Opsin evolution: update blog: Difference between revisions
From genomewiki
Jump to navigationJump to search
Tomemerald (talk | contribs) No edit summary |
Tomemerald (talk | contribs) No edit summary |
||
| Line 1: | Line 1: | ||
This cluster of web articles on opsin evolution is updated almost daily. Because those changes are hard to track systematically, this simple blog of significant changes may be helpful. | This cluster of web articles on opsin evolution is updated almost daily. Because those changes are hard to track systematically, this simple blog of significant changes may be helpful. | ||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution Introduction to the opsin classifier and curated sequence collection] | |||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution:_alignment A massive anchored alignment of 119 opsins] | |||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution:_annotation_tricks Tutorial on gene extraction from trace reads] | |||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution:_key_critters Species with genome projects and their photoreceptors] | |||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution:_trichromatic_ancestral_mammal Color vision in the platypus and ancestral mammal] | |||
* [http://genomewiki.ucsc.edu/index.php/Opsin_evolution:_update_blog Tracking significant updates] | |||
* Informative coding indels (under development) | |||
* Intron gain and lost (under development) | |||
* The photoreceptor fossil record (planned) | |||
* Subscholarly opsin books and ill-considered evolutionary inference (planned) | |||
<pre> | <pre> | ||
Revision as of 02:14, 29 November 2007
This cluster of web articles on opsin evolution is updated almost daily. Because those changes are hard to track systematically, this simple blog of significant changes may be helpful.
- Introduction to the opsin classifier and curated sequence collection
- A massive anchored alignment of 119 opsins
- Tutorial on gene extraction from trace reads
- Species with genome projects and their photoreceptors
- Color vision in the platypus and ancestral mammal
- Tracking significant updates
- Informative coding indels (under development)
- Intron gain and lost (under development)
- The photoreceptor fossil record (planned)
- Subscholarly opsin books and ill-considered evolutionary inference (planned)
28 Nov 07: added Xenoturbella and Convoluta section to basal key critters, no opsins available 28 Nov 07: upgraded key critters with treatment of Saccoglossus 28 Nov 07: found first hemichordate opsin, put methods into detailed tutorial 28 Nov 07: received copywrite permissions for use of handdrawn invertebrate eyes illustrations 28 Nov 07: added jump navigation to key critters as article is getting fairly long 27 Nov 07: added scallop Go opsins from an important historic study 27 Nov 07: reorganized curated sequences into deuterostome, ecdysozoa, and lophotrochozoa blocks sorted by receptor type.
