Same species lift over construction: Difference between revisions

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=Same Species Lift Over=
Same species lift over procedure.  There is a different procedure for different species lift over construction: [[Minimal_Steps_For_LiftOver]]
Same species lift over procedure.  There is a different procedure for different species lift over construction: [[Minimal_Steps_For_LiftOver]]
=Step 1 - blat=
Decide on a workDirectory where all this is to be performed.  Note the script: [[File:sameSpeciesBlatSetup.sh.txt]]
and the comments in it to setup the workDirectory and your two genome sequences.

Revision as of 04:48, 13 March 2013

Same Species Lift Over

Same species lift over procedure. There is a different procedure for different species lift over construction: Minimal_Steps_For_LiftOver

Step 1 - blat

Decide on a workDirectory where all this is to be performed. Note the script: File:SameSpeciesBlatSetup.sh.txt and the comments in it to setup the workDirectory and your two genome sequences.