Hg38 7-way conservation alignment

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see also

do not edit

This table is automatically generated off-line from the UCSC databases. Please do not edit it.

URL to
assembly
sequence
UCSC db name/
genome-preview
browser
Scientific name/
assembly information
Common
name
assembly date (version) source
version
Repeat
Masker
Window
Masker
chain
on hg38
% of hg38
matched
(chainLink table)
01hg38Homo
sapiens
Human Dec. 2013 (GRCh38/hg38) GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.2) 2014-01-10 2013-12-25 N/AN/A
02panTro4Pan
troglodytes
Chimp Feb. 2011 (CSAC 2.1.4/panTro4) CSAC Pan_troglodytes-2.1.4 (GCA_000001515.4) 2012-01-09 2012-01-09 2014-05-2793.112%
03rheMac3Macaca
mulatta
Rhesus Oct. 2010 (BGI CR_1.0/rheMac3) Beijing Genomics Institute, Shenzhen (GCA_000230795.1) 2011-12-30 2012-01-03 2014-01-2879.729%
04canFam3Canis
lupus
familiaris
Dog Sep. 2011 (Broad CanFam3.1/canFam3) Broad CanFam3.1 (GCA_000002285.2) 2012-01-05 2012-01-06 2014-01-2749.978%
05mm10Mus
musculus
Mouse Dec. 2011 (GRCm38/mm10) Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) 2012-02-06 2012-02-07 2014-01-2531.629%
06rn5Rattus
norvegicus
Rat Mar. 2012 (RGSC 5.0/rn5) RGSC Rnor_5.0 (GCA_000001895.3) 2012-03-21 2012-03-21 2014-03-0130.788%
07monDom5Monodelphis
domestica
Opossum Oct. 2006 (Broad/monDom5) Broad Institute monDom5 (NCBI project 12561, accession AAFR03000000) 2009-08-14 2009-08-14 2014-05-2914.370%