112 fly pair wise alignments

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112 fly pair-wise alignments to D. melanogaster/dm6
order
count
accession assembly
name
common
name
scientific
name
clade taxId coverage reciprocal best
coverage
syntenic
coverage
1 GCF_000001215.4 Release_6_plus_ISO1_MT fruit fly Drosophila melanogaster Drosophila 7227 98.737 98.643 97.667
2 GCF_000005215.3 dsec_caf1 flies Drosophila sechellia Drosophila 7238 82.016 76.817 74.497
3 GCF_000754195.2 ASM75419v2 flies Drosophila simulans Drosophila 7240 81.926 76.897 75.562
4 GCF_000005975.2 dyak_caf1 flies Drosophila yakuba Drosophila 7245 79.951 75.423 72.041
5 GCF_000005135.1 dere_caf1 flies Drosophila erecta Drosophila 7220 79.216 74.711 73.011
6 GCF_000224235.1 Dtak_2.0 flies Drosophila takahashii Drosophila 29030 74.939 71.163 68.355
7 GCF_000224195.1 Dele_2.0 flies Drosophila elegans Drosophila 30023 74.867 71.190 67.623
8 GCF_000236325.1 Deug_2.0 flies Drosophila eugracilis Drosophila 29029 74.686 71.266 69.625
9 GCF_000233415.1 Dbia_2.0 flies Drosophila biarmipes Drosophila 125945 74.478 70.862 65.245
10 GCF_000236305.1 Drho_2.0 flies Drosophila rhopaloa Drosophila 1041015 74.383 70.404 62.588
11 GCF_000220665.1 Dfic_2.0 flies Drosophila ficusphila Drosophila 30025 74.168 70.423 68.704
12 GCF_000472105.1 Dsuzukii.v01 flies Drosophila suzukii Drosophila 28584 74.036 70.127 62.212
13 GCF_002093755.1 Dser1.0 flies Drosophila serrata Drosophila 7274 70.419 67.226 61.397
14 GCF_000224215.1 Dkik_2.0 flies Drosophila kikkawai Drosophila 30033 70.073 66.396 62.887
15 GCF_000005115.1 dana_caf1 flies Drosophila ananassae Drosophila 7217 65.806 62.422 57.253
16 GCF_000236285.1 Dbip_2.0 flies Drosophila bipectinata Drosophila 42026 65.394 62.053 57.596
17 GCF_002217835.1 Dobs_1.0 flies Drosophila obscura Drosophila 7282 61.561 58.325 54.856
18 GCF_000001765.3 Dpse_3.0 flies Drosophila pseudoobscura pseudoobscura Drosophila 46245 59.426 56.346 50.672
19 GCF_000269505.1 DroMir_2.2 flies Drosophila miranda Drosophila 7229 58.891 56.001 51.810
20 GCF_000005195.2 dper_caf1 flies Drosophila persimilis Drosophila 7234 57.869 54.929 50.052
21 GCA_002749795.1 Dsub_1.0 flies Drosophila subobscura Drosophila 7241 55.249 53.549 50.225
22 GCF_000005925.1 dwil_caf1 flies Drosophila willistoni Drosophila 7260 51.228 48.305 39.093
23 GCF_000005245.1 dvir_caf1 flies Drosophila virilis Drosophila 7244 48.970 45.648 39.374
24 GCF_000005155.2 dgri_caf1 flies Drosophila grimshawi Drosophila 7222 47.666 45.098 38.022
25 GCF_000005175.2 dmoj_caf1 flies Drosophila mojavensis Drosophila 7230 47.168 43.637 37.633
26 GCF_002780465.1 ASM278046v1 flies Drosophila hydei Drosophila 7224 45.605 43.146 39.090
27 GCA_001245395.1 D._americana_H5_strain_genome_assembly flies Drosophila americana Drosophila 40366 45.382 42.585 23.381
28 GCA_000298335.1 DroAlb_1.0 flies Drosophila albomicans Drosophila 7291 44.346 41.158 25.201
29 GCF_001277935.1 ASM127793v1 flies Drosophila busckii Drosophila 30019 42.220 39.281 31.758
30 GCF_001654025.1 ASM165402v1 flies Drosophila arizonae Drosophila 7263 41.792 39.022 32.657
31 GCA_002222885.1 ASM222288v1 flies Drosophila nasuta Drosophila 42062 39.549 36.390 7.560
32 GCA_001752445.1 ZP_IN_1.0 flies Zaprionus indianus flies 76712 36.928 33.048 6.376
33 GCF_001654015.1 ASM165401v1 flies Drosophila navojoa Drosophila 7232 36.286 33.214 26.266
34 GCA_001014445.1 ASM101444v1 flies Scaptodrosophila lebanonensis flies 7225 36.017 33.165 10.587
35 GCA_001014415.1 ASM101441v1 flies Phortica variegata flies 462259 24.774 22.301 5.843
36 GCA_002237135.1 Tel_dalmanni_2A_v1.0 flies Teleopsis dalmanni flies 139649 23.293 20.362 5.645
37 GCF_001687245.1 Rhagoletis_zephyria_1.0 snowberry fruit fly Rhagoletis zephyria other 28612 21.196 17.813 2.689
38 GCF_000699065.1 Lcup_2.0 Australian sheep blowfly Lucilia cuprina other 7375 20.785 17.867 5.586
39 GCF_001853355.1 ASM185335v1 flies Bactrocera latifrons flies 174628 20.469 17.499 7.177
40 GCF_001188975.1 gapfilled_joined_lt9474.gt500.covgt10 olive fruit fly Bactrocera oleae other 104688 20.400 17.503 6.304
41 GCF_000806345.1 ASM80634v1 melon fly Bactrocera cucurbitae other 28588 20.252 17.366 8.183
42 GCA_001735585.1 ASM173558v1 black blowfly Phormia regina other 7380 20.158 17.311 1.107
43 GCF_000347755.3 Ccap_2.1 Mediterranean fruit fly Ceratitis capitata other 7213 19.997 17.255 7.370
44 GCA_000695345.1 Assembly_2.2_of_Bactrocera_tryoni_genome Queensland fruit fly Bactrocera tryoni other 59916 19.523 16.269 3.969
45 GCF_000789215.1 ASM78921v2 oriental fruit fly Bactrocera dorsalis other 27457 19.222 16.309 6.919
46 GCF_001015335.1 Stomoxys_calcitrans-1.0.1 stable fly Stomoxys calcitrans other 35570 18.152 15.680 3.734
47 GCA_000688715.1 Glossina_pallidipes-1.0.3 tsetse fly Glossina pallidipes other 7398 17.101 14.994 5.616
48 GCA_000671735.1 Glossina_fuscipes-3.0.2 tsetse fly Glossina fuscipes fuscipes other 201502 17.078 15.035 5.045
49 GCA_000671755.1 Glossina_brevipalpis_1.0.3 tsetse fly Glossina brevipalpis other 37001 17.022 14.980 5.521
50 GCA_001077435.1 ASM107743v1 tsetse fly Glossina morsitans morsitans other 37546 16.954 14.868 2.119
51 GCA_000688735.1 Glossina_austeni-1.0.3 tsetse fly Glossina austeni other 7395 16.948 14.847 5.064
52 GCA_000818775.1 Glossina_palpalis_gambiensis-2.0.1 tsetse fly Glossina palpalis gambiensis other 67801 16.827 14.768 4.540
53 GCA_001014675.1 ASM101467v1 flies Ephydra gracilis flies 1577615 16.643 14.428 0.911
54 GCA_001014835.1 ASM101483v1 common green bottle fly Lucilia sericata other 13632 15.766 13.320 0.519
55 GCA_001014515.1 ASM101451v1 tsetse fly Glossina morsitans other 7394 15.733 13.720 1.238
56 GCA_001017275.1 ASM101727v1 urban bluebottle blowfly Calliphora vicina other 7373 15.621 12.708 0.349
57 GCF_001876365.2 canu_80X_arrow2.2 Asian tiger mosquito Aedes albopictus other 7160 15.172 12.698 0.828
58 GCA_001015235.1 ASM101523v1 flies Sphyracephala brevicornis flies 139677 14.969 12.187 0.369
59 GCA_001932985.1 200kmer_750.trimmed flies Proctacanthus coquilletti flies 1717472 14.594 12.338 2.120
60 GCA_001014575.1 ASM101457v1 flies Themira minor flies 292402 14.206 11.272 0.825
61 GCF_002204515.2 AaegL5.0 yellow fever mosquito Aedes aegypti other 7159 14.028 11.507 0.847
62 GCF_000209185.1 CulPip1.0 southern house mosquito Culex quinquefasciatus other 7176 13.421 10.996 0.942
63 GCA_001542645.1 ASM154264v1 African malaria mosquito Anopheles gambiae Anopheles 7165 13.337 10.786 0.876
64 GCF_000005575.2 AgamP3 African malaria mosquito Anopheles gambiae str. PEST Anopheles 180454 13.328 10.657 1.126
65 GCA_001015175.1 ASM101517v1 flies Megaselia abdita flies 88686 13.126 10.704 0.252
66 GCA_002091835.1 ASM209183v1 mosquitos Anopheles maculatus Anopheles 74869 13.114 10.911 0.821
67 GCA_001017515.1 ASM101751v1 flies Tephritis californica flies 594049 12.995 10.479 0.067
68 GCA_000473845.2 Anop_meru_MAF_V1 mosquitos Anopheles merus Anopheles 30066 12.901 10.341 1.016
69 GCA_000349145.1 Anop_diru_WRAIR2_V1 mosquitos Anopheles dirus Anopheles 7168 12.779 10.236 1.099
70 GCA_000349185.1 Anop_arab_DONG5_A_V1 mosquitos Anopheles arabiensis Anopheles 7173 12.738 10.298 1.126
71 GCA_000473505.1 Anop_atro_EBRO_V1 mosquitos Anopheles atroparvus Anopheles 41427 12.705 10.228 1.099
72 GCA_000349105.1 Anop_epir_epiroticus2_V1 mosquitos Anopheles epiroticus Anopheles 199890 12.650 10.196 0.932
73 GCA_000349065.1 Anop_quad_QUAD4_A_V1 mosquitos Anopheles quadriannulatus Anopheles 34691 12.514 10.160 1.057
74 GCA_000300775.2 ASM30077v2 Asian malaria mosquito Anopheles stephensi Anopheles 30069 12.374 10.069 1.042
75 GCA_000473445.2 Anop_fara_FAR1_V2 mosquitos Anopheles farauti Anopheles 69004 12.374 10.105 1.064
76 GCA_000349025.1 Anop_mini_MINIMUS1_V1 mosquitos Anopheles minimus Anopheles 112268 12.353 10.054 1.089
77 GCA_000349085.1 Anop_fune_FUMOZ_V1 African malaria mosquito Anopheles funestus Anopheles 62324 12.236 10.013 0.956
78 GCA_000473525.2 Anop_mela_CM1001059_A_V2 mosquitos Anopheles melas Anopheles 34690 12.182 9.866 0.468
79 GCA_000150765.1 m5 African malaria mosquito Anopheles gambiae M Anopheles 377271 12.160 9.623 0.872
80 GCA_001014945.1 ASM101494v1 mothmidge Clogmia albipunctata other 85120 12.098 9.885 0.376
81 GCA_000472065.2 Anop_sine_SINENSIS_V1 mosquitos Anopheles sinensis Anopheles 74873 12.094 9.680 0.653
82 GCA_000262795.1 Ppap_1.0 flies Phlebotomus papatasi flies 29031 12.066 9.731 0.301
83 GCA_000473375.1 Anop_culi_species_A-37_1_V1 mosquitos Anopheles culicifacies Anopheles 139723 11.996 9.816 0.573
84 GCA_001014335.1 ASM101433v1 flies Coboldia fuscipes flies 170625 11.908 10.130 0.797
85 GCA_900258525.2 Cson_Genome_version_2.0 flies Culicoides sonorensis flies 179676 11.882 10.108 0.497
86 GCA_000349125.2 Anop_albi_ALBI9_A_V2 mosquitos Anopheles albimanus Anopheles 7167 11.850 9.826 1.017
87 GCA_000349165.1 Anop_chri_ACHKN1017_V1 mosquitos Anopheles christyi Anopheles 43041 11.794 9.620 0.420
88 GCA_002091845.1 ASM209184v1 mosquitos Anopheles cracens Anopheles 123217 11.692 9.661 0.646
89 GCA_002846955.1 A_aquasalis_v1.0 mosquitos Anopheles aquasalis Anopheles 42839 11.625 9.589 0.628
90 GCA_001014895.1 ASM101489v1 flies Hermetia illucens flies 343691 11.575 9.548 0.049
91 GCA_000211455.3 A_darlingi_v1 American malaria mosquito Anopheles darlingi Anopheles 43151 11.465 9.624 0.776
92 GCA_001017455.1 ASM101745v1 grey fleshfly Neobellieria bullata other 7385 11.431 8.641 0.074
93 GCA_001015115.1 ASM101511v1 flies Eutreta diana flies 1577624 11.427 9.111 0.049
94 GCA_000956215.1 ASM95621v1 mosquitos Anopheles farauti No. 4 Anopheles 59191 11.042 8.957 0.387
95 GCA_001015215.1 ASM101521v1 flies Holcocephala fusca flies 1577617 10.901 9.276 0.266
96 GCA_000956275.1 ASM95627v1 mosquitos Anopheles koliensis Anopheles 30065 10.841 8.788 0.253
97 GCA_000775305.1 ASM77530v1 flies Belgica antarctica flies 315563 10.737 9.031 0.588
98 GCA_000956255.1 ASM95625v1 mosquitos Anopheles punctulatus Anopheles 30068 10.686 8.649 0.327
99 GCA_900005825.1 CLUMA_1.0 flies Clunio marinus flies 568069 10.684 9.102 0.770
100 GCA_000149185.1 Mdes_1.0 Hessian fly Mayetiola destructor other 39758 10.512 8.836 0.608
101 GCA_001047195.1 ASM104719v1 flies Sarcophagidae sp. BV-2014 flies 1577618 10.061 7.957 0.053
102 GCA_000786525.1 CT01 flies Chironomus tentans flies 7153 9.943 8.534 0.484
103 GCA_001014505.1 ASM101450v1 flies Chironomus riparius flies 315576 9.683 8.277 0.306
104 GCA_001014935.1 ASM101493v1 celery leafminer Liriomyza trifolii other 198433 9.358 6.972 0.017
105 GCA_001015145.1 ASM101514v1 flies Eristalis dimidiata flies 1352481 9.259 7.114 0.058
106 GCA_000439205.1 Anili1 mosquitos Anopheles nili Anopheles 185578 9.202 6.899 0.045
107 GCA_001014815.1 ASM101481v1 flies Chaoborus trivitattus flies 204567 8.821 6.974 0.076
108 GCA_001017535.1 ASM101753v1 flies Tipula oleracea flies 312236 8.632 6.960 0.231
109 GCA_001014875.1 ASM101487v1 flies Condylostylus patibulatus flies 1577614 8.158 6.303 0.024
110 GCA_000341915.2 ASM34191v2 flies Megaselia scalaris flies 36166 8.143 6.166 0.139
111 GCA_001014665.1 ASM101466v1 flies Trupanea jonesi flies 1582032 7.450 5.115 0.016
112 GCA_001014425.1 ASM101442v1 flies Trichoceridae sp. BV-2014 flies 1577620 3.974 2.904 0.006