User contributions for Marygoldman
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11 August 2010
- 17:2217:22, 11 August 2010 diff hist −46 Working with Git →Fixing un-wanted changes
- 17:2217:22, 11 August 2010 diff hist +17 Working with Git →Fixing un-wanted changes
- 17:1617:16, 11 August 2010 diff hist −2 Working with Git →'git commit -m "some message" fileName(s)'
- 17:1417:14, 11 August 2010 diff hist +23 Working with Git →Terms that can refer to multiple things
- 17:1317:13, 11 August 2010 diff hist −35 Working with Git →'git push'
- 17:1117:11, 11 August 2010 diff hist +9 Working with Git →Other good things to know
- 16:5216:52, 11 August 2010 diff hist +6 Working with Git →Other good things to know
- 16:4816:48, 11 August 2010 diff hist −2 Working with Git →'git log [path/fileName]': typo
- 16:4816:48, 11 August 2010 diff hist +21 Working with Git →Other good things to know
- 16:4616:46, 11 August 2010 diff hist +45 Working with Git →'git log [path/fileName]'
- 16:4116:41, 11 August 2010 diff hist +25 Working with Git →Fixing un-wanted changes
- 16:4016:40, 11 August 2010 diff hist +31 m Working with Git formatting: making the command names smaller
- 16:3716:37, 11 August 2010 diff hist +335 Working with Git moving warning message
- 16:2516:25, 11 August 2010 diff hist −9 Working with Git →'git pull'
- 16:2116:21, 11 August 2010 diff hist 0 m Working with Git moving git blame into better parent category
- 16:1716:17, 11 August 2010 diff hist −23 Working with Git →'git pull'
- 16:1616:16, 11 August 2010 diff hist +93 Working with Git →'git rm fileName'
- 16:1516:15, 11 August 2010 diff hist −101 Working with Git →'git add fileName'
- 01:0701:07, 11 August 2010 diff hist −96 Working with Git little edits plus making the commit-ID-interchangeable-with-HEAD thing at the end
10 August 2010
- 22:2222:22, 10 August 2010 diff hist +243 m Working with Git editing git fetch, merge and stash
- 22:1322:13, 10 August 2010 diff hist +2 Working with Git →Useful resources
- 22:1222:12, 10 August 2010 diff hist +182 m Working with Git adding useful resources
- 22:0722:07, 10 August 2010 diff hist −190 m Working with Git No edit summary
- 22:0422:04, 10 August 2010 diff hist +9,388 N Working with Git New page: ==Git structure== ===Definitions=== central repository – The main repository we all share. This is where we push files for everyone to use. Contains a history of everyone’s commits t...
- 17:4217:42, 10 August 2010 diff hist +1 m Providing remote audio for a meeting missing parenthesis
29 July 2010
- 20:5120:51, 29 July 2010 diff hist +3 Replacing old tables with new ones accidentially reference hgwdev rather than hgwbeta
- 00:0300:03, 29 July 2010 diff hist +2,025 N Providing remote audio for a meeting adding page
28 July 2010
- 16:5916:59, 28 July 2010 diff hist +61 m New Assembly Release Process Details added step about running doGenbankTests
26 July 2010
- 17:5717:57, 26 July 2010 diff hist +170 New Assembly Release Process Details adding updating hgcentral.sql from checklist page to here
- 17:3917:39, 26 July 2010 diff hist +95 Ensembl QA added line about doing regular QA in addition to what is on this page
- 17:3217:32, 26 July 2010 diff hist −194 Ensembl QA removed reference to script that isn't useful. Tidied up language.
22 July 2010
- 21:1121:11, 22 July 2010 diff hist +237 CBSE citation format adding information about how to cite a paper within text and to make citations alphabetical
21 July 2010
- 23:2123:21, 21 July 2010 diff hist +152 Ensembl QA Adding point about looking at hgFixed, as well as numbering
- 23:1723:17, 21 July 2010 diff hist +55 m Ensembl QA adding categories
- 23:1723:17, 21 July 2010 diff hist +353 N Ensembl QA page creation
- 21:1121:11, 21 July 2010 diff hist +23 New track checklist little edits
16 July 2010
- 22:4922:49, 16 July 2010 diff hist +30 m UCSC Genes Staging Process adding Category:Browser QA tracks
- 22:4822:48, 16 July 2010 diff hist +30 m SNP Track QA adding Category:Browser QA tracks
- 22:4822:48, 16 July 2010 diff hist +30 m QAing UCSC Genes adding Category:Browser QA tracks
- 22:4722:47, 16 July 2010 diff hist +30 m New track checklist adding Category:Browser QA tracks
- 22:4622:46, 16 July 2010 diff hist +30 m Conservation Track QA adding Category:Browser QA tracks
- 22:4622:46, 16 July 2010 diff hist +87 N Category:Browser QA tracks New page: This category contains pages that give directions on how to QA a specific type of track current
- 22:4522:45, 16 July 2010 diff hist +30 m Chains and Nets QA adding Category:Browser QA tracks
- 22:3022:30, 16 July 2010 diff hist +292 New track checklist adding link to good page as well as Checking Length Labels
- 22:2722:27, 16 July 2010 diff hist +25 m Replacing old tables with new ones adding category: browser QA
14 July 2010
- 18:2318:23, 14 July 2010 diff hist +19 m SNP Track QA another edit to make it more clear
- 17:4117:41, 14 July 2010 diff hist +65 m SNP Track QA adding bit about runBits.csh
- 17:4017:40, 14 July 2010 diff hist +32 m SNP Track QA rewording a step so more clear
13 July 2010
- 23:1223:12, 13 July 2010 diff hist +24 m SNP Track QA making bullets look nicer
- 23:0923:09, 13 July 2010 diff hist +2,965 N SNP Track QA starting wiki page about QAing SNPs
30 June 2010
- 18:4018:40, 30 June 2010 diff hist +218 m CBSE citation format adding example for book chapter
- 17:0617:06, 30 June 2010 diff hist +297 Conservation Track QA added clarification for how to reach hgPal
25 June 2010
- 22:2722:27, 25 June 2010 diff hist +112 m Conservation Track QA adding clarification for the "Make sure that this page includes all the extra sections (if the multizs have been annotated)." section
23 June 2010
- 23:0823:08, 23 June 2010 diff hist +123 Presentations adding the audio from Ed Green's talk
- 23:0723:07, 23 June 2010 diff hist +658 N File:Genecats062310.mp3 At this week's genecats meeting, Ed Green will be giving the talk "Detecting positive selection in humans using the Neandertal genome". Description: We recently completed one-fold coverage of the Neandertal genome. Despite their 300,000 year old populati current
18 June 2010
- 23:1623:16, 18 June 2010 diff hist +25 m Internet browser testing adding category: browser QA
- 23:1523:15, 18 June 2010 diff hist +1,089 N Internet browser testing adding page to wiki
17 June 2010
- 21:3421:34, 17 June 2010 diff hist +182 Presentations adding audio for Steve Benz's advancement as well as slides and audio for larry's web 2.0 genecats
- 21:2821:28, 17 June 2010 diff hist 0 N File:Genecats061610.pdf No edit summary current
- 21:2521:25, 17 June 2010 diff hist 0 N File:Genecats061610.mp3 No edit summary current
- 21:2421:24, 17 June 2010 diff hist 0 N File:BenzAdvancement061510.mp3 No edit summary current
16 June 2010
- 00:1700:17, 16 June 2010 diff hist +49 m New Assembly Release Process Details made link and fixed typo
14 June 2010
- 21:5721:57, 14 June 2010 diff hist −1 m Conservation Track QA →To see the list of assemblies actually used to build the tracks:: changing path so correct
- 20:1720:17, 14 June 2010 diff hist +3 m Git: CVS equivalent operations fixing spacing for checking out a tree
10 June 2010
- 00:1700:17, 10 June 2010 diff hist +44 m Presentations adding link to partial audio for genecats 06.09.10
- 00:1500:15, 10 June 2010 diff hist +90 N File:Genecats060910.mp3 Last 45 min from Genecats on June 9th, 2010: Transition to Git. Galt Barber is presenting. current
3 June 2010
- 20:3720:37, 3 June 2010 diff hist +11 m Chains and Nets QA forgot to add hgdownload to one of the htdocs
21 May 2010
- 22:1922:19, 21 May 2010 diff hist −2 m Static content for new assemblies wrong preposition
- 22:1822:18, 21 May 2010 diff hist +88 Static content for new assemblies changing file path for downloads on hgwdev to be htdocs-hgdownload
- 22:1622:16, 21 May 2010 diff hist +97 New Release Checklist changing file path for downloads on hgwdev to be htdocs-hgdownload
- 22:1422:14, 21 May 2010 diff hist +11 m New Assembly Release Process Details forgot downloads.html was also put into htdocs-hgdownload
- 21:5621:56, 21 May 2010 diff hist −21 New Release Checklist changing link to 2bit reference in details page
- 21:5521:55, 21 May 2010 diff hist −75 New Assembly Release Process Details making it look nicer, taking out cruft. also adding tag for 2bit so can link to it from checklist
- 21:5021:50, 21 May 2010 diff hist +413 New Assembly Release Process Details changing file path for downloads on hgwdev to be htdocs-hgdownload
- 21:3821:38, 21 May 2010 diff hist +11 m New Release Checklist forgot to put in "goldenPath" in a path
- 21:3621:36, 21 May 2010 diff hist +526 New Assembly Release Process Details adding step to check blat servers and .2bit files
- 21:2821:28, 21 May 2010 diff hist +242 New Release Checklist adding step to check blat servers and .2bit files
12 May 2010
- 17:5317:53, 12 May 2010 diff hist +81 m New Release Checklist editing contacting Branwyn since no longer announcement page on cbse
3 May 2010
- 18:4518:45, 3 May 2010 diff hist +123 m New Assembly Release Process Details edited gbdb push so that don't push unnecessary files
- 18:4218:42, 3 May 2010 diff hist +317 m New Assembly Release Process Details adding things to look out for when doing hgcentral.liftOverChain
- 18:2818:28, 3 May 2010 diff hist +3 m Chains and Nets QA adding a -e to the hgsql statement
29 April 2010
- 20:4320:43, 29 April 2010 diff hist +161 m Chains and Nets QA added information about how to load data into mysql from a file
27 April 2010
- 17:2917:29, 27 April 2010 diff hist −1,039 New Assembly Release Process Details added page about static content and linked to it from here.
- 17:2717:27, 27 April 2010 diff hist +3,459 N Static content for new assemblies creating page
22 April 2010
- 18:2618:26, 22 April 2010 diff hist +1,863 N Updating blat servers created page on how to edit the blat server lines in hgcentral
21 April 2010
- 17:2617:26, 21 April 2010 diff hist −1 m New Release Checklist adding mark as contact for N-Scan predicitions track
12 April 2010
- 21:5021:50, 12 April 2010 diff hist +22 m New Assembly Release Process Details adding clarification for checking .2bit files
- 21:4621:46, 12 April 2010 diff hist −20 m New Assembly Release Process Details fixed it so some html tags don't show
- 21:3521:35, 12 April 2010 diff hist +481 New Assembly Release Process Details Added step of checking chrom sizes before staging on beta
31 March 2010
- 21:1421:14, 31 March 2010 diff hist +1 m Replacing old tables with new ones typo
- 21:1421:14, 31 March 2010 diff hist −6 m Replacing old tables with new ones changing so reflects changes to tri-state trackDb and editing so email says "table" rather than "db.table"
- 21:1221:12, 31 March 2010 diff hist +106 m Chains and Nets QA changing so reflects changes to tri-state trackDb
- 16:1616:16, 31 March 2010 diff hist −72 m Browser Installation changed reference to mysql 5 instead of mysql 4
25 March 2010
- 22:3622:36, 25 March 2010 diff hist 0 m Minimal Browser Installation making genome.ucsc.edu link work and taking comma out of link to Mirror Instructions
9 March 2010
- 22:0622:06, 9 March 2010 diff hist −31 Replacing old tables with new ones No edit summary
- 01:0301:03, 9 March 2010 diff hist −941 Chains and Nets QA Took out part of page relevant to all new tracks and created another page
- 01:0201:02, 9 March 2010 diff hist +2,343 N Replacing old tables with new ones creating page
8 March 2010
- 23:4623:46, 8 March 2010 diff hist −1 m Chains and Nets QA fixing some typos
5 March 2010
- 01:3101:31, 5 March 2010 diff hist +8 m Chains and Nets QA →After QAing on hgwbeta: Pushing to the RR: : little typo
- 01:2301:23, 5 March 2010 diff hist +2,179 Chains and Nets QA Same information, just restructured it to make sense. Also pulled some information from referenced webpages.