User contributions for David da Silva Pires
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6 April 2017
- 17:4817:48, 6 April 2017 diff hist +51 GBiB: From download to BLAT at assembly hubs →Blat configuration: Fixing the working directory and warning about the capital 'B' in "transBlat".
- 17:0617:06, 6 April 2017 diff hist +76 GBiB: From download to BLAT at assembly hubs →Blat configuration: Creating a log directory and fixing gfServer commands.
- 13:0713:07, 6 April 2017 diff hist +35 m GBiB: From download to BLAT at assembly hubs →Track hub configuration: A better bedToBigBed command.
- 13:0513:05, 6 April 2017 diff hist +7 m GBiB: From download to BLAT at assembly hubs →Track hub configuration: Fixing the filename.
- 13:0313:03, 6 April 2017 diff hist +100 m GBiB: From download to BLAT at assembly hubs →Track hub configuration: Making a symbolic link for the eboVir3-chromSizes.txt file.
- 12:5812:58, 6 April 2017 diff hist +7 m GBiB: From download to BLAT at assembly hubs →Track hub configuration: Now eboVir3.agp file is in the output/ directory.
- 12:5712:57, 6 April 2017 diff hist +7 m GBiB: From download to BLAT at assembly hubs →Track hub configuration: The assembly.bed file should also go to the output/ directory.
- 12:5512:55, 6 April 2017 diff hist +160 GBiB: From download to BLAT at assembly hubs →Track hub configuration: Organizing the files in subdirectories.
- 12:4912:49, 6 April 2017 diff hist −90 GBiB: From download to BLAT at assembly hubs →Preparing the data: Simplifying the build of the chromSizes-sorted file.
- 12:4312:43, 6 April 2017 diff hist +11 GBiB: From download to BLAT at assembly hubs →Preparing the data: Simplifying the build of the .2bit file.
- 12:1112:11, 6 April 2017 diff hist −11 GBiB: From download to BLAT at assembly hubs Removing one pipe since awk can do the comparison and the printing in just one command. Simplifying the output filename.
- 11:5911:59, 6 April 2017 diff hist +395 GBiB: From download to BLAT at assembly hubs Building the AGP file only when needed: at assembly track configuration.
- 11:4111:41, 6 April 2017 diff hist 0 m GBiB: From download to BLAT at assembly hubs Changing to a better order the lines in the initial genomes.txt
21 July 2015
- 12:0212:02, 21 July 2015 diff hist +728 GBiB: From download to BLAT at assembly hubs Setting locale environment variables in order to provide a case-sensitive sort.
4 June 2015
- 01:0301:03, 4 June 2015 diff hist +115 GBiB: From download to BLAT at assembly hubs →Additional configuration: Incrementing the HTML description of a track.
- 00:4200:42, 4 June 2015 diff hist +107 GBiB: From download to BLAT at assembly hubs More additional configuration to genomes.txt.
- 00:3000:30, 4 June 2015 diff hist +60 GBiB: From download to BLAT at assembly hubs →Additional configuration: Additional configuration to genomes.txt.
- 00:2000:20, 4 June 2015 diff hist +66 GBiB: From download to BLAT at assembly hubs →Additional configuration: Additional configuration to hub.txt.
3 June 2015
- 13:4213:42, 3 June 2015 diff hist +295 GBiB: From download to BLAT at assembly hubs →Additional configuration: Adding an assembly hub through its URL.
- 11:1411:14, 3 June 2015 diff hist +3 GBiB: From download to BLAT at assembly hubs Moving "Custom track configuration" to "Additional configuration".