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  1. .plan
  2. 2008-08-archive
  3. Advanced Cell Browser Topics
  4. All.joiner problem
  5. Apache error log output
  6. Archived assemblies
  7. Assembly QA Jupyter
  8. Assembly QA Part 1 DEV Steps
  9. Assembly QA Part 2 Track Steps
  10. Assembly QA Part 3 BETA Steps
  11. Assembly QA Part 4 RR Steps
  12. Assembly Release QA Steps
  13. Big Bed/Wig QA
  14. BlastTabs
  15. Browser Outreach
  16. Building GenArk genomes
  17. CBSE citation format
  18. CGI Build Process
  19. CGI Build Schedule
  20. CGI Testing
  21. CGI testing responsibilities
  22. Cell Browser Release Process
  23. Cell Browser best practices
  24. Cell Browser data flow and architecture
  25. Cell Browser dataset versioning
  26. Cell Browser filters
  27. Cell Browser scripts
  28. Cell Browser testing
  29. Cell Browser wrangling guided examples
  30. Certbot
  31. Chains and Nets QA
  32. Changes to cv.ra
  33. Checking RR status through hgTracksRandom
  34. Cherry-picking a change in git
  35. Code summary
  36. Commit access
  37. Conservation Track QA
  38. Creating a pushQ Entry
  39. Crispr QA
  40. Curated Hubs
  41. Custom Track Examples
  42. Custom trash database machine
  43. Data Hub Feedback
  44. Demo Sandbox
  45. Demo sandbox
  46. Details pages -- conventions
  47. ENCODE Data Wrangler HOWTO
  48. ENCODE Pre-QA
  49. ENCODE QA
  50. ENCODE QA Checklist
  51. Editing the Cell Browser docs
  52. Editing the human trackDb.ra file
  53. Editing trackDb.chainNet.ra
  54. Email templates
  55. Emergency Backup BLAT Servers
  56. Ensembl Links
  57. Ensembl QA
  58. Euronode
  59. Events
  60. ExonMostlyDesignMeeting 11-19-14
  61. ExonMostlyInitialDesignMeeting
  62. ExonMostlyInitialDesignMeetingWhiteboard
  63. Finding archive datasets for the Cell Browser
  64. Frequently asked mailing list questions
  65. Fulltext retrieval software
  66. GBi* Release Process
  67. GBiB Testing
  68. GBiC Testing
  69. GENCODEqa
  70. GRC Patch Release
  71. Gbib auto updates
  72. Gbib development
  73. Gbib release
  74. Gbib updates
  75. GenBank QA
  76. GenbankAlignments
  77. GenbankServiceLog
  78. Genbank updates
  79. Generating coordinates using cbScanpy
  80. Genome-preview machine
  81. GenomeCloud
  82. Genome Browser Grant Proposal for 2017-2022
  83. Genome Browser in a Box config
  84. Getting started with Cell Browser wrangling
  85. Git shared repository
  86. Google Calendar
  87. HTML and CSS
  88. HgTablesTest details
  89. HgTracks multi-region changes
  90. Installing and testing previous CGI versions
  91. Internet browser testing
  92. It's a long way to the RR
  93. KnownGene
  94. KnownGene build
  95. LinkOut from NCBI
  96. Main Page
  97. MakePushQSql.pl
  98. Make your own virtual space
  99. Making a hub for a cell browser
  100. Managing cellbrowser.conf tag values for multiple datasets
  101. Markdown resources
  102. Minimal browser
  103. Monitoring Tasks
  104. Monitoring Tasks Notes
  105. Moving a Branch Tag
  106. MySQL Commands
  107. NAR Paper
  108. NewMenu
  109. New track checklist
  110. Old ENCODE QA
  111. Otto Tracks
  112. Outdated instructions for releasing an assembly
  113. PMCID
  114. Parasol how to
  115. Patching a Branch
  116. Popular Links
  117. Post-Release-Checklist
  118. Posters
  119. Pre-QA
  120. Pre-pushq checklist
  121. Preparing VirtualBox images
  122. Public Hub Guidelines
  123. Public Hub QA
  124. Push-Request Etiquette
  125. PushQ new user
  126. Push Shepherd Responsibilities
  127. Pushing Static Docs (htdocs)
  128. Pushing trackDb
  129. QA Checklist for Cancer Browser
  130. QA Home Page
  131. QA Python Tools
  132. QA Track Checklist
  133. QA scripts
  134. QAing Gencode Genes
  135. QAing UCSC Genes
  136. RR Down: Sending Alert Messages about Genome Browser Being Offline
  137. Recommended Track Sets
  138. Related Tracks
  139. Renaming a Cell Browser dataset
  140. Replacing old tables with new ones
  141. Requests for liftOver files
  142. Revert Git Change
  143. Running joinerCheck for all databases
  144. SNP Track QA
  145. Sample .bashrc
  146. ScATAC-seq in the Cell Browser
  147. Scripting standards
  148. Search robot
  149. Selenium
  150. Selenium python GBiB script
  151. Setting up rclone for the Cell Browser
  152. Single cell browsers
  153. Slowness
  154. Ssh authentication setup
  155. Static Page JS Protocol
  156. Static Page Protocol
  157. Static content for new assemblies
  158. Subtrack Configuration
  159. System Architecture Map
  160. The Pubs pipeline
  161. Track Hub Example
  162. Track QA Guidelines
  163. Training new Browser Engineers
  164. Training new Browser Staff
  165. Trash cleaners
  166. UCSC Genes Staging Process
  167. UCSC Genes tables
  168. UI with ReactJS and ImmutableJS
  169. UNIX Commands
  170. URLs for Details Pages
  171. Updating QA crontabs
  172. Updating blat servers
  173. Upgrading gfServer
  174. Usage Statistics
  175. V154 Release
  176. VI quick start
  177. VariantAnnotationTool
  178. Versioned Track Hubs
  179. Welcome to Browser Staff
  180. Windows testing machine
  181. Wrangling process
  182. Writing code summaries
  183. Zotero Citation tool

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