7229 58.891 56.001 51.810
20 GCF_000005195.2 dper_caf1 flies Drosophila persimilis Drosophila 7234 57.869 54.929 50.052
21 GCA_002749795.1 Dsub_1.0 flies Drosophila subobscura Drosophila 7241 55.249 53.549 50.225
22 GCF_000005925.1 dwil_caf1 flies Drosophila willistoni Drosophila 7260 51.228 48.305 39.093
23 GCF_000005245.1 dvir_caf1 flies Drosophila virilis Drosophila 7244 48.970 45.648 39.374
24 GCF_000005155.2 dgri_caf1 flies Drosophila grimshawi Drosophila 7222 47.666 45.098 38.022
25 GCF_000005175.2 dmoj_caf1 flies Drosophila mojavensis Drosophila 7230 47.168 43.637 37.633
26 GCF_002780465.1 ASM278046v1 flies Drosophila hydei Drosophila 7224 45.605 43.146 39.090
27 GCA_001245395.1 D._americana_H5_strain_genome_assembly flies Drosophila americana Drosophila 40366 45.382 42.585 23.381
28 GCA_000298335.1 DroAlb_1.0 flies Drosophila albomicans Drosophila 7291 44.346 41.158 25.201
29 GCF_001277935.1 ASM127793v1 flies Drosophila busckii Drosophila 30019 42.220 39.281 31.758
30 GCF_001654025.1 ASM165402v1 flies Drosophila arizonae Drosophila 7263 41.792 39.022 32.657
31 GCA_002222885.1 ASM222288v1 flies Drosophila nasuta Drosophila 42062 39.549 36.390 7.560
32 GCA_001752445.1 ZP_IN_1.0 flies Zaprionus indianus flies 76712 36.928 33.048 6.376
33 GCF_001654015.1 ASM165401v1 flies Drosophila navojoa Drosophila 7232 36.286 33.214 26.266
34 GCA_001014445.1 ASM101444v1 flies Scaptodrosophila lebanonensis flies 7225 36.017 33.165 10.587
35 GCA_001014415.1 ASM101441v1 flies Phortica variegata flies 462259 24.774 22.301 5.843
36 GCA_002237135.1 Tel_dalmanni_2A_v1.0 flies Teleopsis dalmanni flies 139649 23.293 20.362 5.645
37 GCF_001687245.1 Rhagoletis_zephyria_1.0 snowberry fruit fly Rhagoletis zephyria other 28612 21.196 17.813 2.689
38 GCF_000699065.1 Lcup_2.0 Australian sheep blowfly Lucilia cuprina other 7375 20.785 17.867 5.586
39 GCF_001853355.1 ASM185335v1 flies Bactrocera latifrons flies 174628 20.469 17.499 7.177
40 GCF_001188975.1 gapfilled_joined_lt9474.gt500.covgt10 olive fruit fly Bactrocera oleae other 104688 20.400 17.503 6.304
41 GCF_000806345.1 ASM80634v1 melon fly Bactrocera cucurbitae other 28588 20.252 17.366 8.183
42 GCA_001735585.1 ASM173558v1 black blowfly Phormia regina other 7380 20.158 17.311 1.107
43 GCF_000347755.3 Ccap_2.1 Mediterranean fruit fly Ceratitis capitata other 7213 19.997 17.255 7.370
44 GCA_000695345.1 Assembly_2.2_of_Bactrocera_tryoni_genome Queensland fruit fly Bactrocera tryoni other 59916 19.523 16.269 3.969
45 GCF_000789215.1 ASM78921v2 oriental fruit fly Bactrocera dorsalis other 27457 19.222 16.309 6.919
46 GCF_001015335.1 Stomoxys_calcitrans-1.0.1 stable fly Stomoxys calcitrans other 35570 18.152 15.680 3.734
47 GCA_000688715.1 Glossina_pallidipes-1.0.3 tsetse fly Glossina pallidipes other 7398 17.101 14.994 5.616
48 GCA_000671735.1 Glossina_fuscipes-3.0.2 tsetse fly Glossina fuscipes fuscipes other 201502 17.078 15.035 5.045
49 GCA_000671755.1 Glossina_brevipalpis_1.0.3 tsetse fly Glossina brevipalpis other 37001 17.022 14.980 5.521
50 GCA_001077435.1 ASM107743v1 tsetse fly Glossina morsitans morsitans other 37546 16.954 14.868 2.119
51 GCA_000688735.1 Glossina_austeni-1.0.3 tsetse fly Glossina austeni other 7395 16.948 14.847 5.064
52 GCA_000818775.1 Glossina_palpalis_gambiensis-2.0.1 tsetse fly Glossina palpalis gambiensis other 67801 16.827 14.768 4.540
53 GCA_001014675.1 ASM101467v1 flies Ephydra gracilis flies 1577615 16.643 14.428 0.911
54 GCA_001014835.1 ASM101483v1 common green bottle fly Lucilia sericata other 13632 15.766 13.320 0.519
55 GCA_001014515.1 ASM101451v1 tsetse fly Glossina morsitans other 7394 15.733 13.720 1.238
56 GCA_001017275.1 ASM101727v1 urban bluebottle blowfly Calliphora vicina other 7373 15.621 12.708 0.349
57 GCF_001876365.2 canu_80X_arrow2.2 Asian tiger mosquito Aedes albopictus other 7160 15.172 12.698 0.828
58 GCA_001015235.1 ASM101523v1 flies Sphyracephala brevicornis flies 139677 14.969 12.187 0.369
59 GCA_001932985.1 200kmer_750.trimmed flies Proctacanthus coquilletti flies 1717472 14.594 12.338 2.120
60 GCA_001014575.1 ASM101457v1 flies Themira minor flies 292402 14.206 11.272 0.825
61 GCF_002204515.2 AaegL5.0 yellow fever mosquito Aedes aegypti other 7159 14.028 11.507 0.847
62 GCF_000209185.1 CulPip1.0 southern house mosquito Culex quinquefasciatus other 7176 13.421 10.996 0.942
63 GCA_001542645.1 ASM154264v1 African malaria mosquito Anopheles gambiae Anopheles 7165 13.337 10.786 0.876
64 GCF_000005575.2 AgamP3 African malaria mosquito Anopheles gambiae str. PEST Anopheles 180454 13.328 10.657 1.126
65 GCA_001015175.1 ASM101517v1 flies Megaselia abdita flies 88686 13.126 10.704 0.252
66 GCA_002091835.1 ASM209183v1 mosquitos Anopheles maculatus Anopheles 74869 13.114 10.911 0.821
67 GCA_001017515.1 ASM101751v1 flies Tephritis californica flies 594049 12.995 10.479 0.067
68 GCA_000473845.2 Anop_meru_MAF_V1 mosquitos Anopheles merus Anopheles 30066 12.901 10.341 1.016
69 GCA_000349145.1 Anop_diru_WRAIR2_V1 mosquitos Anopheles dirus Anopheles 7168 12.779 10.236 1.099
70 GCA_000349185.1 Anop_arab_DONG5_A_V1 mosquitos Anopheles arabiensis Anopheles 7173 12.738 10.298 1.126
71 GCA_000473505.1 Anop_atro_EBRO_V1 mosquitos Anopheles atroparvus Anopheles 41427 12.705 10.228 1.099
72 GCA_000349105.1 Anop_epir_epiroticus2_V1 mosquitos Anopheles epiroticus Anopheles 199890 12.650 10.196 0.932
73 GCA_000349065.1 Anop_quad_QUAD4_A_V1 mosquitos Anopheles quadriannulatus Anopheles 34691 12.514 10.160 1.057
74 GCA_000300775.2 ASM30077v2 Asian malaria mosquito Anopheles stephensi Anopheles 30069 12.374 10.069 1.042
75 GCA_000473445.2 Anop_fara_FAR1_V2 mosquitos Anopheles farauti Anopheles 69004 12.374 10.105 1.064
76 GCA_000349025.1 Anop_mini_MINIMUS1_V1 mosquitos Anopheles minimus Anopheles 112268 12.353 10.054 1.089
77 GCA_000349085.1 Anop_fune_FUMOZ_V1 African malaria mosquito Anopheles funestus Anopheles 62324 12.236 10.013 0.956
78 GCA_000473525.2 Anop_mela_CM1001059_A_V2 mosquitos Anopheles melas Anopheles 34690 12.182 9.866 0.468
79 GCA_000150765.1 m5 African malaria mosquito Anopheles gambiae M Anopheles 377271 12.160 9.623 0.872
80 GCA_001014945.1 ASM101494v1 mothmidge Clogmia albipunctata other 85120 12.098 9.885 0.376
81 GCA_000472065.2 Anop_sine_SINENSIS_V1 mosquitos Anopheles sinensis Anopheles 74873 12.094 9.680 0.653
82 GCA_000262795.1 Ppap_1.0 flies Phlebotomus papatasi flies 29031 12.066 9.731 0.301
83 GCA_000473375.1 Anop_culi_species_A-37_1_V1 mosquitos Anopheles culicifacies Anopheles 139723 11.996 9.816 0.573
84 GCA_001014335.1 ASM101433v1 flies Coboldia fuscipes flies 170625 11.908 10.130 0.797
85 GCA_900258525.2 Cson_Genome_version_2.0 flies Culicoides sonorensis flies 179676 11.882 10.108 0.497
86 GCA_000349125.2 Anop_albi_ALBI9_A_V2 mosquitos Anopheles albimanus Anopheles 7167 11.850 9.826 1.017
87 GCA_000349165.1 Anop_chri_ACHKN1017_V1 mosquitos Anopheles christyi Anopheles 43041 11.794 9.620 0.420
88 GCA_002091845.1 ASM209184v1 mosquitos Anopheles cracens Anopheles 123217 11.692 9.661 0.646
89 GCA_002846955.1 A_aquasalis_v1.0 mosquitos Anopheles aquasalis Anopheles 42839 11.625 9.589 0.628
90 GCA_001014895.1 ASM101489v1 flies Hermetia illucens flies 343691 11.575 9.548 0.049
91 GCA_000211455.3 A_darlingi_v1 American malaria mosquito Anopheles darlingi Anopheles 43151 11.465 9.624 0.776
92 GCA_001017455.1 ASM101745v1 grey fleshfly Neobellieria bullata other 7385 11.431 8.641 0.074
93 GCA_001015115.1 ASM101511v1 flies Eutreta diana flies 1577624 11.427 9.111 0.049
94 GCA_000956215.1 ASM95621v1 mosquitos Anopheles farauti No. 4 Anopheles 59191 11.042 8.957 0.387
95 GCA_001015215.1 ASM101521v1 flies Holcocephala fusca flies 1577617 10.901 9.276 0.266
96 GCA_000956275.1 ASM95627v1 mosquitos Anopheles koliensis Anopheles 30065 10.841 8.788 0.253
97 GCA_000775305.1 ASM77530v1 flies Belgica antarctica flies 315563 10.737 9.031 0.588
98 GCA_000956255.1 ASM95625v1 mosquitos Anopheles punctulatus Anopheles 30068 10.686 8.649 0.327
99 GCA_900005825.1 CLUMA_1.0 flies Clunio marinus flies 568069 10.684 9.102 0.770
100 GCA_000149185.1 Mdes_1.0 Hessian fly Mayetiola destructor other 39758 10.512 8.836 0.608
101 GCA_001047195.1 ASM104719v1 flies Sarcophagidae sp. BV-2014 flies 1577618 10.061 7.957 0.053
102 GCA_000786525.1 CT01 flies Chironomus tentans flies 7153 9.943 8.534 0.484
103 GCA_001014505.1 ASM101450v1 flies Chironomus riparius flies 315576 9.683 8.277 0.306
104 GCA_001014935.1 ASM101493v1 celery leafminer Liriomyza trifolii other 198433 9.358 6.972 0.017
105 GCA_001015145.1 ASM101514v1 flies Eristalis dimidiata flies 1352481 9.259 7.114 0.058
106 GCA_000439205.1 Anili1 mosquitos Anopheles nili Anopheles 185578 9.202 6.899 0.045
107 GCA_001014815.1 ASM101481v1 flies Chaoborus trivitattus flies 204567 8.821 6.974 0.076
108 GCA_001017535.1 ASM101753v1 flies Tipula oleracea flies 312236 8.632 6.960 0.231
109 GCA_001014875.1 ASM101487v1 flies Condylostylus patibulatus flies 1577614 8.158 6.303 0.024
110 GCA_000341915.2 ASM34191v2 flies Megaselia scalaris flies 36166 8.143 6.166 0.139
111 GCA_001014665.1 ASM101466v1 flies Trupanea jonesi flies 1582032 7.450 5.115 0.016
112 GCA_001014425.1 ASM101442v1 flies Trichoceridae sp. BV-2014 flies 1577620 3.974 2.904 0.006
Retrieved from "https://genomewiki.ucsc.edu/index.php?title=112_fly_pair_wise_alignments&oldid=24725"