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  • GI2012TrackHubsPoster
    =Remote Data Track Storage for Viewing on the UCSC Genome Browser = = Introduction to Track Data Hubs =
    1 KB (180 words) - 21:08, 23 April 2013
  • ASHG2014
    For more information about Track Data Hubs see this article. [http://bioinformatics.oxfordjournals.org/content/30/7/10 For more information about Assembly Hubs see this wiki page: [http://genomewiki.ucsc.edu/index.php/Assembly_Hubs]
    624 bytes (98 words) - 16:43, 19 October 2014
  • G10K2015
    For more information about Track Data Hubs see this article. [http://bioinformatics.oxfordjournals.org/content/30/7/10 For more information about Assembly Hubs see this wiki page: [http://genomewiki.ucsc.edu/index.php/Assembly_Hubs]
    630 bytes (100 words) - 23:28, 25 February 2015
  • Category:Assembly/Track Hubs
    Information to help create Assembly and Track Hubs
    8 members (0 subcategories, 0 files) - 21:01, 23 April 2013
  • File:BoG2011.pdf
    UCSC Genome Browser Track Data Hubs poster: Biology of Genomes, CSHL, 2011.
    (11.08 MB) - 23:22, 15 September 2011
  • GI2013
    Assembly Data Hubs support viewing any sequence on the UCSC Genome Browser. Assembly Data Hubs allow anyone to use the UCSC Genome Browser to view
    3 KB (479 words) - 13:56, 1 November 2013
  • Custom Track Storage
    ...o the genome browser. The preferred system for doing this is called "track hubs", stored on user's own webserver. The older system for adding tracks is cal ...ks have an entry "ctfile_<db>" for every database with at least one custom track in the cart, e.g. "ctfile_hg19". An example file name is "ctfile_hg19 ../tr
    1 KB (192 words) - 16:23, 7 December 2018
  • Public Hub Guidelines
    ...are trying to create [https://genome.ucsc.edu/cgi-bin/hgHubConnect Public Hubs]. If you’ve created a hub that you feel meets these requirements and is o (As a reference for interpreting trackDb.txt settings use the ''Hub Track Database Definition'' [http://genome.ucsc.edu/goldenPath/help/trackDb/track
    16 KB (2,420 words) - 23:28, 22 February 2023
  • Window Masker
    Construct bigBed file to display in a track/assembly hub genome browser. The track hub trackDb.txt entry is:
    4 KB (534 words) - 21:04, 23 April 2013
  • Genscan
    ==Big Bed track hub files== Your track hub trackDb.txt stanzas:
    4 KB (578 words) - 21:02, 23 April 2013
  • Web Services & Javascript
    ...ually a row in a track table. A relationship links together fields in the track/table rows. === Abstract notion of a data track ===
    6 KB (997 words) - 19:18, 20 January 2010
  • Browser Track Construction
    Track hub trackDb.txt entries: track assembly_
    6 KB (966 words) - 21:01, 23 April 2013
  • Other genome browsers
    ...not on the main UCSC Browser, but mostly also contained in the Track Data Hubs at UCSC. * [http://old-gander.wustl.edu/gonramphubs/index.html various hubs] At WashU for: <I>Amazona vittata</I> (Puerto Rican Parrot), <I>Chlamydomon
    8 KB (1,205 words) - 17:51, 14 February 2018
  • HGV2011
    ...y are too wide for your window, try clicking the "resize" button below the track image. * UCSC Genome Browser Data Hubs. Zweig AS ''et al.'' Biology of Genomes, 2011 [http://users.soe.ucsc.edu/~a
    3 KB (381 words) - 00:23, 1 September 2018
  • Video Guide for New Users
    ::* The Genome Browser User Guide has more information on Annotation track descriptions. ::* The track search help page has information on searching tracks
    12 KB (1,969 words) - 16:01, 6 October 2020
  • TRF Simple Repeats
    ==Construct bigBed track files== the item in the track:
    6 KB (847 words) - 20:36, 2 July 2015
  • CPG Islands
    ==Track hub trackDb.txt== track cpgIslandExt_
    5 KB (680 words) - 21:02, 23 April 2013
  • Main Page
    ....edu/goldenPath/help/hgTracksHelp.html#CustomTracks How to create a custom track] * [[GBiB: From download to BLAT at assembly hubs]]
    5 KB (773 words) - 21:15, 26 February 2019
  • GBiB: From download to BLAT at assembly hubs
    ...ge explains how to install, configure and maintain an assembly hub (with a track hub and BLAT) using GBiB on a laptop running Kubuntu 19.10 (Eoan Ermine). M ** General ---> Description: Ebola virus genome assembly and track hubs.
    23 KB (3,233 words) - 19:38, 25 June 2021
  • BoG2013VariationPoster
    ...ool will have a place to paste in input data instead of uploading a custom track, and it will also accept a list of rsIDs. ...osition specified. Custom tracks in VCF format that are loaded into track hubs are also supported as input.
    10 KB (1,562 words) - 07:51, 1 September 2018

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