DanRer7 conservation alignment
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see also
- Zebrafish 8-way DanRer7 Genome size statistics
- Zebrafish 8-way DanRer7 conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| UCSC db name |
Scientific name |
Common name |
assembly date |
source version |
Repeat Masker |
Window Masker |
chain on danRer7 |
% of danRer7 matched (chainLink table) |
|
|---|---|---|---|---|---|---|---|---|---|
| 01 | danRer7 | Danio rerio | Zebrafish | Jul. 2010 (Zv9/danRer7) | Wellcome Trust Sanger Institute Zv9 (GCA_000002035.2) | 2010-12-03 | N/A | N/A | N/A |
| 02 | gasAcu1 | Gasterosteus aculeatus | Stickleback | Feb. 2006 (Broad/gasAcu1) | Broad Institute gasAcu1 (1.0) (NCBI project 13579, AANH01000000) | 2009-08-15 | 2009-08-15 | 2010-12-17 | 10.270% |
| 03 | oryLat2 | Oryzias latipes | Medaka | Oct. 2005 (NIG/UT MEDAKA1/oryLat2) | NIG and Tokyo Univ MEDAKA1 (NCBI project 16702, BAAF04000000) | 2009-08-15 | 2009-08-15 | 2010-12-17 | 10.032% |
| 04 | tetNig2 | Tetraodon nigroviridis | Tetraodon | Mar. 2007 (Genoscope 8.0/tetNig2) | Genoscope Tetraodon v8.0 (NCBI project 12350, CAAE01000000) | 2010-06-07 | 2009-09-02 | 2010-12-17 | 6.273% |
| 05 | fr2 | Takifugu rubripes | Fugu | Oct. 2004 (JGI 4.0/fr2) | JGI V4.0 | 2009-08-14 | 2009-08-14 | 2010-12-21 | 7.363% |
| 06 | xenTro2 | Xenopus tropicalis | X. tropicalis | Aug. 2005 (JGI 4.1/xenTro2) | JGI v4.1 | 2009-08-16 | 2009-09-02 | 2010-12-17 | 6.428% |
| 07 | mm9 | Mus musculus | Mouse | July 2007 (NCBI37/mm9) | NCBI Build 37 | 2009-08-14 | N/A | 2010-12-17 | 5.104% |
| 08 | hg19 | Homo sapiens | Human | Feb. 2009 (GRCh37/hg19) | GRCh37 Genome Reference Consortium Human Reference 37 (GCA_000001405.1) | 2009-08-15 | N/A | 2010-12-20 | 6.151% |
