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• Fetch fasta sequence for identifier list
  mysql --user=genome --host=genome-mysql.soe.ucsc.edu -A -N \ [[Category:User Developed Scripts]]
  2 KB (346 words) - 07:56, 1 September 2018
• Browser Track Construction
  The consistency of the file directory hierarchy allows automatic scripts to perform many [[Category:User Developed Scripts]]
  6 KB (966 words) - 21:01, 23 April 2013
• Window Masker
  [[Category:User Developed Scripts]]
  4 KB (534 words) - 21:04, 23 April 2013
• Genscan
  [[Category:User Developed Scripts]]
  4 KB (578 words) - 21:02, 23 April 2013
• Minimal Steps For LiftOver
  [[Category:User Developed Scripts]]
  4 KB (648 words) - 15:18, 26 April 2018
• Finding nearby genes
  one of the examples below. These scripts will find the nearest transcripts (upstream and downstream) from your reference point, and report the gene name also. The last two scripts (for hg19 & hg38) will
  18 KB (2,337 words) - 15:24, 17 July 2018
• CPG Islands
  [[Category:User Developed Scripts]]
  5 KB (680 words) - 21:02, 23 April 2013
• TRF Simple Repeats
  [[Category:User Developed Scripts]]
  6 KB (847 words) - 20:36, 2 July 2015
• BedFlanking
  [[Category:User Developed Scripts]]
  10 KB (1,152 words) - 15:14, 12 September 2006
• Hiram Tasks Done
  ===Return to: [[User:Hiram#To_Do_List|To Do List]]=== <li>apache log analysis to discern country and user profiles for annual reports(2011-03-14)</li>
  15 KB (2,552 words) - 14:50, 27 June 2011
• RepeatMasker
  [[Category:User Developed Scripts]]
  10 KB (1,434 words) - 08:09, 1 September 2018
• Tuning-primer.sh
  ...xtended. Download from mysqltuner.com, link is on the right-hand side. --[[User:Max|Max]] 18:03, 25 February 2010 (UTC)) read -p "User: " user
  45 KB (4,849 words) - 15:50, 10 March 2016

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