Ce11 26-way conservation lastz parameters: Difference between revisions

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<TABLE BORDER=0>
<TABLE BORDER=0>
<TR><TD>The default<BR>scoring matrix is:</TD><TD WIDTH=42>&nbsp;</TD>
<TR><TD>The default Q<BR>scoring matrix is:</TD><TD WIDTH=42>&nbsp;</TD></TR>
<TD>The HoxD55<BR>scoring matrix is:</TD><TD WIDTH=42>&nbsp;</TD><TD>The human-chimp.v2<BR>scoring matrix is:</TD></TR>


<TR><TD>
<TR><TD>
Line 21: Line 20:
</TABLE>
</TABLE>
O=400 E=30
O=400 E=30
</TD><TD WIDTH=42>&nbsp;</TD><TD><TABLE BORDER=1>
<TR><TH>&nbsp;</TH><TH>A</TH><TH>C</TH><TH>G</TH><TH>T</TH></TR>
<TR><TH>A</TH><TD>91</TD><TD>-90</TD><TD>-25</TD><TD>-100</TD></TR>
<TR><TH>C</TH><TD>-90</TD><TD>100</TD><TD>-100</TD><TD>-25</TD></TR>
<TR><TH>G</TH><TD>-25</TD><TD>-100</TD><TD>100</TD><TD>-90</TD></TR>
<TR><TH>T</TH><TD>-100</TD><TD>-25</TD><TD>-90</TD><TD>91</TD></TR>
</TABLE>
O=400 E=30
</TD><TD WIDTH=42>&nbsp;</TD><TD><TABLE BORDER=1>
<TR><TH>&nbsp;</TH><TH>A</TH><TH>C</TH><TH>G</TH><TH>T</TH></TR>
<TR><TH>A</TH><TD>90</TD><TD>-330</TD><TD>-236</TD><TD>-356</TD></TR>
<TR><TH>C</TH><TD>-330</TD><TD>100</TD><TD>-318</TD><TD>-236</TD></TR>
<TR><TH>G</TH><TD>-236</TD><TD>-318</TD><TD>100</TD><TD>-330</TD></TR>
<TR><TH>T</TH><TD>-356</TD><TD>-236</TD><TD>-330</TD><TD>90</TD></TR>
</TABLE>
O=600 E=150
</TD>
</TD>
</TR></TABLE>
</TR></TABLE>
Line 53: Line 36:
</TR>
</TR>
<TR>
<TR>
   <TH>C. japonica&nbsp;caeJap4</TH>
   <TH>C. sp. 5 ju800&nbsp;caeSp51</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-06-25</TD><TD ALIGN=RIGHT>27.709%</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>40.332%</TD>
   <TD ALIGN=RIGHT>19.533%</TD></TR>
   <TD ALIGN=RIGHT>31.721%</TD></TR>
<TR>
<TR>
   <TH>C. brenneri&nbsp;caePb3</TH>
   <TH>C. brenneri&nbsp;caePb3</TH>
Line 70: Line 53:
   <TD>2015-07-02</TD><TD ALIGN=RIGHT>41.715%</TD>
   <TD>2015-07-02</TD><TD ALIGN=RIGHT>41.715%</TD>
   <TD ALIGN=RIGHT>33.416%</TD></TR>
   <TD ALIGN=RIGHT>33.416%</TD></TR>
<TR>
  <TH>C. briggsae&nbsp;cb4</TH>
  <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
  <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
  <TD>2015-07-01</TD><TD ALIGN=RIGHT>39.384%</TD>
  <TD ALIGN=RIGHT>36.204%</TD></TR>
<TR>
<TR>
   <TH>C. tropicalis&nbsp;caeSp111</TH>
   <TH>C. tropicalis&nbsp;caeSp111</TH>
Line 77: Line 66:
   <TD ALIGN=RIGHT>47.362%</TD></TR>
   <TD ALIGN=RIGHT>47.362%</TD></TR>
<TR>
<TR>
   <TH>C. briggsae&nbsp;cb4</TH>
   <TH>C. japonica&nbsp;caeJap4</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-01</TD><TD ALIGN=RIGHT>39.384%</TD>
   <TD>2015-06-25</TD><TD ALIGN=RIGHT>27.709%</TD>
   <TD ALIGN=RIGHT>36.204%</TD></TR>
   <TD ALIGN=RIGHT>19.533%</TD></TR>
<TR>
<TR>
   <TH>C. angaria&nbsp;caeAng2</TH>
   <TH>C. angaria&nbsp;caeAng2</TH>
Line 89: Line 78:
   <TD ALIGN=RIGHT>20.987%</TD></TR>
   <TD ALIGN=RIGHT>20.987%</TD></TR>
<TR>
<TR>
   <TH>C. sp. 5 ju800&nbsp;caeSp51</TH>
   <TH>P. pacificus&nbsp;priPac3</TH>
  <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
  <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
  <TD>2015-07-01</TD><TD ALIGN=RIGHT>6.308%</TD>
  <TD ALIGN=RIGHT>4.534%</TD></TR>
<TR>
  <TH>P. exspectatus&nbsp;priExs1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>40.332%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>6.222%</TD>
   <TD ALIGN=RIGHT>31.721%</TD></TR>
   <TD ALIGN=RIGHT>4.321%</TD></TR>
<TR>
<TR>
   <TH>H. bacteriophora/m31e&nbsp;hetBac1</TH>
   <TH>Pine wood nematode&nbsp;burXyl1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>10.486%</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>6.291%</TD>
   <TD ALIGN=RIGHT>13.556%</TD></TR>
   <TD ALIGN=RIGHT>8.293%</TD></TR>
<TR>
<TR>
   <TH>Microworm&nbsp;panRed1</TH>
   <TH>A. ceylanicum&nbsp;ancCey1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-01</TD><TD ALIGN=RIGHT>6.585%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>9.736%</TD>
   <TD ALIGN=RIGHT>10.359%</TD></TR>
   <TD ALIGN=RIGHT>3.237%</TD></TR>
<TR>
<TR>
   <TH>Threadworm&nbsp;strRat2</TH>
   <TH>Barber pole worm&nbsp;haeCon2</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>5.669%</TD>
   <TD>2015-07-07</TD><TD ALIGN=RIGHT>8.936%</TD>
   <TD ALIGN=RIGHT>11.848%</TD></TR>
   <TD ALIGN=RIGHT>3.405%</TD></TR>
<TR>
<TR>
   <TH>Pig roundworm&nbsp;ascSuu1</TH>
   <TH>N. americanus&nbsp;necAme1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.722%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>8.902%</TD>
   <TD ALIGN=RIGHT>2.224%</TD></TR>
   <TD ALIGN=RIGHT>4.115%</TD></TR>
<TR>
<TR>
   <TH>Barber pole worm&nbsp;haeCon2</TH>
   <TH>Microworm&nbsp;panRed1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-07</TD><TD ALIGN=RIGHT>8.936%</TD>
   <TD>2015-07-01</TD><TD ALIGN=RIGHT>6.585%</TD>
   <TD ALIGN=RIGHT>3.405%</TD></TR>
   <TD ALIGN=RIGHT>10.359%</TD></TR>
<TR>
<TR>
   <TH>A. ceylanicum&nbsp;ancCey1</TH>
   <TH>H. bacteriophora/m31e&nbsp;hetBac1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>9.736%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>10.486%</TD>
   <TD ALIGN=RIGHT>3.237%</TD></TR>
   <TD ALIGN=RIGHT>13.556%</TD></TR>
<TR>
<TR>
   <TH>N. americanus&nbsp;necAme1</TH>
   <TH>Pig roundworm&nbsp;ascSuu1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>8.902%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.722%</TD>
   <TD ALIGN=RIGHT>4.115%</TD></TR>
   <TD ALIGN=RIGHT>2.224%</TD></TR>
<TR>
<TR>
   <TH>P. exspectatus&nbsp;priExs1</TH>
   <TH>Threadworm&nbsp;strRat2</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>6.222%</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>5.669%</TD>
   <TD ALIGN=RIGHT>4.321%</TD></TR>
   <TD ALIGN=RIGHT>11.848%</TD></TR>
<TR>
<TR>
   <TH>P. pacificus&nbsp;priPac3</TH>
   <TH>Trichinella&nbsp;triSpi1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-01</TD><TD ALIGN=RIGHT>6.308%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>2.848%</TD>
   <TD ALIGN=RIGHT>4.534%</TD></TR>
   <TD ALIGN=RIGHT>4.678%</TD></TR>
<TR>
<TR>
   <TH>Pine wood nematode&nbsp;burXyl1</TH>
   <TH>Whipworm&nbsp;triSui1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-09</TD><TD ALIGN=RIGHT>6.291%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>2.917%</TD>
   <TD ALIGN=RIGHT>8.293%</TD></TR>
   <TD ALIGN=RIGHT>3.714%</TD></TR>
<TR>
<TR>
   <TH>Filarial worm&nbsp;bruMal2</TH>
   <TH>M. incognita&nbsp;melInc2</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-08-11</TD><TD ALIGN=RIGHT>5.065%</TD>
   <TD>2015-06-30</TD><TD ALIGN=RIGHT>3.516%</TD>
   <TD ALIGN=RIGHT>5.521%</TD></TR>
   <TD ALIGN=RIGHT>5.539%</TD></TR>
<TR>
<TR>
   <TH>M. hapla&nbsp;melHap1</TH>
   <TH>M. hapla&nbsp;melHap1</TH>
Line 167: Line 162:
   <TD ALIGN=RIGHT>6.840%</TD></TR>
   <TD ALIGN=RIGHT>6.840%</TD></TR>
<TR>
<TR>
   <TH>M. incognita&nbsp;melInc2</TH>
   <TH>Filarial worm&nbsp;bruMal2</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-06-30</TD><TD ALIGN=RIGHT>3.516%</TD>
   <TD>2015-08-11</TD><TD ALIGN=RIGHT>5.065%</TD>
   <TD ALIGN=RIGHT>5.539%</TD></TR>
   <TD ALIGN=RIGHT>5.521%</TD></TR>
<TR>
<TR>
   <TH>O. volvulus&nbsp;oncVol1</TH>
   <TH>O. volvulus&nbsp;oncVol1</TH>
Line 179: Line 174:
   <TD ALIGN=RIGHT>5.092%</TD></TR>
   <TD ALIGN=RIGHT>5.092%</TD></TR>
<TR>
<TR>
   <TH>Trichinella&nbsp;triSpi1</TH>
   <TH>Eye worm&nbsp;loaLoa1</TH>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>2.848%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.056%</TD>
   <TD ALIGN=RIGHT>4.678%</TD></TR>
   <TD ALIGN=RIGHT>5.274%</TD></TR>
<TR>
  <TH>Whipworm&nbsp;triSui1</TH>
  <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
  <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
  <TD>2015-07-23</TD><TD ALIGN=RIGHT>2.917%</TD>
  <TD ALIGN=RIGHT>3.714%</TD></TR>
<TR>
<TR>
   <TH>Dog heartworm&nbsp;dirImm1</TH>
   <TH>Dog heartworm&nbsp;dirImm1</TH>
Line 196: Line 185:
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.005%</TD>
   <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.005%</TD>
   <TD ALIGN=RIGHT>5.474%</TD></TR>
   <TD ALIGN=RIGHT>5.474%</TD></TR>
<TR>
  <TH>Eye worm&nbsp;loaLoa1</TH>
  <TD>no</TD><TD>50</TD><TD>3000</TD><TD>3000</TD><TD>default</TD>
  <TD>9400</TD><TD>lastz-distrib-1.03.66/bin/lastz</TD><TD>30</TD><TD>2000</TD><TD>400</TD><TD>1</TD>
  <TD>2015-07-23</TD><TD ALIGN=RIGHT>5.056%</TD>
  <TD ALIGN=RIGHT>5.274%</TD></TR>
</TABLE>
</TABLE>

Revision as of 17:59, 3 September 2015

See Also


The default Q
scoring matrix is:
 
 ACGT
A91-114-31-123
C-114100-125-31
G-31-125100-114
T-123-31-11491

O=400 E=30

do not edit, automatically generated table

query abridged
repeats(no)
M(0)K(3000) L(3000)QY(9400) program
run
E(30)H(0) O(400)T(1) chain table
date
% of ce11
matched
(chainLink table)
% of query
matched
(chainLinkCe11)
C. sp. 5 ju800 caeSp51 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-0940.332% 31.721%
C. brenneri caePb3 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-0140.638% 32.296%
C. remanei caeRem4 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-0241.715% 33.416%
C. briggsae cb4 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-0139.384% 36.204%
C. tropicalis caeSp111 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-0737.870% 47.362%
C. japonica caeJap4 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-06-2527.709% 19.533%
C. angaria caeAng2 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-06-3017.682% 20.987%
P. pacificus priPac3 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-016.308% 4.534%
P. exspectatus priExs1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-236.222% 4.321%
Pine wood nematode burXyl1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-096.291% 8.293%
A. ceylanicum ancCey1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-239.736% 3.237%
Barber pole worm haeCon2 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-078.936% 3.405%
N. americanus necAme1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-238.902% 4.115%
Microworm panRed1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-016.585% 10.359%
H. bacteriophora/m31e hetBac1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-2310.486% 13.556%
Pig roundworm ascSuu1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-235.722% 2.224%
Threadworm strRat2 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-095.669% 11.848%
Trichinella triSpi1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-232.848% 4.678%
Whipworm triSui1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-232.917% 3.714%
M. incognita melInc2 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-06-303.516% 5.539%
M. hapla melHap1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-06-263.916% 6.840%
Filarial worm bruMal2 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-08-115.065% 5.521%
O. volvulus oncVol1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-08-105.193% 5.092%
Eye worm loaLoa1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-235.056% 5.274%
Dog heartworm dirImm1 no5030003000default 9400lastz-distrib-1.03.66/bin/lastz3020004001 2015-07-235.005% 5.474%