User:Kate: Difference between revisions
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I've been a | I've been a genome browser software developer at UCSC since April 2003. | ||
Before that, I worked in the software industry for several decades, | Before that, I worked in the software industry for several decades, | ||
working primarily in scientific and technical applications areas. | working primarily in scientific and technical applications areas. | ||
Revision as of 20:25, 1 September 2006
I've been a genome browser software developer at UCSC since April 2003. Before that, I worked in the software industry for several decades, working primarily in scientific and technical applications areas. It's great to be able to apply my Unix/C/programming expertise to my favorite application area -- Human Biology (which was actually my major in college). Unfortunately, we didn't have introns then... Kate Rosenbloom
Current Projects
- ENCODE at UCSC – I'm the UCSC staff point-person for the ENCODE Project
- Custom tracks management interface – allows users to add/remove/update/doc
- ENCODE MSA tracks – 23-species aligned with 3 algorithms, nearly ready to release
- Comparative genomics track enhancements – alternate conservation scores, chain/net mega-tracks
- Composite track features – multiple configuration panels for mixed-types
Past Projects
- Chimpanzee genome browsers
- Composite track implementation
- Multiple alignments and conservation scoring
- ENCODE orthologous region sequences
- Coordinate conversion web utility (hgLiftOver)
- Conservation track display
- Fugu genome browser
