User:Gayle McEwen

Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques. Duitama J, McEwen GK, Huebsch T, Palczewski S, Schulz S, Verstrepen K, Suk EK, Hoehe MR. Nucleic Acids Res. 2012 Mar;40(5):2041-53.

A comprehensively molecular haplotype-resolved genome of a European individual. Suk EK, McEwen GK, Duitama J, Nowick K, Schulz S, Palczewski S, Schreiber S, Holloway DT, McLaughlin S, Peckham H, Lee C, Huebsch T, Hoehe MR. Genome Res. 2011 Oct;21(10):1672-85.

Functional analysis of conserved non-coding regions around the short stature hox gene (shox) in whole zebrafish embryos. Kenyon EJ, McEwen GK, Callaway H, Elgar G. PLoS One. 2011;6(6):e21498.

Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler. Zerbino DR, McEwen GK, Margulies EH, Birney E. PLoS One. 2009 Dec 22;4(12):e8407.

Early evolution of conserved regulatory sequences associated with development in vertebrates. McEwen GK, Goode DK, Parker HJ, Woolfe A, Callaway H, Elgar G. PLoS Genet. 2009 Dec;5(12):e1000762.

CONDOR: a database resource of developmentally associated conserved non-coding elements. Woolfe A, Goode DK, Cooke J, Callaway H, Smith S, Snell P, McEwen GK, Elgar G. BMC Dev Biol. 2007 Aug 30;7:100.

Ancient duplicated conserved noncoding elements in vertebrates: a genomic and functional analysis. McEwen GK, Woolfe A, Goode D, Vavouri T, Callaway H, Elgar G. Genome Res. 2006 Apr;16(4):451-65.

Defining a genomic radius for long-range enhancer action: duplicated conserved non-coding elements hold the key. Vavouri T, McEwen GK, Woolfe A, Gilks WR, Elgar G. Trends Genet. 2006 Jan;22(1):5-10.

Highly conserved non-coding sequences are associated with vertebrate development. Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, Vavouri T, Smith SF, North P, Callaway H, Kelly K, Walter K, Abnizova I, Gilks W, Edwards YJ, Cooke JE, Elgar G. PLoS Biol. 2005 Jan;3(1):e7.