User:Hiram: Difference between revisions

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Mailstop: CBSE/ITI, 1156 High Street, Santa Cruz, CA 95064
Mailstop: CBSE/ITI, 1156 High Street, Santa Cruz, CA 95064


'''Areas of Responsibility'''
<h4>Areas of Responsibility</h4>


* Building new browser assemblies
* Building new browser assemblies

Revision as of 16:53, 12 April 2006

Office phone: 831-459-5871
Office: room 515 Engineering II U.C. Santa Cruz

Mailstop: CBSE/ITI, 1156 High Street, Santa Cruz, CA 95064

Areas of Responsibility

  • Building new browser assemblies
  • "wiggle" data encoding tracks
  • Correlation functions on the Table browser
  • Source tree organization and porting issues
  • Wiki installation and evaluation
  • Cluster job organization and management
  • "randomPlacement" program for genome location randomization experiments
  • Web Statistics
  • Unix expertise
  • Date/Time functions
  • Astrophotography
  • Solar Eclipse experience

To Do List

  • fixup loading of bacEndPairs to avoid the chrom+chromEnd index, see Bob's email of 16:58 2006-04-06
  • Webb & David's randomization work
  • David mentioned liftOver for mm8 -> mm7
  • Attempting to finish off monDom4 (needs Hg18 mapped proteins)
  • microRNA targets tracks (Nikolaus, hg17, dm2, ce2 - waiting on confirmation)
  • mm8 panTro2 alignments (finishing up alignments 29 March)
  • rework multiz when mm8/panTro2 done
  • panTro2 monDom4 alignments (panTro2 being rebuilt)
  • monDom4 human proteins mapping (have Hg18 proteins, now simpleChaining)
  • monDom4 self chain/net (chaining on kolossus, takes too long)
  • wiki administration (on-going situation)
  • Tasks Completed

links to remember

Restricted Rights
Restrict Patch
Hidden Pages
Custom Namespaces
Collaborative Software
Change Navigation Links
Image link syntax
Wikipedia Criticism
Adding Captcha