Genome Browser Software Features: Difference between revisions

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[[Category:Browser QA]]
[[Category:Browser QA]]
== 13 March, 2009 (v202) ==
* changed PCR display to indicate the location of primers


== 27 February, 2009 (v201) ==
== 27 February, 2009 (v201) ==

Revision as of 19:24, 13 March 2009

This page contains a list of major new software features found in the UCSC Genome Browser. The most recent features are always at the top of the page.

13 March, 2009 (v202)

  • changed PCR display to indicate the location of primers

27 February, 2009 (v201)

12 February, 2009 (v200)

  • turned on drag-and-zoom feature by default
  • fixed navigation to Ensembl when their chromosome names are different than ours


30 January, 2009 (v199)

  • introduced multi-view track configuration


16 January, 2009 (v198)

  • added drag-and-zoom feature to image (hgTracks)
  • changed default image width from 620 pixels to 800 pixels
  • added expand all / collapse all buttons for groups on hgTracks
  • import marker-value pairs into Genome Graphs to get a custom marker column in the Gene Sorter
  • Table Browser sped up when large number of ID names are uploaded/pasted

19 December, 2008 (v197)

  • Turned on by default the "next/previous exon navigation"

5 December, 2008 (v196)

  • (partial list)
  • hgPcr expanded to include UCSC Genes amplification for human and mouse (jumps across introns).

18 November, 2008 (v195)

  • Session tool UI changes.
  • Session tool gives error message when a session is given an existing name.
  • Option to not color chains in the Chain track.
  • Option to filter chains in the Chain track on a particular chromosome.

31 October, 2008 (v194)

16 October, 2008 (v193)

  • Added next/previous item capability to Custom Tracks.
  • Added MAF r lines to indicate how MAF regions were defined.
  • Automatic updates to upstream FASTA and MAF files.

3 October, 2008 (v192)

  • New CGI: hgPal

22 September, 2008 (v191)

9 September, 2008 (v190)

  • Added MAF as custom track type

22 August, 2008 (v189)

  • Fixed snp128 and snp129, so Table Browser filter doesn't show misleading choices.
  • Fixed PDF/PS output to not include hidden BLAT results.

8 August, 2008 (v188)

  • Added links to other organisms' browsers and DNA from Conservation track details page.

28 July, 2008 (v187)

  • Added next-item feature to BED tracks with less than 9 columns
  • Always show the "hide all" button even if the track control display is turned off.

11 July, 2008 (v186)

  • Display the "hide all" button even if the track control display is turned off
  • Added check for custom track existence when saving a session
  • Added next-item feature to BED tracks with less than 9 columns
  • New link in xenoRefGene details page to browser for other species
  • New "D" (DNA) link on Conservation track details page for all species

27 June, 2008 (v185)

  • Position/Search box now allows a single-base search (e.g. chr3:12345)

16 June, 2008 (v184)

  • Added support for MAF-formatted custom tracks.
  • java script now can collapse control button groups without server round trips

Previous Releases

  • Genome Browser Scale Bar (in Base Position track).