Releasing an assembly: Revision history

10 March 2011

• curprev 19:2319:23, 10 March 2011‎ Vanessa talk contribs‎ 34 bytes −29,533‎ Replacing page with 'This page is no longer maintained.'

3 March 2011

• curprev 00:5700:57, 3 March 2011‎ Greg talk contribs‎ m 29,567 bytes +11‎ →‎Retire the assembly sub pushQ using retirePushQ.csh: changed the title and added an example for clarity

25 February 2011

• curprev 22:3922:39, 25 February 2011‎ Greg talk contribs‎ 29,556 bytes +52‎ →‎Make sure no tables need to be repushed from hgwdev to hgwbeta: added four tables to list that may not have same time stamp

23 February 2011

• curprev 19:5919:59, 23 February 2011‎ Marygoldman talk contribs‎ 29,504 bytes +94‎ →‎Pre-staging of assembly on hgwbeta: adding bit to claim main pushQ entry
• curprev 19:3819:38, 23 February 2011‎ Greg talk contribs‎ m 29,410 bytes +31‎ →‎Verify makedoc for all the tracks listed in the pushQ: oops, missed one table in the list....adding
• curprev 19:3719:37, 23 February 2011‎ Greg talk contribs‎ m 29,379 bytes +15‎ →‎Verify makedoc for all the tracks listed in the pushQ: Edited list of tables likely not in MakeDoc after checking in panTro3 while QA'ing it's initial release
• curprev 01:4301:43, 23 February 2011‎ Greg talk contribs‎ m 29,364 bytes +12‎ →‎Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical: clarified that the download link is on deb, not beta
• curprev 00:5200:52, 23 February 2011‎ Greg talk contribs‎ m 29,352 bytes +23‎ →‎defaultDb
• curprev 00:5000:50, 23 February 2011‎ Greg talk contribs‎ 29,329 bytes +200‎ →‎defaultDb: added example of updating a row
• curprev 00:3700:37, 23 February 2011‎ Greg talk contribs‎ m 29,129 bytes −29‎ →‎defaultDb: changed wording for clarity
• curprev 00:2100:21, 23 February 2011‎ Greg talk contribs‎ 29,158 bytes +2‎ →‎blatServers: changed last 2 lines to correctly show you are uploading file on beta, not dev

22 February 2011

• curprev 23:5823:58, 22 February 2011‎ Greg talk contribs‎ 29,156 bytes +118‎ →‎Push chain/net tables in other organisms: Added some text and put tables list in bullet points for greater clarity
• curprev 23:1123:11, 22 February 2011‎ Greg talk contribs‎ 29,038 bytes +151‎ →‎Verify makedoc for all the tracks listed in the pushQ: added additional tables that will probably not be in the makedoc
• curprev 22:5722:57, 22 February 2011‎ Marygoldman talk contribs‎ 28,887 bytes −5‎ →‎Push the database and tables from hgwdev to hgwbeta
• curprev 22:5122:51, 22 February 2011‎ Greg talk contribs‎ 28,892 bytes +500‎ →‎Push tables to mysqlbeta: Added method for moving DB from Dev to Beta
• curprev 19:3019:30, 22 February 2011‎ Marygoldman talk contribs‎ 28,392 bytes −80‎ →‎Announce the Release on genome-announce@soe.ucsc.edu and genecats@soe.ucsc.edu
• curprev 19:2919:29, 22 February 2011‎ Marygoldman talk contribs‎ 28,472 bytes −7‎ →‎Verify downloads
• curprev 19:2819:28, 22 February 2011‎ Marygoldman talk contribs‎ 28,479 bytes 0‎ →‎Stage assembly on Round Robin
• curprev 19:2819:28, 22 February 2011‎ Marygoldman talk contribs‎ 28,479 bytes −124‎ →‎Ensure the active column in hgcentral.dbDb is set to 0
• curprev 19:2619:26, 22 February 2011‎ Marygoldman talk contribs‎ 28,603 bytes −116‎ →‎Enable Assembly on RR and post-release follow-up

21 February 2011

• curprev 03:1703:17, 21 February 2011‎ Rhead talk contribs‎ 28,719 bytes +157‎ →‎Check the release log: added note about editing
• curprev 03:1303:13, 21 February 2011‎ Rhead talk contribs‎ 28,562 bytes +109‎ →‎Check the Genbank is running: added a check of gbLoaded table
• curprev 03:1003:10, 21 February 2011‎ Rhead talk contribs‎ 28,453 bytes +54‎ →‎You may need to update all.joiner for the RR: more details
• curprev 03:0303:03, 21 February 2011‎ Rhead talk contribs‎ 28,399 bytes +217‎ →‎Update/Add symlink in /usr/local/apache/htdocs-hgdownload/goldenPath/currentGenomes: more detailed instructions
• curprev 02:5302:53, 21 February 2011‎ Rhead talk contribs‎ 28,182 bytes −76‎ →‎Push Downloads from hgwdev to hgdownload: simplified
• curprev 02:5202:52, 21 February 2011‎ Rhead talk contribs‎ 28,258 bytes +27‎ →‎Announce the Release on genome@soe.ucsc.edu and genecats@soe.ucsc.edu: Announce on genome-announce instead of genome.
• curprev 02:4902:49, 21 February 2011‎ Rhead talk contribs‎ 28,231 bytes +39‎ →‎Test the assembly tracks, BLAT and PCR on the RR: added liftover, wording change
• curprev 02:4102:41, 21 February 2011‎ Rhead talk contribs‎ 28,192 bytes +176‎ →‎Adjust the release log in main pushQ: added note about getting track names, linked to release log
• curprev 02:3602:36, 21 February 2011‎ Rhead talk contribs‎ 28,016 bytes +137‎ reordered genbank updates, dump/autodump of database and updating hgcentral steps
• curprev 02:2702:27, 21 February 2011‎ Rhead talk contribs‎ m 27,879 bytes −5‎ →‎Update hgcentral
• curprev 02:2302:23, 21 February 2011‎ Rhead talk contribs‎ m 27,884 bytes +12‎ →‎Update hgcentralbeta
• curprev 02:2102:21, 21 February 2011‎ Rhead talk contribs‎ 27,872 bytes +143‎ →‎Update hgcentralbeta: added note about saving metadata files
• curprev 02:1702:17, 21 February 2011‎ Rhead talk contribs‎ m 27,729 bytes 0‎ →‎double-check /gbdb files
• curprev 02:1702:17, 21 February 2011‎ Rhead talk contribs‎ m 27,729 bytes −1‎ →‎=Ensure the active column in hgcentral.dbDb is set to 0
• curprev 02:1602:16, 21 February 2011‎ Rhead talk contribs‎ 27,730 bytes +13‎ changed the order of ensuring active=0, checking /gbdb files, and adjusting the release log
• curprev 02:0902:09, 21 February 2011‎ Rhead talk contribs‎ 27,717 bytes −14‎ →‎Check that all /gbdb files are present: make title match contents
• curprev 02:0802:08, 21 February 2011‎ Rhead talk contribs‎ 27,731 bytes +162‎ →‎rsync /gbdb again as necessary: More explicit instructions. Don't necessarily want files to be the same as on hgwdev.
• curprev 01:5601:56, 21 February 2011‎ Rhead talk contribs‎ 27,569 bytes +20‎ →‎Request rsync of entire database from push-request: Added note to check active=0, simplified the rest.
• curprev 01:4601:46, 21 February 2011‎ Rhead talk contribs‎ 27,549 bytes +276‎ →‎Email warning to genome-mirror at least 24 hours before release: a couple of extra notes about finding sizes
• curprev 01:3601:36, 21 February 2011‎ Rhead talk contribs‎ m 27,273 bytes +1‎ →‎Figure out if either you or Donna is going to edit the static docs
• curprev 01:3501:35, 21 February 2011‎ Rhead talk contribs‎ 27,272 bytes +16‎ →‎Verify downloads: little wording/punc. changes
• curprev 01:2001:20, 21 February 2011‎ Rhead talk contribs‎ 27,256 bytes −16‎ →‎Review all tracks in the sub-pushQ: took out redundant wording
• curprev 01:1901:19, 21 February 2011‎ Rhead talk contribs‎ m 27,272 bytes +1‎ →‎Verify blastTabs are updated if needed
• curprev 01:1801:18, 21 February 2011‎ Rhead talk contribs‎ 27,271 bytes +3‎ →‎Run featureBits to verify that the gold and gap tables together cover the entire genome: formatting
• curprev 01:1601:16, 21 February 2011‎ Rhead talk contribs‎ 27,268 bytes +2‎ →‎Verify makedoc for all the tracks listed in the pushQ: access the database from mysqlbeta (not necessarily hgwbeta)
• curprev 01:1101:11, 21 February 2011‎ Rhead talk contribs‎ 27,266 bytes −35‎ →‎liftOverChain: making it less wordy

18 February 2011

• curprev 02:0702:07, 18 February 2011‎ Rhead talk contribs‎ 27,301 bytes +140‎ →‎Check that it is not symlink on hgnfs1 and that there is only one file and is not in a subdirectory
• curprev 02:0002:00, 18 February 2011‎ Rhead talk contribs‎ m 27,161 bytes +66‎ →‎Turn on GenBank updates
• curprev 01:5501:55, 18 February 2011‎ Rhead talk contribs‎ 27,095 bytes +39‎ →‎Push image file to hgwbeta and rr: added note about where to push from
• curprev 01:4401:44, 18 February 2011‎ Rhead talk contribs‎ 27,056 bytes +38‎ →‎Push /gbdb/$db and html/description.html: little note about downloads
• curprev 01:3701:37, 18 February 2011‎ Rhead talk contribs‎ 27,018 bytes −8‎ →‎liftOverChain: still had a specific example in there!
• curprev 01:3601:36, 18 February 2011‎ Rhead talk contribs‎ m 27,026 bytes +5‎ →‎liftOverChain
• curprev 01:3501:35, 18 February 2011‎ Rhead talk contribs‎ 27,021 bytes −34‎ →‎liftOverChain
• curprev 01:2501:25, 18 February 2011‎ Rhead talk contribs‎ 27,055 bytes +8‎ →‎dbDb: fixed one spot that said beta where it should say test
• curprev 01:1701:17, 18 February 2011‎ Rhead talk contribs‎ 27,047 bytes +50‎ →‎Push chain/net tables in other organisms: reword
• curprev 00:2200:22, 18 February 2011‎ Rhead talk contribs‎ 26,997 bytes −10‎ →‎Create database on hgwbeta and push tables for $db: tweaked filenames so lines can be copied and pasted
• curprev 00:1900:19, 18 February 2011‎ Rhead talk contribs‎ 27,007 bytes −47‎ →‎Add assembly to mirror exclude list: only root can write to the mirror exclude list...

17 February 2011

• curprev 23:3823:38, 17 February 2011‎ Rhead talk contribs‎ m 27,054 bytes +2‎ →‎Check that any chain/net/liftOvers listed in the pushQ are to valid assemblies on the RR
• curprev 23:3823:38, 17 February 2011‎ Rhead talk contribs‎ 27,052 bytes −131‎ →‎Check that there the chain/nets/liftOvers listed in the pushQ are to valid assemblies on the RR

14 February 2011

• curprev 22:5322:53, 14 February 2011‎ Marygoldman talk contribs‎ 27,183 bytes −526‎ →‎Chain/Nets/LiftOvers from other organisms
• curprev 22:3822:38, 14 February 2011‎ Marygoldman talk contribs‎ 27,709 bytes +223‎ →‎blatServers, genomeClade, gdbPdb (NOT liftOver)
• curprev 22:3422:34, 14 February 2011‎ Marygoldman talk contribs‎ 27,486 bytes +166‎ →‎Review all tracks in the sub-pushQ

10 February 2011

• curprev 22:4422:44, 10 February 2011‎ Rhead talk contribs‎ 27,320 bytes +2‎ →‎Chain/Nets/LiftOvers to other organisms: this part really just describes nets/chains/lifts to the new org
• curprev 22:1222:12, 10 February 2011‎ Rhead talk contribs‎ m 27,318 bytes −3‎ →‎Stage on assembly on hgwbeta

8 February 2011

• curprev 20:4520:45, 8 February 2011‎ Rhead talk contribs‎ 27,321 bytes +323‎ →‎Chain/Nets to other organisms: reorganized section
• curprev 02:0102:01, 8 February 2011‎ Marygoldman talk contribs‎ 26,998 bytes +40‎ →‎If the new assembly is an update to the human, mouse, rat, zebrafish, D. melanogaster, C. elegans, or S. cerevisiae genomes, make sure that the appropriate blastTab tables to this assembly are built
• curprev 02:0002:00, 8 February 2011‎ Marygoldman talk contribs‎ 26,958 bytes +50‎ →‎Check the release log
• curprev 02:0002:00, 8 February 2011‎ Marygoldman talk contribs‎ 26,908 bytes +78‎ →‎Enable Assembly on RR and post-release follow-up
• curprev 01:5901:59, 8 February 2011‎ Marygoldman talk contribs‎ 26,830 bytes −164‎ →‎Next day follow-up
• curprev 01:5401:54, 8 February 2011‎ Marygoldman talk contribs‎ 26,994 bytes +265‎ →‎You may need to update all.joiner for the RR
• curprev 01:5201:52, 8 February 2011‎ Marygoldman talk contribs‎ 26,729 bytes +60‎ →‎Update hgcentral.sql for mirrors
• curprev 01:5001:50, 8 February 2011‎ Marygoldman talk contribs‎ 26,669 bytes −109‎ →‎Announce the Release on genome@soe.ucsc.edu and genecats@soe.ucsc.edu
• curprev 01:4901:49, 8 February 2011‎ Marygoldman talk contribs‎ 26,778 bytes +100‎ →‎Push Static Content from hgwdev to hgwbeta and Round Robin
• curprev 01:4701:47, 8 February 2011‎ Marygoldman talk contribs‎ 26,678 bytes −95‎ →‎Push Static Content from hgwdev to hgwbeta and Round Robin
• curprev 01:4601:46, 8 February 2011‎ Marygoldman talk contribs‎ 26,773 bytes +116‎ →‎Figure out if either you or Donna is going to edit the static docs
• curprev 01:4401:44, 8 February 2011‎ Marygoldman talk contribs‎ 26,657 bytes +44‎ →‎Turn on genome-mysql
• curprev 01:4001:40, 8 February 2011‎ Marygoldman talk contribs‎ 26,613 bytes −57‎ →‎Confirm that downloads and currentGenome are functional
• curprev 01:4001:40, 8 February 2011‎ Marygoldman talk contribs‎ 26,670 bytes +60‎ →‎Update/Add symlink in /usr/local/apache/htdocs-hgdownload/goldenPath/currentGenomes
• curprev 01:3901:39, 8 February 2011‎ Marygoldman talk contribs‎ 26,610 bytes +55‎ →‎Push Downloads from hgwdev to hgdownload
• curprev 01:3801:38, 8 February 2011‎ Marygoldman talk contribs‎ 26,555 bytes +1‎ →‎Update/Add symlink in /usr/local/apache/htdocs-hgdownload/goldenPath/currentGenomes
• curprev 01:3601:36, 8 February 2011‎ Marygoldman talk contribs‎ 26,554 bytes +41‎ →‎Remove assembly from mirror "exclude" list
• curprev 01:3501:35, 8 February 2011‎ Marygoldman talk contribs‎ 26,513 bytes +65‎ →‎Verify again that everything is working as expected on the RR
• curprev 01:3501:35, 8 February 2011‎ Marygoldman talk contribs‎ 26,448 bytes −82‎ →‎Enable Assembly on RR and post-release follow-up
• curprev 01:3401:34, 8 February 2011‎ Marygoldman talk contribs‎ 26,530 bytes +61‎ →‎Chain/Nets to other organisms
• curprev 01:3101:31, 8 February 2011‎ Marygoldman talk contribs‎ 26,469 bytes +72‎ →‎Set active=1 in hgcentral
• curprev 01:3001:30, 8 February 2011‎ Marygoldman talk contribs‎ 26,397 bytes −17‎ →‎Test the assembly tracks, BLAT and PCR on the RR
• curprev 01:2401:24, 8 February 2011‎ Marygoldman talk contribs‎ 26,414 bytes −44‎ →‎Request dump and autodump of database
• curprev 01:2201:22, 8 February 2011‎ Marygoldman talk contribs‎ 26,458 bytes −37‎ →‎Turn on genbank updates on the RR
• curprev 01:2201:22, 8 February 2011‎ Marygoldman talk contribs‎ 26,495 bytes +147‎ →‎Turn on genbank updates on the RR
• curprev 01:2001:20, 8 February 2011‎ Marygoldman talk contribs‎ 26,348 bytes −7‎ →‎Update hgcentral
• curprev 01:1901:19, 8 February 2011‎ Marygoldman talk contribs‎ 26,355 bytes +201‎ →‎Update hgcentral
• curprev 01:1501:15, 8 February 2011‎ Marygoldman talk contribs‎ 26,154 bytes −1‎ →‎rsync /gbdb again as necessary
• curprev 01:1401:14, 8 February 2011‎ Marygoldman talk contribs‎ 26,155 bytes −1‎ →‎Request rsync of entire database from push-request
• curprev 01:1401:14, 8 February 2011‎ Marygoldman talk contribs‎ 26,156 bytes +100‎ →‎Request rsync of entire database from push-request
• curprev 01:1101:11, 8 February 2011‎ Marygoldman talk contribs‎ 26,056 bytes −2‎ →‎Adjust the release log in main pushQ
• curprev 01:1101:11, 8 February 2011‎ Marygoldman talk contribs‎ 26,058 bytes +7‎ →‎Email warning genome-mirror at least 24 hours before release
• curprev 01:1001:10, 8 February 2011‎ Marygoldman talk contribs‎ 26,051 bytes +9‎ →‎Make sure no tables need to be repushed from hgwdev to hgwbeta
• curprev 01:0901:09, 8 February 2011‎ Marygoldman talk contribs‎ 26,042 bytes +135‎ →‎Stage assembly on Round Robin
• curprev 01:0401:04, 8 February 2011‎ Marygoldman talk contribs‎ 25,907 bytes +140‎ →‎Verify that liftOvers are in liftOvers directories and not in vs* Directories
• curprev 01:0101:01, 8 February 2011‎ Marygoldman talk contribs‎ 25,767 bytes −13‎ →‎Verify downloads
• curprev 00:5800:58, 8 February 2011‎ Marygoldman talk contribs‎ 25,780 bytes +42‎ →‎Check Blat and PCR
• curprev 00:5500:55, 8 February 2011‎ Marygoldman talk contribs‎ 25,738 bytes +1‎ →‎Check that all of the MySQL tables are in good repair
• curprev 00:5400:54, 8 February 2011‎ Marygoldman talk contribs‎ 25,737 bytes +2‎ →‎Check to make sure that none of the table names have underscores(_)
• curprev 00:5400:54, 8 February 2011‎ Marygoldman talk contribs‎ 25,735 bytes −7‎ →‎Run featureBits to verify that the gold and gap tables together cover the entire genome
• curprev 00:5300:53, 8 February 2011‎ Marygoldman talk contribs‎ 25,742 bytes −1‎ →‎Check indices
• curprev 00:5200:52, 8 February 2011‎ Marygoldman talk contribs‎ 25,743 bytes +31‎ →‎Check indices
• curprev 00:5000:50, 8 February 2011‎ Marygoldman talk contribs‎ 25,712 bytes +1‎ →‎Check that all tables in this database are mentioned in all.joiner
• curprev 00:5000:50, 8 February 2011‎ Marygoldman talk contribs‎ 25,711 bytes +4‎ →‎joinerCheck
• curprev 00:2600:26, 8 February 2011‎ Marygoldman talk contribs‎ 25,707 bytes −3‎ →‎Turn on GenBank updates
• curprev 00:2000:20, 8 February 2011‎ Marygoldman talk contribs‎ m 25,710 bytes +1‎ →‎Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
• curprev 00:2000:20, 8 February 2011‎ Marygoldman talk contribs‎ 25,709 bytes +103‎ →‎Review phylogenetic location in pull-down menus on hgGateway
• curprev 00:1800:18, 8 February 2011‎ Marygoldman talk contribs‎ m 25,606 bytes −6‎ →‎Test on hgwbeta: re-ordering list
• curprev 00:1600:16, 8 February 2011‎ Marygoldman talk contribs‎ 25,612 bytes +6‎ →‎Check the .2bit files
• curprev 00:1300:13, 8 February 2011‎ Marygoldman talk contribs‎ m 25,606 bytes −1‎ →‎Push /gbdb/$db and html/description.html=
• curprev 00:1300:13, 8 February 2011‎ Marygoldman talk contribs‎ 25,607 bytes −25‎ →‎Push files
• curprev 00:0900:09, 8 February 2011‎ Marygoldman talk contribs‎ 25,632 bytes −4‎ →‎=genomeClade and gdbPdb
• curprev 00:0800:08, 8 February 2011‎ Marygoldman talk contribs‎ 25,636 bytes −2‎ →‎genomeClade and gdbPdb

7 February 2011

• curprev 23:5823:58, 7 February 2011‎ Marygoldman talk contribs‎ 25,638 bytes −3‎ →‎blatServers
• curprev 23:4923:49, 7 February 2011‎ Marygoldman talk contribs‎ 25,641 bytes +28‎ →‎blatServers
• curprev 23:4923:49, 7 February 2011‎ Marygoldman talk contribs‎ 25,613 bytes +20‎ →‎blatServers
• curprev 23:4823:48, 7 February 2011‎ Marygoldman talk contribs‎ 25,593 bytes −194‎ →‎blatServers
• curprev 23:4423:44, 7 February 2011‎ Marygoldman talk contribs‎ 25,787 bytes +2‎ →‎dbDb
• curprev 23:4223:42, 7 February 2011‎ Marygoldman talk contribs‎ 25,785 bytes +29‎ →‎Push chain/net tables in other organisms
• curprev 23:4123:41, 7 February 2011‎ Marygoldman talk contribs‎ 25,756 bytes −9‎ →‎Create database on hgwbeta and push tables for $db
• curprev 23:3923:39, 7 February 2011‎ Marygoldman talk contribs‎ 25,765 bytes −27‎ →‎Create database on hgwbeta and push tables for $db
• curprev 23:3823:38, 7 February 2011‎ Marygoldman talk contribs‎ 25,792 bytes +5‎ →‎Check if chromosome sizes have changed significantly
• curprev 23:3423:34, 7 February 2011‎ Marygoldman talk contribs‎ 25,787 bytes −9‎ →‎Send email to markd and Jeltje van Baren: jeltje at cse.wustl.edu so that they can being doing their N-Scan predictions
• curprev 23:3223:32, 7 February 2011‎ Marygoldman talk contribs‎ 25,796 bytes −3‎ →‎Check that there the chain/nets and liftOvers listed in the pushQ are to valid assemblies on the RR

20 January 2011

• curprev 00:0300:03, 20 January 2011‎ Rhead talk contribs‎ m 25,799 bytes +5‎ →‎Update hgcentralbeta: bold checkMetaData.csh

19 January 2011

• curprev 23:4623:46, 19 January 2011‎ Marygoldman talk contribs‎ m 25,794 bytes −8‎ →‎Next day follow-up
• curprev 23:4523:45, 19 January 2011‎ Marygoldman talk contribs‎ m 25,802 bytes −4‎ →‎Enable Assembly on RR and post-release follow-up: formatting
• curprev 23:4423:44, 19 January 2011‎ Marygoldman talk contribs‎ m 25,806 bytes −3‎ →‎Stage assembly on Round Robin: formatting
• curprev 23:4423:44, 19 January 2011‎ Marygoldman talk contribs‎ m 25,809 bytes −8‎ →‎Verify the downloads: formatting
• curprev 23:3523:35, 19 January 2011‎ Marygoldman talk contribs‎ m 25,817 bytes −1‎ →‎Check that all of the MySQL tables are in good repair: formatting
• curprev 23:3423:34, 19 January 2011‎ Marygoldman talk contribs‎ m 25,818 bytes −2‎ →‎Make sure that there is a liftOver file from the previous assembly to this assembly: formatting
• curprev 23:3423:34, 19 January 2011‎ Marygoldman talk contribs‎ m 25,820 bytes −9‎ →‎Check to make sure that none of the table names have underscores(_): formatting
• curprev 23:3423:34, 19 January 2011‎ Marygoldman talk contribs‎ m 25,829 bytes −2‎ →‎Check indices: formatting
• curprev 23:3323:33, 19 January 2011‎ Marygoldman talk contribs‎ m 25,831 bytes −2‎ →‎Check that all tables in this database are mentioned in all.joiner=: formatting
• curprev 23:3323:33, 19 January 2011‎ Marygoldman talk contribs‎ m 25,833 bytes 0‎ →‎Check that common keys between tables are in sync: formatting
• curprev 23:3223:32, 19 January 2011‎ Marygoldman talk contribs‎ m 25,833 bytes −2‎ →‎Review phylogenetic location in pull-down menus on hgGateway: formatting
• curprev 23:3123:31, 19 January 2011‎ Marygoldman talk contribs‎ 25,835 bytes −2‎ →‎Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
• curprev 23:3123:31, 19 January 2011‎ Marygoldman talk contribs‎ m 25,837 bytes −2‎ →‎Turn on GenBank updates: formatting
• curprev 23:3023:30, 19 January 2011‎ Marygoldman talk contribs‎ m 25,839 bytes −1‎ →‎Make trackDb on hgwbeta: formatting
• curprev 23:3023:30, 19 January 2011‎ Marygoldman talk contribs‎ m 25,840 bytes −2‎ →‎Push image file to hgwbeta and rr: formatting
• curprev 23:2223:22, 19 January 2011‎ Marygoldman talk contribs‎ m 25,842 bytes −1‎ →‎liftOverChain: formatting
• curprev 23:2123:21, 19 January 2011‎ Marygoldman talk contribs‎ m 25,843 bytes −61‎ →‎blatServers: formatting
• curprev 23:2023:20, 19 January 2011‎ Marygoldman talk contribs‎ m 25,904 bytes −1‎ →‎dbDb: formatting
• curprev 23:1923:19, 19 January 2011‎ Marygoldman talk contribs‎ m 25,905 bytes −1‎ →‎Push chain/net tables in other organisms: formatting
• curprev 23:1923:19, 19 January 2011‎ Marygoldman talk contribs‎ m 25,906 bytes −9‎ →‎Create database on hgwbeta and push tables for $db: formatting
• curprev 23:1723:17, 19 January 2011‎ Marygoldman talk contribs‎ m 25,915 bytes −2‎ →‎Check if chromosome sizes have changed significantly: formatting

• curprev 23:1123:11, 19 January 2011‎ Marygoldman talk contribs‎ 25,917 bytes +25,917‎ New page: ==Pre-staging of assembly on hgwbeta== ===Check if chromosome sizes have changed significantly=== * If you are releasing an update assembly, check to see if chromosome sizes have changed ...