User:Kate

I've been a UCSC staff genome browser software developer since April 2003. Before that, I worked in the software industry for several decades, working primarily in scientific and technological applications areas. It's great to be able to apply my Unix/C/programming expertise to my favorite application area -- Human Biology (which was actually my major in college). Unfortunately, we didn't have introns then... Kate Rosenbloom

Current Projects

• ENCODE at UCSC – I'm the UCSC staff point-person for the ENCODE Project
  

• Custom tracks management interface – allows users to add/remove/update/doc
• Comparative genomics track enhancements - chain/net mega-tracks, alternate conseravation scores
• ENCODE MSA tracks – 23-species aligned with 3 algorithms, nearly ready to release
• Composite track features – multiple configuration panels for mixed-types

Past Projects

• Chimpanzee genome browsers
• Composite track implementation
• Multiple alignments and conservation scoring
• ENCODE orthologous region sequences
• Coordinate conversion web utility (hgLiftOver)
• Conservation track display
• Fugu genome browser