Encode scenarios: Difference between revisions
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(New page for scenarios using encode data. includes template for further additions) |
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Revision as of 05:44, 11 March 2010
Tier 1 Cell Lines
Basic ENCODE data on the Tier 1 cell lines GM128, a lymphoid cell line and K562, a myeloid line. The tracks include RNA-seq which shows the level of expression of the gene EWSR1, the histone mark, H3K4Me, which is associated with promoters; DNAseI hypersensitivity, which is associated with regulatory regions in general; and ChIP-seq showing levels of occupancy by the transcription factor c-Fos.
Template
Description of scenario.
