Genes in gtf or gff format: Revision history

5 February 2020

• curprev 00:0400:04, 5 February 2020‎ Lrnassar talk contribs‎ 22,997 bytes +179‎ No edit summary

4 February 2020

• curprev 19:1819:18, 4 February 2020‎ Dschmelt talk contribs‎ 22,818 bytes +418‎ Adding note about GTF downloads directory #20867

9 April 2019

• curprev 23:2123:21, 9 April 2019‎ Dschmelt talk contribs‎ 22,400 bytes −1,219‎ →‎The opposite direction, GTF to GenePred: Fixing chrom number
• curprev 23:1023:10, 9 April 2019‎ Dschmelt talk contribs‎ 23,619 bytes +797‎ →‎The opposite direction, GTF to GenePred: Fixing broken links in example

19 November 2018

• curprev 18:5118:51, 19 November 2018‎ Dschmelt talk contribs‎ 22,822 bytes +30‎ →‎Using kent commands with the public database server: Slight wording modifications.

16 November 2018

• curprev 22:1622:16, 16 November 2018‎ Dschmelt talk contribs‎ 22,792 bytes +45‎ →‎Using kent commands with the public database server: Ordering lines
• curprev 22:0822:08, 16 November 2018‎ Dschmelt talk contribs‎ 22,747 bytes +146‎ →‎Using kent commands with the public database server: Making more copy paste friendly.
• curprev 22:0422:04, 16 November 2018‎ Dschmelt talk contribs‎ 22,601 bytes +10‎ →‎Using kent commands with the public database server: Small typo edits
• curprev 21:4421:44, 16 November 2018‎ Dschmelt talk contribs‎ 22,591 bytes +15‎ →‎Using kent commands with the public database server: Adding few lines about downloading utility and setting permissions.
• curprev 21:3521:35, 16 November 2018‎ Dschmelt talk contribs‎ 22,576 bytes −1‎ →‎Using kent commands with the public database server: Formatting
• curprev 21:3521:35, 16 November 2018‎ Dschmelt talk contribs‎ 22,577 bytes −1‎ →‎Using kent commands with the public database server: Specifying path

1 September 2018

• curprev 07:5407:54, 1 September 2018‎ Galt talk contribs‎ 22,578 bytes 0‎ changed cse to soe

25 January 2018

• curprev 22:1322:13, 25 January 2018‎ Chmalee talk contribs‎ m 22,578 bytes +1‎ →‎Example with downloaded refGene.txt.gz: Adding 'n' to sort command to get numeric sort. Otherwise something like 10002682 will come before 11869
• curprev 00:3100:31, 25 January 2018‎ Cath Tyner talk contribs‎ 22,577 bytes +2,187‎ Adding example for perl script to replace the "gene ID" with the Ensembl ID, which is named "transcript_id."

22 December 2017

• curprev 17:2017:20, 22 December 2017‎ Cath Tyner talk contribs‎ m 20,390 bytes +209‎ No edit summary

31 October 2017

• curprev 23:1923:19, 31 October 2017‎ Cath Tyner talk contribs‎ m 20,181 bytes +313‎ →‎Warning - using a non genePred table to get GTF output in the Table Browser
• curprev 22:5822:58, 31 October 2017‎ Cath Tyner talk contribs‎ m 19,868 bytes +107‎ →‎Summary of limitations for Table Browser GTF output
• curprev 22:5122:51, 31 October 2017‎ Cath Tyner talk contribs‎ m 19,761 bytes −401‎ →‎Warning - using a non genePred table to get GTF output in the Table Browser
• curprev 22:1822:18, 31 October 2017‎ Cath Tyner talk contribs‎ m 20,162 bytes +35‎ →‎Warning - using a non genePred table to get GTF output in the Table Browser

• curprev 22:0722:07, 31 October 2017‎ Cath Tyner talk contribs‎ m 20,127 bytes −1‎ →‎Warning - using a non genePred table to get GTF output in the Table Browser