User contributions for Brian Lee
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1 December 2021
- 18:3418:34, 1 December 2021 diff hist +116 N File:PAG GenArk Poster.pdf Poster about GenArk (Genome Archive) Assembly Hubs at Plant and Animals Genomes (PAG) conference in San Diego, 2022. current
15 November 2021
- 23:5223:52, 15 November 2021 diff hist +3 Browser slow →verify browser performance similar to web browser access current
- 23:4723:47, 15 November 2021 diff hist +33 Browser slow →verify browser alive and well
- 23:4123:41, 15 November 2021 diff hist +5 Browser slow →Check network connection
- 23:4023:40, 15 November 2021 diff hist +70 Browser slow →Background explaining how the Browser works
- 23:3723:37, 15 November 2021 diff hist +297 Browser slow →Background of how the Browser accesses data: Ammendments to the background section
- 23:2323:23, 15 November 2021 diff hist +26 Browser slow →Checklist for an average user: note about track hubs for Avg User Checklist
- 23:2223:22, 15 November 2021 diff hist +7 Browser slow →Checklist for an average user
- 23:2023:20, 15 November 2021 diff hist +1 Browser slow →Checklist for an average user: Adding link to Mailing List
- 23:1923:19, 15 November 2021 diff hist −2 Browser slow →Checklist for an average user
- 23:1923:19, 15 November 2021 diff hist −2 Browser slow →Checklist for an average user
- 23:1823:18, 15 November 2021 diff hist −2 Browser slow →Checklist for an average user
- 23:1823:18, 15 November 2021 diff hist +53 Browser slow →Checklist for an average user
- 23:1323:13, 15 November 2021 diff hist +36 Browser slow →Checklist for an average user: note on how to get to sessions.
- 23:1123:11, 15 November 2021 diff hist +26 Browser slow →Checklist for an average user
- 23:1023:10, 15 November 2021 diff hist +1,488 Browser slow Adding checklist for average user
- 22:5722:57, 15 November 2021 diff hist −4 Browser slow No edit summary
- 21:5821:58, 15 November 2021 diff hist +1 Browser slow →Background of how the Browser accesses data
- 21:5421:54, 15 November 2021 diff hist +434 Browser slow No edit summary
15 September 2021
- 21:3621:36, 15 September 2021 diff hist +328 Public Hub Guidelines →Public Hub Examples: Adding link to filters and to useOneFile on Docs #27255
26 April 2021
- 15:5615:56, 26 April 2021 diff hist +226 File too large checked in Adding a link to another part in our wiki where we try to remind people not to use large images in genome-announce emails too http://genomewiki.cse.ucsc.edu/genecats/index.php/New_track_checklist#Announce_on_indexNews.2C_newsArch.2C_Genome-announce.2C_FB.
9 February 2021
- 22:3122:31, 9 February 2021 diff hist +65 Genome Browser Software Features →16 February 2021, v410: adding a few more words to capture bigPsl work
- 22:0722:07, 9 February 2021 diff hist +24 Presentations →2018: Updating presentation list to distinguish talk vs poster.
- 22:0422:04, 9 February 2021 diff hist +8 Presentations →2018: Updating a note about a talk vs poster in presentation list.
- 21:5121:51, 9 February 2021 diff hist +8 Presentations →2019: Updating note about a talk at UO.
- 20:4020:40, 9 February 2021 diff hist −6 Genome Browser Software Features →26 January 2021, v409: Updating the v409 entry to share the font feature was released.
- 20:3920:39, 9 February 2021 diff hist +351 Genome Browser Software Features →2021: 1st pass of putting in v410 code summaries
21 January 2021
- 19:3719:37, 21 January 2021 diff hist +329 Genome Browser Software Features →2020: v409
13 January 2021
- 23:1923:19, 13 January 2021 diff hist 0 Presentations →2019
- 21:3121:31, 13 January 2021 diff hist +163 Presentations →2019: mp4 to Bob's talk
- 21:2821:28, 13 January 2021 diff hist +246 Presentations →2019: mp4 Ana talk
- 21:2421:24, 13 January 2021 diff hist +82 Presentations →2020: Adding link to Jorge talk
8 December 2020
- 23:4023:40, 8 December 2020 diff hist +189 Genome Browser Software Features →15 December 2020, v408
- 22:1022:10, 8 December 2020 diff hist +224 Assembly Hubs →Adding BLAT servers: Added some wording about isPcr to help users find it.
- 22:0022:00, 8 December 2020 diff hist +577 Assembly Hubs →genomes.txt: Adding three settings to the genomes.txt section about blat/transBlat and isPcr
- 19:0619:06, 8 December 2020 diff hist +131 Genome Browser Software Features →2020: v408 summaries first pass
3 December 2020
- 19:5719:57, 3 December 2020 diff hist 0 Presentations →2019
18 November 2020
- 18:1918:19, 18 November 2020 diff hist +477 Genome Browser Software Features →2020: v407
4 November 2020
- 22:4422:44, 4 November 2020 diff hist +5 Presentations →2020
- 22:4322:43, 4 November 2020 diff hist 0 N File:Browsermap2020.pdf No edit summary current
- 22:4222:42, 4 November 2020 diff hist +107 Presentations →2020: adding Jorge talk and link to file
29 October 2020
- 17:3217:32, 29 October 2020 diff hist +670 Genome Browser Software Features →2020: v406 summaries
15 October 2020
- 21:1021:10, 15 October 2020 diff hist +68 ThreeStateTrackDb No edit summary current
- 21:0321:03, 15 October 2020 diff hist +47 ThreeStateTrackDb Link to new push request page added.
7 October 2020
- 17:0817:08, 7 October 2020 diff hist +478 Genome Browser Software Features →2020: v405
2 October 2020
- 20:5320:53, 2 October 2020 diff hist +28 Video Guide for New Users Fixing my bad, apparently you start with ==topic1== and not =topic1=
- 20:4620:46, 2 October 2020 diff hist +109 Video Guide for New Users Showing how : can indent text.
- 20:4520:45, 2 October 2020 diff hist +43 Video Guide for New Users Creating example structure
- 20:4220:42, 2 October 2020 diff hist +52 Video Guide for New Users No edit summary
- 20:4020:40, 2 October 2020 diff hist +2 Video Guide for New Users No edit summary
- 20:3920:39, 2 October 2020 diff hist +143 N Video Guide for New Users Adding new http://genomewiki.ucsc.edu/index.php/Video_Guide_for_New_Users as a place to put Gerardo's Guide to our youtube videos
17 September 2020
- 16:3216:32, 17 September 2020 diff hist +518 Genome Browser Software Features →2020: v404 summaries.
25 August 2020
- 22:1222:12, 25 August 2020 diff hist +1 Genome Browser Software Features →1 September 2020, v403
- 22:1122:11, 25 August 2020 diff hist +366 Genome Browser Software Features →2020: v403
13 August 2020
- 22:4122:41, 13 August 2020 diff hist +35 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository: permissions necessary
- 22:2222:22, 13 August 2020 diff hist +24 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
- 22:1822:18, 13 August 2020 diff hist +18 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
13 July 2020
- 23:2623:26, 13 July 2020 diff hist +636 Genome Browser Software Features →2020: v401
23 June 2020
- 16:4216:42, 23 June 2020 diff hist +202 Genome Browser Software Features →30 June 2020, v400
- 16:0316:03, 23 June 2020 diff hist +196 Genome Browser Software Features →2020: Staging v400 entry
4 June 2020
- 16:5616:56, 4 June 2020 diff hist +519 Genome Browser Software Features →19 May 2020, v398: v399
13 May 2020
- 00:0100:01, 13 May 2020 diff hist +85 Genome Browser Software Features →28 April 2020, v397
- 00:0000:00, 13 May 2020 diff hist +709 Genome Browser Software Features →2020: v398
22 April 2020
- 21:1721:17, 22 April 2020 diff hist +369 Genome Browser Software Features →2020: v397 entry added.
1 April 2020
- 22:3222:32, 1 April 2020 diff hist −1 Genome Browser Software Features →7 April 2020, v396
- 22:3222:32, 1 April 2020 diff hist +615 Genome Browser Software Features →2020: v396 summaries.
12 March 2020
- 23:5923:59, 12 March 2020 diff hist +338 Genome Browser Software Features →2020: v395
20 February 2020
- 22:0622:06, 20 February 2020 diff hist +751 Genome Browser Software Features →2020: Adding v394 summary
29 January 2020
- 23:2523:25, 29 January 2020 diff hist +454 Genome Browser Software Features →2020: v393
17 January 2020
- 18:4118:41, 17 January 2020 diff hist +15 Presentations →2020
- 18:3818:38, 17 January 2020 diff hist 0 Presentations →2020
- 18:3718:37, 17 January 2020 diff hist +93 Presentations →2020
- 18:3718:37, 17 January 2020 diff hist 0 N File:2020 PAG UCSC part3.pdf No edit summary current
- 18:3618:36, 17 January 2020 diff hist 0 N File:2020 PAG UCSC part2.pdf No edit summary current
- 18:3618:36, 17 January 2020 diff hist 0 N File:2020 PAG UCSC part1.pdf No edit summary current
- 18:3318:33, 17 January 2020 diff hist −1 Presentations →2020
- 18:3218:32, 17 January 2020 diff hist 0 N File:PAG Poster API.pdf No edit summary current
- 18:3118:31, 17 January 2020 diff hist 0 N File:PAG Hubs CyVerse.pdf No edit summary current
- 18:2818:28, 17 January 2020 diff hist −1 Presentations →2020
- 18:2618:26, 17 January 2020 diff hist +670 Presentations →2019: Adding 2020 section and stubs for PAG presentations.
9 January 2020
- 21:2321:23, 9 January 2020 diff hist +343 Genome Browser Software Features →2019: adding v392
4 December 2019
- 17:1817:18, 4 December 2019 diff hist +767 Genome Browser Software Features →2019: Adding v391 summary
5 November 2019
- 20:0920:09, 5 November 2019 diff hist +66 Genome Browser Software Features →12 November 2019, v390
- 00:4500:45, 5 November 2019 diff hist +426 Genome Browser Software Features →2019: Adding v390 summary
16 October 2019
- 23:5123:51, 16 October 2019 diff hist +510 Genome Browser Software Features →2019: v389
26 September 2019
- 22:5322:53, 26 September 2019 diff hist +197 Presentations →2019: Adding entry about ASHG poster on interact and GeneHancer
- 22:4822:48, 26 September 2019 diff hist 0 N File:ASHG 2019 Interact.pdf No edit summary current
25 September 2019
- 19:4319:43, 25 September 2019 diff hist 0 Genome Browser Software Features →1 October 2019, v388
- 19:4019:40, 25 September 2019 diff hist +746 Genome Browser Software Features →2019: v388 summaries
3 September 2019
- 23:3323:33, 3 September 2019 diff hist +336 Genome Browser Software Features →2019: Adding v387 summaries
14 August 2019
- 18:0918:09, 14 August 2019 diff hist −2 Genome Browser Software Features →20 August 2019, v386
- 18:0918:09, 14 August 2019 diff hist +14 Genome Browser Software Features →20 August 2019, v386: updating v386 to note that Track Hub changes are under hg.conf control
- 18:0118:01, 14 August 2019 diff hist +637 Genome Browser Software Features →2019: Adding v386 summaries
23 July 2019
- 23:5123:51, 23 July 2019 diff hist +474 Genome Browser Software Features →2019: v385 summaries
2 July 2019
- 20:0320:03, 2 July 2019 diff hist +582 Genome Browser Software Features →2019: Adding v384
11 June 2019
- 20:1320:13, 11 June 2019 diff hist +341 Genome Browser Software Features →2019: v383 summaries
22 May 2019
- 15:2215:22, 22 May 2019 diff hist +1 Genome Browser Software Features →28 May 2019, v382
- 15:2115:21, 22 May 2019 diff hist +392 Genome Browser Software Features →2019: v382
30 April 2019
- 23:2523:25, 30 April 2019 diff hist −1 Genome Browser Software Features →7 May 2019, v381: correcting date
- 23:2323:23, 30 April 2019 diff hist +455 Genome Browser Software Features →2019: n
15 April 2019
- 19:4619:46, 15 April 2019 diff hist +252 Assembly Hubs →Assembly Hub Resources: Adding MakeHub to page
10 April 2019
- 20:4420:44, 10 April 2019 diff hist +365 Genome Browser Software Features →2019: Adding v380
20 March 2019
- 16:4816:48, 20 March 2019 diff hist +1,269 Genome Browser Software Features →2019: v379
15 March 2019
- 17:2417:24, 15 March 2019 diff hist +6 Cloud-storage providers and byte-range requests of UCSC big* files adding emphasis to the word backup current
14 March 2019
- 17:2417:24, 14 March 2019 diff hist +105 DoSameSpeciesLiftOver.pl →How does this process work: Adding note about -debug mode current
7 March 2019
- 23:3623:36, 7 March 2019 diff hist +31 Presentations →2019
- 23:3523:35, 7 March 2019 diff hist 0 N File:UO Hubs.pdf No edit summary current
- 23:3423:34, 7 March 2019 diff hist +54 Presentations →2019
- 23:3323:33, 7 March 2019 diff hist 0 N File:UO UCSC CustomTracks.pdf No edit summary current
- 23:3123:31, 7 March 2019 diff hist +26 Presentations →2019
- 23:3123:31, 7 March 2019 diff hist 0 N File:UO UCSC.pdf No edit summary current
- 23:2923:29, 7 March 2019 diff hist −21 Presentations →2019
- 23:2723:27, 7 March 2019 diff hist 0 N File:PAG Hubs.pdf No edit summary current
- 23:2323:23, 7 March 2019 diff hist +199 Presentations →2019: PAG talk
- 23:1723:17, 7 March 2019 diff hist +1 Presentations →2019
- 23:1723:17, 7 March 2019 diff hist +1 Presentations →2019
- 23:1723:17, 7 March 2019 diff hist +348 Presentations →2019: Genomics In Action event
- 23:1223:12, 7 March 2019 diff hist +4 Presentations →2018
- 23:1123:11, 7 March 2019 diff hist +156 Presentations →2018: May 2018 RNA seq presentation
8 February 2019
- 20:4120:41, 8 February 2019 diff hist 0 Genome Browser Software Features →2019: Putting most recent first (Feb v377 before Jan v376)
7 January 2019
- 19:1919:19, 7 January 2019 diff hist 0 File:UCSC PAG 2019 AssemblyHub.pdf Brian Lee uploaded a new version of File:UCSC PAG 2019 AssemblyHub.pdf current
4 January 2019
- 20:5920:59, 4 January 2019 diff hist +5 Presentations →2019
- 20:5720:57, 4 January 2019 diff hist +3 Presentations →2019
- 20:5720:57, 4 January 2019 diff hist −4 Presentations →2019
- 20:1220:12, 4 January 2019 diff hist 0 N File:UCSC PAG 2019 AssemblyHub.pdf No edit summary
- 20:0820:08, 4 January 2019 diff hist +280 Presentations Adding 2019 presentations.
26 November 2018
- 18:1318:13, 26 November 2018 diff hist −1 Public Hub Guidelines →Connection issues?: updating genome-test.gi.ucsc.edu from .soe.
15 November 2018
- 00:5400:54, 15 November 2018 diff hist +97 Presentations →2010
- 00:5100:51, 15 November 2018 diff hist +55 Presentations Jorge talk of machine setup
- 00:4900:49, 15 November 2018 diff hist 0 N File:Browsermap2018.pdf No edit summary current
- 00:4900:49, 15 November 2018 diff hist +153 Presentations →2018
30 October 2018
- 23:0223:02, 30 October 2018 diff hist −13 Public Hub Guidelines →Required Guidelines: updating descriptionUrl
3 October 2018
- 20:1020:10, 3 October 2018 diff hist +243 Genome Browser Software Features →2018: Adding v372 summaries
24 August 2018
- 00:0200:02, 24 August 2018 diff hist −1 Genome Browser Software Features →28 August 2018, v379
- 00:0200:02, 24 August 2018 diff hist +306 Genome Browser Software Features →2018
22 August 2018
- 23:1123:11, 22 August 2018 diff hist −4 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
- 23:1023:10, 22 August 2018 diff hist +122 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
6 August 2018
- 19:1819:18, 6 August 2018 diff hist 0 Getting Started With Git Swapping .cse. for .soe. in git clone examples and elsewhere.
30 July 2018
- 22:5322:53, 30 July 2018 diff hist −3 Genome Browser Software Features →7 August 2018, v369
- 22:5222:52, 30 July 2018 diff hist +10 Genome Browser Software Features →2018
- 22:5122:51, 30 July 2018 diff hist +477 Genome Browser Software Features →2018: Adding v369
- 19:0919:09, 30 July 2018 diff hist +438 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository: adding reminder to create a key for git pull/git push
- 18:4618:46, 30 July 2018 diff hist +50 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
- 18:4518:45, 30 July 2018 diff hist +49 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository: adding note to ignore this.
11 July 2018
- 22:5222:52, 11 July 2018 diff hist +312 Genome Browser Software Features →2018: v368 summaries
19 June 2018
- 21:2921:29, 19 June 2018 diff hist −1 Genome Browser Software Features →26 June 2018, v366
- 21:0221:02, 19 June 2018 diff hist +546 Genome Browser Software Features →2018: v367 summaries
30 May 2018
- 17:1917:19, 30 May 2018 diff hist +1 Genome Browser Software Features →5 June 2018, v366
- 17:1917:19, 30 May 2018 diff hist +500 Genome Browser Software Features →2018: v366 summaries
10 May 2018
- 21:4021:40, 10 May 2018 diff hist −7 Genome Browser Software Features →15 May 2018, v365
- 21:3621:36, 10 May 2018 diff hist +384 Genome Browser Software Features →2018: v365 summaries
20 April 2018
- 21:4421:44, 20 April 2018 diff hist +3 Presentations No edit summary
17 April 2018
- 23:4523:45, 17 April 2018 diff hist +303 Genome Browser Software Features →2018: v364 addition
9 April 2018
- 17:0217:02, 9 April 2018 diff hist +134 LiftOver Howto No edit summary
28 March 2018
- 15:5815:58, 28 March 2018 diff hist −5 Genome Browser Software Features →3 April 2018, v363
- 15:5315:53, 28 March 2018 diff hist +312 Genome Browser Software Features →2018: Adding v363 summaries.
13 March 2018
8 March 2018
- 22:1622:16, 8 March 2018 diff hist +4 Public Hub Guidelines →Connection issues?: small edit to fully name genome-test
7 March 2018
- 18:5818:58, 7 March 2018 diff hist +78 Genome Browser Software Features →13 March 2018, v362
- 17:3417:34, 7 March 2018 diff hist +22 Genome Browser Software Features →13 March 2018, v362
- 17:3317:33, 7 March 2018 diff hist +660 Genome Browser Software Features →2018: 362 summaries v1
15 February 2018
- 23:0923:09, 15 February 2018 diff hist +499 Genome Browser Software Features →2018: v361
24 January 2018
- 22:1822:18, 24 January 2018 diff hist +1 Genome Browser Software Features →30 January 2018, v360
- 22:1722:17, 24 January 2018 diff hist +375 Genome Browser Software Features →2018: adding v360 summaries
19 January 2018
- 21:5021:50, 19 January 2018 diff hist 0 Learn about the Browser →Modify your own copy of the browser
- 19:5019:50, 19 January 2018 diff hist −444 Presentations →2018: Adding PAG talks
- 19:4819:48, 19 January 2018 diff hist 0 N File:2018 PAG Wed 1 17.pdf No edit summary current
- 19:4619:46, 19 January 2018 diff hist 0 N File:CyVerseAssemblyHubsPAG2018.pdf No edit summary current
- 19:4619:46, 19 January 2018 diff hist +819 Presentations →2018
- 19:4419:44, 19 January 2018 diff hist +3 Presentations →2018
- 19:4319:43, 19 January 2018 diff hist −1 Presentations →2018
- 19:4319:43, 19 January 2018 diff hist −1 Presentations →2018
- 19:4319:43, 19 January 2018 diff hist 0 Presentations →2018
- 19:4219:42, 19 January 2018 diff hist −1 Presentations →2018
- 19:4119:41, 19 January 2018 diff hist 0 N File:AssemblyHubsPAG2018.pdf No edit summary current
- 19:3419:34, 19 January 2018 diff hist +544 Presentations Adding PAG talk
- 19:3019:30, 19 January 2018 diff hist +10 Presentations No edit summary
16 January 2018
- 21:2221:22, 16 January 2018 diff hist +99 Assembly Hubs →Web Server: Adding link to New Hosting section on TH User Guide
15 January 2018
- 00:1500:15, 15 January 2018 diff hist −1 Assembly Hubs →Assembly Hub Resources
- 00:1500:15, 15 January 2018 diff hist −79 Assembly Hubs →Assembly Hub Resources
- 00:1400:14, 15 January 2018 diff hist +49 Assembly Hubs →Assembly Hub Resources
- 00:1400:14, 15 January 2018 diff hist −70 Assembly Hubs →Assembly Hub Resources
- 00:1300:13, 15 January 2018 diff hist +258 Assembly Hubs restructuring to have an assembly hub resources section
- 00:0900:09, 15 January 2018 diff hist +588 Assembly Hubs →Building Tracks: Adding a G-OnRamp section
6 December 2017
- 23:2623:26, 6 December 2017 diff hist −72 Presentations →2017
- 20:4420:44, 6 December 2017 diff hist −4 Presentations →2017
- 20:4420:44, 6 December 2017 diff hist +160 Presentations →2017: Adding Jorge Talk
- 20:4220:42, 6 December 2017 diff hist +46 Presentations →2010: Adding Jorge 2017 Browser Map
- 20:4120:41, 6 December 2017 diff hist +36 N File:Browsermap2017.pdf Jorge Presentation of Browser Layout current
29 November 2017
- 17:3717:37, 29 November 2017 diff hist +5 Genome Browser Software Features →5 December 2017, v358
- 17:3617:36, 29 November 2017 diff hist 0 Genome Browser Software Features →5 December 2017, v358
- 17:3517:35, 29 November 2017 diff hist +23 Genome Browser Software Features →5 December 2017, v358
- 17:3317:33, 29 November 2017 diff hist +951 Genome Browser Software Features →2017: v358 summaries.
31 October 2017
- 20:5620:56, 31 October 2017 diff hist −1 Genome Browser Software Features →v357, 7 November 2017
- 20:5520:55, 31 October 2017 diff hist −1 Genome Browser Software Features →7 November 2017, v357
- 20:2420:24, 31 October 2017 diff hist +6 Genome Browser Software Features →7 November 2017, v357
- 19:0819:08, 31 October 2017 diff hist +129 Genome Browser Software Features →2017
30 October 2017
- 23:2223:22, 30 October 2017 diff hist +13 Genome Browser Software Features →7 November 2017, v357
- 23:2123:21, 30 October 2017 diff hist +8 Genome Browser Software Features →7 November 2017, v357
- 23:2023:20, 30 October 2017 diff hist −1 Genome Browser Software Features →5 November 2017, v357
- 23:2023:20, 30 October 2017 diff hist +658 Genome Browser Software Features →2017: v357 code summaries
25 October 2017
- 18:3918:39, 25 October 2017 diff hist +1 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt
- 18:3418:34, 25 October 2017 diff hist +4 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt
- 18:3018:30, 25 October 2017 diff hist +10 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt: changes to update to ncbi links
- 18:2918:29, 25 October 2017 diff hist +15 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt
- 18:2718:27, 25 October 2017 diff hist −3 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt
- 17:1517:15, 25 October 2017 diff hist +12 Assembly Hubs →Example loading African bush elephant assembly hub and looking at the related genomes.txt and trackDb.txt
- 17:1417:14, 25 October 2017 diff hist −2 Assembly Hubs →Example NCBI assembly hubs
- 17:1417:14, 25 October 2017 diff hist +410 Assembly Hubs →Example NCBI assembly hubs
- 17:0217:02, 25 October 2017 diff hist +3,276 Assembly Hubs →Example NCBI assembly hubs
- 16:3616:36, 25 October 2017 diff hist +109 Assembly Hubs →Example NCBI assembly hubs
- 16:3416:34, 25 October 2017 diff hist +23 Assembly Hubs →Example NCBI assembly hubs
- 16:3316:33, 25 October 2017 diff hist +6 Assembly Hubs →Example NCBI assembly hubs
- 16:3016:30, 25 October 2017 diff hist +574 Assembly Hubs →Example working assembly hubs: adding warning note about prototype status.
- 16:2516:25, 25 October 2017 diff hist +3,593 m Assembly Hubs →Example working assembly hubs: adding table to link to various assembly hub landing pages
- 16:0316:03, 25 October 2017 diff hist +36 Assembly Hubs →Adding BLAT servers: Adding new section about example assembly hubs pointing to Hiram's collection
10 October 2017
- 22:3322:33, 10 October 2017 diff hist +81 Genome Browser Software Features →17 October 2017, v356
- 22:3022:30, 10 October 2017 diff hist +406 Genome Browser Software Features →2017: v356 summaries step1
20 September 2017
- 19:1119:11, 20 September 2017 diff hist +501 Genome Browser Software Features →2017: v355 summaries
30 August 2017
- 18:0518:05, 30 August 2017 diff hist +613 Genome Browser Software Features →2017: v354
14 August 2017
- 19:5019:50, 14 August 2017 diff hist −2 Genes in gtf or gff format →Mailing List Resources about GTF
- 19:4919:49, 14 August 2017 diff hist +525 Genes in gtf or gff format Adding some example connections to the MLQ where we have a lot of resources.
9 August 2017
8 August 2017
- 22:3122:31, 8 August 2017 diff hist +623 Genome Browser Software Features →2017: v353 summary addition
21 July 2017
- 20:3520:35, 21 July 2017 diff hist +264 Genome Browser Software Features →2017: adding v352 summary
28 June 2017
- 16:2616:26, 28 June 2017 diff hist +567 Genome Browser Software Features →13 June 2017, v350: v351 summary
12 June 2017
- 15:0115:01, 12 June 2017 diff hist 0 Genome Browser Software Features →12 June 2017, v350
- 15:0015:00, 12 June 2017 diff hist +832 Genome Browser Software Features →22 May 2017, v349: Adding v350 summary.
22 May 2017
- 17:0117:01, 22 May 2017 diff hist +1,558 Genome Browser Software Features →2017: v349 summary additions.
26 April 2017
- 22:5822:58, 26 April 2017 diff hist +244 Genome Browser Software Features →2 May 2017, v348: improving v348 summary
- 21:2121:21, 26 April 2017 diff hist +348 Genome Browser Software Features →2017: v348 first pass
20 April 2017
- 20:3120:31, 20 April 2017 diff hist −91 Public Hub Guidelines Undo revision 23995 by Brian Lee (talk) see now that the full-text suggestion was ther
- 20:3020:30, 20 April 2017 diff hist +91 Public Hub Guidelines →Required Guidelines: adding a note that descriptionUrl can be an article, even though that isn't as good as building a page of search terms.
24 March 2017
- 18:1618:16, 24 March 2017 diff hist +93 Genome Browser Software Features →21 March 2017, v346: spelling out the new shortcuts "h m" and "h c" in v346
- 18:0418:04, 24 March 2017 diff hist +2 Genome Browser Software Features →21 Mar 2017, v346: changing Mar to March to match page's style
- 18:0318:03, 24 March 2017 diff hist +383 Genome Browser Software Features →2017: adding v346 updates
17 March 2017
- 21:3021:30, 17 March 2017 diff hist +35 Genes in gtf or gff format →Use genePredToGtf with a downloaded genePred table: edit to suggest named subsection to enable link
- 21:0221:02, 17 March 2017 diff hist +4 Genes in gtf or gff format →Using Table Browser output as input for the genePredToGtf: correcting mention of GTF as input to genPredToGtf where it should be genPred
14 March 2017
- 15:5315:53, 14 March 2017 diff hist −1 Public Hub Guidelines →Help for connection issues: updating genome-euro from 129.70.40.120 to 129.70.40.99
6 March 2017
- 20:5720:57, 6 March 2017 diff hist +190 Genome Browser Software Features →28 Feb 2017, v345: sharing more details about labelFields
23 February 2017
- 21:0721:07, 23 February 2017 diff hist −66 Genome Browser Software Features →28 Feb 2017, v345: removing mention of security changes
- 21:0621:06, 23 February 2017 diff hist −35 Genome Browser Software Features →28 Feb 2017, v345: editing one note in v345.
- 21:0421:04, 23 February 2017 diff hist +449 Genome Browser Software Features →2017: summarizing v345
8 February 2017
- 00:1300:13, 8 February 2017 diff hist +279 Genome Browser Software Features →2017: Adding v345 notes
2 February 2017
- 01:0601:06, 2 February 2017 diff hist +115 Assembly Hubs →Cytoband Track: Link to example trackDb.txt
- 01:0401:04, 2 February 2017 diff hist +99 Assembly Hubs →Cytoband Track: Noting banding options: gneg gpos25 gpos50 gpos75 gpos100 acen gvar stalk
- 00:4700:47, 2 February 2017 diff hist +122 Assembly Hubs →Cytoband Track: adding example .as file for cytobandIdeo
- 00:4100:41, 2 February 2017 diff hist +735 Assembly Hubs →Building Tracks: Adding info about cytoband track.
1 February 2017
- 22:3922:39, 1 February 2017 diff hist +779 Assembly Hubs →Adding BLAT servers: Adding a subsection about the memory requirement for gfServers
20 January 2017
- 22:0822:08, 20 January 2017 diff hist +99 Presentations →2017
- 22:0622:06, 20 January 2017 diff hist +1 Presentations →2017
- 22:0522:05, 20 January 2017 diff hist +108 Presentations →2017
- 22:0322:03, 20 January 2017 diff hist +4 Presentations →2017
- 22:0222:02, 20 January 2017 diff hist −4 Presentations →2017
- 22:0122:01, 20 January 2017 diff hist +40 N File:AssemblyHubsUCSC.pdf Brian Lee PAG 2017 Talk on Assembly Hubs current
- 21:5821:58, 20 January 2017 diff hist +272 Presentations →2017
12 January 2017
- 18:0018:00, 12 January 2017 diff hist +455 Genome Browser Software Features adding 2017 and v343
7 December 2016
- 23:5223:52, 7 December 2016 diff hist −29 Genome Browser Software Features →13 Dec 2016, v342
- 23:4923:49, 7 December 2016 diff hist +1,068 Genome Browser Software Features →2016: v342
10 November 2016
- 21:5221:52, 10 November 2016 diff hist +828 Genome Browser Software Features adding v341
20 October 2016
- 00:0500:05, 20 October 2016 diff hist +295 Genome Browser Software Features →2016: v340 notes
29 September 2016
- 21:2621:26, 29 September 2016 diff hist +511 Genome Browser Software Features →2016: v339 entry
7 September 2016
- 23:5423:54, 7 September 2016 diff hist +907 Genome Browser Software Features →2016: adding v338
29 August 2016
- 21:1121:11, 29 August 2016 diff hist +314 Assembly Hubs →genomes.txt: adding recommendations for defaultPos , scientificName, organism, description
- 21:0321:03, 29 August 2016 diff hist −6 Public Hub Guidelines →Guidelines for User Experience:: restructure added info.
- 20:5920:59, 29 August 2016 diff hist +252 Public Hub Guidelines →Guidelines for User Experience:: adding suggestions assembly hubs have defaultPos , scientificName, organism, description
26 August 2016
- 16:4616:46, 26 August 2016 diff hist +157 N File:ACMGposter2016.pdf Luvina Guruvado presented poster about about accessing variation data in the GBiB and Data Integrator at the Annual Clinical Genetics Meeting (ACGM) in Tampa current
- 16:4316:43, 26 August 2016 diff hist +210 Presentations →2016: Adding entry for Luvina's poster at ACGM
- 16:3716:37, 26 August 2016 diff hist +61 N File:CIRMposter2016.pdf Clay Fischer poster presented at the 2nd Annual CIRM retreat current
- 16:3616:36, 26 August 2016 diff hist +113 Presentations →2016: adding CIRM poster by Clay
24 August 2016
- 22:5422:54, 24 August 2016 diff hist +815 Resolving merge conflicts in Git Adding link info to a repository to test having a merge conflict. current
- 22:4422:44, 24 August 2016 diff hist +384 Getting Started With Git Adding link to GitHub account
18 August 2016
- 00:1200:12, 18 August 2016 diff hist +11 Genome Browser Software Features →23 August 2016, v337
- 00:1100:11, 18 August 2016 diff hist −11 Genome Browser Software Features →23 August 2016, v337
- 00:1100:11, 18 August 2016 diff hist +591 Genome Browser Software Features →2016: v337
2 August 2016
- 21:5321:53, 2 August 2016 diff hist +91 Getting Started With Git →External git Documentation
- 16:4816:48, 2 August 2016 diff hist −4 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
- 16:4116:41, 2 August 2016 diff hist +280 Getting Started With Git →External git Documentation
27 July 2016
- 22:5422:54, 27 July 2016 diff hist +121 Genome Browser Software Features →2 August 2016, v336: refined entry
- 19:2919:29, 27 July 2016 diff hist +416 Genome Browser Software Features →2016: adding v336 summary
6 July 2016
- 16:2416:24, 6 July 2016 diff hist −3 Genome Browser Software Features →12 July 2016, v335
- 16:2316:23, 6 July 2016 diff hist +567 Genome Browser Software Features →2016
27 June 2016
- 20:0720:07, 27 June 2016 diff hist +71 Public Hub Guidelines →Help for connection issues: adding genome-asia.ucsc.edu genomebrowsermirror.riken.jp IP range 134.160.84.67
16 June 2016
15 June 2016
- 22:5522:55, 15 June 2016 diff hist +1 Genome Browser Software Features →21 June 2016, v334
- 22:5522:55, 15 June 2016 diff hist +240 Genome Browser Software Features →21 June 2016, v334
- 22:4822:48, 15 June 2016 diff hist −1 Genome Browser Software Features →21 June 2016, v334
- 22:4822:48, 15 June 2016 diff hist +289 Genome Browser Software Features →2016
4 May 2016
- 19:2719:27, 4 May 2016 diff hist +501 Genome Browser Software Features Adding v332 summaries
24 March 2016
- 17:0917:09, 24 March 2016 diff hist −1 Public Hub Guidelines No edit summary
10 March 2016
- 00:2100:21, 10 March 2016 diff hist +112 Public Hub Guidelines →Guidelines for User Experience:: Adding link to new hub template page.
11 February 2016
- 00:1600:16, 11 February 2016 diff hist +45 Presentations →2010: Adding a note that Jorge gave an updated overview of browser machine layout.
- 00:1400:14, 11 February 2016 diff hist +75 N File:Browsermap2016.pdf Jorge presentation in 2016 of computer layout, includes GBiB on final page. current
12 January 2016
- 19:0019:00, 12 January 2016 diff hist +307 HowTo: Syntenic Net or Reciprocal Best →Reciprocal Best: adding link to MLQ and goldenPath/hg19/vsMm10/reciprocalBest/ as more references. current
4 December 2015
24 November 2015
- 04:0004:00, 24 November 2015 diff hist +72 Working with Git →Useful resources current
21 November 2015
- 00:0900:09, 21 November 2015 diff hist +501 Assembly Hubs →Building Tracks: adding trackDb.txt example that has "group" setting.
2 October 2015
- 16:0016:00, 2 October 2015 diff hist +50 It's a long way to the RR Awesome page, Max, thanks for adding this! Added page categories
29 September 2015
- 21:4821:48, 29 September 2015 diff hist +362 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository: Adding quick Clone steps
- 21:4421:44, 29 September 2015 diff hist +67 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository
- 21:4421:44, 29 September 2015 diff hist +117 Getting Started With Git →Setting Up Your Own Personal Git Kent Repository: note about .gitconfig
25 August 2015
- 18:4318:43, 25 August 2015 diff hist +161 Assembly Hubs →genomes.txt: adding a note about URLs accepted in twoBitPath
11 May 2015
- 17:1817:18, 11 May 2015 diff hist +54 Assembly Hubs →Adding BLAT servers: links to genome-euro and genome
- 17:1517:15, 11 May 2015 diff hist +5 Assembly Hubs →Adding BLAT servers: adding note about IP ranges for blat servers
- 17:1417:14, 11 May 2015 diff hist +472 Assembly Hubs →Adding BLAT servers
7 May 2015
- 17:1417:14, 7 May 2015 diff hist +1 GBiB: From download to BLAT at assembly hubs typo fix
- 17:1317:13, 7 May 2015 diff hist +668 GBiB: From download to BLAT at assembly hubs Adding some references links
21 April 2015
- 18:2118:21, 21 April 2015 diff hist +222 Public Hub Guidelines →Guidelines for User Experience:: expanding descriptionUrl
27 March 2015
- 18:3318:33, 27 March 2015 diff hist +13 Whole genome alignment howto →Example, step 2: Chaining: changing pipermail to google group link
24 February 2015
- 19:0019:00, 24 February 2015 diff hist +268 Assembly Hubs →Adding BLAT servers
20 February 2015
- 21:0721:07, 20 February 2015 diff hist −14 Assembly Hubs →Adding BLAT servers
- 20:0920:09, 20 February 2015 diff hist +42 Assembly Hubs →Adding BLAT servers: based on MLQ, adding a note highlighting capital B in transBlat
30 January 2015
- 21:3421:34, 30 January 2015 diff hist 0 Assembly Hubs →Adding BLAT servers
- 18:5318:53, 30 January 2015 diff hist −28 Assembly Hubs →Adding BLAT servers: swapping MLQ link for new QuickStart page
- 18:4818:48, 30 January 2015 diff hist +4 Assembly Hubs →Web Server
- 18:4718:47, 30 January 2015 diff hist −9 Assembly Hubs →Web Server: adding link to Quick Start Guide
- 18:4718:47, 30 January 2015 diff hist +161 Assembly Hubs →Web Server
- 18:4518:45, 30 January 2015 diff hist +87 Assembly Hubs →Web Server: Adding note GBiB an option for assembly hubs
- 00:3300:33, 30 January 2015 diff hist +143 Assembly Hubs →Adding BLAT servers: adding link to example genomes.txt with blat lines
- 00:1400:14, 30 January 2015 diff hist −4 Assembly Hubs →Adding BLAT servers
- 00:1300:13, 30 January 2015 diff hist −13 Assembly Hubs →Adding BLAT servers: cleaning links added
- 00:1200:12, 30 January 2015 diff hist +365 Assembly Hubs →Adding BLAT servers: links to blat documents, gfserver binaries
29 January 2015
- 21:3821:38, 29 January 2015 diff hist −3 Assembly Hubs →hub.txt: adding descriptionUrl description
- 21:3721:37, 29 January 2015 diff hist +134 Assembly Hubs →hub.txt
21 January 2015
- 17:5417:54, 21 January 2015 diff hist +1 Assembly Hubs →Adding BLAT servers: edits on grammer
19 January 2015
- 23:5623:56, 19 January 2015 diff hist +50 Assembly Hubs →Adding BLAT servers: making correction to example.
- 23:5323:53, 19 January 2015 diff hist +26 Assembly Hubs →Adding BLAT servers
- 22:5522:55, 19 January 2015 diff hist −14 Assembly Hubs →Adding BLAT servers: fixing links
- 22:5422:54, 19 January 2015 diff hist +186 Running your own gfServer adding link to mailing list archives about gfServer for troubleshooting
- 22:4922:49, 19 January 2015 diff hist +1,917 Assembly Hubs New section about adding BLAT Servers
17 October 2014
- 19:5019:50, 17 October 2014 diff hist +1 Public Hub Guidelines →Help for connection issues:
- 19:4919:49, 17 October 2014 diff hist +7 Public Hub Guidelines →Help for connection issues:
- 19:4819:48, 17 October 2014 diff hist +638 Public Hub Guidelines No edit summary
2 July 2014
- 19:3419:34, 2 July 2014 diff hist +1,135 Using hgWiggle without a database No edit summary
- 18:3718:37, 2 July 2014 diff hist −176 Using hgWiggle without a database →The hgWiggle command
- 17:2517:25, 2 July 2014 diff hist −4 Using hgWiggle without a database →Download files from hgdownload
- 16:5216:52, 2 July 2014 diff hist +29 Using hgWiggle without a database →Download files from hgdownload
1 July 2014
- 19:4819:48, 1 July 2014 diff hist −1 Public Hub Guidelines →Guidelines for User Experience:
- 19:4819:48, 1 July 2014 diff hist +526 Public Hub Guidelines →Guidelines for User Experience:
25 June 2014
24 June 2014
6 June 2014
- 23:0523:05, 6 June 2014 diff hist +4 Public Hub Guidelines →Public Hub Examples
- 23:0523:05, 6 June 2014 diff hist −10 Public Hub Guidelines →Public Hub Examples
- 23:0223:02, 6 June 2014 diff hist +123 Public Hub Guidelines →Guidelines for User Experience:
14 November 2013
- 19:3419:34, 14 November 2013 diff hist +100 Adding New Tracks to a browser installation →Instructions for the older mirrors current
- 19:3319:33, 14 November 2013 diff hist +100 Talk:Implementation Notes →How to add a track to a mirror current
- 19:3119:31, 14 November 2013 diff hist 0 How to add a track to a mirror →MySQL Preliminaries current
- 19:3019:30, 14 November 2013 diff hist +100 How to add a track to a mirror →MySQL Preliminaries
- 19:2719:27, 14 November 2013 diff hist +22 Using hgWiggle without a database →Using the UCSC public MySQL server
- 19:2619:26, 14 November 2013 diff hist +1 Genes in gtf or gff format →genePredToGtf
- 19:2519:25, 14 November 2013 diff hist +21 Genes in gtf or gff format →genePredToGtf
27 August 2013
- 17:3017:30, 27 August 2013 diff hist 0 Public Hub Guidelines →Guidelines for User Experience:
- 17:3017:30, 27 August 2013 diff hist +324 Public Hub Guidelines →Suggestions for Public Hubs
- 17:2717:27, 27 August 2013 diff hist +221 Public Hub Guidelines →Guidelines for User Experience:
22 August 2013
- 18:3918:39, 22 August 2013 diff hist +9 Assembly Hubs →Web Server
- 18:3818:38, 22 August 2013 diff hist +80 Assembly Hubs →Web Server
- 18:1518:15, 22 August 2013 diff hist +13 Public Hub Guidelines →Suggestions for Public Hubs
- 18:1418:14, 22 August 2013 diff hist −4 Public Hub Guidelines →Suggestions for Public Hubs
- 18:1418:14, 22 August 2013 diff hist +141 Public Hub Guidelines →Suggestions for Public Hubs
18 August 2013
- 05:3005:30, 18 August 2013 diff hist +17 Public Hub Guidelines →Public Hub Examples
- 05:2805:28, 18 August 2013 diff hist +4 Public Hub Guidelines →Guidelines for Using Dimensions:
- 05:2705:27, 18 August 2013 diff hist +3 Public Hub Guidelines →Guidelines for Using Dimensions:
- 05:2505:25, 18 August 2013 diff hist +6 Public Hub Guidelines →Guidelines for User Experience:
- 05:2505:25, 18 August 2013 diff hist +22 Public Hub Guidelines →Guidelines for User Experience:
- 05:2405:24, 18 August 2013 diff hist +72 Public Hub Guidelines →Public Hub Examples
- 05:1905:19, 18 August 2013 diff hist +83 Public Hub Guidelines →Public Hub Examples
- 05:1105:11, 18 August 2013 diff hist −4 Public Hub Guidelines →Guidelines for Using Dimensions:
- 05:0905:09, 18 August 2013 diff hist +8 Public Hub Guidelines →Guidelines for Using Dimensions:
- 05:0905:09, 18 August 2013 diff hist −2 Public Hub Guidelines →Guidelines for Using Dimensions:
- 05:0705:07, 18 August 2013 diff hist +17 Public Hub Guidelines →Guidelines for Composites:
- 05:0605:06, 18 August 2013 diff hist +2 Public Hub Guidelines →Guidelines for User Experience:
- 05:0505:05, 18 August 2013 diff hist +20 Public Hub Guidelines →Guidelines for User Experience:
- 05:0105:01, 18 August 2013 diff hist +140 Public Hub Guidelines →Public Hub Examples
- 05:0005:00, 18 August 2013 diff hist +46 Public Hub Guidelines →Public Hub Examples
- 04:5804:58, 18 August 2013 diff hist +76 Public Hub Guidelines →Guidelines for Composites:
- 04:5704:57, 18 August 2013 diff hist −1 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:5604:56, 18 August 2013 diff hist +76 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:5504:55, 18 August 2013 diff hist +81 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:5304:53, 18 August 2013 diff hist +76 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:4704:47, 18 August 2013 diff hist +2 Public Hub Guidelines →Guidelines for Composites:
- 04:4604:46, 18 August 2013 diff hist +1 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:4404:44, 18 August 2013 diff hist +12 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:4404:44, 18 August 2013 diff hist +12 Public Hub Guidelines →Guidelines for Composites:
- 04:4204:42, 18 August 2013 diff hist +28 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:4004:40, 18 August 2013 diff hist +175 Public Hub Guidelines →Guidelines for Using Dimensions:
- 04:3804:38, 18 August 2013 diff hist −167 Public Hub Guidelines →Guidelines for Composites:
- 04:3704:37, 18 August 2013 diff hist +70 Public Hub Guidelines →Guidelines for Composites:
- 04:3104:31, 18 August 2013 diff hist +76 Public Hub Guidelines →Guidelines for User Experience:
- 04:3004:30, 18 August 2013 diff hist +167 Public Hub Guidelines →Guidelines for User Experience:
16 August 2013
- 22:0122:01, 16 August 2013 diff hist +18 Public Hub Guidelines →Guidelines for User Experience:
- 22:0122:01, 16 August 2013 diff hist +2 Public Hub Guidelines →Guidelines for User Experience:
- 22:0022:00, 16 August 2013 diff hist 0 Public Hub Guidelines →Guidelines for User Experience:
- 22:0022:00, 16 August 2013 diff hist +9 Public Hub Guidelines →Guidelines for User Experience:
- 21:5921:59, 16 August 2013 diff hist +7 Public Hub Guidelines →Guidelines for User Experience:
- 21:5921:59, 16 August 2013 diff hist +6 Public Hub Guidelines →Guidelines for User Experience:
- 21:5821:58, 16 August 2013 diff hist +40 Public Hub Guidelines →Guidelines for User Experience:
- 21:5721:57, 16 August 2013 diff hist +37 Public Hub Guidelines →Suggestions for Public Hubs
- 21:5621:56, 16 August 2013 diff hist +1,134 Public Hub Guidelines No edit summary
- 21:5121:51, 16 August 2013 diff hist +5 Public Hub Guidelines →Suggestions for Public Hubs
- 21:5121:51, 16 August 2013 diff hist −5 Public Hub Guidelines →Guidelines for dimensions:
- 21:4721:47, 16 August 2013 diff hist 0 Public Hub Guidelines No edit summary
- 21:4721:47, 16 August 2013 diff hist +17 Public Hub Guidelines No edit summary
- 21:4421:44, 16 August 2013 diff hist +9 Public Hub Guidelines No edit summary
- 21:2021:20, 16 August 2013 diff hist +2,973 N Public Hub Guidelines Created page with "Based on common problems seen in hubs, here are some recommendations from the UCSC Genome Browser engineers: * Have no more than 10 tracks on by default. * Have a description pag..."