PetMar2 conservation alignment

From genomewiki
Revision as of 18:52, 2 November 2012 by Hiram (talk | contribs) (initial contents)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigationJump to search

see also

do not edit

This table is automatically generated off-line from the UCSC databases. Please do not edit it.

URL to
assembly
sequence
UCSC db name/
genome-preview
browser
Scientific name/
assembly information
Common
name
assembly date source
version
Repeat
Masker
Window
Masker
chain
on petMar2
% of petMar2
matched
(chainLink table)
01petMar2Petromyzon
marinus
Lamprey Sep. 2010 (WUGSC 7.0/petMar2) GSC Washington University School of Medicine 2012-10-12 2012-10-12 N/AN/A
02galGal4Gallus
gallus
Chicken Nov. 2011 (ICGSC Gallus_gallus-4.0/galGal4) ICGSC Gallus_gallus-4.0 (GCA_000002315.2) 2012-01-04 2012-01-04 2012-10-292.869%
03oryLat2Oryzias
latipes
Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) NIG and Tokyo Univ MEDAKA1 (NCBI project 16702, BAAF04000000) 2009-08-15 2009-08-15 2012-10-244.926%
04monDom5Monodelphis
domestica
Opossum Oct. 2006 (Broad/monDom5) Broad Institute monDom5 (NCBI project 12561, accession AAFR03000000) 2009-08-14 2009-08-14 2012-10-242.618%
05hg19Homo
sapiens
Human Feb. 2009 (GRCh37/hg19) GRCh37 Genome Reference Consortium Human Reference 37 (GCA_000001405.1) 2009-08-15 2012-04-19 2012-10-173.324%
06mm10Mus
musculus
Mouse Dec. 2011 (GRCm38/mm10) Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) 2012-02-06 2012-02-07 2012-10-223.232%
07braFlo2Branchiostoma
floridae
Lancelet Apr. 2008 (JGI v2.0/braFlo2) US DOE Joint Genome Institute v2.0 2012-10-18 2012-10-18 2012-10-203.020%