User contributions for Chmalee

1 December 2023

• 20:3920:39, 1 December 2023 diff hist +5‎ m CGI Build Process ‎ →‎Final Build Wrap-up: Change name of gbib/gbic push script

13 November 2023

• 21:2421:24, 13 November 2023 diff hist +75‎ CGI Build Process ‎ →‎Optionally Check TrackDb
• 21:2321:23, 13 November 2023 diff hist +22‎ CGI Build Process ‎ →‎Optionally Check TrackDb
• 20:4820:48, 13 November 2023 diff hist +39‎ CGI Build Process ‎ →‎Final Build : Day 15
• 20:4420:44, 13 November 2023 diff hist +397‎ CGI Build Process ‎ →‎Final Build : Day 15: Add steps for checking trackDb build successful

7 July 2023

• 18:4818:48, 7 July 2023 diff hist +3‎ m Demo sandbox ‎ →‎Claimed sandbox table current

25 April 2023

• 16:5116:51, 25 April 2023 diff hist +582‎ CGI Build Process ‎ →‎Update kent-core
• 16:3616:36, 25 April 2023 diff hist +39‎ CGI Build Process ‎ →‎Update kent-core
• 15:3815:38, 25 April 2023 diff hist +26‎ CGI Build Process ‎ →‎Update kent-core

13 April 2023

• 20:1820:18, 13 April 2023 diff hist −1,068‎ m CGI Build Process ‎ →‎Final Build Wrap-up: Add new script to push the gbib and gbic files

23 January 2023

• 21:2721:27, 23 January 2023 diff hist +277‎ m Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build

13 May 2022

• 22:4122:41, 13 May 2022 diff hist −2‎ Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build
• 22:3922:39, 13 May 2022 diff hist +510‎ Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build
• 22:3322:33, 13 May 2022 diff hist +6‎ Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build
• 22:3322:33, 13 May 2022 diff hist +487‎ Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build
• 22:2922:29, 13 May 2022 diff hist +59‎ Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build
• 22:2922:29, 13 May 2022 diff hist +139‎ m Cell Browser Release Process ‎ →‎Setting Up the Environment for the Build

14 February 2022

• 18:1818:18, 14 February 2022 diff hist 0‎ m CGI Build Process ‎ →‎Generate the code summaries and review pairings: Swap Ann for Clay
• 18:1718:17, 14 February 2022 diff hist +1‎ m CGI Build Process ‎ →‎Generate review pairings: Swap Ann for Clay
• 18:1718:17, 14 February 2022 diff hist +1‎ m CGI Build Process ‎ →‎Generate review pairings: Swap Ann for Clay

3 May 2021

• 20:4720:47, 3 May 2021 diff hist +3‎ CGI Build Process ‎ →‎Genome Browser in a Box

2 March 2021

• 01:2001:20, 2 March 2021 diff hist +103‎ CGI Build Process ‎ →‎Genome Browser in a Box: Note additional "notSelf" update needed that gbibCoreUpdateBeta is performed

1 March 2021

• 20:3320:33, 1 March 2021 diff hist +48‎ CGI Build Process ‎ →‎Genome Browser in a Box: Adding note to update the update script before running the cgi update
• 17:4817:48, 1 March 2021 diff hist +13‎ CGI Build Process ‎ →‎Genome Browser in a Box: Clearly separating old style script gbib update procedure from current manual steps

16 October 2020

• 17:2817:28, 16 October 2020 diff hist +2,004‎ N Related Tracks ‎ Creating Page about relatedTracks section of hgc/hgTrackUi current

2 October 2020

• 18:0118:01, 2 October 2020 diff hist +597‎ Otto Tracks ‎ →‎Overview

22 September 2020

• 15:3915:39, 22 September 2020 diff hist +1,069‎ Otto Tracks ‎ Add section on bigBed otto tracks

16 April 2020

• 15:2515:25, 16 April 2020 diff hist −12‎ Demo sandbox ‎No edit summary

1 February 2019

• 19:4019:40, 1 February 2019 diff hist +25‎ GBiC Testing ‎No edit summary

19 March 2018

• 20:2520:25, 19 March 2018 diff hist +2,347‎ Installing and testing previous CGI versions ‎ Adding some formatting and information about TrackCheck
• 17:5717:57, 19 March 2018 diff hist +2,269‎ N Installing and testing previous CGI versions ‎ Running a VM with old source code

17 January 2018

• 16:5116:51, 17 January 2018 diff hist +94‎ m Push Shepherd Responsibilities ‎ →‎Push to rest of the RR, hgwbeta-public, and euronode: Adding section about checking each rr machine individually

7 December 2017

• 21:5721:57, 7 December 2017 diff hist −9‎ m Push Shepherd Responsibilities ‎ →‎tableDescriptions
• 21:5721:57, 7 December 2017 diff hist +10‎ m Push Shepherd Responsibilities ‎ →‎tableDescriptions: test edit after upgrade

5 December 2017

• 17:0017:00, 5 December 2017 diff hist +133‎ m Outdated instructions for releasing an assembly ‎ →‎Make sure no tables need to be repushed from hgwdev to hgwbeta: Adding awk for extracting tables needing to be repushed

15 November 2017

• 20:1020:10, 15 November 2017 diff hist +54‎ m GenBank QA ‎ →‎doGenbankTests: Don't worry about gbSanity anymore.
• 20:0920:09, 15 November 2017 diff hist −89‎ m Outdated instructions for releasing an assembly ‎ →‎Review all tracks in the sub-pushQ: Removing gbSanity check after Braney said not to do it anymore.

2 November 2017

• 17:1817:18, 2 November 2017 diff hist +5‎ m Outdated instructions for releasing an assembly ‎ →‎Turn on GenBank updates
• 17:1617:16, 2 November 2017 diff hist +3‎ m Outdated instructions for releasing an assembly ‎ →‎Turn on genbank updates on the RR
• 17:1517:15, 2 November 2017 diff hist +74‎ m Outdated instructions for releasing an assembly ‎ →‎Check that Genbank is running on the RR: Genbank updates run once a week now on the rr

1 November 2017

• 20:5820:58, 1 November 2017 diff hist −281‎ m Outdated instructions for releasing an assembly ‎ →‎Turn on genbank updates on the RR: Braney says we don't need to tell him to reinstall binaries anymore.

25 October 2017

• 15:0815:08, 25 October 2017 diff hist +149‎ m Assembly QA Part 1 DEV Steps ‎ →‎Dev: Gateway: Organism image check: Adding steps to get a new image to show up on dev. They require the file to be committed or make will not pick them up.
• 15:0415:04, 25 October 2017 diff hist −19‎ m Assembly QA Part 1 DEV Steps ‎ →‎Dev: Gateway: Check default tracks: Fixing typo introduced while fixing last typo
• 15:0315:03, 25 October 2017 diff hist +91‎ m Assembly QA Part 1 DEV Steps ‎ →‎Dev: Gateway: Check default tracks: Fixing some typos in the default position editing trackDb steps
• 14:5914:59, 25 October 2017 diff hist +235‎ m Assembly QA Part 1 DEV Steps ‎ →‎Dev: Check that BLAT Server is running: Giving alternative to copyHgcentral program since it creates way too many temporary files
• 14:5614:56, 25 October 2017 diff hist +112‎ m Assembly QA Part 1 DEV Steps ‎ →‎Dev: Gateway: Check default position: Changing beta->dev and giving example mysql command to update default position

4 October 2017

• 22:4122:41, 4 October 2017 diff hist 0‎ m Big Bed/Wig QA ‎ →‎featureBits: woops said featureBits was faster when it's actually slower
• 22:4022:40, 4 October 2017 diff hist +820‎ m Big Bed/Wig QA ‎ →‎validateFiles: Adding example validateFiles loop for checking many bigBeds at once

3 October 2017

• 22:5022:50, 3 October 2017 diff hist +1,134‎ m Big Bed/Wig QA ‎ →‎featureBits: adding faster awk command in place of featureBits

25 September 2017

• 22:0922:09, 25 September 2017 diff hist +25‎ m Big Bed/Wig QA ‎ →‎positionalTblCheck and checkTableCoords