User contributions for Marygoldman
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8 February 2011
- 01:1101:11, 8 February 2011 diff hist −2 Releasing an assembly →Adjust the release log in main pushQ
- 01:1101:11, 8 February 2011 diff hist +7 Releasing an assembly →Email warning genome-mirror at least 24 hours before release
- 01:1001:10, 8 February 2011 diff hist +9 Releasing an assembly →Make sure no tables need to be repushed from hgwdev to hgwbeta
- 01:0901:09, 8 February 2011 diff hist +135 Releasing an assembly →Stage assembly on Round Robin
- 01:0401:04, 8 February 2011 diff hist +140 Releasing an assembly →Verify that liftOvers are in liftOvers directories and not in vs* Directories
- 01:0101:01, 8 February 2011 diff hist −13 Releasing an assembly →Verify downloads
- 00:5800:58, 8 February 2011 diff hist +42 Releasing an assembly →Check Blat and PCR
- 00:5500:55, 8 February 2011 diff hist +1 Releasing an assembly →Check that all of the MySQL tables are in good repair
- 00:5400:54, 8 February 2011 diff hist +2 Releasing an assembly →Check to make sure that none of the table names have underscores(_)
- 00:5400:54, 8 February 2011 diff hist −7 Releasing an assembly →Run featureBits to verify that the gold and gap tables together cover the entire genome
- 00:5300:53, 8 February 2011 diff hist −1 Releasing an assembly →Check indices
- 00:5200:52, 8 February 2011 diff hist +31 Releasing an assembly →Check indices
- 00:5000:50, 8 February 2011 diff hist +1 Releasing an assembly →Check that all tables in this database are mentioned in all.joiner
- 00:5000:50, 8 February 2011 diff hist +4 Releasing an assembly →joinerCheck
- 00:2600:26, 8 February 2011 diff hist −3 Releasing an assembly →Turn on GenBank updates
- 00:2000:20, 8 February 2011 diff hist +1 m Releasing an assembly →Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
- 00:2000:20, 8 February 2011 diff hist +103 Releasing an assembly →Review phylogenetic location in pull-down menus on hgGateway
- 00:1800:18, 8 February 2011 diff hist −6 m Releasing an assembly →Test on hgwbeta: re-ordering list
- 00:1600:16, 8 February 2011 diff hist +6 Releasing an assembly →Check the .2bit files
- 00:1300:13, 8 February 2011 diff hist −1 m Releasing an assembly →Push /gbdb/$db and html/description.html=
- 00:1300:13, 8 February 2011 diff hist −25 Releasing an assembly →Push files
- 00:0900:09, 8 February 2011 diff hist −4 Releasing an assembly →=genomeClade and gdbPdb
- 00:0800:08, 8 February 2011 diff hist −2 Releasing an assembly →genomeClade and gdbPdb
7 February 2011
- 23:5823:58, 7 February 2011 diff hist −3 Releasing an assembly →blatServers
- 23:4923:49, 7 February 2011 diff hist +28 Releasing an assembly →blatServers
- 23:4923:49, 7 February 2011 diff hist +20 Releasing an assembly →blatServers
- 23:4823:48, 7 February 2011 diff hist −194 Releasing an assembly →blatServers
- 23:4423:44, 7 February 2011 diff hist +2 Releasing an assembly →dbDb
- 23:4223:42, 7 February 2011 diff hist +29 Releasing an assembly →Push chain/net tables in other organisms
- 23:4123:41, 7 February 2011 diff hist −9 Releasing an assembly →Create database on hgwbeta and push tables for $db
- 23:3923:39, 7 February 2011 diff hist −27 Releasing an assembly →Create database on hgwbeta and push tables for $db
- 23:3823:38, 7 February 2011 diff hist +5 Releasing an assembly →Check if chromosome sizes have changed significantly
- 23:3423:34, 7 February 2011 diff hist −9 Releasing an assembly →Send email to markd and Jeltje van Baren: jeltje at cse.wustl.edu so that they can being doing their N-Scan predictions
- 23:3223:32, 7 February 2011 diff hist −3 Releasing an assembly →Check that there the chain/nets and liftOvers listed in the pushQ are to valid assemblies on the RR
2 February 2011
- 19:2219:22, 2 February 2011 diff hist +1 m Replacing old tables with new ones →Example: adding a -N to the mysql command so that you don't get the table title in the file
20 January 2011
- 22:0022:00, 20 January 2011 diff hist +228 m Working with branches in Git →How do I make a branch?: adding clarification as to why you should preface your branch name with your user name
- 21:5821:58, 20 January 2011 diff hist −16 m Working with branches in Git →How do I make a branch?: removing confusing comment about "noted above"
19 January 2011
- 23:4623:46, 19 January 2011 diff hist −8 m Releasing an assembly →Next day follow-up
- 23:4523:45, 19 January 2011 diff hist −4 m Releasing an assembly →Enable Assembly on RR and post-release follow-up: formatting
- 23:4423:44, 19 January 2011 diff hist −3 m Releasing an assembly →Stage assembly on Round Robin: formatting
- 23:4423:44, 19 January 2011 diff hist −8 m Releasing an assembly →Verify the downloads: formatting
- 23:3523:35, 19 January 2011 diff hist −1 m Releasing an assembly →Check that all of the MySQL tables are in good repair: formatting
- 23:3423:34, 19 January 2011 diff hist −2 m Releasing an assembly →Make sure that there is a liftOver file from the previous assembly to this assembly: formatting
- 23:3423:34, 19 January 2011 diff hist −9 m Releasing an assembly →Check to make sure that none of the table names have underscores(_): formatting
- 23:3423:34, 19 January 2011 diff hist −2 m Releasing an assembly →Check indices: formatting
- 23:3323:33, 19 January 2011 diff hist −2 m Releasing an assembly →Check that all tables in this database are mentioned in all.joiner=: formatting
- 23:3323:33, 19 January 2011 diff hist 0 m Releasing an assembly →Check that common keys between tables are in sync: formatting
- 23:3223:32, 19 January 2011 diff hist −2 m Releasing an assembly →Review phylogenetic location in pull-down menus on hgGateway: formatting
- 23:3123:31, 19 January 2011 diff hist −2 Releasing an assembly →Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
- 23:3123:31, 19 January 2011 diff hist −2 m Releasing an assembly →Turn on GenBank updates: formatting
- 23:3023:30, 19 January 2011 diff hist −1 m Releasing an assembly →Make trackDb on hgwbeta: formatting
- 23:3023:30, 19 January 2011 diff hist −2 m Releasing an assembly →Push image file to hgwbeta and rr: formatting
- 23:2223:22, 19 January 2011 diff hist −1 m Releasing an assembly →liftOverChain: formatting
- 23:2123:21, 19 January 2011 diff hist −61 m Releasing an assembly →blatServers: formatting
- 23:2023:20, 19 January 2011 diff hist −1 m Releasing an assembly →dbDb: formatting
- 23:1923:19, 19 January 2011 diff hist −1 m Releasing an assembly →Push chain/net tables in other organisms: formatting
- 23:1923:19, 19 January 2011 diff hist −9 m Releasing an assembly →Create database on hgwbeta and push tables for $db: formatting
- 23:1723:17, 19 January 2011 diff hist −2 m Releasing an assembly →Check if chromosome sizes have changed significantly: formatting
- 23:1123:11, 19 January 2011 diff hist +25,917 N Releasing an assembly New page: ==Pre-staging of assembly on hgwbeta== ===Check if chromosome sizes have changed significantly=== * If you are releasing an update assembly, check to see if chromosome sizes have changed ...
14 January 2011
- 23:4423:44, 14 January 2011 diff hist +25 BlastTabs adding browserQA category link
- 00:5400:54, 14 January 2011 diff hist +2 m CGI Build Process changed reference to two-week schedule to be three-week schedule
- 00:0900:09, 14 January 2011 diff hist +96 Working with Git →'git log [path/fileName]': adding a bit of clarification to Galt's edit
13 January 2011
- 19:4419:44, 13 January 2011 diff hist +33 m CGI Testing →hgGene
12 January 2011
- 01:2601:26, 12 January 2011 diff hist +9 Working with branches in Git →How do I share my branch with others for team development?
- 01:2501:25, 12 January 2011 diff hist +86 Working with branches in Git →Three types of projects you might to do in a development branch
- 01:2401:24, 12 January 2011 diff hist +1 Working with branches in Git →Why use branches
- 01:2401:24, 12 January 2011 diff hist −1,017 Working with branches in Git →Introduction
- 01:2301:23, 12 January 2011 diff hist +580 Working with branches in Git →How we use branches in our group
- 01:1701:17, 12 January 2011 diff hist +346 Working with branches in Git →The nitty gritty
- 01:1601:16, 12 January 2011 diff hist +4 Working with branches in Git →How do I ...
- 01:0801:08, 12 January 2011 diff hist −21 Working with branches in Git →How do I share my branch with others for team development?
- 01:0201:02, 12 January 2011 diff hist +170 Working with branches in Git →How do I share my branch with others for team development?
- 00:3200:32, 12 January 2011 diff hist +9 Working with branches in Git →FAQ
10 January 2011
- 18:0318:03, 10 January 2011 diff hist 0 Working with branches in Git →How do I share my branch with others for team development?
- 18:0318:03, 10 January 2011 diff hist −6 Working with branches in Git →How do I share my branch with others for team development on it?
- 18:0218:02, 10 January 2011 diff hist +35 Working with branches in Git →How do I make a branch?
- 17:5917:59, 10 January 2011 diff hist −2 Working with branches in Git →Why use branches
- 17:5717:57, 10 January 2011 diff hist +6 Working with branches in Git →Why use branches
7 January 2011
- 19:3219:32, 7 January 2011 diff hist −25 Working with branches in Git →What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
- 19:3219:32, 7 January 2011 diff hist −11 Working with branches in Git →What do I do if I'm in the middle of a project on another branch and I need to do quickly make some minor change to the main branch (master)?
- 19:3119:31, 7 January 2011 diff hist +365 Working with branches in Git →How do I push my branch back to the main repository, so other people can work on my branch too?
- 19:2619:26, 7 January 2011 diff hist +130 Working with branches in Git →How do I commit only to the branch I am working on?: adding clarification
- 19:2519:25, 7 January 2011 diff hist +2 Working with branches in Git →FAQ: rearranging order of questions
- 19:2419:24, 7 January 2011 diff hist +20 Working with branches in Git →How do I push out my changes back onto the mainstream of development?
- 19:2319:23, 7 January 2011 diff hist +1 Working with branches in Git →How do I delete a branch?
- 19:2119:21, 7 January 2011 diff hist +85 Working with branches in Git →Why use branches
- 19:2019:20, 7 January 2011 diff hist −2 Working with branches in Git →Why use branches
- 19:2019:20, 7 January 2011 diff hist −42 Working with branches in Git →Why use branches
- 19:1919:19, 7 January 2011 diff hist −6 Working with branches in Git →Why use branches
- 19:0919:09, 7 January 2011 diff hist +58 Working with Git →Definitions
- 19:0919:09, 7 January 2011 diff hist −8 Working with branches in Git →How do I make a branch?
- 19:0819:08, 7 January 2011 diff hist −9 Working with branches in Git →Overview on how to use branches
- 19:0719:07, 7 January 2011 diff hist +13 Working with branches in Git →Why use branches
- 19:0519:05, 7 January 2011 diff hist +70 Working with branches in Git →What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
- 19:0419:04, 7 January 2011 diff hist +1 Working with branches in Git →How do I move between branches?
- 19:0419:04, 7 January 2011 diff hist +18 Working with branches in Git →How do I move between branches?
- 19:0219:02, 7 January 2011 diff hist +31 Working with branches in Git →How do I move between branches?
- 19:0019:00, 7 January 2011 diff hist +255 Working with branches in Git →What do I do if I'm in the middle of a project on another branch and I need to do quickly make some minor change to the main branch (master)?
- 18:5818:58, 7 January 2011 diff hist +23 Working with branches in Git →How do I keep my branch up to date?
- 18:5718:57, 7 January 2011 diff hist +48 Working with branches in Git →How do I keep my branch up to date?
- 18:5618:56, 7 January 2011 diff hist +56 Working with branches in Git →How do I delete a branch?
- 00:3100:31, 7 January 2011 diff hist −9 Working with branches in Git →What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
- 00:3000:30, 7 January 2011 diff hist +4 Working with branches in Git →How do I delete a branch?
- 00:2900:29, 7 January 2011 diff hist +2 Working with branches in Git →How do I know which branch am I on?
- 00:2900:29, 7 January 2011 diff hist +3 Working with branches in Git →How do I move between branches?
- 00:2900:29, 7 January 2011 diff hist +1 Working with branches in Git →How do I make a branch?
- 00:2800:28, 7 January 2011 diff hist +1 Working with branches in Git →How do I delete a branch?
- 00:2800:28, 7 January 2011 diff hist −1 m Working with branches in Git →Introduction: moving important information to a more prominent location
6 January 2011
- 23:5723:57, 6 January 2011 diff hist +5,983 N Working with branches in Git page creation
4 January 2011
- 02:2102:21, 4 January 2011 diff hist +2 m BlastTabs →How to QA blastTabs
- 02:2002:20, 4 January 2011 diff hist 0 BlastTabs →Very general overview on how blastTabs are made:: correct mis-information
- 02:1902:19, 4 January 2011 diff hist −1 m BlastTabs →What are the blastTabs tables: spelling
- 02:1802:18, 4 January 2011 diff hist +10 m BlastTabs →When to update blastTabs: making title more descriptive
- 02:1802:18, 4 January 2011 diff hist +11 m BlastTabs →What are blastTabs: making title more descriptive
- 02:1402:14, 4 January 2011 diff hist −6 BlastTabs →How to QA blastTabs: Unbolding last sentence so looks nicer
- 02:1302:13, 4 January 2011 diff hist −3 BlastTabs →When to update blastTabs: grammar edit
- 02:1102:11, 4 January 2011 diff hist +54 QAing UCSC Genes Adding link to new blastTabs page
- 02:0902:09, 4 January 2011 diff hist −23 Ensembl QA removing browserQA category link. Also, last commit was adding link to new blastTab page
- 02:0802:08, 4 January 2011 diff hist +4 Ensembl QA No edit summary
- 02:0702:07, 4 January 2011 diff hist +8,566 N BlastTabs page creation. Added in some of Brooke's comments already
29 December 2010
- 20:0420:04, 29 December 2010 diff hist −15 New Assembly Release Process Details →Stage and test on hgwbeta: correcting file path for making etc-update-rr for genbank updates
- 20:0220:02, 29 December 2010 diff hist +130 New Assembly Release Process Details →Push Data to Round Robin from hgwbeta: adding better documentation about how to get genbank tables
16 December 2010
- 00:1700:17, 16 December 2010 diff hist +155 Ensembl QA adding bit about watchin for blast tabs
9 December 2010
- 19:5319:53, 9 December 2010 diff hist −2 m CGI Testing →hgVisiGene: editing formating so looks better
3 December 2010
- 18:3418:34, 3 December 2010 diff hist +929 CGI Testing →hgTrackUi: finishing out edits
- 18:1218:12, 3 December 2010 diff hist −13 m CGI Testing →hgTrackUi: editing formatting so looks nicer
- 18:1018:10, 3 December 2010 diff hist +627 CGI Testing →hgTrackUi: adding tracks that are good to always test. saving and will be adding more info in next save
- 18:0118:01, 3 December 2010 diff hist +4 m CGI Testing separating out hgTrackUi so that I can add more details
- 18:0018:00, 3 December 2010 diff hist +88 m CGI Testing →hgBlat: adding point about testing the limits of blat
- 17:5817:58, 3 December 2010 diff hist +253 m CGI Testing →hgPcr: adding details
29 October 2010
- 16:1816:18, 29 October 2010 diff hist −4 Pushing trackDb changed incorrect reference to the hive to be gbdb
25 October 2010
- 23:3023:30, 25 October 2010 diff hist +13 Chains and Nets QA →After QAing on hgwbeta: Pushing to the RR: browser tree now in kent tree, clarification as to when to drop tables
22 October 2010
- 18:5318:53, 22 October 2010 diff hist +233 New Assembly Release Process Details →Stage and test on hgwbeta: added bit about where blat servers should be hosted
- 18:4918:49, 22 October 2010 diff hist +640 Updating blat servers adding information about new blat servers and where they are located
21 October 2010
- 17:1817:18, 21 October 2010 diff hist +227 Updating blat servers updating with Brooke's suggestions. Mainly that we stop testing beta so throughly
13 October 2010
- 16:5616:56, 13 October 2010 diff hist +134 New Assembly Release Process Details →Stage and test on hgwbeta: adding bit to check that gold and gap tables cover the entire genome
29 September 2010
- 20:2620:26, 29 September 2010 diff hist +110 Presentations →2010
- 20:2320:23, 29 September 2010 diff hist +25 N File:2010-09-29 - Genecats.pdf Andy Pohl's genecats talk current
7 September 2010
- 17:4517:45, 7 September 2010 diff hist +253 CGI Testing adding bit about hgApi
1 September 2010
- 19:1619:16, 1 September 2010 diff hist +403 Conservation Track QA adding bit about checking Frames table
30 August 2010
- 23:5923:59, 30 August 2010 diff hist +307 Providing remote audio for a meeting added where mic and laptop are current
25 August 2010
- 22:4122:41, 25 August 2010 diff hist +171 m Presentations uploading audio from Ann's presentation
- 22:4022:40, 25 August 2010 diff hist +19 N File:Genecats082510.mp3 rolling out redmine current
11 August 2010
- 18:4518:45, 11 August 2010 diff hist +19 Working with Git →Definitions: making the first word bold
- 18:3818:38, 11 August 2010 diff hist −37 Working with Git →Fixing un-wanted changes
- 18:3318:33, 11 August 2010 diff hist −4 Working with Git →Commit IDs and Referring ancestors
- 18:3218:32, 11 August 2010 diff hist +1,650 Working with Git →Referring ancestors (aka previous commits)
- 18:1018:10, 11 August 2010 diff hist −34 Working with Git →Git structure: putting synonyms up in defs and added section that will add to in a bit
- 17:4617:46, 11 August 2010 diff hist +12 Working with Git →'git merge'
- 17:3917:39, 11 August 2010 diff hist −3 Working with Git →'git show [--stat] commitID[:path/fileName]'
- 17:2217:22, 11 August 2010 diff hist −46 Working with Git →Fixing un-wanted changes
- 17:2217:22, 11 August 2010 diff hist +17 Working with Git →Fixing un-wanted changes
- 17:1617:16, 11 August 2010 diff hist −2 Working with Git →'git commit -m "some message" fileName(s)'
- 17:1417:14, 11 August 2010 diff hist +23 Working with Git →Terms that can refer to multiple things
- 17:1317:13, 11 August 2010 diff hist −35 Working with Git →'git push'
- 17:1117:11, 11 August 2010 diff hist +9 Working with Git →Other good things to know
- 16:5216:52, 11 August 2010 diff hist +6 Working with Git →Other good things to know
- 16:4816:48, 11 August 2010 diff hist −2 Working with Git →'git log [path/fileName]': typo
- 16:4816:48, 11 August 2010 diff hist +21 Working with Git →Other good things to know
- 16:4616:46, 11 August 2010 diff hist +45 Working with Git →'git log [path/fileName]'
- 16:4116:41, 11 August 2010 diff hist +25 Working with Git →Fixing un-wanted changes
- 16:4016:40, 11 August 2010 diff hist +31 m Working with Git formatting: making the command names smaller
- 16:3716:37, 11 August 2010 diff hist +335 Working with Git moving warning message
- 16:2516:25, 11 August 2010 diff hist −9 Working with Git →'git pull'
- 16:2116:21, 11 August 2010 diff hist 0 m Working with Git moving git blame into better parent category
- 16:1716:17, 11 August 2010 diff hist −23 Working with Git →'git pull'
- 16:1616:16, 11 August 2010 diff hist +93 Working with Git →'git rm fileName'
- 16:1516:15, 11 August 2010 diff hist −101 Working with Git →'git add fileName'
- 01:0701:07, 11 August 2010 diff hist −96 Working with Git little edits plus making the commit-ID-interchangeable-with-HEAD thing at the end
10 August 2010
- 22:2222:22, 10 August 2010 diff hist +243 m Working with Git editing git fetch, merge and stash
- 22:1322:13, 10 August 2010 diff hist +2 Working with Git →Useful resources
- 22:1222:12, 10 August 2010 diff hist +182 m Working with Git adding useful resources
- 22:0722:07, 10 August 2010 diff hist −190 m Working with Git No edit summary
- 22:0422:04, 10 August 2010 diff hist +9,388 N Working with Git New page: ==Git structure== ===Definitions=== central repository – The main repository we all share. This is where we push files for everyone to use. Contains a history of everyone’s commits t...
- 17:4217:42, 10 August 2010 diff hist +1 m Providing remote audio for a meeting missing parenthesis
29 July 2010
- 20:5120:51, 29 July 2010 diff hist +3 Replacing old tables with new ones accidentially reference hgwdev rather than hgwbeta
- 00:0300:03, 29 July 2010 diff hist +2,025 N Providing remote audio for a meeting adding page
28 July 2010
- 16:5916:59, 28 July 2010 diff hist +61 m New Assembly Release Process Details added step about running doGenbankTests
26 July 2010
- 17:5717:57, 26 July 2010 diff hist +170 New Assembly Release Process Details adding updating hgcentral.sql from checklist page to here
- 17:3917:39, 26 July 2010 diff hist +95 Ensembl QA added line about doing regular QA in addition to what is on this page
- 17:3217:32, 26 July 2010 diff hist −194 Ensembl QA removed reference to script that isn't useful. Tidied up language.
22 July 2010
- 21:1121:11, 22 July 2010 diff hist +237 CBSE citation format adding information about how to cite a paper within text and to make citations alphabetical
21 July 2010
- 23:2123:21, 21 July 2010 diff hist +152 Ensembl QA Adding point about looking at hgFixed, as well as numbering
- 23:1723:17, 21 July 2010 diff hist +55 m Ensembl QA adding categories
- 23:1723:17, 21 July 2010 diff hist +353 N Ensembl QA page creation
- 21:1121:11, 21 July 2010 diff hist +23 New track checklist little edits
16 July 2010
- 22:4922:49, 16 July 2010 diff hist +30 m UCSC Genes Staging Process adding Category:Browser QA tracks
- 22:4822:48, 16 July 2010 diff hist +30 m SNP Track QA adding Category:Browser QA tracks
- 22:4822:48, 16 July 2010 diff hist +30 m QAing UCSC Genes adding Category:Browser QA tracks
- 22:4722:47, 16 July 2010 diff hist +30 m New track checklist adding Category:Browser QA tracks
- 22:4622:46, 16 July 2010 diff hist +30 m Conservation Track QA adding Category:Browser QA tracks
- 22:4622:46, 16 July 2010 diff hist +87 N Category:Browser QA tracks New page: This category contains pages that give directions on how to QA a specific type of track current
- 22:4522:45, 16 July 2010 diff hist +30 m Chains and Nets QA adding Category:Browser QA tracks
- 22:3022:30, 16 July 2010 diff hist +292 New track checklist adding link to good page as well as Checking Length Labels
- 22:2722:27, 16 July 2010 diff hist +25 m Replacing old tables with new ones adding category: browser QA
14 July 2010
- 18:2318:23, 14 July 2010 diff hist +19 m SNP Track QA another edit to make it more clear
- 17:4117:41, 14 July 2010 diff hist +65 m SNP Track QA adding bit about runBits.csh
- 17:4017:40, 14 July 2010 diff hist +32 m SNP Track QA rewording a step so more clear
13 July 2010
- 23:1223:12, 13 July 2010 diff hist +24 m SNP Track QA making bullets look nicer
- 23:0923:09, 13 July 2010 diff hist +2,965 N SNP Track QA starting wiki page about QAing SNPs
30 June 2010
- 18:4018:40, 30 June 2010 diff hist +218 m CBSE citation format adding example for book chapter
- 17:0617:06, 30 June 2010 diff hist +297 Conservation Track QA added clarification for how to reach hgPal
25 June 2010
- 22:2722:27, 25 June 2010 diff hist +112 m Conservation Track QA adding clarification for the "Make sure that this page includes all the extra sections (if the multizs have been annotated)." section
23 June 2010
- 23:0823:08, 23 June 2010 diff hist +123 Presentations adding the audio from Ed Green's talk
- 23:0723:07, 23 June 2010 diff hist +658 N File:Genecats062310.mp3 At this week's genecats meeting, Ed Green will be giving the talk "Detecting positive selection in humans using the Neandertal genome". Description: We recently completed one-fold coverage of the Neandertal genome. Despite their 300,000 year old populati current
18 June 2010
- 23:1623:16, 18 June 2010 diff hist +25 m Internet browser testing adding category: browser QA
- 23:1523:15, 18 June 2010 diff hist +1,089 N Internet browser testing adding page to wiki
17 June 2010
- 21:3421:34, 17 June 2010 diff hist +182 Presentations adding audio for Steve Benz's advancement as well as slides and audio for larry's web 2.0 genecats
- 21:2821:28, 17 June 2010 diff hist 0 N File:Genecats061610.pdf No edit summary current
- 21:2521:25, 17 June 2010 diff hist 0 N File:Genecats061610.mp3 No edit summary current
- 21:2421:24, 17 June 2010 diff hist 0 N File:BenzAdvancement061510.mp3 No edit summary current
16 June 2010
- 00:1700:17, 16 June 2010 diff hist +49 m New Assembly Release Process Details made link and fixed typo
14 June 2010
- 21:5721:57, 14 June 2010 diff hist −1 m Conservation Track QA →To see the list of assemblies actually used to build the tracks:: changing path so correct
- 20:1720:17, 14 June 2010 diff hist +3 m Git: CVS equivalent operations fixing spacing for checking out a tree
10 June 2010
- 00:1700:17, 10 June 2010 diff hist +44 m Presentations adding link to partial audio for genecats 06.09.10
- 00:1500:15, 10 June 2010 diff hist +90 N File:Genecats060910.mp3 Last 45 min from Genecats on June 9th, 2010: Transition to Git. Galt Barber is presenting. current
3 June 2010
- 20:3720:37, 3 June 2010 diff hist +11 m Chains and Nets QA forgot to add hgdownload to one of the htdocs
21 May 2010
- 22:1922:19, 21 May 2010 diff hist −2 m Static content for new assemblies wrong preposition
- 22:1822:18, 21 May 2010 diff hist +88 Static content for new assemblies changing file path for downloads on hgwdev to be htdocs-hgdownload
- 22:1622:16, 21 May 2010 diff hist +97 New Release Checklist changing file path for downloads on hgwdev to be htdocs-hgdownload
- 22:1422:14, 21 May 2010 diff hist +11 m New Assembly Release Process Details forgot downloads.html was also put into htdocs-hgdownload
- 21:5621:56, 21 May 2010 diff hist −21 New Release Checklist changing link to 2bit reference in details page
- 21:5521:55, 21 May 2010 diff hist −75 New Assembly Release Process Details making it look nicer, taking out cruft. also adding tag for 2bit so can link to it from checklist
- 21:5021:50, 21 May 2010 diff hist +413 New Assembly Release Process Details changing file path for downloads on hgwdev to be htdocs-hgdownload
- 21:3821:38, 21 May 2010 diff hist +11 m New Release Checklist forgot to put in "goldenPath" in a path
- 21:3621:36, 21 May 2010 diff hist +526 New Assembly Release Process Details adding step to check blat servers and .2bit files
- 21:2821:28, 21 May 2010 diff hist +242 New Release Checklist adding step to check blat servers and .2bit files
12 May 2010
- 17:5317:53, 12 May 2010 diff hist +81 m New Release Checklist editing contacting Branwyn since no longer announcement page on cbse
3 May 2010
- 18:4518:45, 3 May 2010 diff hist +123 m New Assembly Release Process Details edited gbdb push so that don't push unnecessary files
- 18:4218:42, 3 May 2010 diff hist +317 m New Assembly Release Process Details adding things to look out for when doing hgcentral.liftOverChain
- 18:2818:28, 3 May 2010 diff hist +3 m Chains and Nets QA adding a -e to the hgsql statement
29 April 2010
- 20:4320:43, 29 April 2010 diff hist +161 m Chains and Nets QA added information about how to load data into mysql from a file
27 April 2010
- 17:2917:29, 27 April 2010 diff hist −1,039 New Assembly Release Process Details added page about static content and linked to it from here.
- 17:2717:27, 27 April 2010 diff hist +3,459 N Static content for new assemblies creating page
22 April 2010
- 18:2618:26, 22 April 2010 diff hist +1,863 N Updating blat servers created page on how to edit the blat server lines in hgcentral
21 April 2010
- 17:2617:26, 21 April 2010 diff hist −1 m New Release Checklist adding mark as contact for N-Scan predicitions track
12 April 2010
- 21:5021:50, 12 April 2010 diff hist +22 m New Assembly Release Process Details adding clarification for checking .2bit files
- 21:4621:46, 12 April 2010 diff hist −20 m New Assembly Release Process Details fixed it so some html tags don't show
- 21:3521:35, 12 April 2010 diff hist +481 New Assembly Release Process Details Added step of checking chrom sizes before staging on beta
31 March 2010
- 21:1421:14, 31 March 2010 diff hist +1 m Replacing old tables with new ones typo
- 21:1421:14, 31 March 2010 diff hist −6 m Replacing old tables with new ones changing so reflects changes to tri-state trackDb and editing so email says "table" rather than "db.table"
- 21:1221:12, 31 March 2010 diff hist +106 m Chains and Nets QA changing so reflects changes to tri-state trackDb
- 16:1616:16, 31 March 2010 diff hist −72 m Browser Installation changed reference to mysql 5 instead of mysql 4
25 March 2010
- 22:3622:36, 25 March 2010 diff hist 0 m Minimal Browser Installation making genome.ucsc.edu link work and taking comma out of link to Mirror Instructions
9 March 2010
- 22:0622:06, 9 March 2010 diff hist −31 Replacing old tables with new ones No edit summary
- 01:0301:03, 9 March 2010 diff hist −941 Chains and Nets QA Took out part of page relevant to all new tracks and created another page
- 01:0201:02, 9 March 2010 diff hist +2,343 N Replacing old tables with new ones creating page
8 March 2010
- 23:4623:46, 8 March 2010 diff hist −1 m Chains and Nets QA fixing some typos
5 March 2010
- 01:3101:31, 5 March 2010 diff hist +8 m Chains and Nets QA →After QAing on hgwbeta: Pushing to the RR: : little typo
- 01:2301:23, 5 March 2010 diff hist +2,179 Chains and Nets QA Same information, just restructured it to make sense. Also pulled some information from referenced webpages.