User contributions for Cath Tyner
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25 January 2018
- 00:3100:31, 25 January 2018 diff hist +2,187 Genes in gtf or gff format Adding example for perl script to replace the "gene ID" with the Ensembl ID, which is named "transcript_id."
18 January 2018
- 16:4116:41, 18 January 2018 diff hist +210 Building a new genome database Adding urls that an user missed for step 8, MLQ RM #20842
17 January 2018
- 00:3400:34, 17 January 2018 diff hist −56 m Spreadsheet links to Genome Browser views No edit summary
- 00:3300:33, 17 January 2018 diff hist +309 m Spreadsheet links to Genome Browser views No edit summary
22 December 2017
- 17:2017:20, 22 December 2017 diff hist +209 m Genes in gtf or gff format No edit summary
6 December 2017
- 23:2023:20, 6 December 2017 diff hist −2 m Presentations →2017
- 23:1923:19, 6 December 2017 diff hist +95 Presentations Adding YouTube presentation recording for Jorge's browser map talk
5 December 2017
- 17:4517:45, 5 December 2017 diff hist +94 m Assembly Hubs →Testing with gfClient
- 17:4417:44, 5 December 2017 diff hist +7 m Assembly Hubs →Testing with gfClient
- 17:4317:43, 5 December 2017 diff hist +689 Assembly Hubs →Testing with gfClient: Adding another example from Hiram's response to MLQ 20650
29 November 2017
- 18:0218:02, 29 November 2017 diff hist +19 m Presentations →2017
- 18:0118:01, 29 November 2017 diff hist +40 m Presentations →2017
- 18:0018:00, 29 November 2017 diff hist +148 m Presentations →2017
7 November 2017
- 15:4015:40, 7 November 2017 diff hist +2 m Finding nearby genes →"Nearest gene" script for ncbiRefSeq on hg38
3 November 2017
- 16:0316:03, 3 November 2017 diff hist +154 m Finding nearby genes →Introduction
31 October 2017
- 23:1923:19, 31 October 2017 diff hist +313 m Genes in gtf or gff format →Warning - using a non genePred table to get GTF output in the Table Browser
- 22:5822:58, 31 October 2017 diff hist +107 m Genes in gtf or gff format →Summary of limitations for Table Browser GTF output
- 22:5122:51, 31 October 2017 diff hist −401 m Genes in gtf or gff format →Warning - using a non genePred table to get GTF output in the Table Browser
- 22:1822:18, 31 October 2017 diff hist +35 m Genes in gtf or gff format →Warning - using a non genePred table to get GTF output in the Table Browser
- 22:0722:07, 31 October 2017 diff hist −1 m Genes in gtf or gff format →Warning - using a non genePred table to get GTF output in the Table Browser
- 22:0622:06, 31 October 2017 diff hist −7 m Genes in gtf or gff format →Summary of limitations for Table Browser GTF output
- 22:0522:05, 31 October 2017 diff hist +10 m Genes in gtf or gff format No edit summary
- 22:0522:05, 31 October 2017 diff hist +1,992 m Genes in gtf or gff format No edit summary
- 21:4021:40, 31 October 2017 diff hist +185 m Genes in gtf or gff format →Summary of limitations for Table Browser GTF output
29 August 2017
- 21:1421:14, 29 August 2017 diff hist −77 Assembly Hubs →Overview
- 21:1321:13, 29 August 2017 diff hist −71 Assembly Hubs →Overview
- 21:1321:13, 29 August 2017 diff hist +148 Assembly Hubs No edit summary
10 August 2017
- 21:5121:51, 10 August 2017 diff hist +29 m Genes in gtf or gff format →Get a genePred file from UCSC MySQL public databases, then convert to GTF
- 21:5021:50, 10 August 2017 diff hist −111 m Genes in gtf or gff format →Get a genePred file from UCSC MySQL public databases, then convert to GTF
- 21:4921:49, 10 August 2017 diff hist +397 Genes in gtf or gff format →Get a genePred file from UCSC MySQL public databases, then convert to GTF
- 21:4721:47, 10 August 2017 diff hist +1,392 Genes in gtf or gff format No edit summary
8 August 2017
- 20:0720:07, 8 August 2017 diff hist −2 m Genes in gtf or gff format →Example to compare Table Browser GTF output with genePredToGtf utility output
- 18:2918:29, 8 August 2017 diff hist +14 m Genes in gtf or gff format →Summary of limitations for Table Browser GTF output
- 18:2818:28, 8 August 2017 diff hist −26 m Genes in gtf or gff format →Summary of limitations for Table Browser GTF output
- 18:2618:26, 8 August 2017 diff hist +464 Genes in gtf or gff format No edit summary
- 18:1718:17, 8 August 2017 diff hist +4,446 Genes in gtf or gff format Adding TB vs utility example
14 July 2017
- 16:3816:38, 14 July 2017 diff hist −12 m Table Browser URL No edit summary current
30 May 2017
- 16:2816:28, 30 May 2017 diff hist +188 m Finding nearby genes →Alternatives
28 May 2017
- 13:3113:31, 28 May 2017 diff hist +15 m Finding nearby genes →Script for ncbiRefSeq on hg38
- 13:3013:30, 28 May 2017 diff hist +15 m Finding nearby genes →Script for refGene on hg19
- 13:3013:30, 28 May 2017 diff hist +15 m Finding nearby genes No edit summary
- 13:2813:28, 28 May 2017 diff hist +65 m Finding nearby genes →Script for ncbiRefSeq on hg38
- 13:2813:28, 28 May 2017 diff hist +64 m Finding nearby genes →Script for refGene on hg19
- 13:2713:27, 28 May 2017 diff hist +78 m Finding nearby genes →Script for knownGene on hg18
- 13:2413:24, 28 May 2017 diff hist +27 m Finding nearby genes →Script for refGene on hg19
- 13:2313:23, 28 May 2017 diff hist +90 m Finding nearby genes →Alternatives
27 May 2017
26 May 2017
- 21:2521:25, 26 May 2017 diff hist +37 m Finding nearby genes →Alternatives
- 21:2421:24, 26 May 2017 diff hist +160 Finding nearby genes →Alternatives
- 21:2021:20, 26 May 2017 diff hist −97 m Finding nearby genes →Alternatives
