User contributions for Marygoldman

7 July 2011

• 23:0623:06, 7 July 2011 diff hist +39‎ CGI functions ‎ →‎hgNear
• 23:0623:06, 7 July 2011 diff hist +41‎ CGI functions ‎ →‎phyloGif
• 23:0523:05, 7 July 2011 diff hist +43‎ CGI functions ‎ →‎hgVisigene
• 23:0523:05, 7 July 2011 diff hist +39‎ CGI functions ‎ →‎hgTracks
• 23:0523:05, 7 July 2011 diff hist +41‎ CGI functions ‎ →‎hgTables
• 23:0423:04, 7 July 2011 diff hist +42‎ CGI functions ‎ →‎hgSession
• 23:0423:04, 7 July 2011 diff hist +38‎ CGI functions ‎ →‎hgPcr
• 23:0323:03, 7 July 2011 diff hist +43‎ CGI functions ‎ →‎hgLiftOver
• 23:0323:03, 7 July 2011 diff hist +41‎ CGI functions ‎ →‎hgGenome
• 23:0223:02, 7 July 2011 diff hist +42‎ CGI functions ‎ →‎hgGateway
• 23:0223:02, 7 July 2011 diff hist +42‎ CGI functions ‎ →‎hgCustom
• 23:0123:01, 7 July 2011 diff hist +39‎ CGI functions ‎ →‎hgBlat
• 22:5822:58, 7 July 2011 diff hist +204‎ CGI functions ‎ adding phyloGif
• 22:5522:55, 7 July 2011 diff hist −2‎ CGI functions ‎ →‎hgNear
• 22:5522:55, 7 July 2011 diff hist 0‎ CGI functions ‎ →‎hgc
• 22:5422:54, 7 July 2011 diff hist +1‎ m CGI functions ‎ →‎hgBlat
• 22:4522:45, 7 July 2011 diff hist 0‎ m CGI functions ‎ putting the cgis in alphabetical order
• 22:4022:40, 7 July 2011 diff hist −8‎ CGI functions ‎ →‎hgEncodeVocab
• 22:4022:40, 7 July 2011 diff hist −5‎ CGI functions ‎ →‎hgPal
• 22:4022:40, 7 July 2011 diff hist −5‎ m CGI functions ‎ →‎cartDump and cartReset
• 22:2822:28, 7 July 2011 diff hist +4,063‎ N CGI functions ‎ making this page about the CGIs for new staff as well as mirror managers

3 March 2011

• 00:4400:44, 3 March 2011 diff hist +172‎ Resolving merge conflicts in Git ‎ →‎Tools specifically for when git refuses to start merge
• 00:4200:42, 3 March 2011 diff hist +61‎ Resolving merge conflicts in Git ‎ →‎git reset
• 00:4000:40, 3 March 2011 diff hist +13‎ Resolving merge conflicts in Git ‎ →‎git status
• 00:3900:39, 3 March 2011 diff hist 0‎ Resolving merge conflicts in Git ‎ →‎How do I know which files have conflicts in them?
• 00:3900:39, 3 March 2011 diff hist +13‎ Resolving merge conflicts in Git ‎ →‎How do I know which files have conflicts in them?
• 00:3600:36, 3 March 2011 diff hist +114‎ Resolving merge conflicts in Git ‎ →‎Git can fail during the merge
• 00:3600:36, 3 March 2011 diff hist −18‎ Resolving merge conflicts in Git ‎ →‎Git can fail to start the merge
• 00:3500:35, 3 March 2011 diff hist +170‎ Resolving merge conflicts in Git ‎ →‎Git can fail to start the merge
• 00:3200:32, 3 March 2011 diff hist −397‎ Resolving merge conflicts in Git ‎ →‎git stash
• 00:3000:30, 3 March 2011 diff hist −88‎ Working with Git ‎ →‎'git merge'
• 00:3000:30, 3 March 2011 diff hist −22‎ Working with Git ‎ →‎'git pull'
• 00:2800:28, 3 March 2011 diff hist +267‎ Working with Git ‎ →‎'git stash'
• 00:2000:20, 3 March 2011 diff hist −4‎ Working with Git ‎ →‎'git stash'
• 00:1900:19, 3 March 2011 diff hist −63‎ Working with Git ‎ →‎'git pull'

2 March 2011

• 21:4321:43, 2 March 2011 diff hist +95‎ Resolving merge conflicts in Git ‎ →‎General tools
• 21:4121:41, 2 March 2011 diff hist +15‎ Resolving merge conflicts in Git ‎ →‎Tools specifically for when git conflicts arise during a merge
• 21:3521:35, 2 March 2011 diff hist −46‎ Resolving merge conflicts in Git ‎ →‎git checkout
• 21:3321:33, 2 March 2011 diff hist +2‎ Resolving merge conflicts in Git ‎ →‎How do I find conflicts within the file itself?
• 21:3221:32, 2 March 2011 diff hist +23‎ Resolving merge conflicts in Git ‎ →‎How do I know which files have conflicts in them?
• 21:2621:26, 2 March 2011 diff hist −2‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 21:2021:20, 2 March 2011 diff hist +37‎ Resolving merge conflicts in Git ‎ →‎Git refuses to start a merge/pull
• 21:1921:19, 2 March 2011 diff hist +82‎ Resolving merge conflicts in Git ‎ →‎Git refuses to start a merge/pull
• 21:1921:19, 2 March 2011 diff hist 0‎ Resolving merge conflicts in Git ‎ →‎Git is unable to resolve a merge/pull
• 21:1821:18, 2 March 2011 diff hist +89‎ Resolving merge conflicts in Git ‎ →‎Git is unable to resolve a merge/pull
• 21:1721:17, 2 March 2011 diff hist −49‎ m Resolving merge conflicts in Git ‎ →‎Git refuses to start a merge/pull
• 21:0621:06, 2 March 2011 diff hist −2‎ Resolving merge conflicts in Git ‎ →‎git status
• 21:0321:03, 2 March 2011 diff hist +1‎ Resolving merge conflicts in Git ‎ →‎git reset
• 21:0321:03, 2 March 2011 diff hist +1‎ Resolving merge conflicts in Git ‎ →‎git reset
• 21:0221:02, 2 March 2011 diff hist +86‎ Resolving merge conflicts in Git ‎ →‎git reset
• 20:5820:58, 2 March 2011 diff hist 0‎ Resolving merge conflicts in Git ‎ →‎git reset
• 20:5720:57, 2 March 2011 diff hist +273‎ Resolving merge conflicts in Git ‎ →‎Great tools to help you resolve a merge conflict
• 20:5020:50, 2 March 2011 diff hist −5‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 19:5619:56, 2 March 2011 diff hist +7‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 19:5519:55, 2 March 2011 diff hist +36‎ Resolving merge conflicts in Git ‎ →‎Common questions
• 01:2201:22, 2 March 2011 diff hist −1‎ Resolving merge conflicts in Git ‎ →‎Git is unable to resolve a merge/pull
• 01:2201:22, 2 March 2011 diff hist −1‎ Resolving merge conflicts in Git ‎ →‎Git refuses to start a merge/pull
• 01:2101:21, 2 March 2011 diff hist +229‎ Resolving merge conflicts in Git ‎ →‎Tools to help you resolve a merge conflict
• 01:1901:19, 2 March 2011 diff hist +1,322‎ Resolving merge conflicts in Git ‎ →‎Common questions
• 00:5100:51, 2 March 2011 diff hist +63‎ Resolving merge conflicts in Git ‎ adding a common questions section
• 00:4900:49, 2 March 2011 diff hist +59‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 00:4900:49, 2 March 2011 diff hist +9‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge can fail
• 00:4900:49, 2 March 2011 diff hist +558‎ Resolving merge conflicts in Git ‎ →‎Why would my Merge Fail?

25 February 2011

• 18:2318:23, 25 February 2011 diff hist +49‎ Conservation Track QA ‎ →‎QAing the track
• 17:3017:30, 25 February 2011 diff hist +19‎ m Conservation Track QA ‎ →‎QAing the track
• 01:4801:48, 25 February 2011 diff hist +147‎ Conservation Track QA ‎ →‎Check trackDb.ra file
• 01:2801:28, 25 February 2011 diff hist −1‎ Conservation Track QA ‎ →‎Make sure hgPal works with this set of tables:
• 01:2801:28, 25 February 2011 diff hist +34‎ Conservation Track QA ‎ →‎QAing the track: reorganizing
• 01:2201:22, 25 February 2011 diff hist −3‎ Conservation Track QA ‎ →‎Things we used to do to QA the conservation track but no longer do
• 01:1201:12, 25 February 2011 diff hist +78‎ Conservation Track QA ‎ →‎Preparing to QA
• 01:1101:11, 25 February 2011 diff hist +32‎ Conservation Track QA ‎ →‎Check one maf file
• 01:0601:06, 25 February 2011 diff hist +4‎ Conservation Track QA ‎ →‎QAing track
• 00:1400:14, 25 February 2011 diff hist +79‎ Conservation Track QA ‎ →‎Read both README files
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Contact Galaxy:
• 00:1100:11, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Make sure hgPal works with this set of tables:
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Test in the tables
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Test in the Genome Browser
• 00:1100:11, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Figure out extFile and seq tables
• 00:1000:10, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Check multizway#wayFrames table
• 00:1000:10, 25 February 2011 diff hist −2,820‎ Conservation Track QA ‎ →‎Preparing to QA
• 00:0800:08, 25 February 2011 diff hist +2,586‎ Conservation Track QA ‎ →‎Preparing to QA
• 00:0300:03, 25 February 2011 diff hist +20‎ Conservation Track QA ‎ →‎Make a list of all organisms for which there are nets & chains:
• 00:0200:02, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Make sure that pushQ entry has all gbdb files and downloads needed for the track
• 00:0200:02, 25 February 2011 diff hist −221‎ Conservation Track QA ‎ →‎Make a list of all organisms in the Conservation track:
• 00:0000:00, 25 February 2011 diff hist +4‎ Conservation Track QA ‎ →‎Pre-QA prep

24 February 2011

• 23:1423:14, 24 February 2011 diff hist +161‎ Conservation Track QA ‎ →‎QAing Conservation and Most Conserved tracks for a new assembly

23 February 2011

• 19:5919:59, 23 February 2011 diff hist +94‎ Releasing an assembly ‎ →‎Pre-staging of assembly on hgwbeta: adding bit to claim main pushQ entry

22 February 2011

• 22:5722:57, 22 February 2011 diff hist −5‎ Releasing an assembly ‎ →‎Push the database and tables from hgwdev to hgwbeta
• 19:3019:30, 22 February 2011 diff hist −80‎ Releasing an assembly ‎ →‎Announce the Release on genome-announce@soe.ucsc.edu and genecats@soe.ucsc.edu
• 19:2919:29, 22 February 2011 diff hist −7‎ Releasing an assembly ‎ →‎Verify downloads
• 19:2819:28, 22 February 2011 diff hist 0‎ Releasing an assembly ‎ →‎Stage assembly on Round Robin
• 19:2819:28, 22 February 2011 diff hist −124‎ Releasing an assembly ‎ →‎Ensure the active column in hgcentral.dbDb is set to 0
• 19:2619:26, 22 February 2011 diff hist −116‎ Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up

14 February 2011

• 22:5322:53, 14 February 2011 diff hist −526‎ Releasing an assembly ‎ →‎Chain/Nets/LiftOvers from other organisms
• 22:3822:38, 14 February 2011 diff hist +223‎ Releasing an assembly ‎ →‎blatServers, genomeClade, gdbPdb (NOT liftOver)
• 22:3422:34, 14 February 2011 diff hist +166‎ Releasing an assembly ‎ →‎Review all tracks in the sub-pushQ

8 February 2011

• 02:0102:01, 8 February 2011 diff hist +40‎ Releasing an assembly ‎ →‎If the new assembly is an update to the human, mouse, rat, zebrafish, D. melanogaster, C. elegans, or S. cerevisiae genomes, make sure that the appropriate blastTab tables to this assembly are built
• 02:0002:00, 8 February 2011 diff hist +50‎ Releasing an assembly ‎ →‎Check the release log
• 02:0002:00, 8 February 2011 diff hist +78‎ Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up
• 01:5901:59, 8 February 2011 diff hist −164‎ Releasing an assembly ‎ →‎Next day follow-up
• 01:5401:54, 8 February 2011 diff hist +265‎ Releasing an assembly ‎ →‎You may need to update all.joiner for the RR
• 01:5201:52, 8 February 2011 diff hist +60‎ Releasing an assembly ‎ →‎Update hgcentral.sql for mirrors
• 01:5001:50, 8 February 2011 diff hist −109‎ Releasing an assembly ‎ →‎Announce the Release on genome@soe.ucsc.edu and genecats@soe.ucsc.edu
• 01:4901:49, 8 February 2011 diff hist +100‎ Releasing an assembly ‎ →‎Push Static Content from hgwdev to hgwbeta and Round Robin
• 01:4701:47, 8 February 2011 diff hist −95‎ Releasing an assembly ‎ →‎Push Static Content from hgwdev to hgwbeta and Round Robin
• 01:4601:46, 8 February 2011 diff hist +116‎ Releasing an assembly ‎ →‎Figure out if either you or Donna is going to edit the static docs
• 01:4401:44, 8 February 2011 diff hist +44‎ Releasing an assembly ‎ →‎Turn on genome-mysql
• 01:4001:40, 8 February 2011 diff hist −57‎ Releasing an assembly ‎ →‎Confirm that downloads and currentGenome are functional
• 01:4001:40, 8 February 2011 diff hist +60‎ Releasing an assembly ‎ →‎Update/Add symlink in /usr/local/apache/htdocs-hgdownload/goldenPath/currentGenomes
• 01:3901:39, 8 February 2011 diff hist +55‎ Releasing an assembly ‎ →‎Push Downloads from hgwdev to hgdownload
• 01:3801:38, 8 February 2011 diff hist +1‎ Releasing an assembly ‎ →‎Update/Add symlink in /usr/local/apache/htdocs-hgdownload/goldenPath/currentGenomes
• 01:3601:36, 8 February 2011 diff hist +41‎ Releasing an assembly ‎ →‎Remove assembly from mirror "exclude" list
• 01:3501:35, 8 February 2011 diff hist +65‎ Releasing an assembly ‎ →‎Verify again that everything is working as expected on the RR
• 01:3501:35, 8 February 2011 diff hist −82‎ Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up
• 01:3401:34, 8 February 2011 diff hist +61‎ Releasing an assembly ‎ →‎Chain/Nets to other organisms
• 01:3101:31, 8 February 2011 diff hist +72‎ Releasing an assembly ‎ →‎Set active=1 in hgcentral
• 01:3001:30, 8 February 2011 diff hist −17‎ Releasing an assembly ‎ →‎Test the assembly tracks, BLAT and PCR on the RR
• 01:2401:24, 8 February 2011 diff hist −44‎ Releasing an assembly ‎ →‎Request dump and autodump of database
• 01:2201:22, 8 February 2011 diff hist −37‎ Releasing an assembly ‎ →‎Turn on genbank updates on the RR
• 01:2201:22, 8 February 2011 diff hist +147‎ Releasing an assembly ‎ →‎Turn on genbank updates on the RR
• 01:2001:20, 8 February 2011 diff hist −7‎ Releasing an assembly ‎ →‎Update hgcentral
• 01:1901:19, 8 February 2011 diff hist +201‎ Releasing an assembly ‎ →‎Update hgcentral
• 01:1501:15, 8 February 2011 diff hist −1‎ Releasing an assembly ‎ →‎rsync /gbdb again as necessary
• 01:1401:14, 8 February 2011 diff hist −1‎ Releasing an assembly ‎ →‎Request rsync of entire database from push-request
• 01:1401:14, 8 February 2011 diff hist +100‎ Releasing an assembly ‎ →‎Request rsync of entire database from push-request
• 01:1101:11, 8 February 2011 diff hist −2‎ Releasing an assembly ‎ →‎Adjust the release log in main pushQ
• 01:1101:11, 8 February 2011 diff hist +7‎ Releasing an assembly ‎ →‎Email warning genome-mirror at least 24 hours before release
• 01:1001:10, 8 February 2011 diff hist +9‎ Releasing an assembly ‎ →‎Make sure no tables need to be repushed from hgwdev to hgwbeta
• 01:0901:09, 8 February 2011 diff hist +135‎ Releasing an assembly ‎ →‎Stage assembly on Round Robin
• 01:0401:04, 8 February 2011 diff hist +140‎ Releasing an assembly ‎ →‎Verify that liftOvers are in liftOvers directories and not in vs* Directories
• 01:0101:01, 8 February 2011 diff hist −13‎ Releasing an assembly ‎ →‎Verify downloads
• 00:5800:58, 8 February 2011 diff hist +42‎ Releasing an assembly ‎ →‎Check Blat and PCR
• 00:5500:55, 8 February 2011 diff hist +1‎ Releasing an assembly ‎ →‎Check that all of the MySQL tables are in good repair
• 00:5400:54, 8 February 2011 diff hist +2‎ Releasing an assembly ‎ →‎Check to make sure that none of the table names have underscores(_)
• 00:5400:54, 8 February 2011 diff hist −7‎ Releasing an assembly ‎ →‎Run featureBits to verify that the gold and gap tables together cover the entire genome
• 00:5300:53, 8 February 2011 diff hist −1‎ Releasing an assembly ‎ →‎Check indices
• 00:5200:52, 8 February 2011 diff hist +31‎ Releasing an assembly ‎ →‎Check indices
• 00:5000:50, 8 February 2011 diff hist +1‎ Releasing an assembly ‎ →‎Check that all tables in this database are mentioned in all.joiner
• 00:5000:50, 8 February 2011 diff hist +4‎ Releasing an assembly ‎ →‎joinerCheck
• 00:2600:26, 8 February 2011 diff hist −3‎ Releasing an assembly ‎ →‎Turn on GenBank updates
• 00:2000:20, 8 February 2011 diff hist +1‎ m Releasing an assembly ‎ →‎Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
• 00:2000:20, 8 February 2011 diff hist +103‎ Releasing an assembly ‎ →‎Review phylogenetic location in pull-down menus on hgGateway
• 00:1800:18, 8 February 2011 diff hist −6‎ m Releasing an assembly ‎ →‎Test on hgwbeta: re-ordering list
• 00:1600:16, 8 February 2011 diff hist +6‎ Releasing an assembly ‎ →‎Check the .2bit files
• 00:1300:13, 8 February 2011 diff hist −1‎ m Releasing an assembly ‎ →‎Push /gbdb/$db and html/description.html=
• 00:1300:13, 8 February 2011 diff hist −25‎ Releasing an assembly ‎ →‎Push files
• 00:0900:09, 8 February 2011 diff hist −4‎ Releasing an assembly ‎ →‎=genomeClade and gdbPdb
• 00:0800:08, 8 February 2011 diff hist −2‎ Releasing an assembly ‎ →‎genomeClade and gdbPdb

7 February 2011

• 23:5823:58, 7 February 2011 diff hist −3‎ Releasing an assembly ‎ →‎blatServers
• 23:4923:49, 7 February 2011 diff hist +28‎ Releasing an assembly ‎ →‎blatServers
• 23:4923:49, 7 February 2011 diff hist +20‎ Releasing an assembly ‎ →‎blatServers
• 23:4823:48, 7 February 2011 diff hist −194‎ Releasing an assembly ‎ →‎blatServers
• 23:4423:44, 7 February 2011 diff hist +2‎ Releasing an assembly ‎ →‎dbDb
• 23:4223:42, 7 February 2011 diff hist +29‎ Releasing an assembly ‎ →‎Push chain/net tables in other organisms
• 23:4123:41, 7 February 2011 diff hist −9‎ Releasing an assembly ‎ →‎Create database on hgwbeta and push tables for $db
• 23:3923:39, 7 February 2011 diff hist −27‎ Releasing an assembly ‎ →‎Create database on hgwbeta and push tables for $db
• 23:3823:38, 7 February 2011 diff hist +5‎ Releasing an assembly ‎ →‎Check if chromosome sizes have changed significantly
• 23:3423:34, 7 February 2011 diff hist −9‎ Releasing an assembly ‎ →‎Send email to markd and Jeltje van Baren: jeltje at cse.wustl.edu so that they can being doing their N-Scan predictions
• 23:3223:32, 7 February 2011 diff hist −3‎ Releasing an assembly ‎ →‎Check that there the chain/nets and liftOvers listed in the pushQ are to valid assemblies on the RR

2 February 2011

• 19:2219:22, 2 February 2011 diff hist +1‎ m Replacing old tables with new ones ‎ →‎Example: adding a -N to the mysql command so that you don't get the table title in the file

20 January 2011

• 22:0022:00, 20 January 2011 diff hist +228‎ m Working with branches in Git ‎ →‎How do I make a branch?: adding clarification as to why you should preface your branch name with your user name
• 21:5821:58, 20 January 2011 diff hist −16‎ m Working with branches in Git ‎ →‎How do I make a branch?: removing confusing comment about "noted above"

19 January 2011

• 23:4623:46, 19 January 2011 diff hist −8‎ m Releasing an assembly ‎ →‎Next day follow-up
• 23:4523:45, 19 January 2011 diff hist −4‎ m Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up: formatting
• 23:4423:44, 19 January 2011 diff hist −3‎ m Releasing an assembly ‎ →‎Stage assembly on Round Robin: formatting
• 23:4423:44, 19 January 2011 diff hist −8‎ m Releasing an assembly ‎ →‎Verify the downloads: formatting
• 23:3523:35, 19 January 2011 diff hist −1‎ m Releasing an assembly ‎ →‎Check that all of the MySQL tables are in good repair: formatting
• 23:3423:34, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Make sure that there is a liftOver file from the previous assembly to this assembly: formatting
• 23:3423:34, 19 January 2011 diff hist −9‎ m Releasing an assembly ‎ →‎Check to make sure that none of the table names have underscores(_): formatting
• 23:3423:34, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Check indices: formatting
• 23:3323:33, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Check that all tables in this database are mentioned in all.joiner=: formatting
• 23:3323:33, 19 January 2011 diff hist 0‎ m Releasing an assembly ‎ →‎Check that common keys between tables are in sync: formatting
• 23:3223:32, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Review phylogenetic location in pull-down menus on hgGateway: formatting
• 23:3123:31, 19 January 2011 diff hist −2‎ Releasing an assembly ‎ →‎Check that all 3 copies of the .2bit file (gbdb, downloads, blat servers) are identical
• 23:3123:31, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Turn on GenBank updates: formatting
• 23:3023:30, 19 January 2011 diff hist −1‎ m Releasing an assembly ‎ →‎Make trackDb on hgwbeta: formatting
• 23:3023:30, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Push image file to hgwbeta and rr: formatting
• 23:2223:22, 19 January 2011 diff hist −1‎ m Releasing an assembly ‎ →‎liftOverChain: formatting
• 23:2123:21, 19 January 2011 diff hist −61‎ m Releasing an assembly ‎ →‎blatServers: formatting
• 23:2023:20, 19 January 2011 diff hist −1‎ m Releasing an assembly ‎ →‎dbDb: formatting
• 23:1923:19, 19 January 2011 diff hist −1‎ m Releasing an assembly ‎ →‎Push chain/net tables in other organisms: formatting
• 23:1923:19, 19 January 2011 diff hist −9‎ m Releasing an assembly ‎ →‎Create database on hgwbeta and push tables for $db: formatting
• 23:1723:17, 19 January 2011 diff hist −2‎ m Releasing an assembly ‎ →‎Check if chromosome sizes have changed significantly: formatting
• 23:1123:11, 19 January 2011 diff hist +25,917‎ N Releasing an assembly ‎ New page: ==Pre-staging of assembly on hgwbeta== ===Check if chromosome sizes have changed significantly=== * If you are releasing an update assembly, check to see if chromosome sizes have changed ...

14 January 2011

• 23:4423:44, 14 January 2011 diff hist +25‎ BlastTabs ‎ adding browserQA category link
• 00:5400:54, 14 January 2011 diff hist +2‎ m CGI Build Process ‎ changed reference to two-week schedule to be three-week schedule
• 00:0900:09, 14 January 2011 diff hist +96‎ Working with Git ‎ →‎'git log [path/fileName]': adding a bit of clarification to Galt's edit

13 January 2011

• 19:4419:44, 13 January 2011 diff hist +33‎ m CGI Testing ‎ →‎hgGene

12 January 2011

• 01:2601:26, 12 January 2011 diff hist +9‎ Working with branches in Git ‎ →‎How do I share my branch with others for team development?
• 01:2501:25, 12 January 2011 diff hist +86‎ Working with branches in Git ‎ →‎Three types of projects you might to do in a development branch
• 01:2401:24, 12 January 2011 diff hist +1‎ Working with branches in Git ‎ →‎Why use branches
• 01:2401:24, 12 January 2011 diff hist −1,017‎ Working with branches in Git ‎ →‎Introduction
• 01:2301:23, 12 January 2011 diff hist +580‎ Working with branches in Git ‎ →‎How we use branches in our group
• 01:1701:17, 12 January 2011 diff hist +346‎ Working with branches in Git ‎ →‎The nitty gritty
• 01:1601:16, 12 January 2011 diff hist +4‎ Working with branches in Git ‎ →‎How do I ...
• 01:0801:08, 12 January 2011 diff hist −21‎ Working with branches in Git ‎ →‎How do I share my branch with others for team development?
• 01:0201:02, 12 January 2011 diff hist +170‎ Working with branches in Git ‎ →‎How do I share my branch with others for team development?
• 00:3200:32, 12 January 2011 diff hist +9‎ Working with branches in Git ‎ →‎FAQ

10 January 2011

• 18:0318:03, 10 January 2011 diff hist 0‎ Working with branches in Git ‎ →‎How do I share my branch with others for team development?
• 18:0318:03, 10 January 2011 diff hist −6‎ Working with branches in Git ‎ →‎How do I share my branch with others for team development on it?
• 18:0218:02, 10 January 2011 diff hist +35‎ Working with branches in Git ‎ →‎How do I make a branch?
• 17:5917:59, 10 January 2011 diff hist −2‎ Working with branches in Git ‎ →‎Why use branches
• 17:5717:57, 10 January 2011 diff hist +6‎ Working with branches in Git ‎ →‎Why use branches

7 January 2011

• 19:3219:32, 7 January 2011 diff hist −25‎ Working with branches in Git ‎ →‎What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
• 19:3219:32, 7 January 2011 diff hist −11‎ Working with branches in Git ‎ →‎What do I do if I'm in the middle of a project on another branch and I need to do quickly make some minor change to the main branch (master)?
• 19:3119:31, 7 January 2011 diff hist +365‎ Working with branches in Git ‎ →‎How do I push my branch back to the main repository, so other people can work on my branch too?
• 19:2619:26, 7 January 2011 diff hist +130‎ Working with branches in Git ‎ →‎How do I commit only to the branch I am working on?: adding clarification
• 19:2519:25, 7 January 2011 diff hist +2‎ Working with branches in Git ‎ →‎FAQ: rearranging order of questions
• 19:2419:24, 7 January 2011 diff hist +20‎ Working with branches in Git ‎ →‎How do I push out my changes back onto the mainstream of development?
• 19:2319:23, 7 January 2011 diff hist +1‎ Working with branches in Git ‎ →‎How do I delete a branch?
• 19:2119:21, 7 January 2011 diff hist +85‎ Working with branches in Git ‎ →‎Why use branches
• 19:2019:20, 7 January 2011 diff hist −2‎ Working with branches in Git ‎ →‎Why use branches
• 19:2019:20, 7 January 2011 diff hist −42‎ Working with branches in Git ‎ →‎Why use branches
• 19:1919:19, 7 January 2011 diff hist −6‎ Working with branches in Git ‎ →‎Why use branches
• 19:0919:09, 7 January 2011 diff hist +58‎ Working with Git ‎ →‎Definitions
• 19:0919:09, 7 January 2011 diff hist −8‎ Working with branches in Git ‎ →‎How do I make a branch?
• 19:0819:08, 7 January 2011 diff hist −9‎ Working with branches in Git ‎ →‎Overview on how to use branches
• 19:0719:07, 7 January 2011 diff hist +13‎ Working with branches in Git ‎ →‎Why use branches
• 19:0519:05, 7 January 2011 diff hist +70‎ Working with branches in Git ‎ →‎What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
• 19:0419:04, 7 January 2011 diff hist +1‎ Working with branches in Git ‎ →‎How do I move between branches?
• 19:0419:04, 7 January 2011 diff hist +18‎ Working with branches in Git ‎ →‎How do I move between branches?
• 19:0219:02, 7 January 2011 diff hist +31‎ Working with branches in Git ‎ →‎How do I move between branches?
• 19:0019:00, 7 January 2011 diff hist +255‎ Working with branches in Git ‎ →‎What do I do if I'm in the middle of a project on another branch and I need to do quickly make some minor change to the main branch (master)?
• 18:5818:58, 7 January 2011 diff hist +23‎ Working with branches in Git ‎ →‎How do I keep my branch up to date?
• 18:5718:57, 7 January 2011 diff hist +48‎ Working with branches in Git ‎ →‎How do I keep my branch up to date?
• 18:5618:56, 7 January 2011 diff hist +56‎ Working with branches in Git ‎ →‎How do I delete a branch?
• 00:3100:31, 7 January 2011 diff hist −9‎ Working with branches in Git ‎ →‎What do I do if I'm only part way through a project and need to stop? How do I make sure that I keep my work I have already done without making a commit that I don't want other's to see?
• 00:3000:30, 7 January 2011 diff hist +4‎ Working with branches in Git ‎ →‎How do I delete a branch?
• 00:2900:29, 7 January 2011 diff hist +2‎ Working with branches in Git ‎ →‎How do I know which branch am I on?
• 00:2900:29, 7 January 2011 diff hist +3‎ Working with branches in Git ‎ →‎How do I move between branches?
• 00:2900:29, 7 January 2011 diff hist +1‎ Working with branches in Git ‎ →‎How do I make a branch?
• 00:2800:28, 7 January 2011 diff hist +1‎ Working with branches in Git ‎ →‎How do I delete a branch?
• 00:2800:28, 7 January 2011 diff hist −1‎ m Working with branches in Git ‎ →‎Introduction: moving important information to a more prominent location

6 January 2011

• 23:5723:57, 6 January 2011 diff hist +5,983‎ N Working with branches in Git ‎ page creation

4 January 2011

• 02:2102:21, 4 January 2011 diff hist +2‎ m BlastTabs ‎ →‎How to QA blastTabs
• 02:2002:20, 4 January 2011 diff hist 0‎ BlastTabs ‎ →‎Very general overview on how blastTabs are made:: correct mis-information
• 02:1902:19, 4 January 2011 diff hist −1‎ m BlastTabs ‎ →‎What are the blastTabs tables: spelling
• 02:1802:18, 4 January 2011 diff hist +10‎ m BlastTabs ‎ →‎When to update blastTabs: making title more descriptive
• 02:1802:18, 4 January 2011 diff hist +11‎ m BlastTabs ‎ →‎What are blastTabs: making title more descriptive
• 02:1402:14, 4 January 2011 diff hist −6‎ BlastTabs ‎ →‎How to QA blastTabs: Unbolding last sentence so looks nicer
• 02:1302:13, 4 January 2011 diff hist −3‎ BlastTabs ‎ →‎When to update blastTabs: grammar edit
• 02:1102:11, 4 January 2011 diff hist +54‎ QAing UCSC Genes ‎ Adding link to new blastTabs page
• 02:0902:09, 4 January 2011 diff hist −23‎ Ensembl QA ‎ removing browserQA category link. Also, last commit was adding link to new blastTab page
• 02:0802:08, 4 January 2011 diff hist +4‎ Ensembl QA ‎No edit summary
• 02:0702:07, 4 January 2011 diff hist +8,566‎ N BlastTabs ‎ page creation. Added in some of Brooke's comments already

29 December 2010

• 20:0420:04, 29 December 2010 diff hist −15‎ New Assembly Release Process Details ‎ →‎Stage and test on hgwbeta: correcting file path for making etc-update-rr for genbank updates
• 20:0220:02, 29 December 2010 diff hist +130‎ New Assembly Release Process Details ‎ →‎Push Data to Round Robin from hgwbeta: adding better documentation about how to get genbank tables

16 December 2010

• 00:1700:17, 16 December 2010 diff hist +155‎ Ensembl QA ‎ adding bit about watchin for blast tabs

9 December 2010

• 19:5319:53, 9 December 2010 diff hist −2‎ m CGI Testing ‎ →‎hgVisiGene: editing formating so looks better

3 December 2010

• 18:3418:34, 3 December 2010 diff hist +929‎ CGI Testing ‎ →‎hgTrackUi: finishing out edits