Whole genome alignment howto: Revision history

22 February 2019

• curprev 23:1423:14, 22 February 2019‎ Dschmelt talk contribs‎ 16,362 bytes −164‎ →‎doBlastzChainNet.pl: Removing broken link
• curprev 23:1223:12, 22 February 2019‎ Dschmelt talk contribs‎ 16,526 bytes −38‎ Changing <code> tags to <pre> tags to prevent unnecessary newlines
• curprev 23:0923:09, 22 February 2019‎ Dschmelt talk contribs‎ 16,564 bytes −10‎ →‎Example, step 1: Alignments with Blastz: Changing code tags to Pre tags to prevent unnecessary newlines

1 September 2018

• curprev 07:1007:10, 1 September 2018‎ Galt talk contribs‎ 16,574 bytes −7‎ changed cse to soe and genome-source fixes

26 April 2018

• curprev 15:2015:20, 26 April 2018‎ Hiram talk contribs‎ 16,581 bytes 0‎ →‎2018 UPDATE NOTE
• curprev 15:2015:20, 26 April 2018‎ Hiram talk contribs‎ 16,581 bytes 0‎ corrected doBlastzChainNet.pl

9 April 2018

• curprev 17:1517:15, 9 April 2018‎ Hiram talk contribs‎ 16,581 bytes +321‎ adding note to reference the doChainNetBlastz.pl script

27 February 2017

• curprev 17:5217:52, 27 February 2017‎ Cath Tyner talk contribs‎ 16,260 bytes +31‎ Highlighting an important file with the needed steps

7 October 2015

• curprev 22:2422:24, 7 October 2015‎ Matt Speir talk contribs‎ 16,229 bytes +2‎ →‎Example, step 5: Phastcons

12 August 2015

• curprev 17:5117:51, 12 August 2015‎ Jonathan Casper talk contribs‎ 16,227 bytes +130‎ →‎Example, step 1: Alignments with Blastz

1 April 2015

• curprev 20:3420:34, 1 April 2015‎ Jonathan Casper talk contribs‎ 16,097 bytes +9‎ →‎doBlastzChainNet.pl

27 March 2015

• curprev 18:3318:33, 27 March 2015‎ Brian Lee talk contribs‎ 16,088 bytes +13‎ →‎Example, step 2: Chaining: changing pipermail to google group link

10 June 2013

• curprev 17:0617:06, 10 June 2013‎ Max talk contribs‎ 16,075 bytes +44‎ →‎Before you start

13 March 2013

• curprev 17:1817:18, 13 March 2013‎ Hiram talk contribs‎ 16,031 bytes +202‎ add reference to same species lift over

21 January 2013

• curprev 20:3320:33, 21 January 2013‎ Max talk contribs‎ 15,829 bytes +78‎ →‎Example, step 1: Alignments with Blastz

2 May 2012

• curprev 21:4321:43, 2 May 2012‎ Max talk contribs‎ 15,751 bytes +282‎ →‎Before you start

19 August 2011

• curprev 00:2900:29, 19 August 2011‎ Max talk contribs‎ 15,469 bytes +164‎ No edit summary

24 February 2011

• curprev 10:5710:57, 24 February 2011‎ Max talk contribs‎ 15,305 bytes +4‎ →‎Fileformats

19 February 2011

• curprev 16:5316:53, 19 February 2011‎ Max talk contribs‎ 15,301 bytes +353‎ →‎Outline - Notes: corrected wrong statements about multiz

26 January 2011

• curprev 00:1700:17, 26 January 2011‎ Hiram talk contribs‎ 14,948 bytes +242‎ add script dependents